Metagenome / Metatranscriptome Family F066221

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066221
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	108 residues
Representative Sequence	DRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVNFVTSGDTRETLTNYLHSRGITDD
Number of Associated Samples	103
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.51 %
% of genes near scaffold ends (potentially truncated)	92.13 %
% of genes from short scaffolds (< 2000 bps)	88.19 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.701 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.984 % of family members)
Environment Ontology (ENVO)	Unclassified (37.008 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.992 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.60% β-sheet: 17.83% Coil/Unstructured: 63.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
d.3.1.4: Transglutaminase core	d1rlla2	1rll	0.59931
b.1.33.1: Membrane antigen precursor-like	d3pjla_	3pjl	0.55929
b.1.18.0: automated matches	d1wzla1	1wzl	0.54637
b.1.18.2: E-set domains of sugar-utilizing enzymes	d1j0ha1	1j0h	0.54029
b.1.9.1: Cytochrome domain of cellobiose dehydrogenase	d1pl3a_	1pl3	0.53559

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01476	LysM	91.34
PF03734	YkuD	3.15
PF03825	Nuc_H_symport	1.57
PF01464	SLT	0.79
PF06439	3keto-disac_hyd	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	3.15
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	3.15
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	1.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.70 %
Unclassified	root	N/A	6.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.70 %
Unclassified	root	N/A	6.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.70 %
Unclassified	root	N/A	6.30 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	81.89 %
Unclassified	root	N/A	6.30 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.57 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	14.96 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	7.87 %
Unclassified	root	N/A	6.30 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	7.87 %
Unclassified	root	N/A	6.30 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	4.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3.15 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.57 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	7.87 %
Unclassified	root	N/A	6.30 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	4.72 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	3.15 %
Gemmatimonadetes bacterium 21-71-4	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	1.57 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	7.87 %
Unclassified	root	N/A	6.30 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	3.15 %
unclassified Xanthomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae	3.15 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	1.57 %
Gemmatimonadetes bacterium 21-71-4	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	1.57 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	7.87 %
Unclassified	root	N/A	6.30 %
Xanthomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	3.15 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3.15 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1.57 %
Gemmatimonadetes bacterium 21-71-4	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	1.57 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000546\|LJNas_1019108	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300001124\|JGI12692J13336_1009122	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300001546\|JGI12659J15293_10063852	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300001867\|JGI12627J18819_10171085	All Organisms → cellular organisms → Bacteria → Proteobacteria	881	Open in IMG/M
3300002245\|JGIcombinedJ26739_100204690	All Organisms → cellular organisms → Bacteria → Proteobacteria	1865	Open in IMG/M
3300003220\|JGI26342J46808_1035088	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300003367\|JGI26338J50219_1018904	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300004080\|Ga0062385_10181855	All Organisms → cellular organisms → Bacteria → Proteobacteria	1117	Open in IMG/M
3300004082\|Ga0062384_100622244	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300004082\|Ga0062384_101245265	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300004092\|Ga0062389_100652291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1221	Open in IMG/M
3300004152\|Ga0062386_100562883	All Organisms → cellular organisms → Bacteria → Proteobacteria	929	Open in IMG/M
3300005610\|Ga0070763_10152325	All Organisms → cellular organisms → Bacteria → Proteobacteria	1208	Open in IMG/M
3300005712\|Ga0070764_10972484	Not Available	534	Open in IMG/M
3300005952\|Ga0080026_10202900	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	588	Open in IMG/M
3300006052\|Ga0075029_100073647	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300006086\|Ga0075019_10822085	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300006162\|Ga0075030_101569077	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300009088\|Ga0099830_10978577	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300010343\|Ga0074044_11123873	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300010876\|Ga0126361_11305943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	576	Open in IMG/M
3300011120\|Ga0150983_14629185	Not Available	508	Open in IMG/M
3300012923\|Ga0137359_10689151	All Organisms → cellular organisms → Bacteria → Proteobacteria	891	Open in IMG/M
3300012924\|Ga0137413_10947185	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300014501\|Ga0182024_10896145	All Organisms → cellular organisms → Bacteria → Proteobacteria	1069	Open in IMG/M
3300015051\|Ga0137414_1089995	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300015160\|Ga0167642_1058148	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300015197\|Ga0167638_1080016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	657	Open in IMG/M
3300015264\|Ga0137403_10826335	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300016371\|Ga0182034_11686792	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	557	Open in IMG/M
3300016404\|Ga0182037_12076272	Not Available	511	Open in IMG/M
3300019887\|Ga0193729_1070090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1385	Open in IMG/M
3300020021\|Ga0193726_1056153	All Organisms → cellular organisms → Bacteria → Proteobacteria	1865	Open in IMG/M
3300020021\|Ga0193726_1268108	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300020021\|Ga0193726_1314798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	598	Open in IMG/M
3300020034\|Ga0193753_10128644	All Organisms → cellular organisms → Bacteria → Proteobacteria	1230	Open in IMG/M
3300020034\|Ga0193753_10350332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	613	Open in IMG/M
3300020060\|Ga0193717_1112259	All Organisms → cellular organisms → Bacteria → Proteobacteria	847	Open in IMG/M
3300020061\|Ga0193716_1029632	All Organisms → cellular organisms → Bacteria	2681	Open in IMG/M
3300020061\|Ga0193716_1059920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1743	Open in IMG/M
3300020579\|Ga0210407_10750584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	755	Open in IMG/M
3300020579\|Ga0210407_11020872	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300020580\|Ga0210403_10137392	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300020580\|Ga0210403_10208044	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300020580\|Ga0210403_10954328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	673	Open in IMG/M
3300020581\|Ga0210399_11411432	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300020582\|Ga0210395_10659015	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300021088\|Ga0210404_10376042	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300021168\|Ga0210406_10040431	All Organisms → cellular organisms → Bacteria	4142	Open in IMG/M
3300021180\|Ga0210396_10254698	All Organisms → cellular organisms → Bacteria → Proteobacteria	1560	Open in IMG/M
3300021180\|Ga0210396_11072592	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300021181\|Ga0210388_11683541	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	525	Open in IMG/M
3300021401\|Ga0210393_10120313	All Organisms → cellular organisms → Bacteria → Proteobacteria	2098	Open in IMG/M
3300021403\|Ga0210397_10837185	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300021403\|Ga0210397_11590103	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	507	Open in IMG/M
3300021405\|Ga0210387_10102850	All Organisms → cellular organisms → Bacteria → Proteobacteria	2391	Open in IMG/M
3300021405\|Ga0210387_10629754	All Organisms → cellular organisms → Bacteria → Proteobacteria	952	Open in IMG/M
3300021405\|Ga0210387_10815599	All Organisms → cellular organisms → Bacteria → Proteobacteria	824	Open in IMG/M
3300021407\|Ga0210383_10863910	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300021407\|Ga0210383_10871667	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300021407\|Ga0210383_11440932	Not Available	571	Open in IMG/M
3300021420\|Ga0210394_10557596	All Organisms → cellular organisms → Bacteria → Proteobacteria	1007	Open in IMG/M
3300021420\|Ga0210394_10704795	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300021432\|Ga0210384_10420758	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300021474\|Ga0210390_10837077	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300021474\|Ga0210390_11614377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	510	Open in IMG/M
3300021475\|Ga0210392_10034033	All Organisms → cellular organisms → Bacteria → Proteobacteria	3024	Open in IMG/M
3300021479\|Ga0210410_10031190	All Organisms → cellular organisms → Bacteria	4622	Open in IMG/M
3300021479\|Ga0210410_10147711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2094	Open in IMG/M
3300021479\|Ga0210410_10639136	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300021479\|Ga0210410_10662978	All Organisms → cellular organisms → Bacteria → Proteobacteria	923	Open in IMG/M
3300021559\|Ga0210409_10548752	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300024288\|Ga0179589_10281880	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	744	Open in IMG/M
3300025463\|Ga0208193_1003336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	6112	Open in IMG/M
3300025625\|Ga0208219_1092181	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300025633\|Ga0208480_1161308	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300026215\|Ga0209849_1051515	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	720	Open in IMG/M
3300026274\|Ga0209888_1069729	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300026291\|Ga0209890_10082142	Not Available	1138	Open in IMG/M
3300026304\|Ga0209240_1057109	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300026557\|Ga0179587_10110733	All Organisms → cellular organisms → Bacteria → Proteobacteria	1673	Open in IMG/M
3300026557\|Ga0179587_10344906	All Organisms → cellular organisms → Bacteria → Proteobacteria	965	Open in IMG/M
3300027031\|Ga0208986_1034616	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	546	Open in IMG/M
3300027313\|Ga0207780_1077023	Not Available	560	Open in IMG/M
3300027504\|Ga0209114_1052876	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300027516\|Ga0207761_1112471	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300027545\|Ga0209008_1067313	All Organisms → cellular organisms → Bacteria → Proteobacteria	809	Open in IMG/M
3300027562\|Ga0209735_1080449	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300027701\|Ga0209447_10008792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2947	Open in IMG/M
3300027729\|Ga0209248_10044648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1366	Open in IMG/M
3300027768\|Ga0209772_10079653	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300027783\|Ga0209448_10129012	All Organisms → cellular organisms → Bacteria → Proteobacteria	846	Open in IMG/M
3300027829\|Ga0209773_10018802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	2694	Open in IMG/M
3300027895\|Ga0209624_10374174	All Organisms → cellular organisms → Bacteria → Proteobacteria	949	Open in IMG/M
3300027898\|Ga0209067_10641603	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300027911\|Ga0209698_11184185	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300028747\|Ga0302219_10184551	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
3300028773\|Ga0302234_10355990	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	627	Open in IMG/M
3300028801\|Ga0302226_10270401	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300028808\|Ga0302228_10039137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2330	Open in IMG/M
3300029636\|Ga0222749_10557348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	624	Open in IMG/M
3300029910\|Ga0311369_10698618	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300029944\|Ga0311352_10999306	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	644	Open in IMG/M
3300029951\|Ga0311371_10004239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	30515	Open in IMG/M
3300030520\|Ga0311372_10119306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	4703	Open in IMG/M
3300030693\|Ga0302313_10378213	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	563	Open in IMG/M
3300030872\|Ga0265723_1007429	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300030878\|Ga0265770_1160031	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300030940\|Ga0265740_1027983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	614	Open in IMG/M
3300031018\|Ga0265773_1032966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	565	Open in IMG/M
3300031028\|Ga0302180_10095272	Not Available	1713	Open in IMG/M
3300031057\|Ga0170834_101448661	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300031231\|Ga0170824_110571734	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300031231\|Ga0170824_114079747	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300031236\|Ga0302324_102714749	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	598	Open in IMG/M
3300031446\|Ga0170820_14644376	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	620	Open in IMG/M
3300031525\|Ga0302326_13725013	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300031708\|Ga0310686_107008837	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300031708\|Ga0310686_107813081	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300031715\|Ga0307476_10774298	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300031718\|Ga0307474_10068766	All Organisms → cellular organisms → Bacteria → Proteobacteria	2628	Open in IMG/M
3300031718\|Ga0307474_10681056	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300031718\|Ga0307474_10870339	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300031823\|Ga0307478_11608777	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300031910\|Ga0306923_12542609	Not Available	504	Open in IMG/M
3300031962\|Ga0307479_10334619	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300032180\|Ga0307471_101659781	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.21%
Host-Associated	Host-Associated	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.04%
Aquatic	Environmental → Aquatic	14.17%
Plants	Host-Associated → Plants	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.59%
Freshwater	Environmental → Aquatic → Freshwater	10.24%
Peat	Environmental → Terrestrial → Peat	9.45%
Sediment	Environmental → Aquatic → Sediment	3.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.84%
Loam	Environmental → Terrestrial → Soil → Loam	11.02%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.02%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	9.45%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.30%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.15%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.36%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.57%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.57%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.79%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.79%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300001124	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015160	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026274	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027031	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027504	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030872	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10191081	3300000546	Quercus Rhizosphere	SPTALTLVLDGGTRVLTPIDAPQLGRGAYQAAASWGQTAYFELTVEMLKQMAASAKLELDVRAADDSIVNFIASSDTRETLTDYLHSRGITDD*
JGI12692J13336_10091221	3300001124	Forest Soil	HIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQXGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLALNVRATDDSVVNFVASGDTRATLTDYMHSRGITDD*
JGI12659J15293_100638521	3300001546	Forest Soil	GAIVYGLWIHIAPGNDRPIADIRSPNALTLILDGGTRVLNPIDAPQLGRGAYQAVASWGQTAYFELTVQMLKQMAASEKLELNVRAADDSIVNFVASGDTREPLTAYLHSRGITDD*
JGI12627J18819_101710851	3300001867	Forest Soil	PGADRPLADIRSDGALTVVLDGSSRVLTPIDAPQLGRGAYQPVASWGQTGYFELTVEMLKQMSASEKFELNVRAADDSVVNFVASGDTRATFADYLHARGITDD*
JGIcombinedJ26739_1002046901	3300002245	Forest Soil	VPSLRQGGLHVITNLGKRLSFAYLGPVEWDRSGSIVYGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLALNVRATDDSVVNFVASGDTRATLTDYMHSRGITDD*
JGI26342J46808_10350882	3300003220	Bog Forest Soil	MADIRAPASLTLVLDGGPQVLQPIDAPPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSSVSFVPSVDTRPALSDYLRARGITDD*
JGI26338J50219_10189042	3300003367	Bog Forest Soil	GIVIFGKRTSFAYLGPVEWDRSGSYAYGLWIHVAPGNDRPMADIRAPASLTLVLDGGPQVLQPIDAPPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSSVSFVPSVDTRPALSDYLRARGITDD*
Ga0062385_101818552	3300004080	Bog Forest Soil	GGLHVITNLTKRLSFAYVGPVEWDRSGSIVYGLWVHIAPGTDRPVADIRSDGALTVVLDSGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKFELNVRAADDSVVNFAASGDTRATFTNYLHARAITDD*
Ga0062384_1006222442	3300004082	Bog Forest Soil	GQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSSVSFVPSVDTRPALSDYLRARGITDD*
Ga0062384_1012452652	3300004082	Bog Forest Soil	LVPIDAPQLGRGAYQPVAAWGQTAYFELTVEMLRQMAASEKLELDVRGADDSIVNFAASSNTRETLADYLHARGITAD*
Ga0062389_1006522912	3300004092	Bog Forest Soil	DDGPQVLIATDAPQLGQGAYQPVASWGQTGYFELTVEMLKQMAASKKLELDVRNADGSIVNFIATHDTSTTLEDYLRARGITGD*
Ga0062386_1005628831	3300004152	Bog Forest Soil	YLGPVEWDRSGSLVYGLWIHIAPGSDLSMADIRAPASLTLVLDGGPQVLVAIDAPPLGQGAYQPVASWGQTSYFELTVEMLKLMAASQKLQLDVRAVDGSIVSFVPTRDTRTTLSDYMLARGITGD*
Ga0070763_101523252	3300005610	Soil	SIVYGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLALNVRAADDSVVNFVASGDTRATLTDYMHSRGITDD*
Ga0070764_109724842	3300005712	Soil	PIELVPSLHQGGLHVFNSLGKKVSFAYIGPVEWDRSGAIVYGLWVHIAPGNDRPVVDIRSASALTLILDGGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLGLDVRAADGSTVNFIAAGDTRGTLTEYMHSRSITGD*
Ga0080026_102029002	3300005952	Permafrost Soil	VLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVNFVATGDTRETLTNYLHSRGITDD*
Ga0075029_1000736472	3300006052	Watersheds	SGSYAYGLWIHIAPGNDRPVADIRAPATLTLVLDDGPQVLQPIDAPPLGQSAYRPVASWGQTGYFNLSVQMLRLMAGSLKLQLDVRAADGSIVSFIPSSDTRPALSEYLRSRGITDD*
Ga0075019_108220852	3300006086	Watersheds	IHIAPGNDRPVADIRAPATLTLVLDDGPQVLQPIDAPPLGQSAYRPVASWGQTGYFNLSVQMLRLMAGSLKLQLDVRAADGSIVSFIPSSDTRPALSEYLRSRGITDD*
Ga0075030_1015690771	3300006162	Watersheds	VLQPIDAPPLGQSAYRPVASWGQTGYFNLSVQMLRLMAGSLKLQLDVRAADGSIVSFIPSSDTRPALSEYLRSRGITDD*
Ga0099830_109785771	3300009088	Vadose Zone Soil	VGRGAYQPVAPWGQTAYFELTVEMLKQMAASEKLELNVRAADDSIVNFVASGNTRGTLTAYLHSRGITDD*
Ga0074044_111238731	3300010343	Bog Forest Soil	IRAPGSLTLILDGGPRVLVWMDAPLFGQAAYRSVASWGQSGYFELTVEMLELMASSHKLQLDVRATDGSIVSFVPSGDARTILGEYLRGRGITGD*
Ga0126361_113059432	3300010876	Boreal Forest Soil	DRSGSIVYGLWVHIAPGNDRPIVDIRSPSALTLILDGGTRALTPIDAPQLGRGAYQPVASWGQTAYFELTPEMLKQMAASEKLELNVRATDDSVVNFAATGDTRATLAGYLHSRGITGD*
Ga0150983_146291852	3300011120	Forest Soil	MADIRAPASLTLVLDGGPQVLQPIDAPPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSIVSFVPSADTRPAFSDYLRARGITDD*
Ga0137359_106891511	3300012923	Vadose Zone Soil	GGLRVISSLTKKISFAYLGPVEWDRSGAIVYGLWIHIAPGNDHPIVDIRSPTALTLILDGGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSIVNFIATGGTREALTDYLHSRGITDD*
Ga0137413_109471852	3300012924	Vadose Zone Soil	LDGGTRVLTPLDAPQLGRGAYQAAASWGQTAYFELTVEMLKQMAASAKLELNVRAADDSIVNFIASSDTRETLTDYLHSRGITDD*
Ga0182024_108961452	3300014501	Permafrost	LGPVEWDRSGSIVYGLWVHIAPGTDRPIADIRSNAAVTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRATDDSIVNFVASGDTRETLTDYLHSRDITDD*
Ga0137414_10899952	3300015051	Vadose Zone Soil	RGAYQAVASWGQTAYFELTVEMLKQMAASQKLQLDVRAADDSIVNFVASNDTREPLTAYLHSRGITGD*
Ga0167642_10581481	3300015160	Glacier Forefield Soil	AIAYGLWIHIAPGNDRPIADIRSPKALTLVLDGGTRVLNPIDAPQLGRGAYEATASWGQTAYFELTVEMLKQMAASKTMELDVRAADDSIVNFIASSGTRETLTDYLHSRGITDD*
Ga0167638_10800162	3300015197	Glacier Forefield Soil	NLGKRLSFAYLGPVEWDRSGSIVYGLWVHVAPGTDRPIADIRSNAALTVVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVNFVATGDTRETLTNYLHSRGITDD*
Ga0137403_108263351	3300015264	Vadose Zone Soil	IADIRSPTALTLILDGGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSIVNFIATGGTREALTDYLHSRGITDD*
Ga0182034_116867921	3300016371	Soil	RSGSIVYGLWVHVAPGTDRPISDIRAPTALALILDSGTRVLSPIDAPQLGRGAYRPVASWGQTAYFELTVEMLRQMAASEKFQLDVRAADDSVVSFVATGDTRETLTDYMHSRGITGD
Ga0182037_120762722	3300016404	Soil	DRSGSIVYGLWVHVAPGTDRPISDIRAPTALALILDSGTRVLSPIDAPQLGRGAYRPVASWGQTAYFELTVEMLRQMAASEKFQLDVRAADDSVVSFVATGDTRETLTDYMHSRGITGD
Ga0193729_10700902	3300019887	Soil	MIGRSATALTLILDGGTRVLTPIDAPQVGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAAGDSVVNFIATGDTRETLTAYLHARGITDD
Ga0193726_10561533	3300020021	Soil	IADIRSNAAITIVLDNGTRVLTPIDAPQLGRGAYQAVASWGQTAYFELTVEMLKQMAASEKMELNVRAADDSIVNFVASGDTRETLSDYMHARGITGD
Ga0193726_12681081	3300020021	Soil	ILDGGTRVLSPIDAPQLGRGAYQAAASWGQTAYFELTVEMLKQMAASQKLELNVRAADDSIVNFIASGDTRETLTDYLHSRGITAD
Ga0193726_13147981	3300020021	Soil	PSVRQGGLHVITNLGKRLSFAYLGPVEWDRSGSIVYGLWVHIAPGTDRAIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADESVVSFVASGDTRATLTDYLHARGITDD
Ga0193753_101286442	3300020034	Soil	SLRQGGLHVITNLGKRLSFAYLGPVEWDRSGSIVYGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAGSEKLELNVRAADDSVVNFVASGDTRETLTDYMHARGITDD
Ga0193753_103503321	3300020034	Soil	IRSPTALTLILDGSTRVLTPIDAPQLGRGAYQAAASWGQTAYFELTVELLKQMATSQKLELNVRAADDSIVNFIASGDTRETLTDYLHSRGITDD
Ga0193717_11122591	3300020060	Soil	WIHIAPGNDRPIADIRSPTALTLILDGGTRVLTPIDAPQLGRGAYQAAASWGQTAYFELTVEMLRQMAASEKLELNVRAADDSIVNFIASGDTRETLTDYLHSRGITAD
Ga0193716_10296322	3300020061	Soil	ISFAYLGPVEWDRSGAIVYGLWIHIAPGNDRPIADIRSPTALTLILDGGTRVLTPIDAPQLGRGAYQAAASWGQTAYFELTVEMLRQMAASEKLELNVRAADDSIVNFIASGDTRETLTDYLHSRGITAD
Ga0193716_10599201	3300020061	Soil	VGKKISFAYLGPVEWDRSGAIVYGLWIHIAPGNDRPIADIRSPTALTLILDGGTRVLTPIDAPQLGRGAYQAAASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSMVNFIASSDTRETLTDYLHSRGITDD
Ga0210407_107505841	3300020579	Soil	HQSGLHLLTMGKRTSFAYLGPVEWDRSGTIVYGLWVHLAPGNDRAIVDIRSPAALTLILDSGARVLTPIDAPQLGRGAYQPVASWGQTGYFELTAEMLKEMAVSEKLELNVRATDDSVVNFTATGDTRTTLAGYLHSRGITGD
Ga0210407_110208721	3300020579	Soil	DGATRALTPIDAPQLGRGAYQPVASWGQTAYFELTAEMLKQMASSEKLALNVRATDDTIVNFAATGDTRATLAAYVHSRGIIDD
Ga0210403_101373921	3300020580	Soil	WDRSGSIVYGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQAVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVNFVASGDTRATLTEYLHSRGITDD
Ga0210403_102080442	3300020580	Soil	PGNDRSMADIRAPASLTLVLDGGPQVLQPIDAPPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSIVSFVPSADTRPAFSDYLRARGITDD
Ga0210403_109543281	3300020580	Soil	DGGPQVLQPIDAPPLGQGAYQPVASWGQTSYFKLTEEMLRLMAGSLKLQLDARAADGSIVSFVPGNDTRPALSEYLRARGITAD
Ga0210399_114114322	3300020581	Soil	MADIRAPASLTLVLDGGPQVLQPIDAPPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSIVSFVPSADTRPAFSDYLRARGITDD
Ga0210395_106590152	3300020582	Soil	LRVITSLGKRLSFAYLGPVEWDRSGSIVYGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQAVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSIVNFVASGDTRGTLREYLHARGITDD
Ga0210404_103760422	3300021088	Soil	DNGTRVLTPIDAPQLGRGAYQAVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSIVNFVASGDTRGTLREYLHARGITDD
Ga0210406_100404314	3300021168	Soil	VLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELDVRAADGSVVNFVASGDTRGTLTEYVHARGITGD
Ga0210396_102546981	3300021180	Soil	PVEWDRSGSIVYGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELDVRAADGSVVNFVASGDTRGTLTEYVHARGITGD
Ga0210396_110725922	3300021180	Soil	VYGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLELNVRAADDSVVNFVASGDTRATLADYLHSRGITDD
Ga0210388_116835412	3300021181	Soil	SGSIVYGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAGSDKLELDVRAADDSVVSFVASGATRETLTDYLHSRGITDD
Ga0210393_101203131	3300021401	Soil	GAYQPVASWGQTAYFELTVEMLKQMAASQKLALNVRAADDSVVNFVASGDTRATLTDYMHSRGITDD
Ga0210397_108371851	3300021403	Soil	LRVITNLGKRLSFAYLGPVEWDRSGSIVYGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLELNVRAADDSVVNFVASGDTRATLADYLHSRGITDD
Ga0210397_115901032	3300021403	Soil	YGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQVGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLELNVRAADDSIVNFVASGDTRGTLSQYLHSRGITDD
Ga0210387_101028501	3300021405	Soil	VITNLGKRLSFAYLGPVEWDRSGSIVYGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVNFVASGDTRETLTDYMHARGITDD
Ga0210387_106297542	3300021405	Soil	RGAYQAVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVNFVASGDTRATLTEYLHSRGITDD
Ga0210387_108155991	3300021405	Soil	SLGKKVSFAYIGPVECDRSGAIVYGLWVHIAPGNDRPVVDIRSASALTLILDGGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLGLDVRAADGSTVNFIAAGDTRGTLTEYMHSRSITGD
Ga0210383_108639102	3300021407	Soil	DIRSPKALTLVLDGGTRELNPIDAPQLGRGAYEAVASWGQTAYFELTAQMLKQMAASVKMELNVRAADDSIVNFVASSDTREPLTAYLHSRGITDD
Ga0210383_108716671	3300021407	Soil	DRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVNFVTSGDTRETLTNYLHSRGITDD
Ga0210383_114409321	3300021407	Soil	EWDRSGSYAYGLWIHVAPGNDRSMADIRAPASLTLVLDGGPQVLQPIDAPPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSIVSFVPSADTRPAFSDYLRARGITD
Ga0210394_105575962	3300021420	Soil	VGPVEWDRSGSYAYGLWIHVAPGNDRSMADIRAPASLTLVLDGGPQVLQPIDAPPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSIVSFVPSADTRPAFSDYLRARGITDD
Ga0210394_107047952	3300021420	Soil	IVYGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQAVASWGQTAYFELTVEMLKQMAASGKLELNVRAADDSIVNFVASGDTRATLTEYLHARGITDD
Ga0210384_104207581	3300021432	Soil	LDGGPQVLQPIDAPPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSIVSFVPSADTRPAFSDYLRARGITDD
Ga0210390_108370771	3300021474	Soil	SNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLALNVRAADDSVVNFVASGDTRATLTDYMHSRGITDD
Ga0210390_116143771	3300021474	Soil	YGLWVHSAPGNDRPVVDIRSPSALTLVLDGGTRTLTPIDAPQLGKGAYQPVASWGQTAYFELTPEMLKQMAASEKLELNVRATDDSIVNFTATADTRATLAAYVHARGITDD
Ga0210392_100340333	3300021475	Soil	PIDAPQVGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLELNVRAADDSIVNFVASGDTRGTLSQYLHSRGITDD
Ga0210410_100311901	3300021479	Soil	GRGAYQAVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSIVNFVASGDTRGTLREYLHARGITDD
Ga0210410_101477112	3300021479	Soil	VGSLKQPIELVPSVHSAGIVIFGKRTSFAYLGPVEWDRSGSYAYGLWIHVAPGNDRSMADIRAPASLTLVLDGGPQVLQPIDAPPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSIVSFVPSADTRPAFSDYLRARGITDD
Ga0210410_106391361	3300021479	Soil	AYQAVASWGQTAYFELTVEMLKQMAASGKLELNVRAADDSIVNFVASGDTRATLTEYLHARGITDD
Ga0210410_106629781	3300021479	Soil	WDRSGSFVYGLWIHIAPGSDQSMADIRATAALTLVLDSGPQVLEAIDAPALGQGAYRPVASWGQTSYFELSLEMLKRMAASQKLELDVRAVDGSTVSFVATRDTRTTLTDYLLARGITGD
Ga0210409_105487521	3300021559	Soil	ADIRSNAALTVVLDNGTRVLTPIDAPQLGRGAYQAVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSIVNFVASGDTRVTLTGYLHARGITDD
Ga0179589_102818801	3300024288	Vadose Zone Soil	PVEWDRSGSIVYGLWVHIAPGNDRPIADIRSNAAITIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLELNVRAADDSIVNFVASGDTRETLSDYMHARGITAD
Ga0208193_100333610	3300025463	Peatland	MLSNLGNLGKKVSFAYLGPVEWDRSGSIVYGLWVHIAPGNDRPIVDIRSPSALTLVLDGGTRALTPIDAPQLGRGAYQPVASWGQTAYFELTPEMLKQMAASEKLELDVRATDDSVVNFTATGDTRATLAAYVHSRGITDD
Ga0208219_10921812	3300025625	Arctic Peat Soil	LVPSLRQGGLHVITNLGKRLSFAYLGPVEWDRSGSIVYGLWVHIAPGTDRPVADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPIASWGQTAYFELTVAMLKQMAASEKLELNVRAADDSVVNFVASGDTRETLINYLHSRGITDD
Ga0208480_11613081	3300025633	Arctic Peat Soil	NALTLVLDSGTRVLSPIDAPQLGRGAYQPVASWGQTAYFELTVELLKKMAASEKFELNVRATDDSTVNFVASADTRATLTDYLHSRGITDD
Ga0209849_10515152	3300026215	Soil	GGLRAITNLGKRVSFAYLGPVEWDRSGSIVYGLWVHIAPGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLRQMAASEKLELNVRAADDSIVNFVASGDTRETLTDYLHARGITDD
Ga0209888_10697292	3300026274	Permafrost Soil	GLWVHIAPGTDLAVVDIRSAAALTLILDGGTRVLKPIDAPQLGRGPYQPVASWGQTAYFELTVEMLKQMAASQKLELNVRATDDSTVNFVAAGGARATLTDYLHARGITDD
Ga0209890_100821422	3300026291	Soil	SGAIVYGLWIHVAPGNDRPIADIRSAAALTLILDGGTRVLTPIDAPQVGRGAYQAVASWGQTAYFELTVEMLKQMAASEKLELNIRAADDSIVNFIATGDTRGTLTAYLHARGITDD
Ga0209240_10571091	3300026304	Grasslands Soil	ADIRSNAALTIVLDNGTRVLTPIDAPQVGRGAYQPVAPWGQTAYFELTVEMLKQMAASGKLELNVRAADDSIVNFVASGDTRGTLTKYLHSRGITDD
Ga0179587_101107331	3300026557	Vadose Zone Soil	IIANIGKRVSFAYLGPVEWDRSGSIVYGLWVHIAPGNDRPIADIRSNAAITIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLELNVRAADDSIVNFVASGDTRETLSDYMHARGITAD
Ga0179587_103449062	3300026557	Vadose Zone Soil	EWDRSGAIGYGLWIHIAPGNDRPIADIRSAAALTLNLDSGTRVLTPIDAPQLGRGAYQAVASWGQTAYFELTVDMLKQMAASQKLELDVRAADNSIVNFAATGDARGTLTGYLHARGITG
Ga0208986_10346161	3300027031	Forest Soil	GLWVHIAPGNDRPIADIRSAAALTIVLDNGTRVLSPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVNFVASGDTRATLTDYLHSRGITDD
Ga0207780_10770231	3300027313	Tropical Forest Soil	KKASFAYLGPVEWDRSGSIVYGLWVHIAPGADRPISDIRAPTALALILDSGSRVLAPIDAPQLGRGAYRPVASWGQTAYFELTVEMLRQMAASEKFQLDVRAADDSIVSFVATGDTRETLTDYLHARGITGD
Ga0209114_10528761	3300027504	Forest Soil	PRADIRSDGALTVVLDGSSRVLTPIDAPQLGRGAYQPVASWGQTGYFELTVEMLKQMSASEKFELNVRAADDSVVNFVASGDTRATFADYLHARGITDD
Ga0207761_11124711	3300027516	Tropical Forest Soil	PTALALILDSGSRVLAPIDAPQLGRGAYRPVASWGQTAYFELTVEMLRQMAASEKFQLDVRAADDSVVSFVATGDTRETLTDYLHSRGITGD
Ga0209008_10673132	3300027545	Forest Soil	PIDAPQLGKGAYQPVASWGQTAYFELTPEMLKQMAASEKLELNVRATDDSIVNFTATADTRATLAAYVHARGITDD
Ga0209735_10804491	3300027562	Forest Soil	FGKRPSFAYLGPIEWDRSGSFVYGLWIHIAPGSDQSMADIRAPAALALILDSGPQVLVAIDAPALGQGAYQPVASWGQTSYFELSVEMLKRMAASQKLELDVRAVDGSTVSFVATRDARTTLTDYLLARGITGD
Ga0209447_100087923	3300027701	Bog Forest Soil	MADIRAPASLTLVLDGGPQVLQPIDAPPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSSVSFVPSVDTRPALSDYLRARGITDD
Ga0209248_100446483	3300027729	Bog Forest Soil	VPTTATGGARLFGKRPSFAYLGPIEWDRSGSLVYGLWIHIAPGNDRPMADIRSAAALTLILDDGPQVLVPMDAPQLGQGAYQPIASWGQTGYFELTVEMLKLMAASQKLQLDVRAWDGSIVSFVPSGDTRTTLSDYLRARGITAD
Ga0209772_100796532	3300027768	Bog Forest Soil	APPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSSVSFVPSVDTRPALSDYLRARGITDD
Ga0209448_101290121	3300027783	Bog Forest Soil	RAPESLTLILDGGPHVLQPIDAPPLGQGAYQPVASWGQTSYFELTVDMLKLMAASQKLQLDARAADGSIVSFVPANDTRPALSEYLRARGITAD
Ga0209773_100188024	3300027829	Bog Forest Soil	MADIRAPASLTLVLDGGPQVLQPIDAPPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSSVSFVPSVDTRPALSDYLRA
Ga0209624_103741741	3300027895	Forest Soil	GAIVYGLWIHIAPGNDRPIADIRSPNALTLILDGGTRVLNPIDAPQLGRGAYQAVASWGQTAYFELTVQMLKQMAASEKLELNVRAADDSIVNFVASGDTREPLTAYLHSRGITDD
Ga0209067_106416031	3300027898	Watersheds	IHIAPGNDRPVADIRAPATLTLVLDDGPQVLQPIDAPPLGQSAYRPVASWGQTGYFNLSVQMLRLMAGSLKLQLDVRAADGSIVSFIPSSDTRPALSEYLRSRGITDD
Ga0209698_111841852	3300027911	Watersheds	VLQPIDAPPLGQSAYRPVASWGQTGYFNLSVQMLRLMAGSLKLQLDVRAADGSIVSFIPSSDTRPALSEYLRSRGITDD
Ga0302219_101845512	3300028747	Palsa	SFAYLGPVEWDRSGSIVYGLWVHIAPGTDHPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVTFVASGDTRETLTDYMHSRGITGD
Ga0302234_103559901	3300028773	Palsa	RQGGLHVITNLGKRVSFAYLGPVEWDRSGSIVYGLWVHIAPGTDHPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVTFVASGDTRETLTDYMHSRGITGD
Ga0302226_102704011	3300028801	Palsa	NAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVTFVASGDTRETLTDYMHSRGITGD
Ga0302228_100391371	3300028808	Palsa	LILDSGPVVLTAIDAPQLGRGAYQPVASWGQTAYFDLTVEMLKQMAASKTLELNVRNADDSIVNFVPTVDTQAALTGYLRARGITGD
Ga0222749_105573481	3300029636	Soil	DGGPQVLQPIDAPPLGQGAYQPVASWGQTSYFKLTEEMLRLMAGSLKLQLDARAADGSIVSFVPGSDTRPALSEYLRARGITAD
Ga0311369_106986182	3300029910	Palsa	TRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVTFVASGDTRETLTDYMHSRGITGD
Ga0311352_109993061	3300029944	Palsa	STVTRGAHLFAKHPSFAYLGPIEWDRSGNLVYGLWVHIAPGNDRPIADIRSDAAVTLVLDSGSQVLSPIDAPQLGKSAYQPVASWGQTAYFELTVAMLKQMAASEKFELNVRNANDSIVSFVPTGDTRETLTNYLTARGISSD
Ga0311371_1000423927	3300029951	Palsa	MVPSAPRVGVFQFGKRPSFAYLGPIEWDRSGSLVYGLWIHIAPGNERATADIRAPSALTLILDSGPVVLTAIDAPQLGRGAYQPVASWGQTAYFDLTVEMLKQMAASKTLELNVRNADDSIVNFVPTVDTQAALTGYLRARGITGD
Ga0311372_101193064	3300030520	Palsa	MVPSAPRVGVFQFGKHPSFAYLGPIEWDRSGSLVYGLWIHIAPGNERATADIRAPSALTLILDSGPVVLTAIDAPQLGRGAYQPVASWGQTAYFDLTVEMLKQMAASKTLELNVRNADDSIVNFVPTVDTQAALTGYLRARGITGD
Ga0302313_103782131	3300030693	Palsa	TPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVTFVASGDTRETLTDYMHSRGITGD
Ga0265723_10074291	3300030872	Soil	LDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVNFVASGDTRATLTDYLHARGITDD
Ga0265770_11600311	3300030878	Soil	VLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLALNVRAADDSVVNFVASGDTRATLTDYMHSRGITDD
Ga0265740_10279832	3300030940	Soil	APGTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLELNVRAADDSVVTFVASGDTRETLTDYMHSRGITGD
Ga0265773_10329662	3300031018	Soil	ADIRSNAAVTVVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLELNVRAADDSVVNFVASGDTRATLTDYMHSRGITDD
Ga0302180_100952722	3300031028	Palsa	IEMVPSAPRVGVFQFGKRPSFAYLGPIEWDRSGSLVYGLWIHIAPGNERATADIRAPSALTLILDSGPVVLTAIDAPQLGRGAYQPVASWGQTAYFDLTVEMLKQMAASKTLELNVRNADDSIVNFVPTVDTQAALTGYLRARGITGD
Ga0170834_1014486612	3300031057	Forest Soil	LAPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVNFVASADTRATLTDYMHARGITDD
Ga0170824_1105717341	3300031231	Forest Soil	PRVLTPIDAPQLGRGAYQPVASWGQTGYFELTVEMLKQMAASGKMELNVRATDDSIVNFVASADTRATLTDYMHSRGITGD
Ga0170824_1140797472	3300031231	Forest Soil	LTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVNFVASADTRATLTDYMHARGITDD
Ga0302324_1027147491	3300031236	Palsa	QPVASWGQTAYFDLTVDLLKQMAASKTLELQVRNTDESVVNFVPTVDAHSALTDYLRARGITAD
Ga0170820_146443762	3300031446	Forest Soil	YGLWVHIAPGNDRPIADIRSNAAITIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASGKLELNVRAADDSIVNFVASSDTRETLSDYMHARGITAD
Ga0302326_137250131	3300031525	Palsa	NGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLALNVRAADDSVVNFVASGDTRATLTDYMHSRGITDD
Ga0310686_1070088371	3300031708	Soil	PGNDRSMADIRAPASLTLVLDGGPQVLHPIDAPPLGQGAYQPVASWGQTAYFELTVQMLKLMAASEKLQLDVRAADGSIVSFVPSADTRPAFSDYLRARGITDD
Ga0310686_1078130811	3300031708	Soil	IDAPQLGRGAYQPVASWGQTAYFELTAEMLKRMAVSEKLELNVRATDDSVVNFAATGDTRTTLAGYLNSRGITGD
Ga0307476_107742981	3300031715	Hardwood Forest Soil	TRVLTPIDAPQLGRGAYQAVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSIVNFVASGDTRGTLREYLHARGITDD
Ga0307474_100687661	3300031718	Hardwood Forest Soil	GTDRPIADIRSNAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLALNVRAADDSVVNFVASGDTRATLTDYMHSRGITDD
Ga0307474_106810562	3300031718	Hardwood Forest Soil	VHLAPGNDRAIVDIRSPAALTLILDSGARVLTPIDAPQLGRGAYQPVASWGQTGYFELTAEMLKEMAVSEKLELNVRATDDSVVNFAATGDTRTTLAGYLHSRGITGD
Ga0307474_108703391	3300031718	Hardwood Forest Soil	LHQQGGSSMHVLGSLLGKKVSFAYLGPVEWDRSGAIVYGLWVHIAPGNDRPIADIRSPKALTLVLDGGTRELNPIDAPQLGRGAYEAVASWGQTAYFELTAQMLKQMAASVKMELNVRAADDSIVNFVASSDTREPLTAYLHSRGITDD
Ga0307478_116087772	3300031823	Hardwood Forest Soil	APGTDHPIADIRSSAALTIVLDNGTRVLTPIDAPQLGRGAYQPVASWGQTAYFELTVEMLKQMAASQKLELNVRAADDSVVTFVASGDTRATLTDYMHSRGITGD
Ga0306923_125426091	3300031910	Soil	SLSKKSSFAYLGPVEWDRSGSIVYGLWVHVAPGTDRPISDIRAPTALALILDSGTRVLSPIDAPQLGRGAYRPVASWGQTAYFELTVEMLRQMAASEKFQLDVRAADDSVVSFVATGDTRETLTDYMHARGITGD
Ga0307479_103346192	3300031962	Hardwood Forest Soil	SPAALTLLLDGGTRVLTPIDAPQVGRGAYQPVASWGQTAYFELTVEMLKQMAASEKLELNVRAADDSVVNFIAAGETRGALTAYLHARGIADD
Ga0307471_1016597812	3300032180	Hardwood Forest Soil	FAYLGPVEWDRSGSIVYGLWVHIAPGTDRPVADIRSNAALTIVLDNGTRVLTPIDAPQTGRGAYQPVAPWGQTAYFELTVEMLKQMAASEKLELNVRAADDSIVNFVASSDTRATLTEYLHARGITDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066221

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences