Sample 3300001475

3300001475: Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN102

Overview

Basic Information
IMG/M Taxon OID	3300001475 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0053063 \| Gp0054526 \| Ga0002509
Sample Name	Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN102
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	41193602
Sequencing Scaffolds	45
Novel Protein Genes	49
Associated Families	49

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	2
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	5
All Organisms → cellular organisms → Bacteria	9
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin222	1
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	11
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1
Not Available	8
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria → Oscillatoria acuminata	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil Microbial Communities From 10 Grassland Sites In Ca, Co, Ks, Ky, Mn, Mo, Nm, Sc, Tx, That Have Been Nitrogen Fertilized
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil → Soil Microbial Communities From 10 Grassland Sites In Ca, Co, Ks, Ky, Mn, Mo, Nm, Sc, Tx, That Have Been Nitrogen Fertilized

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	forest biome → land → fertilized soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Browns Valley, California, USA
Coordinates	Lat. (^o)	39.23550963	Long. (^o)	-121.2836963	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001752	Metagenome / Metatranscriptome	642	Y
F001974	Metagenome / Metatranscriptome	609	Y
F002774	Metagenome / Metatranscriptome	531	Y
F003319	Metagenome / Metatranscriptome	494	Y
F003605	Metagenome / Metatranscriptome	477	Y
F003843	Metagenome / Metatranscriptome	466	Y
F004019	Metagenome / Metatranscriptome	457	Y
F004492	Metagenome	436	Y
F006205	Metagenome / Metatranscriptome	379	Y
F008790	Metagenome / Metatranscriptome	328	Y
F015476	Metagenome / Metatranscriptome	254	Y
F015501	Metagenome / Metatranscriptome	254	Y
F016259	Metagenome / Metatranscriptome	248	Y
F016712	Metagenome	245	Y
F016792	Metagenome / Metatranscriptome	244	Y
F017155	Metagenome	242	Y
F019257	Metagenome / Metatranscriptome	231	Y
F019412	Metagenome / Metatranscriptome	230	Y
F019413	Metagenome	230	Y
F020261	Metagenome / Metatranscriptome	225	Y
F021355	Metagenome	219	Y
F023252	Metagenome	211	Y
F026671	Metagenome / Metatranscriptome	197	Y
F031283	Metagenome / Metatranscriptome	183	Y
F035436	Metagenome	172	Y
F037668	Metagenome	167	Y
F037912	Metagenome / Metatranscriptome	167	Y
F038475	Metagenome / Metatranscriptome	166	Y
F041056	Metagenome	160	Y
F047855	Metagenome / Metatranscriptome	149	Y
F049605	Metagenome / Metatranscriptome	146	Y
F052763	Metagenome / Metatranscriptome	142	Y
F055994	Metagenome / Metatranscriptome	138	Y
F056939	Metagenome	137	Y
F059436	Metagenome / Metatranscriptome	134	N
F062657	Metagenome / Metatranscriptome	130	Y
F063107	Metagenome / Metatranscriptome	130	Y
F063192	Metagenome / Metatranscriptome	130	Y
F063991	Metagenome / Metatranscriptome	129	Y
F067158	Metagenome	126	Y
F070275	Metagenome / Metatranscriptome	123	Y
F076435	Metagenome / Metatranscriptome	118	Y
F077733	Metagenome / Metatranscriptome	117	Y
F080312	Metagenome / Metatranscriptome	115	Y
F081317	Metagenome / Metatranscriptome	114	N
F082289	Metagenome / Metatranscriptome	113	Y
F083420	Metagenome	113	Y
F103636	Metagenome	101	Y
F105382	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGI12361J15250_1000022	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	6478	Open in IMG/M
JGI12361J15250_1000148	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2937	Open in IMG/M
JGI12361J15250_1000172	All Organisms → cellular organisms → Bacteria	2792	Open in IMG/M
JGI12361J15250_1000354	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2107	Open in IMG/M
JGI12361J15250_1000400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin222	2030	Open in IMG/M
JGI12361J15250_1000473	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1893	Open in IMG/M
JGI12361J15250_1000629	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1677	Open in IMG/M
JGI12361J15250_1000688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1603	Open in IMG/M
JGI12361J15250_1001076	Not Available	1351	Open in IMG/M
JGI12361J15250_1001094	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1342	Open in IMG/M
JGI12361J15250_1001302	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
JGI12361J15250_1001387	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
JGI12361J15250_1001665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1151	Open in IMG/M
JGI12361J15250_1001728	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	1135	Open in IMG/M
JGI12361J15250_1001819	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1107	Open in IMG/M
JGI12361J15250_1002003	Not Available	1060	Open in IMG/M
JGI12361J15250_1002450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	971	Open in IMG/M
JGI12361J15250_1003063	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	879	Open in IMG/M
JGI12361J15250_1003221	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	858	Open in IMG/M
JGI12361J15250_1003327	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
JGI12361J15250_1003448	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
JGI12361J15250_1003552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	822	Open in IMG/M
JGI12361J15250_1003574	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
JGI12361J15250_1003896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria → Oscillatoria acuminata	789	Open in IMG/M
JGI12361J15250_1003955	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	783	Open in IMG/M
JGI12361J15250_1004010	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	778	Open in IMG/M
JGI12361J15250_1004131	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	767	Open in IMG/M
JGI12361J15250_1004509	Not Available	737	Open in IMG/M
JGI12361J15250_1004627	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	728	Open in IMG/M
JGI12361J15250_1004845	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	715	Open in IMG/M
JGI12361J15250_1005132	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	699	Open in IMG/M
JGI12361J15250_1005275	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
JGI12361J15250_1005352	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
JGI12361J15250_1005611	Not Available	675	Open in IMG/M
JGI12361J15250_1005901	Not Available	661	Open in IMG/M
JGI12361J15250_1006462	Not Available	638	Open in IMG/M
JGI12361J15250_1007145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	613	Open in IMG/M
JGI12361J15250_1007908	Not Available	589	Open in IMG/M
JGI12361J15250_1007939	Not Available	587	Open in IMG/M
JGI12361J15250_1008295	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	577	Open in IMG/M
JGI12361J15250_1009822	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	540	Open in IMG/M
JGI12361J15250_1011069	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	516	Open in IMG/M
JGI12361J15250_1011528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
JGI12361J15250_1011557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
JGI12361J15250_1011814	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI12361J15250_1000022	JGI12361J15250_10000222	F003319	VRATRAIGFFAGVSAALIIVATIILRTYFRSVDQHNAMLISAGLAFAVQLGSYALLRPARRGHGAPGELMLRWGIGAVLRFAILVLYAPLARIANFSLDAALVSLVTFFFLTMMAEPLLLEYDR*
JGI12361J15250_1000022	JGI12361J15250_10000225	F015501	MNPVYRIDVARKVVLLFWSEFPTIARLREVVEQAIADPEFRPGMNFLWDRRPGDANTATIEYLREAVYYMQVMAEEIGAHAWAIVTHTPGDYGKARMLEAMTDVGKVLIRGFQSRGDAEEWLRNPVRYEPNNIHFPARSPSLMHPGYG*
JGI12361J15250_1000148	JGI12361J15250_10001484	F063991	MIGTKTLKGIALASALALGSACAGVKKTTTDINPAMNRAPTCANAIAVFNSRADVPNDYYELAWVEASGNSVWTTDNQLQTQIRNGAAKVGANAVIVNPVEQSKSTVKVLGEAVGAKSATQKASALAIYXPSDAARVTTACGT*
JGI12361J15250_1000172	JGI12361J15250_10001724	F031283	AGALTSTLTITVTPDEQYVAYKMEPAGTQFLKDVTVTQSLSATSLSGAPLRSQLYAAYIADDSVNLSGKVPVLEIEPSKTIFSPLSGLPDAQVWIIRHFSRYMLASG*
JGI12361J15250_1000354	JGI12361J15250_10003542	F003605	VAVGDAATAAGYPLVPDSGEEGKVKYGAREINRTRDIAAGLTALIPASKAAARLSAGISSGTAEPAGGIDGDIYLKILP*
JGI12361J15250_1000400	JGI12361J15250_10004003	F037912	MKMIGEPDAGNPQVRFDEGMQETCVRVARLRPTLQRP
JGI12361J15250_1000473	JGI12361J15250_10004733	F006205	MDDMKQTLDKLREELTNAGKRLAELAEKAESELPAAGKRINEEYLKLQALLDSAVEKLRN
JGI12361J15250_1000629	JGI12361J15250_10006293	F019257	VRLASRGQRDMDKGPEPILDASELGQVRRQASGVYVKAVITAVILTAIVVLL*
JGI12361J15250_1000655	JGI12361J15250_10006551	F077733	MTPIRSLALIALPLGLSGCFFATKSDFDRLQQDIVGTRATSNASDSVQRAYLVEVTRSVRTLNDSINALSRRVNSMRTATESDLAAMKEDISQLQDLSGQSEQKLRDMRAAVEEKTAQVDPSQVSDSAG
JGI12361J15250_1000688	JGI12361J15250_10006882	F063107	MVAARAGLSEFPIGDRVEADTFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDPTCGVTVAF*
JGI12361J15250_1001076	JGI12361J15250_10010762	F059436	MNRSAEDGEWSSPHSGGEGTGVPPRRTKVCAGDTVGKSVSDPGRPGIVHREGMAGIVRHSQTKGRETGNAKPGLKPPMVGADISASEGPTEAVPGVGSGRGTQERGQSKRPRIAAGRAATPVGSKRPTGGGRPRAVWQRRRATRG*
JGI12361J15250_1001094	JGI12361J15250_10010943	F016712	GGGGTGTPAIPPGIYLEFSRILDAKEPWFRGDPEIEVHIHGPTSAANPTYGDNLSCSGEHAPDYRKVFDQNGAFWEGRVMVFSGDEMVQYTNKFLEGFHVIFWEDDNEPCTLKLDSNVLVNLIQSTAAAFGSVAVKLLPKAPWTLAAGAFIATMIGTSAVWLQTNDDFLGIAVDQRQLGSPYPGNTHVIMDGQTLNGRATIVLH*
JGI12361J15250_1001302	JGI12361J15250_10013024	F023252	MIALLLALQIVGRAATAPAPTFVIVRDGATATSVPVTISAGQPTVRADALMRAMRGMLVTGTNLHYTLVLSRGRLDLIDGIPFAKLDTLTIPLSRAPQVLGGQLYLPFQFVSEVIPRYAGYVYDVAQAELRAAAGRAEPSAPTRA
JGI12361J15250_1001387	JGI12361J15250_10013872	F041056	MVRIFCAAIGLHLVLVIGSASAQQATPLKIRGDTTGAPRGCSAASGISAISAWFAAFTDADSARLAKASSTPNGRFVFSIGKFATSGTLIRGRTFDDLLAYARERARQHERMTVQEVRFNGWSGRVLQWDRLYFTRSADDLGEKPLRGVGNGGYWCRQGVWYLHLAPRPGIDAERP*
JGI12361J15250_1001665	JGI12361J15250_10016652	F016792	TVRPVRVVVLAINWTITWWVSRGLPRQVWVMKANEHDAXSGSVRPEGCRGPHHPVDPQGSMREYPVREPCPPKCCYPDMRRSNPTCEALGTTATIWEHQSGGGLAEDEWLNASERPWLRSVIENRPKVLIGRSQNGMRVGSSNGTLDDGGTVTRRTIGRSLPIRFSPLDNRVSPTRPVAARRRYPDRKAGDGGGGRGAAEQAKAAL*
JGI12361J15250_1001728	JGI12361J15250_10017281	F017155	ATILAAPLSGVGTRALQFGVIVPGTPAVTVLPNTPSGGEFRITGVKNRKSLDISFTLPTQLTGPAGASIPLSFNGNYAGLCEIDTSGVCEVASYFTWNPVTTPSFHDQPTRYKPGRPRYVYDEYQLYLGGVASPAATQRPGTYTASIGVLLVVN*
JGI12361J15250_1001819	JGI12361J15250_10018192	F002774	MQTRSLILLLGAVAVVASGACARDDDRSTTRVQVIDSAYAQSWEPMEDTGTVYRIAVVSRLGADTVRNVVPPAPIIVGDSLVIGLLQLSEDSSTPQRQIFTLRLGQHRVETTPLPEDVWPSYQDVLVSPDGRYLAYVGEDTMPANPGTYGIVRDLRTGAIVVKGPGGGGCDCDDDYNHARWFPPDSFEIAVAHRNSNGGWQRLSGKASASRVHVDTLSDEPDWH*
JGI12361J15250_1002003	JGI12361J15250_10020032	F062657	MFNTITRTQLVGYWFAAVAVVVAAAVVMGVNPAVSTTAVLLALSAVPPGIVVALWRGGPPQTVAEILYVTNKGTEGRS*
JGI12361J15250_1002450	JGI12361J15250_10024502	F082289	MSCKVTAIAAAILFDLNTHATAIESSVFMLQSGVKPKKIPMADPSAIECGVS
JGI12361J15250_1003063	JGI12361J15250_10030632	F055994	MIRHQVYFDRLGSLQEDSPSWRSVFAGLSVLRLVDSYVDTGASVDPTNWAQLHNVRSAVDNVSNGDPVRGVLTTVLEEATKRATI
JGI12361J15250_1003221	JGI12361J15250_10032211	F035436	LSGACRNAGNDPVPPSLPGSYVYAGKGSTFTKPWEFSARLDLAPDRHYTLTLDKAIDGHRDSTETDVGTYTVSGDHIQLRENGHGPRNSQDMHKLQIKADSLIAEVGWTAEVFIKGVGAPNVVFVKRRG*
JGI12361J15250_1003327	JGI12361J15250_10033272	F016259	VSPFTIAKLALMLVAAILLGWGIKTDDSALRWAGILFLFAALILRFFKPRKPRGLP*
JGI12361J15250_1003448	JGI12361J15250_10034482	F080312	MTATPLPFESRSATGFLKPMFSALQRRALRTSIIFGSVF
JGI12361J15250_1003552	JGI12361J15250_10035521	F008790	MITPILRSKDAIATWLIDVAGNVAISISDVALLRRIQSLIIPAFVSTEQAMVWGSDLNPEQHATLLDVQRRVSNAARVEADPQRMVNLATQ
JGI12361J15250_1003574	JGI12361J15250_10035741	F019413	SEVTVERTENTKQWLSSLAVPSGIRSTALTIFAGLSGHDRARCALALEDLVKAAFAQLDEASRLELNALIHELASTPLVAPGAAPH*
JGI12361J15250_1003896	JGI12361J15250_10038961	F056939	TTAKLGSSVVCALLLILLTTGGAAAQNVLAKIPIPATSATGQVAVSKVLNRVYVSADFSSGGTLTVIDGKTLTVLTTINNSNGVNVDINNDNFWTGNVTGGQVLAYSGSTNSQISANTVGFCPGETGFDCKKRRFWVGAQCGAGNDPLFVFDANTFALIAGPIATGGTMGPIVVNPLNGKLYFQSSGVCKKADPNTFSVTSTALGTVLAADQHKSKLFATSGNNLQIINGATDNVEYTVPLAYTPGGQIAVNNALRHIYLLN
JGI12361J15250_1003955	JGI12361J15250_10039552	F067158	RRSDADATVPNPVADILALKDTLHLSAVQIVGLTDVADSLQAKNGRIYQSIRALLARSREAGDVGQMTGSVALMLEEASRNTATAVSAAQKFLRPEQWEILPLSMREQIQSSTPDGSAQQ
JGI12361J15250_1004010	JGI12361J15250_10040101	F038475	MRKNYLLLAGAGAVLLAACSGEKKTSMDDDLKKSLELASSSDGITLANSSPAAGQQIVSAIERTSPPAKQQAPSNKVRHHKAAPKSPPEVVETQTLATVNEPEVQTVAQAPVADDPTPVSPRPRPTSV
JGI12361J15250_1004131	JGI12361J15250_10041311	F003843	GSSSRISTPSEPDSPIGEAKPQTELPRRTSKSIRGSRQVKLSSAARMLATFSIAASLPTSLFAQDSSDIHVSVHVPDSVAHVVDRESADHARFAIVSRDGQAALLLMDTTIVAQMTDRGLARMNSREATDTIKSAATRLFARMALGALVPFFDHGIAYHLRDLADAKYQNGRLLLIRGNGDEVFRDVEIGKGPLMESFRPADAEAFAAHARAARARLRG*
JGI12361J15250_1004509	JGI12361J15250_10045091	F001974	ETDAFTAPAGTNDMDIHVDVGPSGIESLKHASWDRLACLLRHWTWANEAMATFDRELATGLDDEDDPMSDHPFGAFYHWCALLCGLGEAALEHGLLSPLQLEPIRQDLEAGMPVLKACRQLLIVVPASLEEHPLIVTLVRDGDTLPRLRRLHHAFGEALREEQASREIDSLDK*
JGI12361J15250_1004627	JGI12361J15250_10046271	F083420	DAPNAVPVEKLAPKSSPAANDAQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
JGI12361J15250_1004845	JGI12361J15250_10048451	F052763	MVPPIAGLNASSEVSDRYDWLTPERLAHMRAVLLGLTLFFGLVVWIFHTLGPATARAPNFIVKLRGVGVLTWLYALVQMVDMRFYNSRFAQRRRAQLRIPESLSGWLLGQMLAWFGILYYGLTEDLRWYVAGLVIFALSFWAFPVREEKASSHSM*
JGI12361J15250_1005132	JGI12361J15250_10051322	F103636	MPWQSAEPGDINNFVNGNEVVGVEVYAGPGAPAQYTRAMGDCTTIVLWTKFKIRDLSTGSR*
JGI12361J15250_1005275	JGI12361J15250_10052752	F021355	GFGFTIALANLRQRLTKGEQVELKAVGFTPVPTLKPQLVTVQVSYGGIDRMKMAGRFYTGYRFIVHPEIPAIAKLFIQVPDTKIWLTSPAPAGFLRWEGPIILPTDPIRRVDLISDSASGAAEPVEKK*
JGI12361J15250_1005352	JGI12361J15250_10053521	F019412	MQILIQVLCTKGRSIRQAIADDPRIDRYGLQVTKEAQPGRAPGWLKLHAEEMRGALNVEWDAQSSVLSARVVTRGSRKPSPIVGAFVNYLLQRHDGRVQSITT
JGI12361J15250_1005611	JGI12361J15250_10056111	F070275	MRTWNALVVILVVAAAPARAQRAVDVPPGHTCTAITQANADASAGTVNIQHDGTPIPGIPAPDISRGFSGIPRSAQPPLTTSQQRILECTHHVAEANAESAYTLFVPS
JGI12361J15250_1005901	JGI12361J15250_10059012	F026671	REAGSERSMDQMCESMDKNRIQGVSVGRAGNLSQSPYPSRMRSVDSATVHRRQLNLPQEICSVSLQRLRWPKGDLTAEQKSAEGILGYAVGELVRHSNTERWSQQIGKPVTVTEGPNEKSGQ*
JGI12361J15250_1006386	JGI12361J15250_10063861	F076435	MAYTQEGIMAQIWIAFGQGAGAIRVSHDAALELYQWYYDKITPYIIHERWQTDAVQALDRIRAIGRHAAFLAARDGSTVIKPEYVYEAASKVQAQSLTPLC
JGI12361J15250_1006462	JGI12361J15250_10064623	F004019	MSIGKAAVIAAVSGVVVIVSLYAVVKGSMSAGMTRLLAILSLLSLVALAYGLIELALAVIATTAERRRQAREVS
JGI12361J15250_1007145	JGI12361J15250_10071452	F001752	MIRFASRIAIIATLAVGTPLVAGGQSAPWRQVYKDADVTVIFDTANLALQSPGTWTTVTSWDYARPRVTEFKKPYTRLVERAYVRCSPVRIKRVRSTLYATNNVLVRDEGEVDSRDVAHMVWDRPKPGTAGRNAFETVCGVIARKSGGKAAPAAAATTK
JGI12361J15250_1007908	JGI12361J15250_10079082	F049605	GRQSLYAFPIFWAIADGPRWLRYPPFAVLGFASNLALVLLLTHFAP*
JGI12361J15250_1007939	JGI12361J15250_10079391	F020261	MATFIVSPFGLFVRGLVAGLFRIPSEQTFAVLAYGWAVASGERQTITTYLWLTGATSVKHFSCFYRFLGGALYQSRWQLWARIIRGAARWVPEGAPIVLHVDDSTKKKAGRQIEGVGHYRNGAGSARQEYRTLRGLNFVWGQMRVPVSGWPGQSVSVPIGLSLYLKEEQADKLHLPYQTR
JGI12361J15250_1008207	JGI12361J15250_10082071	F105382	MMNKPVLVAAIVACLGVSAIAAAQAVFTKVQVADRIRKVEDGVDEFRKWADNRAEHGQSTAQDAKAS
JGI12361J15250_1008295	JGI12361J15250_10082951	F047855	LGALDGELMRHGGFALQAELVNTPLSSLAPSSTLDSVQLYAEKAELFATRDNYARARAFADSAWRLEKRTSDDPNLSAYVRRGQYEVLAWLAAMAGDRNVALKMLKKAGESPTISRYPKGQEAIQLACTTAAVFGFLGDAEAMVPFTRKCFTSANGYPVAYFQDPEFAWRKEDPRFADXLRP*
JGI12361J15250_1009822	JGI12361J15250_10098221	F081317	LGTILRITIAPAGRGARTTTALHMRRLGLLALLVALLPLGAAAQTPDDTTHFVHISPAIGVHYGAPLRFSIAAGGLFDFSDNRNDGIIAMGEMGQSGGQLSIGYFRMLRFGQGFDLRVAVLRTADDPWKAAESTTYVGAEAHLMFLVGVGGRVGWFRRVTAVNDGKPYDNVGMFGVSIG
JGI12361J15250_1011069	JGI12361J15250_10110691	F063192	MLNNNERRGFAIPIAILVIAVLTIMIAGGFSLVSAERRSVADQRSQISAFRIAEQGLELFLVRRDSLMQGKPSY
JGI12361J15250_1011528	JGI12361J15250_10115281	F004492	TKSGVRDPSYAHGIVVKMGAQDAFSFFDHFEELLFDRIGVPPRSLAANADQIRQSTHDRIEDTIFEMNKFVVDKNPMVGLAWKDISDAVQAKFKDVLEPTRTKQIEDLTRETYYVYIFLSLYARLDGLRSRGILSPNDDMIVTWKRSWLPNLMRSELGHWMLDNNLMEY
JGI12361J15250_1011557	JGI12361J15250_10115571	F015476	MDVLRNLFGNLSAGIIRLLVTVGILAAVYFFIVKPTLDTTEKVSHEVNVNVQKSFEQGGLSEISETIDDVNGQVRREVKRSLRASQRQGDADKLIRCIQRAHQNVDR
JGI12361J15250_1011814	JGI12361J15250_10118141	F037668	HRIIVKMGEQEDFSFFDRFEQLLFDRIGVPPRSLSANVEQIRQSTFDRINSTIFEMNRFVVDRNPMVGLCWRNISDAVKAKVQNFPEPQRQKQTEDLIKQIYYVYIVLDQYAQLDDLRTRGYMSADDAKITEWKRSNLPNLMGSEVGKWMLENDLMEYYSEQMIKDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001475: Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN102

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences