NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300001278

3300001278: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY75



Overview

Basic Information
IMG/M Taxon OID3300001278 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0085351 | Gp0055730 | Ga0012513
Sample NameMacroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY75
Sequencing StatusPermanent Draft
Sequencing CenterJ. Craig Venter Institute (JCVI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size1573782393
Sequencing Scaffolds22
Novel Protein Genes24
Associated Families20

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium2
All Organisms → cellular organisms → Bacteria2
All Organisms → Viruses → Predicted Viral3
Not Available9
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Gramella → unclassified Gramella → Gramella sp.1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-61
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMacroalgal Surface Microbial Communities
TypeHost-Associated
TaxonomyHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Surface (saline)

Location Information
LocationBotany Bay, Sydney, NSW, Australia
CoordinatesLat. (o)-33.966629Long. (o)151.166614Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F000256Metagenome / Metatranscriptome1448Y
F001217Metagenome / Metatranscriptome745Y
F004866Metagenome420Y
F010834Metagenome / Metatranscriptome298Y
F013088Metagenome / Metatranscriptome274Y
F017135Metagenome242N
F017557Metagenome / Metatranscriptome240Y
F025150Metagenome / Metatranscriptome203Y
F025969Metagenome / Metatranscriptome199N
F028441Metagenome / Metatranscriptome191Y
F033796Metagenome / Metatranscriptome176N
F038193Metagenome166Y
F049001Metagenome / Metatranscriptome147N
F053218Metagenome / Metatranscriptome141Y
F053312Metagenome / Metatranscriptome141N
F059990Metagenome / Metatranscriptome133Y
F065671Metagenome / Metatranscriptome127N
F091844Metagenome / Metatranscriptome107N
F092050Metagenome / Metatranscriptome107Y
F103255Metagenome / Metatranscriptome101N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
BBAY75_10039028All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium2179Open in IMG/M
BBAY75_10042383All Organisms → cellular organisms → Bacteria2074Open in IMG/M
BBAY75_10049290All Organisms → Viruses → Predicted Viral1892Open in IMG/M
BBAY75_10055107All Organisms → Viruses → Predicted Viral1771Open in IMG/M
BBAY75_10075172All Organisms → Viruses → Predicted Viral1465Open in IMG/M
BBAY75_10076010Not Available1455Open in IMG/M
BBAY75_10083643Not Available1372Open in IMG/M
BBAY75_10128931All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium1051Open in IMG/M
BBAY75_10155364Not Available937Open in IMG/M
BBAY75_10171452Not Available881Open in IMG/M
BBAY75_10175027All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.870Open in IMG/M
BBAY75_10177718All Organisms → cellular organisms → Bacteria862Open in IMG/M
BBAY75_10181941Not Available849Open in IMG/M
BBAY75_10234202Not Available728Open in IMG/M
BBAY75_10237784All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.721Open in IMG/M
BBAY75_10240644All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium716Open in IMG/M
BBAY75_10263767All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Gramella → unclassified Gramella → Gramella sp.677Open in IMG/M
BBAY75_10277705All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6657Open in IMG/M
BBAY75_10301791All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon625Open in IMG/M
BBAY75_10398956Not Available533Open in IMG/M
BBAY75_15160832Not Available518Open in IMG/M
BBAY75_15163467Not Available554Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
BBAY75_10039028BBAY75_100390283F028441MTLKQLIKLEDKAKEVWVVSPTLHYDVDNKAFSEIVSVNLGQKTKYRYIVPHTATVIKNITTYKAKYGVSEAEIRENFLILPASEFNPFITECAIYDAKDRKKCVAVAAPATDNSNEAIKFNDKTSKAMARSYKALWKKYKRTNL*
BBAY75_10042383BBAY75_100423833F028441MTIKQLIKLEDKAKEVWVISPTLHYDTENKDFTELVSVNLGEKTKYRYIVPASRTVAKNLKVFKKTYKVTDAEMQKIFCILPESEFNPFIQEIAIYNASNECVACAGSSTEDTNDVIKFDQAHAKDMAKAFKSIWRKYKLTNP*
BBAY75_10049290BBAY75_100492904F017135MIPIISCPLPGGGQALIKTQDIGGATTGKNPKECDVYILGWAANGITVDLSLDDFAEVWVSALIDDGEPEYEVVFTPDEVH*
BBAY75_10055107BBAY75_100551072F103255MKLTADILQELSIYINLNYEDDWYLQEKVNELKTKIYEQ*
BBAY75_10059155BBAY75_100591552F091844SVARFGRVGGRARVGAIEGTAGALLTEPLYYGLSRDQQLDYTMGEALLNVGAGLFLGGAIGTVGGMLTRADVDAEAVVRASEPEAPVRTDVVPIELPPRMTEAEAMAKADRVVKQTREMYGITGGRVTYETAVRQFVTDQGINVAMVLPKAVARPQTLSEYIRARGGINDQDPTFRGELKNLGIEGRAGYVNSKGNMVNGISNTKTDTNLDDAAEMAFEAGFLPERSTNALIDALSEESRGNFTFARQDMEKADAWRTYSASKDDFEAELSRRADIRAELEEQGVRDITDEEIALVSEEMSRNNIDATSAFESVTGRVQDMQSEMAARHGLDIQNDPLADFDAAARFDRIGDDIELDEPIAQEEAIIAQMREDGELTPDQIKQLDEIEQIDAQAQAYVEVTEAVTVCVARS*
BBAY75_10075172BBAY75_100751721F001217SKTKFNGFEKYFIQTALRHAIEEVTDVLATESAGKRSLYAPGYFTSVGNEIIDKVNSMTLKKYQD*
BBAY75_10076010BBAY75_100760102F004866MAIVNKVDLKMQVDIDVSIKYQILTYCFFNDILISNSDLKFLAELSKNSGIELTKFCVAVVEKGIFKSPQSARNAITKAEKKKLLSKIGNNKKTISLNNDLNVQINGLVLLDYKILGSESKES*
BBAY75_10083643BBAY75_100836432F053312MSYKVLNDAVGLIRDETPMWEGSYQELPDKTKDGLICLWLITHPTWMDDIFPHTVSDKPLLALEAIYSEDATSRMAAAMFRDAADRNAKDVDNDAYLSEALDDFEDILDTPDFLEEIRHQIYLYLEPSMEELVMDSFLHLNHLDRLVMGSH*
BBAY75_10128931BBAY75_101289312F065671MTEPAFMAFAIFSSLSVCEEFVEYYDLERIFEPQCVQMGGAPEYQLPIPNIRPMPRPEVADD*
BBAY75_10155364BBAY75_101553641F049001KSILILIAFVLSLNMFSQEPTLLYMNSDWNHKNDYIFLKSIKGVKILEVDYDSQPDKFKEAIKSVPAIILFDKNKKLKKIWQAGLTMKLTVDPKDIQKAINELNK*
BBAY75_10171452BBAY75_101714521F000256ADGVSGIGSAPFNVGSEIHQQSQTRERIEAHLTEQRVAKEHRANHTHLEALREQKLDLGKGYDRFGAKTTADRPQGTNINIEV*
BBAY75_10172673BBAY75_101726732F038193VQASFSSPPNLSSAAYAAIXLWVKSASGALLTMQVKATIEPRSDRSRPVCYAFTRANGDAQIFAYVALDIRLFILRDAPSGKTVRIKPADFTRQAMDDSIESMLG*
BBAY75_10175027BBAY75_101750271F053218YVYTGTQTTDRTNLFTLTSFAISNVVTFEISEIVRDYILNTFDGDYATDNVWVDYRTTSYIQGSAQTPSAYTQLTGFDSYGFYEDGANPQNDSGLLQSNTKVVKLDDAPATIPVYTEITNRVSYELDGELVYTKAITDSNESDEQIEYVTNTINGSDEFEDRVIQDGGTFEGSSCLDQFANEFTLFDFDTIYIDTDDEVIKLTVDNIEECKYDPYKITFVNKFGALQDLWFFKRTIRYKQTPTKDTN*
BBAY75_10177718BBAY75_101777183F013088MDEKNKKALWIPEELHKDIKIFAIQNNLTIEQATQMLIKLGMVSYESEKGNDSV*
BBAY75_10181941BBAY75_101819413F010834MNELTLSLTLPKTISLNALYAGKHWTFRKKTKDEYKKIVEAELARYDHHFAESMSIHIRYNTRADVDNLVLVSKFTADTLVANEWIADDSPKYYHKLTITYDQSVEKNYCEVEVRLKL*KRLTN*
BBAY75_10234202BBAY75_102342022F000256MADGVSGIGSAPFNVGSDIHAQTRVRERIETHLVEQRVAKEHRANHSHLEALAKQRFDLQETYDRFGTKTNADRPQGTNINIEV*
BBAY75_10237784BBAY75_102377841F092050MQLSEDCWIEINSQTLPINVSSSSLNYKTHLNDKLINYTIEIDFAF
BBAY75_10240644BBAY75_102406442F028441AKEVWVVSPTLHYDTENKDFSELVSVNLGEKTKYRYIVPATSTVAKNMKAYKKMYNASEEEMNNNFLLLPASEFNPFLEETAIYDASTNCVACCAPPTEEGNDVIKFCEATSKNMAKAYKALWKKYKRTNP*
BBAY75_10263767BBAY75_102637673F017557MKGQTHGGKGSAQRKTDSKKFAANWDAIYNKNTTKSSKKKK*
BBAY75_10277705BBAY75_102777051F033796NKTYKVAGVHCGKKGVTVLDGKHRELEEAEQSAKYLSGKYALENSLGITNFVAFNTHALTMLPPYSIDMEAEWNYVVEQEGEDTPSVEINRQIGGSI*
BBAY75_10301791BBAY75_103017912F025150QTEGRDISKYSSFIDECIMSLFPEDATYDIYFEVKKFVDKDGSHAGFCMGDDIESVISLATHWVYEDGEEIAYEPHELAANIAHELVHAKQFYRGQINMVDNVWKHNNVNIDCDTIDYEDLPWEVEAYAYEVILTDLLWENV*
BBAY75_10398956BBAY75_103989561F059990LADKKITQLTNITGADLANGDEFVVVDITADETKAITFDELKTAFDTGTGFVRVTGDTMTGALNVESTITSGGMIVDGDVTFGDNGKA
BBAY75_15160832BBAY75_151608321F025969MWTALLLLCSVEGKCFAFGGPVMQSESQCIQSIPIGLKYAQQMFPAYRA
BBAY75_15163467BBAY75_151634671F025969MWTALLLLCSVEGKCFAFGGPVMQSESQCIQSIPIGLKYAQQMFPAYRAMDYQCVQWGEGA*
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