Sample 3300001124

3300001124: Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3

Overview

Basic Information
IMG/M Taxon OID	3300001124 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0071004 \| Gp0054848 \| Ga0003019
Sample Name	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	35909008
Sequencing Scaffolds	67
Novel Protein Genes	70
Associated Families	66

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	1
All Organisms → cellular organisms → Bacteria	15
All Organisms → cellular organisms → Bacteria → Acidobacteria	4
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3
Not Available	22
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	6
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1
All Organisms → cellular organisms → Bacteria → Chrysiogenetes → Chrysiogenetes → Chrysiogenales → Chrysiogenaceae → Desulfurispirillum → Desulfurispirillum indicum	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Forest Soil Microbial Communities From Multiple Locations In Canada And Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil → Forest Soil Microbial Communities From Multiple Locations In Canada And Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	coniferous forest biome → land → spruce forest soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Thunder Bay, Ontario, Canada
Coordinates	Lat. (^o)	49.08	Long. (^o)	-89.38	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000362	Metagenome / Metatranscriptome	1231	Y
F000386	Metagenome / Metatranscriptome	1203	Y
F001077	Metagenome / Metatranscriptome	785	Y
F002437	Metagenome / Metatranscriptome	559	Y
F002473	Metagenome / Metatranscriptome	556	Y
F002530	Metagenome / Metatranscriptome	551	Y
F002787	Metagenome / Metatranscriptome	530	Y
F004287	Metagenome / Metatranscriptome	445	Y
F004584	Metagenome / Metatranscriptome	432	Y
F004702	Metagenome / Metatranscriptome	427	Y
F006512	Metagenome / Metatranscriptome	371	Y
F006944	Metagenome / Metatranscriptome	361	Y
F007711	Metagenome / Metatranscriptome	346	Y
F008642	Metagenome / Metatranscriptome	330	Y
F009407	Metagenome / Metatranscriptome	318	Y
F010482	Metagenome / Metatranscriptome	303	Y
F010484	Metagenome / Metatranscriptome	303	Y
F010670	Metagenome / Metatranscriptome	300	Y
F012243	Metagenome / Metatranscriptome	282	Y
F012993	Metagenome / Metatranscriptome	275	Y
F014753	Metagenome / Metatranscriptome	260	Y
F015333	Metagenome / Metatranscriptome	255	Y
F015679	Metagenome / Metatranscriptome	253	Y
F018226	Metagenome / Metatranscriptome	236	Y
F018767	Metagenome / Metatranscriptome	233	Y
F020612	Metagenome / Metatranscriptome	223	Y
F021142	Metagenome / Metatranscriptome	220	Y
F023536	Metagenome / Metatranscriptome	209	Y
F027277	Metagenome / Metatranscriptome	195	Y
F027960	Metagenome / Metatranscriptome	193	Y
F028643	Metagenome / Metatranscriptome	191	Y
F030822	Metagenome / Metatranscriptome	184	Y
F032734	Metagenome / Metatranscriptome	179	Y
F033135	Metagenome / Metatranscriptome	178	Y
F033554	Metagenome / Metatranscriptome	177	Y
F038768	Metagenome / Metatranscriptome	165	N
F040801	Metagenome / Metatranscriptome	161	Y
F042766	Metagenome / Metatranscriptome	157	Y
F044949	Metagenome	153	Y
F045868	Metagenome / Metatranscriptome	152	Y
F049151	Metagenome / Metatranscriptome	147	N
F050145	Metagenome / Metatranscriptome	145	Y
F052078	Metagenome / Metatranscriptome	143	N
F052736	Metagenome / Metatranscriptome	142	Y
F052896	Metagenome / Metatranscriptome	142	Y
F055901	Metagenome / Metatranscriptome	138	N
F056286	Metagenome / Metatranscriptome	137	Y
F058359	Metagenome / Metatranscriptome	135	Y
F059154	Metagenome / Metatranscriptome	134	Y
F061340	Metagenome / Metatranscriptome	132	Y
F063635	Metagenome / Metatranscriptome	129	Y
F064049	Metagenome / Metatranscriptome	129	Y
F066221	Metagenome / Metatranscriptome	127	Y
F070424	Metagenome / Metatranscriptome	123	Y
F071421	Metagenome / Metatranscriptome	122	N
F073170	Metagenome / Metatranscriptome	120	Y
F075294	Metagenome / Metatranscriptome	119	Y
F076316	Metagenome / Metatranscriptome	118	Y
F082956	Metagenome / Metatranscriptome	113	Y
F084816	Metagenome / Metatranscriptome	112	Y
F085409	Metagenome / Metatranscriptome	111	N
F085929	Metagenome / Metatranscriptome	111	Y
F092402	Metagenome / Metatranscriptome	107	Y
F095810	Metagenome / Metatranscriptome	105	N
F099575	Metagenome / Metatranscriptome	103	Y
F105587	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGI12692J13336_1000008	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17919	Open in IMG/M
JGI12692J13336_1000011	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	15764	Open in IMG/M
JGI12692J13336_1000017	All Organisms → cellular organisms → Bacteria	12646	Open in IMG/M
JGI12692J13336_1000028	All Organisms → cellular organisms → Bacteria	10993	Open in IMG/M
JGI12692J13336_1000216	All Organisms → cellular organisms → Bacteria	5325	Open in IMG/M
JGI12692J13336_1000252	All Organisms → cellular organisms → Bacteria → Acidobacteria	4906	Open in IMG/M
JGI12692J13336_1000294	All Organisms → cellular organisms → Bacteria	4505	Open in IMG/M
JGI12692J13336_1000333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4224	Open in IMG/M
JGI12692J13336_1000474	All Organisms → cellular organisms → Bacteria	3453	Open in IMG/M
JGI12692J13336_1000479	All Organisms → cellular organisms → Bacteria	3437	Open in IMG/M
JGI12692J13336_1000533	All Organisms → cellular organisms → Bacteria	3230	Open in IMG/M
JGI12692J13336_1000645	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	2885	Open in IMG/M
JGI12692J13336_1000713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2686	Open in IMG/M
JGI12692J13336_1000715	All Organisms → cellular organisms → Bacteria	2671	Open in IMG/M
JGI12692J13336_1000934	Not Available	2144	Open in IMG/M
JGI12692J13336_1001053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1961	Open in IMG/M
JGI12692J13336_1001152	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
JGI12692J13336_1001180	Not Available	1768	Open in IMG/M
JGI12692J13336_1001621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1362	Open in IMG/M
JGI12692J13336_1001774	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	1277	Open in IMG/M
JGI12692J13336_1001889	All Organisms → cellular organisms → Bacteria → Acidobacteria	1221	Open in IMG/M
JGI12692J13336_1001915	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
JGI12692J13336_1001999	Not Available	1175	Open in IMG/M
JGI12692J13336_1002087	All Organisms → cellular organisms → Bacteria → Proteobacteria	1139	Open in IMG/M
JGI12692J13336_1002136	Not Available	1123	Open in IMG/M
JGI12692J13336_1002262	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
JGI12692J13336_1002676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	978	Open in IMG/M
JGI12692J13336_1003006	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
JGI12692J13336_1003058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	904	Open in IMG/M
JGI12692J13336_1003182	Not Available	882	Open in IMG/M
JGI12692J13336_1003234	All Organisms → cellular organisms → Bacteria → Chrysiogenetes → Chrysiogenetes → Chrysiogenales → Chrysiogenaceae → Desulfurispirillum → Desulfurispirillum indicum	875	Open in IMG/M
JGI12692J13336_1003397	All Organisms → cellular organisms → Bacteria → Proteobacteria	852	Open in IMG/M
JGI12692J13336_1003616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	823	Open in IMG/M
JGI12692J13336_1003678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	815	Open in IMG/M
JGI12692J13336_1003822	Not Available	799	Open in IMG/M
JGI12692J13336_1004222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	759	Open in IMG/M
JGI12692J13336_1004348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	749	Open in IMG/M
JGI12692J13336_1004618	Not Available	728	Open in IMG/M
JGI12692J13336_1004639	Not Available	727	Open in IMG/M
JGI12692J13336_1004864	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
JGI12692J13336_1005114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	695	Open in IMG/M
JGI12692J13336_1005212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	689	Open in IMG/M
JGI12692J13336_1005342	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
JGI12692J13336_1005400	Not Available	678	Open in IMG/M
JGI12692J13336_1005501	Not Available	673	Open in IMG/M
JGI12692J13336_1005520	Not Available	672	Open in IMG/M
JGI12692J13336_1005787	Not Available	657	Open in IMG/M
JGI12692J13336_1005881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	652	Open in IMG/M
JGI12692J13336_1006066	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
JGI12692J13336_1006135	Not Available	640	Open in IMG/M
JGI12692J13336_1006145	Not Available	639	Open in IMG/M
JGI12692J13336_1006358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	631	Open in IMG/M
JGI12692J13336_1006448	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
JGI12692J13336_1006833	Not Available	611	Open in IMG/M
JGI12692J13336_1007267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
JGI12692J13336_1007473	Not Available	588	Open in IMG/M
JGI12692J13336_1007800	Not Available	578	Open in IMG/M
JGI12692J13336_1007962	Not Available	573	Open in IMG/M
JGI12692J13336_1008301	Not Available	563	Open in IMG/M
JGI12692J13336_1008388	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
JGI12692J13336_1008502	Not Available	558	Open in IMG/M
JGI12692J13336_1008572	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
JGI12692J13336_1008599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
JGI12692J13336_1009018	Not Available	545	Open in IMG/M
JGI12692J13336_1009122	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
JGI12692J13336_1009486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	534	Open in IMG/M
JGI12692J13336_1009559	Not Available	532	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI12692J13336_1000008	JGI12692J13336_10000085	F001077	VWKILPGLRGLSCSDFRATPTDDPNNDKGVAFECATQTKCDAFMRELETHFGPQRFSNNATAFETVKAYVAGRTL*
JGI12692J13336_1000011	JGI12692J13336_100001115	F061340	MNLTRNQITFLRDIPADINVDKTSGRHYYFDGSLSELSSFIKLINDDKIYLLIPFFSNSKSLSNARLRISEPFLVNNKSNSALIIKFILDQNSSGFELKQDTQIQFSFEFKRV*LSYK
JGI12692J13336_1000017	JGI12692J13336_100001710	F004702	MKSSILHKSFLAFLLATAAFVAACGSGAEGKYRDPSGSINAEFKDGKAYIGLGSYAVDGTYKIEGDKIIAKGDFGLMLPSPLVFTINKDGSIDGPRSTMIPRLEKVK*
JGI12692J13336_1000028	JGI12692J13336_100002811	F021142	MILLGVFFLPLSPGQTPVAQAGSDKMILTAVDFEAGVSYRSVQSHAPIGLITNPCSYADNFVPTIDWNDGTGEHRPDTNAETKPFYTKVPVVQNGVYLFWDDTHVAVAPGAQTVITKLTVHCLGDPPGDQVFVTRNSVNIFARIPVNQAEFMKDGNRVDSVKGHDTVDLTLTLDAPAPRSGTWVKLEAEPAALLNSLPPYFQVPARETQAKISGMELQHTTSNAGLVVTASTVGRPQKTQLLTVLP*
JGI12692J13336_1000216	JGI12692J13336_10002166	F002473	MSINDLPAIMGTVLIVVGLALVVVSTWSRAERSEKTTQAGALIVVVGAFLLGLSIFVSHGK*
JGI12692J13336_1000252	JGI12692J13336_10002525	F004287	MENGDGSDASEQDWYISRTHGVYHIPGCAKGEPFALLIIKARGDALDLGENRRFPFTITARQIAEDLLQDLHDHGIFICEGARPSSGELATARREGFYQKLITEGDTMWARGHSFREISDLHRRAAMGLGVEREWAYVPMRMGDCPACGEKVKIGVAVCRHCSAILDEEKAAKHGLGAGAAAARLNVNGAQSAEKKSRA*
JGI12692J13336_1000294	JGI12692J13336_10002942	F002787	VDESKRMAVDFLEKEIKTYIALALFFSKEGFKENILVGNTRTTINANYYKDRMREARKLVTELRKPI*
JGI12692J13336_1000333	JGI12692J13336_10003332	F006512	VRSLCKSLFIAILVASLLNIPAFAAPALAANDKPLGLVTQAQEAVIGTALVAVGTTVYPGDTVETEEGGTLRMKVGGSQVYLLASSAATLSQKSDMVHALVSRGTVGFSSNGTDQVGLEIPEGVVSAANGQPAYGQVTITGPLEVVISAYRGTLVLNNDGELHMIPAGKSYRVTMDLEPAATKPVAQEAAGVGGKDNDIRSPRHRHLVFDLIVLGVAGVGSYFIFREVSESPSTPK*
JGI12692J13336_1000339	JGI12692J13336_10003396	F095810	NEPAQPPAATAAPVWNASAVQSSFAGVQVKEVDATHAALIFSYDLDNNTDVDYRLAKGPATVVMTRLKSSGSVSSEEPVELDSSVFLPARNRTRIAVEVTRNFNWPTGLPGTQIGPVNQEKFRGLVAQEVANLSGFVVFDQATHFQIELPGGWPELSAGNTVPGGF*
JGI12692J13336_1000474	JGI12692J13336_10004745	F064049	VRSESHTGPDDQVLDHIVLRLNELNNTASQILIFLSFAIVAAVTFLTPALDFSRRTAVHRALQWWIGAIFPTVIGILPMKEIKERNLRWYRALLWARFVLMWAAIACIFLGAIQFFRAV*
JGI12692J13336_1000479	JGI12692J13336_10004794	F018767	MQKAHLYEAILSLNRGVDEAVRGLERLKRAKASQFDSACFDEELVLFEDHRARLNSYFCSALQRTEQNDSVRFEAQHREYEKNTLDEVQVYRDVRLVEDRRRAEGKPPKVRFFTPEEQRDWERQYPTTPGDVPRAEGEANQ*
JGI12692J13336_1000533	JGI12692J13336_10005334	F002437	MKLRAIGIQRFLQVSSGLIILGLLVEIVSLVWFHPLAFVLFAFVGAMLIGLGIVVYLASLVLAVSAPAENRG*
JGI12692J13336_1000645	JGI12692J13336_10006452	F085409	MRYDVNNFDRPMDQCRDFPVFDTIKQKLEFANQCRESYIKLQLEYGKLNIRHSGFQDSGHVSRADQAVKEMESLIGLINIEYQYQDYIVEVARAFTS
JGI12692J13336_1000713	JGI12692J13336_10007132	F018226	MSKFGKYFLLVTGLALLVTFARIPGPIINVHADNRGCSVASLKGTYAILRTGVNNVVGGPIASIGIQPFNGDGTIGLTRLTRSNNGDIQDWTYAPPSVDASYTVDADCTGSLFTADGTKTNNLVVFDGGKRFFLLSVAPGTIVTQEGTRIEEEKKD*
JGI12692J13336_1000715	JGI12692J13336_10007154	F032734	MVEDHLSGMKARNGTCVFVCSTCRVPPNFTFGAKPGGELSYLMLCPKCGCVLGEWDSIEARGRELSEFAKALKRPHVGAL*
JGI12692J13336_1000934	JGI12692J13336_10009341	F071421	SPGHSWRSRVGYKEGAPLKGTQPGTAPGTQGSTEAAQQAIQLPPLSFPRDGPPQFHSGLTATMVCDMRLSGGGNLSPITPKGGYRFGPTPMNLARVVAIGQPPTDPIAACWKTSRTSANFQS*
JGI12692J13336_1001053	JGI12692J13336_10010532	F052736	MTVPESESKMSSSPITARLEAATGELHQLEELVKSGNLDARVLSEFRNAVDHIRNTTWAVQKWIGLSGESGGDPFSVLPIMSAERVKRATQICTDLALDLQTVDIGIDTPGISSLYNAVEDLHRRLGALLKRDSR*
JGI12692J13336_1001152	JGI12692J13336_10011522	F049151	MYSVKLEYQDRKNGLEGRTLQIDTGSMAAAIGKATREFLKSLDRKQRFDANKNGLTIVASKIADDEAPAETASKASA*
JGI12692J13336_1001180	JGI12692J13336_10011803	F018767	VFVRSGRTPDRLAIRVPQNFHHCPTAASAARDEEIQMQKAHLYEAILLVNRGVDEAVRGLERLKRAKESQFDSSCFDEELVVFEDHRARLNSYFCSALQRAEQHDSVRFEARHREYEKNTLDEVQVYRDVQVVEDRRRVEGKPPKVRFFTPEEQREWERQYPQPLGDVPRAEDEASR*
JGI12692J13336_1001621	JGI12692J13336_10016211	F000362	DPNEMVRYVHNLMTRAPSSSGDMSIAMAQRQWGGDTPQARAAQLRWSALNRAFGDARVSSWTTPQRRDQIHVPAALIAAAGVAKLTIAQDEVVFDIPTLLDATLQLCEPVGHA*
JGI12692J13336_1001774	JGI12692J13336_10017741	F071421	VASRLRGTSPGHSWRSRVGYKEGAPLKGTQPGTAPGTQGSTEAAQQAIQLPPLSFPRDGPPQFHSGLTATMICNMRLSGGGNLSPITPKSGYRFGPTSRNLAKVVAIGQPPTDPIAACWENQQDFS*
JGI12692J13336_1001889	JGI12692J13336_10018892	F006944	MSKKRAATKPAKAHQRDLPRPGKQYPGVHGRIVDWAEHVFEEGMMYVRVRFTDKTELCWTLQTAHVLRESDLSDWKTGDCKQLTVYAENEIDWPE*
JGI12692J13336_1001915	JGI12692J13336_10019153	F073170	MSEEQVVAQKVRRTAVEIEQIVSEFQSSGMSRSQFCRVRGLTFGVLSRYLERMRGAADSGASGDGLVAVEWGGKKPSAERASSCSLSVVLRSGREIRVNTGFDAATLQRLVEVLETM*
JGI12692J13336_1001999	JGI12692J13336_10019992	F061340	MNLTTTNISFLKDVHYSIKVDMTSGRHHYFEGLSEYELSFIRSFKDDKIFLLIPLFDASKSNATLNLSEPFLVNNKSNPVLITKFIMDQNSSGFNINPGTLIKFSFKFKRVFSYK*
JGI12692J13336_1002087	JGI12692J13336_10020872	F023536	MLSQPIRADDFGRVYYDKKNDQLVVTMLYRGTNPNHNFSLKWGQCEAQQSGNLPGVTVEVLDDQYEDSEQQDFKKTTHFGLTNLPCRPVLVTLRSAPRFFYTLTIR*
JGI12692J13336_1002136	JGI12692J13336_10021362	F092402	MSMYITPHDELHVEYQGIALTCPHCQTLTHLTATAVPTFDDLNRRKPKHVGI
JGI12692J13336_1002262	JGI12692J13336_10022622	F076316	MTANGVEAEFLVFGDRESSNCDGRLRFYLSGGRRYGYVPGVADLAMLFVGGVPMPVPGSLHGEQAHGKNQGNCQQS*
JGI12692J13336_1002676	JGI12692J13336_10026762	F033554	MTIRKLGKVLAFSFGGLLLLVLLAMLGVKLALDRAPQYQAEIKQWLYAQTGYHITFAHVSPAFRWYGPELYFEQLELRSKDDQRVLARAAGGRVAADIWQLIRSGKLLAGRIEVESPNIS
JGI12692J13336_1003006	JGI12692J13336_10030061	F012993	MNTSISTKLTALALALVFNGAIMGGMAYLFNAQLQQPTAVASLASTVANTANDVA*
JGI12692J13336_1003058	JGI12692J13336_10030582	F007711	MNTQISTKFAALAAALMMNSLIIGAVAYLFNGPMHQHTTVMSVAQAGVTTLMGRV*
JGI12692J13336_1003182	JGI12692J13336_10031821	F010482	VQKQLIVIRDGKADLAFTGKLLASAAPTSAPKGQWQEYRIFETDGGKHVFSKMTRSVFAEEPDTHEAEVFDPSPSSVPSQLLRSARELARSRPLTWMDAAVAFFGYDPLAKTLYRKLSGQFEEHIS*
JGI12692J13336_1003234	JGI12692J13336_10032341	F002530	ACCQFGLCDTTKMSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLGEGESWSKDGKLQSLDPSEFPEEIRGKLLTAKLELPLRYLQYRRLITYARRSDGMFYAAVTFAGADRAIRLHTRRGRMDLWYREHRDGIVGVTITILISFLTALITVLALNKILRF*
JGI12692J13336_1003397	JGI12692J13336_10033973	F027960	MNVIFVGRKSGRVKEFDLRHPLVVGAALLTVLGIVGTAFSVGVSLGTHRGAVNPINQLGNWSAELLRQQA
JGI12692J13336_1003616	JGI12692J13336_10036162	F085929	RRDPPPPHCSWEEKTLIVRGGDPDDDRPPFEERYSLADDGQRLVEVVSFKGGRSSGFTMSRVWDRVK*
JGI12692J13336_1003678	JGI12692J13336_10036781	F015679	MSGGAATLGDMSKSPNARRIGGPLSWEQLARPDTEQCQRFLAESLSLLLADLLRSVLXDASPALPADEAAVERYRCLADSLADGESRRRTSIGITRAGLAKRCVTWLKLLLTPAPNAPSTAPMREFVDALGLFP
JGI12692J13336_1003822	JGI12692J13336_10038222	F038768	MVGLLLYLALGIGLLVFLWALARRKGAPVEGCGRQFVEARQALRTLQFGLLPENLIQRIFDPEDFRYVTAASSGKIGELFLQERTRISLMWVRRVRSEIRNLMHFHLAYSRLHAKLSLLTEIRLALDFALLLMACRAMRILLYLRGPYGARSMVRVLTATAGRVCAASDKSLAFLNTPALESLRRDSA
JGI12692J13336_1004222	JGI12692J13336_10042222	F015333	MARSLKTKYLLLALVFSAVLSLLLGSLSYYEHRVDAAAVNQLTYATVAQRLETDLETRASSLSEITGTSLGSALSSQNKAAVTSI
JGI12692J13336_1004348	JGI12692J13336_10043481	F045868	VVAFRNTDASGRTTGLLLRCVLYSLLALALIIIDKRYDQLGRIRRVLSIVAYPVQIAVASPFEGWD
JGI12692J13336_1004618	JGI12692J13336_10046182	F075294	MKYFIVALLLVLVVSLSAPLVLAQTTGSVKGVCKDVEGKPITQAEVEWLGTETG
JGI12692J13336_1004639	JGI12692J13336_10046392	F009407	MTDTSYARTNIAALLVILALSAATMVWLFWHFPVITALATVAILLGLGVCARLARLTDSDMTDLQRTEQSV*
JGI12692J13336_1004864	JGI12692J13336_10048643	F070424	MVNKVIDPRGADSSGIYRRPRLVLRLKRFEDLPSLLEKTKSYPTPVRMVGADYSQTRCVGGDGGT
JGI12692J13336_1005114	JGI12692J13336_10051142	F050145	MTEIKNPTRYTGVDRRAPRGDGAAAKPGGRHAAITNSLYNWHSYXNWAEKARGNFDEKK*
JGI12692J13336_1005212	JGI12692J13336_10052122	F030822	MKTAIYGRVVFGASAVLFGVIALLWHDADTWQNLQHIWKLPFGAILGG*
JGI12692J13336_1005342	JGI12692J13336_10053421	F058359	MINAWECFHSATLELVRSTPIKQRLVAAYRRYLAELAEEDL
JGI12692J13336_1005400	JGI12692J13336_10054001	F059154	VTQTTVTQQYSGVYCRACGEPISLPARAEKTIAARQAGASEAVGESQPVVFNLRCKACEKENFYGAKDVVNINGTPRLARPRGRATPQLMRPHLKLARTANA*
JGI12692J13336_1005501	JGI12692J13336_10055011	F012243	LIFLTYIPLLLLTLLLWVLVRRHAYHTYPCFFSYAVFAVLAGVARFVVRDYPHPYYITYYATEAGYDVLGVLVMYEVLRAVLGNLIHGRWGRCIFPAILLASILLSVARSHAAPTQFTRRVAFYILVGEIAVRFAQVFIFAGLVTLVPLLGLRWRQYPFGVATGFGLYATVSLLTTTAFSDFGTRFTFLWGVTSLVAYS
JGI12692J13336_1005520	JGI12692J13336_10055202	F004584	MAKWNLEALNERERACLGHLEQAKRLGVSFSRYCRDKELRLQQWAWVKRVLVRKGVISERRRAERPKAVVGFAPVRVAPAAATMTTAATTGCRIRHPSGWTIECAGYPEVSWLLALLSGEAR*
JGI12692J13336_1005787	JGI12692J13336_10057872	F105587	MSTAGSRSYPDATRLAEIVQKIRVLKLHLSGIIEHSRNSSVVSRLIMASGLLDIAIEE
JGI12692J13336_1005881	JGI12692J13336_10058813	F084816	MQTVSDTAKGASDFANGQVKTFLDNVEDLTRALKDVDSPDIAKVRAKVKIALAAAKSAVADTASQLRDQAQQVGRQTDTF
JGI12692J13336_1006066	JGI12692J13336_10060661	F033135	MLKPVKRDLKKPYSSPKLTTYGTVQQLTQKVGLRKSSDGGRFPRYKTHM*
JGI12692J13336_1006135	JGI12692J13336_10061352	F000386	MTEMAPYLTLNVPPDEMVKYIQDLMTLPHGEIAAGSAMALAQRHWGGDTPMARAALLRWGALNLAFQDKRLETWTVTRERDRIQVPAALVAAAGIAPLVLDNERAVFDIPALLDATLDFQPPAGQA*
JGI12692J13336_1006145	JGI12692J13336_10061451	F008642	MDETQLREKFDTGLKKIRLEIKSRLVLHGLFATITCIDFGPTGDVPDGSRIEIAAKGRSVGRSFDRKQIEGCCLRVGGEVLSSIIAMVDEVSASPAPAG*
JGI12692J13336_1006358	JGI12692J13336_10063582	F014753	MNIQSEIEFFSDLGLVDKARFVARLIFEVAEEAKVGAGDGQDAVRLRFANEMNQRLARFAYQILGEDPARPQD
JGI12692J13336_1006448	JGI12692J13336_10064481	F020612	MGIDDKSSHPELCSGVADGVTRNMVCLFREPDAGNLPVRFDEREQETAPSQT
JGI12692J13336_1006833	JGI12692J13336_10068331	F082956	MKTIHGFAALSLSLILGLVPFALIAVDDFVVAKAEVSTPVAANSVHALG
JGI12692J13336_1007267	JGI12692J13336_10072672	F044949	WSRRKMTSANGAGIVLGYRFRDSFCFHLRLSELLGTEMPRLIERPKTFHGEIESVSERRFAVKIR*
JGI12692J13336_1007473	JGI12692J13336_10074731	F027960	MNVIFVGRKSGRVKQFDLRHPVIMSSAVLLVLAIVGTAFSIGVGLGARHSGGNPIDQLGNWSAELLHQKAQIEDTK
JGI12692J13336_1007800	JGI12692J13336_10078001	F055901	PQCNQRIPARVLWTPAGLSGVVCPHCQAALAPKPISAILVFAVSFGLGDLALMLLRHKGAEFWQACAGFFLVFAVVFALAAPLFLRMRLKDHHDPHLSGHRA*
JGI12692J13336_1007962	JGI12692J13336_10079622	F052078	RRLAVRYESWTATSNDGKIVRFAYKELSDGVAGISAKSDGRFVMIVQRSIRAPLTRKQVEDVFERASFD*
JGI12692J13336_1008301	JGI12692J13336_10083012	F040801	MVAKKKSKSRRDPSPAFNGRDLKVNGKGVPLRSQAEEAL
JGI12692J13336_1008388	JGI12692J13336_10083881	F099575	KPTGGFGTVVRTNEDDALVKWDDDGRMRLRQPWLKKVSSKVHPTPKPANA*
JGI12692J13336_1008502	JGI12692J13336_10085022	F010670	MTKFVLSALVAVTLMQSALSVAGDMSTDSRAKPSSFVPHSHTNTHVYGAPIHSAIVGNSKVSHHKQMPKKRSSSAPNRQSPP*
JGI12692J13336_1008572	JGI12692J13336_10085721	F056286	GYSAVLVRLSRVTPDVLRDLLGMAHKFVTAHAPRRLPSRNRRKPV*
JGI12692J13336_1008599	JGI12692J13336_10085991	F052896	MPDATPGNRGRSRQTVPRIGREEAARIFAQCEQLLDGSTVFVENLRQMGFARFLAPLNEQVLELAVQPDAWGERTRARLISYVFAGLRGSPVESAPVEEILQVSNVVVPCFLLELGRRRRHIGIEFPDNPCD
JGI12692J13336_1009018	JGI12692J13336_10090182	F042766	VLASDEDGGTLDALKFSLASDIIELVVLTSDDAFLQTLREAVGGARRLWHVPSADKVSDLLVAGEVGIVVLD
JGI12692J13336_1009122	JGI12692J13336_10091221	F066221	HIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQXGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLALNVRATDDSVVNFVASGDTRATLTDYMHSRGITDD*
JGI12692J13336_1009340	JGI12692J13336_10093401	F027277	MIKSKRFEPIHEIASNSARDLSRAMGDAGRKVAELERQLEQL
JGI12692J13336_1009486	JGI12692J13336_10094862	F063635	FRISHELYHGGWKIAFDTARPTLEIDKESVKRNRLVNLAARSMVLLSHER*
JGI12692J13336_1009559	JGI12692J13336_10095591	F028643	MAFIRLSRFKASAEVVSSILNWVCPECGGRMGGRGSEFXCHGEXQIDWRQLW
JGI12692J13336_1009974	JGI12692J13336_10099741	F010484	SATNTTSSASAKPPADGDDMPAAQPENESADPACQNYFSAYGLAPSQMKWIAQNRKKRFSNVCPAPDISKVDYVIIFTHDVDFFSATMPTPVHQAEGFSDFKAMTPMDSELMSASDADKAHRQYVWIFRFAPGTFDPSNFSPRRRYQFSTVESNGLGSKAGLKTVEDAFRFVS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001124: Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences