Sample 2140918002

Basic Information
IMG/M Taxon OID	2140918002 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0046933 \| Gp0052277 \| Ga0010919
Sample Name	Rhizosphere and bulk soil microbial communities from the Great Lakes - Sample MSB1
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	9701071
Sequencing Scaffolds	60
Novel Protein Genes	63
Associated Families	51

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea	42
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4
All Organisms → cellular organisms → Bacteria	4
Not Available	6
All Organisms → cellular organisms → Archaea → TACK group	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2

Ecosystem Assignment (GOLD)
Name	Rhizosphere And Bulk Soil Microbial Communities From The Great Lakes
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Loam → Unclassified → Rhizosphere And Bulk Soil → Rhizosphere And Bulk Soil Microbial Communities From The Great Lakes

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → rhizosphere → bulk soil
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere

Location Information
Location	Rose Lake, Michigan, USA
Coordinates	Lat. (^o)	44.0647	Long. (^o)	-85.3817	Alt. (m)	N/A	Depth (m)	32
Location on Map

Zoom:	Powered by OpenStreetMap^©

Family	Category	Number of Sequences	3D Structure?
F002896	Metagenome / Metatranscriptome	522	N
F005305	Metagenome / Metatranscriptome	405	N
F005683	Metagenome / Metatranscriptome	393	Y
F005797	Metagenome / Metatranscriptome	390	Y
F005800	Metagenome / Metatranscriptome	390	Y
F005950	Metagenome / Metatranscriptome	385	Y
F006898	Metagenome / Metatranscriptome	362	Y
F007651	Metagenome / Metatranscriptome	347	N
F009342	Metagenome / Metatranscriptome	319	Y
F009776	Metagenome / Metatranscriptome	313	Y
F010093	Metagenome	308	Y
F010126	Metagenome / Metatranscriptome	308	Y
F010272	Metagenome / Metatranscriptome	306	Y
F012359	Metagenome	281	Y
F013020	Metagenome / Metatranscriptome	275	N
F013894	Metagenome	267	N
F016993	Metagenome / Metatranscriptome	243	Y
F019548	Metagenome / Metatranscriptome	229	N
F021640	Metagenome	218	Y
F023903	Metagenome / Metatranscriptome	208	N
F026602	Metagenome / Metatranscriptome	197	N
F028663	Metagenome	191	N
F029808	Metagenome / Metatranscriptome	187	Y
F032670	Metagenome / Metatranscriptome	179	N
F032712	Metagenome / Metatranscriptome	179	N
F033179	Metagenome / Metatranscriptome	178	Y
F033996	Metagenome / Metatranscriptome	176	N
F042938	Metagenome	157	N
F046444	Metagenome	151	Y
F048144	Metagenome	148	N
F048407	Metagenome / Metatranscriptome	148	N
F053116	Metagenome	141	N
F056884	Metagenome	137	Y
F057493	Metagenome / Metatranscriptome	136	N
F059733	Metagenome	133	N
F068551	Metagenome	124	N
F068880	Metagenome / Metatranscriptome	124	Y
F069947	Metagenome	123	Y
F075048	Metagenome	119	N
F079760	Metagenome	115	N
F081731	Metagenome	114	N
F081935	Metagenome / Metatranscriptome	114	N
F081936	Metagenome / Metatranscriptome	114	N
F087961	Metagenome	110	Y
F088584	Metagenome / Metatranscriptome	109	Y
F088952	Metagenome	109	Y
F090599	Metagenome / Metatranscriptome	108	N
F092340	Metagenome / Metatranscriptome	107	N
F099530	Metagenome / Metatranscriptome	103	N
F100606	Metagenome	102	N
F105401	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
contig00309	All Organisms → cellular organisms → Archaea	782	Open in IMG/M
contig00345	All Organisms → cellular organisms → Archaea	630	Open in IMG/M
contig00488	All Organisms → cellular organisms → Archaea	2215	Open in IMG/M
contig00495	All Organisms → cellular organisms → Archaea	1602	Open in IMG/M
contig00681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
contig00844	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
contig01119	All Organisms → cellular organisms → Archaea	1039	Open in IMG/M
contig01374	All Organisms → cellular organisms → Archaea	5385	Open in IMG/M
contig01530	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	519	Open in IMG/M
contig02076	All Organisms → cellular organisms → Archaea	941	Open in IMG/M
contig02448	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
contig02487	All Organisms → cellular organisms → Archaea	555	Open in IMG/M
contig02674	All Organisms → cellular organisms → Archaea	3707	Open in IMG/M
contig02683	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	511	Open in IMG/M
contig02820	All Organisms → cellular organisms → Archaea	818	Open in IMG/M
contig03134	Not Available	669	Open in IMG/M
contig03161	All Organisms → cellular organisms → Archaea	1753	Open in IMG/M
contig03330	All Organisms → cellular organisms → Bacteria	5702	Open in IMG/M
contig03358	All Organisms → cellular organisms → Archaea	1446	Open in IMG/M
contig03527	Not Available	1130	Open in IMG/M
contig03607	All Organisms → cellular organisms → Archaea	793	Open in IMG/M
contig03612	All Organisms → cellular organisms → Archaea	876	Open in IMG/M
contig03623	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	541	Open in IMG/M
contig03638	All Organisms → cellular organisms → Archaea	2682	Open in IMG/M
contig03846	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
contig03944	All Organisms → cellular organisms → Archaea	1031	Open in IMG/M
contig04007	All Organisms → cellular organisms → Archaea	1030	Open in IMG/M
contig04061	All Organisms → cellular organisms → Archaea	2901	Open in IMG/M
contig04094	All Organisms → cellular organisms → Archaea	1929	Open in IMG/M
contig04098	Not Available	706	Open in IMG/M
contig04152	All Organisms → cellular organisms → Archaea → TACK group	1646	Open in IMG/M
contig04156	All Organisms → cellular organisms → Archaea	1594	Open in IMG/M
contig04163	All Organisms → cellular organisms → Archaea	1962	Open in IMG/M
contig04221	All Organisms → cellular organisms → Archaea	1543	Open in IMG/M
contig04257	All Organisms → cellular organisms → Archaea	2568	Open in IMG/M
contig04287	All Organisms → cellular organisms → Archaea	672	Open in IMG/M
contig04464	All Organisms → cellular organisms → Archaea	1905	Open in IMG/M
contig04597	All Organisms → cellular organisms → Archaea	1185	Open in IMG/M
contig04674	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1028	Open in IMG/M
contig04685	All Organisms → cellular organisms → Archaea	1298	Open in IMG/M
contig04700	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
contig04758	All Organisms → cellular organisms → Archaea	1517	Open in IMG/M
contig04831	All Organisms → cellular organisms → Archaea	974	Open in IMG/M
contig05025	All Organisms → cellular organisms → Archaea	519	Open in IMG/M
contig05051	All Organisms → cellular organisms → Archaea	2706	Open in IMG/M
contig05068	All Organisms → cellular organisms → Archaea	1404	Open in IMG/M
contig05074	All Organisms → cellular organisms → Archaea	805	Open in IMG/M
contig05606	Not Available	1039	Open in IMG/M
contig05788	All Organisms → cellular organisms → Archaea	681	Open in IMG/M
contig05942	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	542	Open in IMG/M
contig06438	All Organisms → cellular organisms → Archaea	797	Open in IMG/M
contig06715	All Organisms → cellular organisms → Archaea	2440	Open in IMG/M
contig06732	All Organisms → cellular organisms → Archaea	2498	Open in IMG/M
contig06737	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2192	Open in IMG/M
contig06744	All Organisms → cellular organisms → Archaea	2009	Open in IMG/M
contig06785	All Organisms → cellular organisms → Archaea	1719	Open in IMG/M
contig06809	All Organisms → cellular organisms → Archaea	1384	Open in IMG/M
contig06823	Not Available	987	Open in IMG/M
contig06828	All Organisms → cellular organisms → Archaea	1038	Open in IMG/M
contig06842	Not Available	644	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
contig00309	MSB1_00038570	F006898	MYLLLTTTTTISLLFSLFYLQGAYSAETFKGLSFSIEVPDTWAFTETPEPPIERVLGVSSYTSVVLVPVQFAELLIEEKGDIEIGNGSAAVVFAKASDYSVKNAPLDLYVKYRMNEDDSLNVISQKDTTIGKDKAVRIDGNENNNASNTRLLEYLFLHNDEPYVIRYIASMDDFERNLPAFELMVKSFNFGANATDSKQT
contig00345	MSB1_00044210	F005683	MEKSNGTMIMGILLVFGLGVYSIYFGQISFAEGVELKTVGKGAISCGNGEEVKGVRINFFVSYDGGTPFAEWNMDHKELGSAGGMITNVKTSSNSFVLKGFEAFDNICDVETPSDVKLSGNCGEGTVSLVSDNGNKGTFASNVKCG
contig00488	MSB1_00081760	F033996	MEFNLTAKDKHALKSLSGDLRDMFSMKRVEDRLEDPDPEYRKVFDATFFKTVEGNYLDEMLNWVEDFKKRLTEAESKQSKEELDLETKELLDAGWLIEQNKNDRNG
contig00495	MSB1_00083230	F010126	MAALLLIIIESHTAIAIDTPISKMSGTNYGFQLESNVTNRTSSDQIAYRNPQYGIFLLFPSNWTFSTSGLPEYTQIAGFYAPLQNLSDPIPARFTISVMSYQQNVSLKDFTNVTLSSLNQTNQIKILSSGPTTLAGRPGYQVVFSTLPNIGNPVSFEIMHSWTAVDNKIYVFQYSVESSKFDTYLPTVKQILGSLRINGKG
contig00681	MSB1_00113100	F069947	PGAFSASSGRAISELDFNGKKRTTMNPLTHFKRKSILCLLLLVSLSSPFGRTFAQTAPLDLWSSDTLLTIRDKNTLNYSITARPGYFEVSFDSNNNATWADGGPPYAIHTGGRIRIHGYLASPLSGGPYPAIVIGHGHHGHGSPEEAVLLAAFGYVALSIDGPGQGLSTGPPDTNQGWIS
contig00844	MSB1_00136600	F013020	MSPDNNSNDKREQLKLDALNKIFGWIEDKETKAVMINKYYNNKEHRAALKAFLDDMVKALDESTAETKS
contig01119	MSB1_00004410	F081731	MADKVKVGCKDLAFALITWDQLLPLVPEDDIAENEHQLNENGVEPDTYQDIIDRHINDLLNDIDKCDLNDAVEDMVEEIDPELP
contig01374	MSB1_00048270	F105401	MTVFNVSEKWSNGHNRSFRKHDPDDDRLEVRANGNTLCLIDGNGNCTVAGDKRRIYCHYNNYNAILTVVLIPHFKSMKDNCSLKMRSRHNEQGQSCEGGIPLDPNKFGGYGFAVNTKGWD
contig01530	MSB1_00088880	F005800	MYATNSNIVRLPNDIVEFESVDDDGLLWFSAHIPRHWVKAYELHFPAKLIFYRKGVDYYVEITGTAVVVNKQDVMHGANNIEGGKMLLKMVPYYIEYTDTGKRDAGFKKLKSQVYDVFMNTLGLSRAQQPRLTEIHQ
contig02076	MSB1_00112100	F005950	MTYAKQKVKVKIHRTSDYDDKYTGIRDFPDEKAMLGYGLSKVHKVIIKKYTKDDEFMATARKTRGVKFDYDMELYDHTGTDVKESKILRKESN
contig02448	MSB1_00070430	F088584	MNTNETMSQIEINKAIIQRYFEAYNNKNETIFDDIISPDYTDHGQSAYMGSP
contig02487	MSB1_00079810	F009776	MTKQKKLFNKTGDSVEIKEDGKDVTVTVQYTTKVEPTVSATEDNFNDLVSVYERTGFTEESV
contig02674	MSB1_00111160	F002896	MGKMNEDTILHFYRILENSLLESDISKIKEGDIDAWSQSFKKVVAESKERSGKGVFVPFLMWRLGEISPVEASKYLDRRRGDECRVSYDHNNVEYVVWVMALMFMSWSITNLKRKIQNGHCQNIEHPHGDTNPRYCQEGTKFHQELYNECVKTFRDLLIHSNSEKDD
contig02683	MSB1_00112490	F010093	QDSAMIDRGAFAKKMGAVWVRNFLVRKETYEQMRSSGSLRYIGNIDFLKRTMDYERITNFAQYRNQEFEKKYYTELFIPALYKAYDLTCQLNLDTSNHSDTFKMQKIASHHDILSGSDAVLFRNNMGAALTLRLERLKKKS
contig02820	MSB1_00130680	F032712	FDISSDFYLNYKILKLNMVNQKFTKVPIIITTVTLLLAVAVVVNPVNVVHAQDNATQAQDNATQKQGNLTALIDVDTLSKNIKERHPILAQMAADEDKGIIVVIKGMDPKEAAKTIIALNMLRLLQQYKEVDAK
contig03134	MSB1_00004680	F029808	KYICNHLILNDETERMKSKNVLVTVSVLLFSATVMVPMAYAVDVFHKDELPFGKPYEDWVHDYWRWNAGLPSDPETTVAGIKENGCFINNDGPVAFLMDPAIGGQHHQKCEISSNQGILIAGWSAECDASVKSSQNKSFKELSKCARDLNLGKVTVNAWVDNKPLAQVKAEDYKTINVVNATELYTKAFNITTPENSWLTVDYPGIYPGAVHGWFIFLKPLP
contig03161	MSB1_00009120	F032670	MKCGICKEEIIKEKRREHLKYHKLDDTLVEWIIETDNDLISSYEKH
contig03330	MSB1_00039710	F012359	MLDNAILRPNEITKSKHKEPKTSSILLITLAITMAIILLMYAGMWYSESIMKQYSACRDKIIAFEQRGFYDSPDQFRLALSFCDTK
contig03358	MSB1_00044160	F026602	MTGDTTVCLNNQIIAIGLIMISLTLASMHVLAGRLYAIEQPSKMEGINEEECNKIFKCKIISEDVLKYPDIVNPFAKNEEIAKTLGNNANDVKIMAEHSCQKLMDVDIVKKKDQKIGEQTPKYLVCLP
contig03527	MSB1_00085880	F048144	MALSARYPSSDNNELHEKLKWSFSCAIDKSEFLKQSKDIKTIEGWYSQAKKTTDNISNPSLVSSEMIKELLNHVYPHYTNIIIEKTDINIKSTDGGVQSDLDLGIVTMRPYIEFVKIVNGESMPPSKFTFQLDIRTYISIFKAVNNSASENIELKKLGIELEISLLHMPYFYLSEPMKLTTKTFEIENIRLPRKRRI
contig03607	MSB1_00099280	F010272	MFQLEMYKDHKSNLILFSIGALVSLSLLVFPSTNMIAYSQSGNQTQGNDQAQQKLFELTQKFNKILKDSNVNLTLPQDELSSKLQVLAKSAAFKSLSEKFSQAVQDLGQGNKTVVLKLQAGANLS
contig03612	MSB1_00100050	F068551	MQLGVIVIFIFVILGIVFFIVFGSGYFKTENPQTENLQNRSTVVFPNADSIPPECKYNPNDLLCQFLLEKQKMKLSQNE
contig03623	MSB1_00102040	F046444	LGLGIKQKDAEGADKIVIDYTKDMIGDIPVKTIELYYLKDTLAKIIVNISPEYYTKLIELCKSSFGEPTKDFSNNEKVKFDSTVSTNNYKDNYIWKASRLRLEYFYLYPKISSGSYGTRTLYLTYILNDYGQRLV
contig03638	MSB1_00104180	F032712	MLPADVINESNFHISSDFYLNYKILTLNMVNQKFTKGPIIIMTVTLLVAAAVLVNPVNMVHAQGNATQAPANATQKQGNLTAVIDVDTLSKNIKERHPVLAQMAGDEDKNTIVVIKGMDPKEAAKTIIALNMLRLLQQYKEVDAK
contig03846	MSB1_00133940	F033179	VTTTHAEIVQAARNLHDQIRHAGFRQAQDIFDKPTPFHPGNDVFYDHACPGDEVMEAPVCSAHLLACGGFFGCCVRPPAGS
contig03944	MSB1_00147180	F075048	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKINEELAFKTNTQDGQIEIIETFRL
contig04007	MSB1_00154770	F033996	MQFNFTAKDKHALKSLSGDLRDMFSMKRVEDRLENPEYRKVFDASFFRTVEGNYVDEMLNWVEDFRKRIDNQESKESKEQLYSETKELVDAGWIEN
contig04061	MSB1_00025080	F006898	MYLILIATTTILLLLFLIQSAHSVEKFRGLPFSIEVPDSWTYTETPEPPIEHLLGISSYSSVVLVPAKFAELLIQDKGDIGMGNGTAAIVFAEDSDYTVKNAPPDLYVKFRMNKDDSLNVTSRQDTMVGKEKAVRIEGSKNDTSGNIRLLEYLIFHNNEPYIIRYIASTNDFERYLPDFELMVKSFMFGTNATRSE
contig04094	MSB1_00095300	F005950	MKTTNAKNKVKVKIHRTSDYDDKYTGIRDFPDEKAMLQYGLSKVYKVTIRKYTQDDEFMATAQKTRGAKFDYDMELSD
contig04098	MSB1_00101920	F023903	MVELMINHEGKICDNCGDSVDQLVPLNDPTRIGRWWCLKCIYKEGKAKFDADSKNG
contig04152	MSB1_00003380	F033996	MELNLTAKDKHALKSLSVDLRDMLRMKKVDDRVESPEYRRVFDATFFNVMDGNYLDEMLNWIEDFRNRMADAESEQSNDELNLETKKLIDAGWITQPN
contig04156	MSB1_00003930	F057493	LRYSKRDKVYGCLNCGHQHSETKAEVGSILYCKDCDKYEQIVHISETGISTSERLEKDELFQLLSESRLKIVDINDIRN
contig04163	MSB1_00004990	F100606	EIIVIIMSNDLNELIARKDKLEGELNHELSADYNELMKKMSESFRDMHENAVQYYKQKANEQLDKMEKHTIR
contig04221	MSB1_00014860	F048407	MNQEEILKKTNDLGLTSTPEIINQISDMVSKIAVDTMLSAGEVEALTNIMILKACDTALLDKRTIITVNDVLSSLNFVCVPFFFPCAKSNLLENPRITASVITPSDVNLLESLGITKNDELNATPTTEIANKAVSYLKGKVPSMDISSHDFDLFSKRIEIWKLQANILSTLTK
contig04257	MSB1_00020620	F002896	MGKMNEDTILHFYRILENSLLESDISKINEEDIDAWSQSFKKVVKESREKSGKGVFVPFLMWKLGEISPVEASKYLVNRKQDECLVSYDHNNVEYILWVMALMFMSWSVTNLKRKTQNGHCQNIDHPHGDTNPRLCKEGTIFHQELYNECVKTFKDLLIHSDAQHH
contig04287	MSB1_00025460	F028663	MNKQTTPKQSIIFVIVIAIAFFITMQVLYGQGQVTNSTVGKSYSYRNELINRIMNSTCTEKRLVIGAEKPTSVLYLSTIEKIFKNCVAEGAIK
contig04425	MSB1_00047760	F042938	VEDLEKELGPIIENFQNLLKDAKAKKIDSLREVEDLKKEFNKLSNDVIEPVMRKFESYLKSKDVNSSVNVRSE
contig04464	MSB1_00059720	F105401	MVVFDISGTWSNGHNRIFRGFDPDDDKVEVRANGNIPCVIDGNGNCTITGDRRRIYCHYNNYNAILIVTLIPHFAGTNDNCSLKMRSRHNEPGMTCKGGSPLDGNRFGGYGFAVNENGWNSKRESTHNCHDQHRSGSVPMKIKMKEQ
contig04597	MSB1_00089030	F021640	LSPRFGFFKRKTPDDFDDKEKDANFANSVTNKELLEIVEKEKKAHEKELIDNLTDTRNQVLDCLDRLRRNADQLEVQEIKVESPQFESLINTSKKILISSIKKESLIESYQIKTYEDAIKFKNNLELLINRFGQVGDSHNRILNEFMRKQINKLKSEFDNLSSLLKKVAKIISAKENQINSCIRCKEDLIILDEKMNQRRSQQDRLTELIEETQSIDKNIVEGK
contig04674	MSB1_00102060	F007651	MPNDLNELIARKDKLEGELHHKLSADYNELMKKLSESFRDMHENSVQYYKQKANEELDKMEKNIQSGNKLSAINEKLLADTYLSFATTI
contig04685	MSB1_00103110	F019548	MDPSKKETYKILERFTSQKGGILFILHKSFSSDSKPPEEQTSVVRDDERKSAIFEINFGTVAGLSMLFECEKALADQVMSLDFLDSGIEGDVIWFGGMLDKSGSEFIGSTYEDGLKSAPVEQSELVHRVNQAIDKCLEYMLNSVELDKKVYVDASDRMSGYVKLTRIGEHILEKYPDLFIDNNTKSE
contig04700	MSB1_00105500	F005305	VEDLDKELGPLIENFQNLVKDAKVKKLHSLREDEDSKKEFSKLSQHVIEPVMRKFESYLESKDVNSSVHIQSQIVAGNNPSIEFSLHLKLTHESRYPNIKFSSSGEKISVQEDRLMTKGEVSQDMIPEYYDKELITEEFVKERLIRLIKSCFDKNWQSFYS
contig04758	MSB1_00113200	F056884	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERL
contig04831	MSB1_00124210	F081935	MRIERLPAPIPDEQRQVKIGSYMNDTSAFWYIRKETNSERKRTCIICGKTASYLVYFQLDGAKLKEKYCEQCLDSWVYLDVDESGIPNISK
contig05017	MSB1_00148720	F092340	VGENSQNVASQISNEIIKNPKGSVANAIKELATQISRGNVDELNIATKQIGSLIAKGNNIQQTLVQVTNNIVNNIETIKSTENNFDRVIIRQSTPTDQKTLITGTLDVIKNAKQEVDVPRVHIKFHGHERSLVLSFLTTNNYKYEMPFSKYNGAFTLDDNDFMVKLLSGDGNIQAASVAPMFTSGKIGERMFLDKEVNQGNVFFSMNGVDSGTYLLEVYVKLSNGSIGTFARGSVSVI
contig05025	MSB1_00149760	F059733	MFSQRDEIVPISGEVQYWITFVGENGYMIEFLSIPENFDTPDNTEMRDRFISSINFLRLSNSTDSGDRISSVAMSN
contig05051	MSB1_00153000	F081936	LPDRKLETTTANPPNVEASMNPKVEQLAHALEITLIVVPATADLLILNFKSLIICKLKFTKTATRIELIQVKKNTPSISLGT
contig05068	MSB1_00155440	F016993	KTLMNKSRTLGIIIASSIAMLGSTIVVSYDILHAEAAKSSLVFLWCYSTPNSPNGQLCYDNHGECSMVHSADGDAKSGCFKQKNGS
contig05074	MSB1_00156020	F009342	LSLSATYYITVPIATGYNVDFYSKGDSPFGISYGDWVAKYWNWDLSIPQDPKSNNLLGLNENGCLVHRENSMVMLVDTAAGGIWNQKCTISHNAGILIPIWTGECDQGTKAFETYSFKELSDCARGFDLGKVKGQVKVDGIPVATLDALDYKTNISNNVTEVYTKGFNATVPINSHFIVERYGTFPGAAHGWFVFLKPLQAGNHTVYYQNSVEPTTLSGAGNVNSAQFTYHFKVE
contig05606	MSB1_00084080	F053116	MVTITALYPFDRLQIVAAATLQENNNNTKPVFLSTISTAIATGAGATGAILTVPGYLRARKQPKFLAAYLLKIHNKHDELCRYPKLTDKSKNEYRQFLDSLRCDIIYSLKNGDINENQYRLIEDRIAEYLNGLNYPK
contig05788	MSB1_00112910	F088584	MNTNDIMSQIEMNKAIIQRYFDAYNNKNETIFDEIIS
contig05942	MSB1_00134780	F005797	MEKKPTTTVETNVYLAEWLIEDHINNMHHAEKHFSKNGEKLSDVLWENYESMSWCCEHSPVEGTIDIRFRTQHDNGLKQISVPVVTNFGVVCTKEKERNYKITWSYSLS
contig06020	MSB1_00145850	F088952	LLPKKFYARIIFLIVFIFISLTIFSQSPKTAKVSSQKPPAPKLVAPKILKDLRDSASYTAGIHIVNKYRSQNIYNFNGAVVAKACNDMQSSNQQLISNSDADNAVMTYQSQLMADPKKTVKPPVTGVVLNDIRDS
contig06438	MSB1_00034500	F013894	MRCLNWYDVPVGRAIFEEKGKITAQKEIGNNKTQMTFSSNGTFKGNIEVTNSGDLVSLSKGNKGTSAQGQGVVTTKDGSEKANYTFLQVGKTTTKDGKSVLRGVGSAVWSTDSTGKLAFLDNMLSFFIIEVDEMGNFSSKDRELSNNGTYYQSQIF
contig06715	MSB1_00092090	F032670	MKCGICKEEIIKEKRREHLKYHKLDDTLVEWIIETDDDLLSFYEKH
contig06732	MSB1_00094810	F079760	MYIEMIEKGNNQVEIMYLSTSSGKIRFRYDGREGNWYDFKGDARFKTDYFLEKGWKRKKSQTIINE
contig06737	MSB1_00095790	F090599	MNKKQSMKTFLVLGTIVAVAMIGITSSNVRLYAGGYGNDDDINWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD
contig06744	MSB1_00096730	F068880	VAQFLTDKGVLESTDQISFGHSNYGYRYILNLSSPSKLLNSFSGLPQIGSFLTTIPQGYDVPYKGMLILTQKQGDLYAIIFLSPIEHFDSVLRDIKASMDSIQFNSIE
contig06785	MSB1_00103550	F005305	VEDLEKELGPIIENFQNLLKDAKAKKIDSLREDEDLKKEFNKLSNDVIEPVMRKFESYLKSKDVNSSVNVRSEIVSGKNPSIEFILHFKLTHESRYPNIKFSSSGVKISIQEDRLITKGEVRQDMMPEYYDKEQITEEFIKERLIRLIKSCFDKNWQSIYS
contig06809	MSB1_00107150	F087961	LKLEETAKGVRISVHVYTNGKYTAINEAIATYLETKQMCEKEKIQIAPMEKSK
contig06823	MSB1_00109120	F099530	MNDNNEERREDRNRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVLAKK
contig06828	MSB1_00109970	F075048	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKINEELAFKTNTQDGQIEIIETFRLTISKKQQY
contig06842	MSB1_00111810	F023903	LTYHMVDLMINHEGKICDNCGDSVDQLVPLNDPTRIGRWWCLKCIYKEGKAKFDADAKNG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

2140918002: Rhizosphere and bulk soil microbial communities from the Great Lakes - Sample MSB1

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences