Basic Information | |
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IMG/M Taxon OID | 3300001676 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0096894 | Gp0056629 | Ga0012486 |
Sample Name | Black smokers hydrothermal plume microbial communities from Tui Malila, Lau Basin, Pacific Ocean |
Sequencing Status | Permanent Draft |
Sequencing Center | |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 107945955 |
Sequencing Scaffolds | 34 |
Novel Protein Genes | 35 |
Associated Families | 31 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus | 1 |
All Organisms → cellular organisms → Bacteria | 2 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique | 4 |
Not Available | 14 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium | 1 |
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium | 2 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2 |
All Organisms → cellular organisms → Bacteria → Proteobacteria | 1 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium | 1 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter | 3 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063 | 1 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 1 |
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Black Smokers Hydrothermal Plume Microbial Communities From Tui Malila, Lau Basin, Pacific Ocean |
Type | Environmental |
Taxonomy | Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume → Black Smokers Hydrothermal Plume Microbial Communities From Tui Malila, Lau Basin, Pacific Ocean |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | marine black smoker biome → black smoker → sea water |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Subsurface (non-saline) |
Location Information | ||||||||
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Location | Tui Malila, Lau Basin, Pacific Ocean | |||||||
Coordinates | Lat. (o) | -21.99002 | Long. (o) | -176.568744 | Alt. (m) | N/A | Depth (m) | 2000 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F001756 | Metagenome / Metatranscriptome | 641 | Y |
F005783 | Metagenome / Metatranscriptome | 390 | Y |
F006552 | Metagenome | 370 | Y |
F007828 | Metagenome | 344 | Y |
F011448 | Metagenome | 291 | Y |
F019844 | Metagenome | 227 | N |
F026708 | Metagenome / Metatranscriptome | 197 | Y |
F030294 | Metagenome | 186 | Y |
F032684 | Metagenome / Metatranscriptome | 179 | Y |
F037935 | Metagenome | 167 | Y |
F038276 | Metagenome | 166 | N |
F040334 | Metagenome | 162 | Y |
F042560 | Metagenome | 158 | Y |
F042643 | Metagenome | 158 | Y |
F045995 | Metagenome | 152 | N |
F049927 | Metagenome | 146 | Y |
F061920 | Metagenome / Metatranscriptome | 131 | Y |
F065130 | Metagenome | 128 | N |
F069480 | Metagenome | 124 | N |
F080654 | Metagenome / Metatranscriptome | 115 | N |
F082562 | Metagenome | 113 | N |
F084703 | Metagenome / Metatranscriptome | 112 | Y |
F087941 | Metagenome | 110 | Y |
F089570 | Metagenome | 109 | N |
F089571 | Metagenome | 109 | N |
F094378 | Metagenome / Metatranscriptome | 106 | Y |
F095627 | Metagenome | 105 | Y |
F096028 | Metagenome | 105 | Y |
F097497 | Metagenome / Metatranscriptome | 104 | Y |
F105349 | Metagenome / Metatranscriptome | 100 | N |
F105882 | Metagenome | 100 | Y |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
TuiMalila_1001048 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus | 9663 | Open in IMG/M |
TuiMalila_1001577 | All Organisms → cellular organisms → Bacteria | 7815 | Open in IMG/M |
TuiMalila_1003394 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique | 5131 | Open in IMG/M |
TuiMalila_1004453 | Not Available | 4398 | Open in IMG/M |
TuiMalila_1004719 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique | 4242 | Open in IMG/M |
TuiMalila_1005200 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium | 6732 | Open in IMG/M |
TuiMalila_1005733 | All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium | 3754 | Open in IMG/M |
TuiMalila_1005992 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 3658 | Open in IMG/M |
TuiMalila_1007020 | Not Available | 3313 | Open in IMG/M |
TuiMalila_1008523 | Not Available | 2925 | Open in IMG/M |
TuiMalila_1008525 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2925 | Open in IMG/M |
TuiMalila_1008770 | Not Available | 2872 | Open in IMG/M |
TuiMalila_1008908 | All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium | 2845 | Open in IMG/M |
TuiMalila_1009917 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique | 2655 | Open in IMG/M |
TuiMalila_1010585 | Not Available | 2545 | Open in IMG/M |
TuiMalila_1010997 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium | 2485 | Open in IMG/M |
TuiMalila_1011172 | All Organisms → cellular organisms → Bacteria | 2457 | Open in IMG/M |
TuiMalila_1012914 | Not Available | 2230 | Open in IMG/M |
TuiMalila_1016250 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique | 1904 | Open in IMG/M |
TuiMalila_1017934 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter | 1782 | Open in IMG/M |
TuiMalila_1019714 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063 | 1667 | Open in IMG/M |
TuiMalila_1020048 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1649 | Open in IMG/M |
TuiMalila_1023789 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter | 1446 | Open in IMG/M |
TuiMalila_1026451 | Not Available | 1328 | Open in IMG/M |
TuiMalila_1026960 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter | 1855 | Open in IMG/M |
TuiMalila_1028610 | Not Available | 1246 | Open in IMG/M |
TuiMalila_1029075 | Not Available | 1229 | Open in IMG/M |
TuiMalila_1032445 | Not Available | 1122 | Open in IMG/M |
TuiMalila_1032599 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 1118 | Open in IMG/M |
TuiMalila_1033296 | Not Available | 1096 | Open in IMG/M |
TuiMalila_1034720 | Not Available | 1056 | Open in IMG/M |
TuiMalila_1035963 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium | 1023 | Open in IMG/M |
TuiMalila_1036073 | Not Available | 1020 | Open in IMG/M |
TuiMalila_1036982 | Not Available | 1743 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
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TuiMalila_1001048 | TuiMalila_100104812 | F038276 | MNLDFLLRLTNYVNICKQIYLAVIKQFLTVLVIINHACVLLHGNHNYKDVFYDRLSNQYIRNACDFHNLHISYNNLGLVLEKFLLYIKIINNKV* |
TuiMalila_1001577 | TuiMalila_10015773 | F089571 | MLKKIIVIVFSVLFLVVPASSQHVQQKYAITDKDEKVILNDNGTWEYAEEDKQNYYYKKVPPKTYNYEFKSQTWEERLEQAAHEYWRIRAHAELEQLGIPVTRYDPTTSDVPLYLKLEGGRIRTDFDSFTPLAKGEVIDISGLWDPDKGDNPTLKIQGKLFLQITMKLDDQKKLFSQYNQRNYIPIPDDFQRILEFRDSLDVISLGMHDYNRDNTHIWPGIPHSFLYAPPGSYYDPNNPPIIHGDGFPYIQRGHLTLARREIPMTNSVYDNLLKRIDNLEGHGPIKIRYDMGKGIIETVTFEEVWLKINPYNGDPTHILKKVSLNKLE* |
TuiMalila_1003394 | TuiMalila_10033941 | F094378 | DQFNWRRRSNHPGNSQAKGPYIITLERRLGLTEGVNLSGNKTEGVD* |
TuiMalila_1004453 | TuiMalila_10044534 | F080654 | VVAEVISEETAESEPVGKTDLEERQNLWNKIQKFDPEASAMDYYDNNEWDLEKMRSDLKVLLEKEKFGR* |
TuiMalila_1004719 | TuiMalila_10047191 | F037935 | STPIAKKTVLLLFIFEVGGYLKIFEIQHNKPLLYLYFTYEI* |
TuiMalila_1005200 | TuiMalila_100520011 | F007828 | MLNGITNVVRSNQNAVMVRVGDSTSAVYTIFDLRTQSNTYTGSLNAVKKAWNRHYRNSRQFVTRSGSNHRYMGA* |
TuiMalila_1005733 | TuiMalila_10057335 | F030294 | MTRRMVTPHPSITGMAAGFSLVDDLNAGDVVGKALGGNLSQALNGLSANAQGLIKTDAGRKSLVQAVGIAAIGAWARKALPATKIGGTKLYFRI* |
TuiMalila_1005992 | TuiMalila_10059923 | F089570 | MQNHCFKFLFFFFCILFLNTKFPLSESERPSLDFNEKQKTIVSNALSNCGDYNFDDLLNTRKKELGISEPDKSINKKKQLDNSLGIEVSRSIETIYTPEQSLANVKKILSSINDDRLYPAVAYYIIKDFAFYEHGLCKSLRNHFQTYNIYKEFYFKTKNKELDPIYENENNLNFFYKNTSNARKRLLLAIQSKKRLLEKEQFLLKNLKIFTETYI* |
TuiMalila_1007020 | TuiMalila_10070202 | F087941 | MPEHHEHDEESFPEQLKRLLIDNAFAFTIGWLVGRGYVIDLLSDIAGALT* |
TuiMalila_1008523 | TuiMalila_10085232 | F105349 | MKTLVFQSKIGDGSLSWEDNRNMSQLKIDHLIIENCLSSVRSWCKRLGYEYKLVTQDLKWNFEFLSKNDVQLNCAFQNWEHLPKEGYDQIIYLDNDVFVFEYSGPPPMVDFGLVCRFGDQTQYAKHYCGNDSLWWNSGVIVMSQERCRHLSNWMLDYIPRARELSLFRDLPREESLITEYCAKYKPTKLAPIWNTMPPQTPIPMYSDAKFIHLLGTSKLNTLLKCPKEIQKVIMKNIDDSEKITA* |
TuiMalila_1008525 | TuiMalila_10085257 | F097497 | MPKKPRKPTTPKQRDPSWQLRHALGYKVEPDKMCYTRKQKHPKPVEVTTKY* |
TuiMalila_1008770 | TuiMalila_10087701 | F096028 | SHITISVDFRVDWASFELIDGDFHSHSFGERGDWNDSMLDEN* |
TuiMalila_1008908 | TuiMalila_10089082 | F082562 | MNKLILSILITLSTVLFAQAKESSNNYFLNIELSLIHPILGGFGGTVGIEKNHFSYGLNSFGTKLNHMTKHYLLENAEELAVYNWGIELYSDYYFEQNHTGLFLGLILSLNGFRFNDIPNPQTILVLYSVPRIGYRIYLPKKLKSFYIQYSLTTHFKVWDNEKRFLYQEIDTKSIFLISQLTLGMKS* |
TuiMalila_1009917 | TuiMalila_10099171 | F042560 | FFIFAPSVKLKKKGKVPIVSIVTKNNIKEFMKVAVMLVFHISSWQ* |
TuiMalila_1010585 | TuiMalila_10105851 | F065130 | MSRTRRSAQELIEESEARLAKLREKAALDQAKQSPELAPIVEAIKENSEAITESQRGLGAGPQSFESRAAKHEAWLEEITAAEDLAELILAQAQERKDYLTSALAYMAQSVFEGKDISVDILETLASIPTSPVLEDAMIKY |
TuiMalila_1010997 | TuiMalila_10109973 | F040334 | MPSNAPDLNFGPSERFLPGNKLAEGDVIKMNILDFEKEEVDTDYGSKFQFYLNILSSSTDVVSLGKYTWRTRARAPRKVHAYWVKQKTDVSEFSHWVWQLKVVEYGYSLKTLNSSSAQSKDIIKDGTHVPGHGAAGDGES* |
TuiMalila_1011172 | TuiMalila_10111723 | F040334 | MSSETPKLNFGPSERYLPGKKLVEGDVLKINILDFESEEVDTDFGSKLEFHLNVLSSSTDVVSPGKYTWRTVAAAARKVHAYLSGEVSEHAATWVWQLTVVENGVSLKTLNSDPDPSEDTTKHGTPGPGNTTAGDGEA* |
TuiMalila_1012914 | TuiMalila_10129141 | F011448 | MAYNIKDVFYLDTSVTIAAATAAGGVGQLDLSAYIDPIARGRTKGTGLGIYKVHWNVMRSGDDSDPIDDAEVGEFSFGLLAGFGSGDIATGGANMSDTAFSNTNNLLISSGQFYGPKSTVANASTPMNWFPNIMVEPSIEVPYVVVRDNVCLCYQIHTNMTSATHLSIRMEVAQLTLDQATLNQLLRTQTV* |
TuiMalila_1016250 | TuiMalila_10162501 | F049927 | PTTDKAVGNVDKDFIEVICDPIIPLKKTVIILAVNPKT* |
TuiMalila_1017934 | TuiMalila_10179341 | F037935 | STPIAKKTVLLLFIFEVGGYLKIFEIQHNKTLLYLYFTYEI* |
TuiMalila_1019714 | TuiMalila_10197141 | F001756 | SFLILGLNIPKKKLCPKLEKNVKIKPNIITFKLKLLNIFFYDL* |
TuiMalila_1019736 | TuiMalila_10197361 | F095627 | IENKPMDEEIIKNHKDNPAVTAAALNLGDDSSILNRINECYKTALC* |
TuiMalila_1020048 | TuiMalila_10200481 | F026708 | KKPTKNRTELKVNGPILSIPVSWAMNVVPHIKEQASRQENDTVFFIEEDLYR* |
TuiMalila_1023789 | TuiMalila_10237891 | F094378 | YGRDQFNWRRRSNHPGNSQAKGPYIITLESRLSLTEGVNLSGN* |
TuiMalila_1026451 | TuiMalila_10264512 | F084703 | TFKFCDAVEVLPSSLPRELFSTTAPRFLPGKLEPLGLSLPGQLRVAS* |
TuiMalila_1026960 | TuiMalila_10269603 | F032684 | MILLCTLRVLALIDKFKSNFSLFEVMFLPFGIITKNTLKNIIQPKITPTDKNANRDPKIFVKLNEITVPIMSSTTGKIILLFIYQFRLTDKIVN* |
TuiMalila_1028610 | TuiMalila_10286102 | F105882 | MSLRNRVTWDGYNFNESLADSLESALLYLRASEMGLCDLGWDDEENDLTIRWTEEGERLMREAWENKNE* |
TuiMalila_1029075 | TuiMalila_10290753 | F019844 | LFGFKDKKINKPKLTLVVNNTDNQEEKSENAYFSYYEEHFTFEEDISEEYRNELKIHLIESIENKVHPWDFEKNLDFKLKEPDQIYYLFMYCLMYIDIYEQDLFNKFTKLWYENNLDDTTKRDDEINNEALRLLKYDTLGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAYQEKVL* |
TuiMalila_1032445 | TuiMalila_10324454 | F069480 | IELIDRIYILESRNNIKRVEGNAGQILDEASKNKPYNTVKTVFFSVFKPVVFL* |
TuiMalila_1032599 | TuiMalila_10325993 | F096028 | HITISVDFRVDWASFELIDGDFHSHSFGVRVKRNDSMLEKN* |
TuiMalila_1033296 | TuiMalila_10332961 | F061920 | STQTRSEKRATCERRRHVNYLNKNGRRFLDKTPFANFIKPEKSDKSCHYEKQESIRDGLTKRLIAEEASRKNAS* |
TuiMalila_1034720 | TuiMalila_10347202 | F005783 | MPKRYLTVAADGGLSIIPEASGDDADGNKLTKTLFELSRTTDMSTHFDPAVHTREAIAAGIPGHRALALIGECEDSDLPSDRYFRNAWEWSD* |
TuiMalila_1035963 | TuiMalila_10359632 | F042643 | MAFKLKTGKTINKVLAGAGVVALLGIVGNAVAPGFMSSTMGKAVEGIAAYSIGGVESVIGAAATMFIGPGSRGSTALDNTLTQTL* |
TuiMalila_1036073 | TuiMalila_10360731 | F045995 | MWTNNIVTFYGADEDLKKVAERLYSPGVTSEEDNCFDFNKIIPIPKELYYIHFSRFNLNKKMIHGREYKQWYYVNFDGKMIEQNPDNYFEKSRLKGMSSRMKKQFMRKYGALNDSDWIAINWGTRSNSNSVSSDEFREKLVYNFRTNYGSARLIVLEIENMIYRDEFPKVKMMWEHNNVDVHICFMEDDEYVPDPTPVFTVGFAETEKSTAEYYKW* |
TuiMalila_1036982 | TuiMalila_10369823 | F006552 | MRKCNKPIPTVWEATPNVEIPLLISPVLKIKSSRINPVANIPKPIPIAKKAIDNLNNVGLAVFLNPIYEIVPITRPTKSPTRLRIISKKNSNYADSVTVLNKV* |
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