Sample 3300000425

3300000425: Marine microbial community from Union City, CA, USA - Pond 2C Liquid 2

Overview

Basic Information
IMG/M Taxon OID	3300000425 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0053056 \| Gp0053722 \| Ga0026461
Sample Name	Marine microbial community from Union City, CA, USA - Pond 2C Liquid 2
Sequencing Status	Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	131906500
Sequencing Scaffolds	38
Novel Protein Genes	42
Associated Families	40

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	24
All Organisms → Viruses → Predicted Viral	9
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Environmental Microbial Communities From Fremont, Ca And La Paraguera, Puerto Rico
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Unclassified → Unclassified → Enviromental → Environmental Microbial Communities From Fremont, Ca And La Paraguera, Puerto Rico

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → pond → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Eden Landing Ponds, San Francisco, CA, USA
Coordinates	Lat. (^o)	37.569017	Long. (^o)	-122.102433	Alt. (m)	N/A	Depth (m)	.11
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001583	Metagenome / Metatranscriptome	668	Y
F002035	Metagenome / Metatranscriptome	601	Y
F002322	Metagenome / Metatranscriptome	571	Y
F002542	Metagenome / Metatranscriptome	550	Y
F006007	Metagenome / Metatranscriptome	384	Y
F006817	Metagenome	364	Y
F008104	Metagenome / Metatranscriptome	339	Y
F008384	Metagenome	334	Y
F009033	Metagenome / Metatranscriptome	324	Y
F010166	Metagenome / Metatranscriptome	307	Y
F010768	Metagenome / Metatranscriptome	299	Y
F013136	Metagenome	274	Y
F014556	Metagenome / Metatranscriptome	262	Y
F014668	Metagenome	261	Y
F014905	Metagenome	259	Y
F015658	Metagenome	253	N
F027015	Metagenome	196	Y
F027314	Metagenome / Metatranscriptome	195	Y
F027794	Metagenome / Metatranscriptome	193	Y
F029712	Metagenome / Metatranscriptome	187	Y
F029730	Metagenome / Metatranscriptome	187	Y
F041087	Metagenome / Metatranscriptome	160	Y
F045051	Metagenome / Metatranscriptome	153	Y
F045999	Metagenome / Metatranscriptome	152	Y
F047500	Metagenome	149	Y
F047926	Metagenome / Metatranscriptome	149	N
F048336	Metagenome / Metatranscriptome	148	Y
F048584	Metagenome	148	N
F050952	Metagenome / Metatranscriptome	144	Y
F056575	Metagenome / Metatranscriptome	137	Y
F058533	Metagenome / Metatranscriptome	135	Y
F059656	Metagenome / Metatranscriptome	133	N
F062795	Metagenome / Metatranscriptome	130	Y
F063692	Metagenome / Metatranscriptome	129	N
F067102	Metagenome / Metatranscriptome	126	Y
F074028	Metagenome	120	Y
F081345	Metagenome / Metatranscriptome	114	Y
F088282	Metagenome / Metatranscriptome	109	N
F092867	Metagenome	107	N
F093310	Metagenome	106	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
P_2C_Liq_2_UnCtyDRAFT_1000624	Not Available	9396	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1005051	All Organisms → Viruses → Predicted Viral	2810	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1005216	All Organisms → Viruses → Predicted Viral	2756	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1007330	All Organisms → Viruses → Predicted Viral	2277	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1009740	Not Available	1913	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1013921	All Organisms → Viruses → Predicted Viral	1500	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1014633	All Organisms → Viruses → Predicted Viral	1449	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1015111	All Organisms → Viruses → Predicted Viral	1415	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1016036	Not Available	1357	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1017504	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1274	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1018400	All Organisms → Viruses → Predicted Viral	1229	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1019491	All Organisms → Viruses → Predicted Viral	1175	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1020656	Not Available	1126	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1023548	All Organisms → Viruses → Predicted Viral	1018	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1029656	Not Available	853	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1031381	All Organisms → cellular organisms → Eukaryota	816	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1031864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	806	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1035845	Not Available	739	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1038192	Not Available	704	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1038462	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	700	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1039432	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	688	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1040656	Not Available	672	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1040706	Not Available	671	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1041753	Not Available	659	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1045095	Not Available	623	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1047970	Not Available	596	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1051472	Not Available	567	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1051770	Not Available	565	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1052263	Not Available	561	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1053608	Not Available	551	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1056486	Not Available	531	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1056498	Not Available	531	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1057418	Not Available	525	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1058556	Not Available	517	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1059198	Not Available	513	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1059267	Not Available	513	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1059902	Not Available	509	Open in IMG/M
P_2C_Liq_2_UnCtyDRAFT_1060525	Not Available	506	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
P_2C_Liq_2_UnCtyDRAFT_1000624	P_2C_Liq_2_UnCtyDRAFT_10006243	F045051	MLHTIEELIQRLDVMKDKAIELHRVRNQYSELSGKTYNQAYANALLDDIQTMALMIAQDRDGDEIKTEMDYKNV*
P_2C_Liq_2_UnCtyDRAFT_1005051	P_2C_Liq_2_UnCtyDRAFT_10050518	F056575	EGVENKRWWSFEDDGPLGNGTRAKVQFETYSKGAGVRLINLGVTDHIPYEDTYVANPDDELFNMDAA*
P_2C_Liq_2_UnCtyDRAFT_1005216	P_2C_Liq_2_UnCtyDRAFT_10052169	F002035	MGEQVANNREMQEVMYLHQKDDKWYILSEPKSPGLVKKEYIPIGNRLVYPKKWGRKKAASVLLEYLIDDNEKIKDSAIERLEVLYK
P_2C_Liq_2_UnCtyDRAFT_1007330	P_2C_Liq_2_UnCtyDRAFT_10073301	F027314	MSCTVTLADIIYSCDDLGVGGIVELHIANKLSAEAALTGVGSADRAITAATAVSGIVNLGFNLKDGFSVFSEVKTVNADGTTSTVPTISVELPKMDADKITSLNNISKGGAELVAFVKTAAGTYHVSGLDYGLYAATVDGNSGTGRAEKNRFQ
P_2C_Liq_2_UnCtyDRAFT_1009740	P_2C_Liq_2_UnCtyDRAFT_10097401	F059656	MSTKIKFVNFIAAILLTLSCSSNHCKSTVCPENFTCEDGQCVCDEYHTGNNCEIELRETFYGTFTGIMNVYNEDFVLINSIEKSITVKDSTSDPTIMAIDDLVAFIDSRTRSFIFSIAKQDTSTNIQTEIRGYGGLDNDELDFNYTETTQSVGPNLFPVIYKHYHFTGIR*
P_2C_Liq_2_UnCtyDRAFT_1013921	P_2C_Liq_2_UnCtyDRAFT_10139213	F048336	KVRIAKIAVDKWGGSYEKVLAKAEASLKSGKLPSYKEHLNVQGDDTQDSYDIFQGRNAVQLAEKISKVIKKYKKYEVEQSTTGAAAGWSGTARATVSGDIKGRANFSNGSNSYLIAVTCGGGIDRSIKDKMFQEIYELMFVLDQYNSSDGGVMFNVDSGTNYDTIGLQNSSYSFNNSMASKLENIMNN*
P_2C_Liq_2_UnCtyDRAFT_1014633	P_2C_Liq_2_UnCtyDRAFT_10146331	F008104	MGLLSNISEFFASDTYVQATEHSIATNELENSIEDLNARYKLGHTLVGDYIKFGVNDDFPVILEKMLRQSPVHSGILTKKAKMVVGNDISYTDEFLTTNKSKAELKAFINHCGGNNKGLYEVLTHAAFQYEHKGALALYVRWNKE
P_2C_Liq_2_UnCtyDRAFT_1015111	P_2C_Liq_2_UnCtyDRAFT_10151112	F002322	MSKKLPYSKNVEXHILNCIQGGVGIRDMIASMQHLQDAPKSLSTMYSTYGDTIHAERARINGQVGKKVIDQALEGDFKSQEFFLRSRGGWSPTQTVVEAEQDTDPEYDESAVDVMMGLLGFDSNDPDEDEQEKTDG*
P_2C_Liq_2_UnCtyDRAFT_1016036	P_2C_Liq_2_UnCtyDRAFT_10160361	F013136	LCGFFCLAFIYFLSISKFRTKNIINDASIFLDLFEDLDLINDVYKNEFILSLFFTDKESKSLLMGNNNIGMSKENKIDNRFSIEDKKLRN*
P_2C_Liq_2_UnCtyDRAFT_1017504	P_2C_Liq_2_UnCtyDRAFT_10175043	F010768	MKEVLNGGYNVHPVPPPNSENKERITKRYERERIKIEKLFTLGYTTSGDP*
P_2C_Liq_2_UnCtyDRAFT_1018400	P_2C_Liq_2_UnCtyDRAFT_10184001	F010166	DAKEGSVEEVTWNSNDLLTLPWEATYMTDEIPDDSSWDTFATKNKKALEAMYKQWGVPKEGSLHYMSIRPQLTNGLSTIIAPYAHMKFNYNFLKLTPGCSLMWHFDTYATFVRYNNIDEDDIHNVCRTVVMMRDWDRGQVLQVGDEVYTHWSAGDTYTWKGDTWHGMANFGPTDIVVSQITFLDEDDQYTQ*
P_2C_Liq_2_UnCtyDRAFT_1019491	P_2C_Liq_2_UnCtyDRAFT_10194911	F006007	LYVANPYSGNPYYGVPNYISAFHYIESDFSFGKHIKNSAXNGFTPKVLATFIGRNMSSEQKRDEYNKFKESFTGPSADNFIVSWVKKEEDAPTFKPLDVANLDKTIDVLSKLNDAKILTAHNVTSPTLFGVMVSGKLGGTGNELVTAYQIFRATETLPNREILLDSVNRIFATIGYDGMDLGIVEQQINLESIKGANTEDV*
P_2C_Liq_2_UnCtyDRAFT_1020656	P_2C_Liq_2_UnCtyDRAFT_10206561	F088282	AIPTMIEDSYDGRRKVWRATSVFVSLALYSEGEKRMFYLDLANHIARTDSDQTYAAVLLLEYVESIGSGGLEKRRSMLLAYVQAYEEEIGIEFAERIYAFLGEK*
P_2C_Liq_2_UnCtyDRAFT_1020656	P_2C_Liq_2_UnCtyDRAFT_10206562	F063692	MKKLVAVAFVSITLVLMVLFSREKDKVQRLVNDRYKAACDFYFSGVVVDVANDFDVHRCMLRLELDTSTIANFDVRDTTAYYHAVIDGTDAEVIESIIYDHSTSGQANFIRPGMRYTFDGEVDSAYLFLADTLVESWPIQISTFGLMDVARFHQIPMAGGKTAVQRNKGWWPRLR*
P_2C_Liq_2_UnCtyDRAFT_1023548	P_2C_Liq_2_UnCtyDRAFT_10235481	F014668	TELSKLYVSHVSNLTAGTSGVKSPVVQYSVKATIMLKDIHPLFEVMPISKSLNFKIQIFWNNSVITATHDGTDWSSQSSQYRAYNGTLPLMLNNFTDGFAGSPAGTLRASVYVGDTCHDSTQRSVTNNGLSTGGVGKQVELWVPAYQMLPDVEMSYAQNHMRDISYFDYYQYGLKNIASGESFNHLVSNGISNLKAVLIVPQLNSLNNNVNAFDDGLPQLMGHINNFNVLVGGANVLHQDSRYTYQQFNNEFFNEHGVNGNQSTGLGSSLIDFKSWLKKPYYYVNCSRVPQEQQNAYRSLQLKGTNSSSLAVDYVIFAIYEKQFQLDVISGNITKTD*
P_2C_Liq_2_UnCtyDRAFT_1029656	P_2C_Liq_2_UnCtyDRAFT_10296562	F027794	MKLTVQTLQQMMQYLRNVAEADTNDEIANAASSLAFRLEAAGTSVFDMPMQFEAWSELDQAVARYAIDKRGVYVLHVGAKHAVDTRKETV*
P_2C_Liq_2_UnCtyDRAFT_1031381	P_2C_Liq_2_UnCtyDRAFT_10313811	F074028	MSSVSDHVQMMKSQETKYDSVFNKREWLSINDTTTQYDQGTSILETTALSNNSKFLDYNSGYLSVPLLVTLTSNASEITGIADTGVLPYTKSVGFKQSFLSMINSITVDLNGQPMVQQNQLIDMYNHFRLLTSESWTSQNRWSTIGFYPDVADVAGFSTADTKYAPAGQPANNDTFNIGLTERLKYVLDDAGRTFDGEVESALSNLISKTELSKLYVSHVSNLTAGT
P_2C_Liq_2_UnCtyDRAFT_1031864	P_2C_Liq_2_UnCtyDRAFT_10318643	F062795	MKIQINKVDQQHFIDFVNKLKVIDSFIYFKIKGDGVQASAYLPQRDAVKHHRMPLAEIFQIEGGIDTDKELKIAFFDASRLTDAFKQFEYDSIQGEIEFVENEEDFVASSFRIFNDELEITLACSEPSLGYKDLTDSQIQAIFDVSGASYKFDMDYTTLSKARSVFNLDKDETF
P_2C_Liq_2_UnCtyDRAFT_1035845	P_2C_Liq_2_UnCtyDRAFT_10358452	F029730	MSRSDSDISAQDATDALLALARLLGRIAAQDVVDQSLLDTPPPQSQQKGACDDE*
P_2C_Liq_2_UnCtyDRAFT_1036658	P_2C_Liq_2_UnCtyDRAFT_10366581	F067102	VDLFPEQQLEYDLDFYDSVEIDKVKLPFYTKLRIPLTTNNKASNRFDFDPITSPALEFPKQDFYFKITVFGSSSTEIAGILNVVSFEYNSAQSYIEVELKDYLSKYLAKVKDTKLGELYTDNYYTQRRTLNQFRANTASGGEAGIKGTNPDYTRPISFPYIDFCNDVDGKFGYGARQFLEYGTGIDRTGIMPVFSVKGFLQYLTSYISTASFPLRVDSKLFALGDYAAAPSFSDFQAEKL
P_2C_Liq_2_UnCtyDRAFT_1038192	P_2C_Liq_2_UnCtyDRAFT_10381921	F058533	IVEIKIDLDSSIYNRSVCGPDASDMDGNQNFQNGAFNEKELGFTPNIFTKNKDVGLRFAYLDKPLVDTNLKIPFIKLKGDDQSGQMITETERIYIDLGQHTFNGRLFPVNTAGWNLMFEDEDGNTTDTYDNIFAASEKILQSENPRIEFDMVVPTSNLASLDFFLQTLSCTRITPGGILVKSASGDVYDDYAYITIEGILQ*
P_2C_Liq_2_UnCtyDRAFT_1038462	P_2C_Liq_2_UnCtyDRAFT_10384621	F029712	DLDYVYNICADKLEGKKVKKIFPKIITEWDRVETNFKLMNLHETSLDDKEKNHILKIIKSEIPALQTGAFLHLLDQDKIEGITKNTEGWLENFRGLTVIKQ*
P_2C_Liq_2_UnCtyDRAFT_1038564	P_2C_Liq_2_UnCtyDRAFT_10385641	F092867	KECLAYRTNKDNKVVPLDTFKAMTRAEKKQEDFGHCGDCRACWSKDVANISYPRH*
P_2C_Liq_2_UnCtyDRAFT_1039432	P_2C_Liq_2_UnCtyDRAFT_10394321	F001583	SLSASHLSDLTLTIIANIFSVFNNIYKTYYIIFTNKHLNVDQLTRLMILHYFTPYYLYLVKLHVLFCHESDTDSGENVYEDKSGSYVSFYDAFLKEIQDAWYTLYVFVYFFLHHFNGATVNYFFFERNIAELDEVRFYGVAPH*YFRPLMGILVISPTHYEGLMWMGLFFILLAFLPIFYNFYNVYHKYVATIPMQNSLLQTSFFVFFMMSLYCTASMLPCGR
P_2C_Liq_2_UnCtyDRAFT_1040656	P_2C_Liq_2_UnCtyDRAFT_10406562	F047500	MNITLDLSKGQLSKLRNGHGIRINPTMFGSGVDLIIDPMTYHNMAKKLDKGKGVVIKMGSNEIDMNKMEGTGLFAGAGNKSGKISRIKKARKWRDFSDDTLRKGIDTASYGYKEFQKAKNPISSKVKSWFGAGMEDESESEDDEVQGGKISFKGIKKAYNKNVKNTKLGKALKGSAEKG
P_2C_Liq_2_UnCtyDRAFT_1040706	P_2C_Liq_2_UnCtyDRAFT_10407061	F048584	MTIKSDFQLTEYCNAIAEDIARDASDFEQATDWAHESADGSEHVIYTYKAHQVCQNCDIDSGLEFFNDCYGDEHGRSYDEIASIMAYGEIN
P_2C_Liq_2_UnCtyDRAFT_1041753	P_2C_Liq_2_UnCtyDRAFT_10417533	F008384	MERYDKKKIELEALLSVQQGAITNELGKFILQRSIEIAGSAFVTAGNSELNQALVDAAVMRTCEKFLHYYKEGKSAANLIISIIYSTMTNKIVSLNHSDTYGHNIKGYLVLIEDGRSVTKLKRYI
P_2C_Liq_2_UnCtyDRAFT_1045095	P_2C_Liq_2_UnCtyDRAFT_10450952	F014905	MKPVPFHKLSPKMKNIRMNQWIKTYIGRGLSLEDAQYAARWRAGHWKLSARMEKVLADIEDV*
P_2C_Liq_2_UnCtyDRAFT_1047970	P_2C_Liq_2_UnCtyDRAFT_10479701	F041087	VNDPLNDLQALYLMLQSVPKDVLIAYLPETDEETV*
P_2C_Liq_2_UnCtyDRAFT_1051472	P_2C_Liq_2_UnCtyDRAFT_10514721	F009033	LSYLILSSTDAEIHFVNQIRCWKTRPWQEHVADNVMQWFKEHFDNSIKIHRNFIPPDLEWADKGPNIIDEYGKLKSGNQICLRSHNEYIIHKESLDAWYAAVNKNPDVPFDGALEDRDTGHVPQHMKHMKIDICHPFVYTMKDWIIQQYYEHDILDLLELTRSCEGEFEGIDYKTYTPGDSVPECKEC
P_2C_Liq_2_UnCtyDRAFT_1051770	P_2C_Liq_2_UnCtyDRAFT_10517701	F027015	MFHKSKTEAERQKIFDDYILSILKQKQVVKKNKKIIDEQEFSYDPTMDEDKVKGAFNSYVDSLVVKNFLIEQLYTRLKINKNMALNFVNKLDGNQVLILSKVINEFIQDIQDKYVSINXYILKTSFDELQGNYNVIQQQEKDNEIVKQNQVEQGQVLQEN
P_2C_Liq_2_UnCtyDRAFT_1052263	P_2C_Liq_2_UnCtyDRAFT_10522631	F002542	MHPTYLGWQVDWPVFIKRPLMADSKTWSQGEHFNWLERGIDQDKVATLYAAGYIHHNKELEVQTKVGDRLSELSGKQLETLVNLLNAEVKARTSSTSEFETKKCKKSKIDDKQRGLIRRFLNNNRWVTEDFYTIRDKILND*
P_2C_Liq_2_UnCtyDRAFT_1053608	P_2C_Liq_2_UnCtyDRAFT_10536081	F041087	VNDPLNDLQALYLMLQSVPKDVLIAYLPEEESADV*
P_2C_Liq_2_UnCtyDRAFT_1055475	P_2C_Liq_2_UnCtyDRAFT_10554752	F081345	FEVDNVREDQLIGGQSGEKFSIICSTFMTRRSSIQTEMRVI*
P_2C_Liq_2_UnCtyDRAFT_1056486	P_2C_Liq_2_UnCtyDRAFT_10564861	F093310	VHMDYYLGVMGQALLGDAELEKALYFCVGVGGNNGKTLILEALADIMPNYVSKIERKTFEKGYTKAHKHLAGTKGKRIVYVEELSTKEQEIELLKEIADGKNVKNEIMFGTDELINIMFKLVFLSNCQANMKVDGGIGNRYRQLCHNSKFNKETTEDNYETLDFVQDKSLAGLLKG
P_2C_Liq_2_UnCtyDRAFT_1056498	P_2C_Liq_2_UnCtyDRAFT_10564981	F047500	MNVTLDLSQGQLSKLRNGHGIRISPAMFGSGAEMILDPMTYNNMMKKLNKGKGVVIKMGSNEIEQNKMEGTGLFAGAGNKSGKISRIKKARKWRDFSNDTLRDGIDTAAYGYKAYQKAVNPVTSEVKSWFGGGAEESDEENDEVQGGKISFKG
P_2C_Liq_2_UnCtyDRAFT_1057418	P_2C_Liq_2_UnCtyDRAFT_10574181	F045999	QRQVLGQKGLRLIGASGSGQAGEFYRAITATDDAVISATAEAGDSLVSVTIPAGVTVYGLFSTISVTSGKIIAYIA*
P_2C_Liq_2_UnCtyDRAFT_1058556	P_2C_Liq_2_UnCtyDRAFT_10585561	F014556	MRESIYEVDAKYKQLAIVGRQMMDMSEYANCKGFKEEDFRLLNDMSHVGNLLTKLGNTFGPKPEDFTEADRELVARFI
P_2C_Liq_2_UnCtyDRAFT_1059198	P_2C_Liq_2_UnCtyDRAFT_10591981	F006817	VMTQNGHVMTNVETDTTIYFIDILVNNTKYSIDVITYPVPTXLPEDFTSSITFPSVAKNPRLKLPSGMNDIFGYEEDFTTDAGSEIQTYNSTKAPNVSPDSSVLVVCDQVENQFSNLGILYAISPSVPIGSLIVDRPAEAVYSKLKNGSYNHLTFRVLSSKTFRPIEIVD
P_2C_Liq_2_UnCtyDRAFT_1059267	P_2C_Liq_2_UnCtyDRAFT_10592671	F050952	MQNYVFLNAANAAIVVTVNNVCVANDVQTADALVEVFLQNNINVLTDTIMCSSSIDFAEEEGFASD
P_2C_Liq_2_UnCtyDRAFT_1059902	P_2C_Liq_2_UnCtyDRAFT_10599021	F015658	SKFIPDEVRTKKNNLKILSVMEGLMIGSGYGIQFPVSKNQDEYISIGKYKAHKTKLMGGKLQMRSNNNNQIHNLKSQNITKNIRDILLKLNKDETINFSDVDKLNTDEKDQXYMIGKKLHITQLFDIPSTLKSQEDKLKDEFLLLRGSLIAGNNNPDLLRKFKIVILKM
P_2C_Liq_2_UnCtyDRAFT_1060525	P_2C_Liq_2_UnCtyDRAFT_10605252	F047926	MYIEIAKNTWAYAKDEKDAERIRAKYKGYKKKQGDLTSRHFIVNHIEETNFIK*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300000425: Marine microbial community from Union City, CA, USA - Pond 2C Liquid 2

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences