Metagenome Family F087961

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087961
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	59 residues
Representative Sequence	LISNSHSLKLEETAKGVRISVHVYTNDKETAINEAIATYLETKQKCEKEKIQIAPMEVIS
Number of Associated Samples	83
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	9.17 %
% of genes near scaffold ends (potentially truncated)	28.18 %
% of genes from short scaffolds (< 2000 bps)	74.55 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (97.273 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand (30.909 % of family members)
Environment Ontology (ENVO)	Unclassified (51.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (52.727 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.86% β-sheet: 19.32% Coil/Unstructured: 56.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00248	Aldo_ket_red	0.91
PF00072	Response_reg	0.91
PF07883	Cupin_2	0.91
PF00589	Phage_integrase	0.91
PF13473	Cupredoxin_1	0.91
PF00137	ATP-synt_C	0.91
PF13181	TPR_8	0.91
PF00107	ADH_zinc_N	0.91
PF00353	HemolysinCabind	0.91
PF00571	CBS	0.91
PF04008	Adenosine_kin	0.91
PF17170	DUF5128	0.91
PF01872	RibD_C	0.91
PF00892	EamA	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.91
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	0.91
COG1839	Adenosine/AMP kinase	Nucleotide transport and metabolism [F]	0.91
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	97.27 %
Unclassified	root	N/A	1.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	7.27 %
Unclassified	root	N/A	1.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	7.27 %
Unclassified	root	N/A	1.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	4.55 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	2.73 %
Unclassified	root	N/A	1.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	4.55 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	2.73 %
Unclassified	root	N/A	1.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	3.64 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2.73 %
Unclassified	root	N/A	1.82 %
unclassified Nitrososphaerales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales	0.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	3.64 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2.73 %
Unclassified	root	N/A	1.82 %
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	0.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918002\|contig06809	All Organisms → cellular organisms → Archaea	1384	Open in IMG/M
2162886013\|SwBSRL2_contig_10942076	All Organisms → cellular organisms → Archaea	2251	Open in IMG/M
2162886013\|SwBSRL2_contig_1870964	All Organisms → cellular organisms → Archaea	2250	Open in IMG/M
2228664021\|ICCgaii200_c0877656	All Organisms → cellular organisms → Archaea	1395	Open in IMG/M
3300000041\|ARcpr5oldR_c010751	All Organisms → cellular organisms → Archaea	780	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c001287	All Organisms → cellular organisms → Archaea	2374	Open in IMG/M
3300002090\|JGI24806J26614_1004394	All Organisms → cellular organisms → Archaea	3918	Open in IMG/M
3300002090\|JGI24806J26614_1016843	All Organisms → cellular organisms → Archaea	841	Open in IMG/M
3300002100\|JGI24809J26612_1002556	All Organisms → cellular organisms → Archaea	5876	Open in IMG/M
3300002899\|JGIcombinedJ43975_10004428	All Organisms → cellular organisms → Archaea	2270	Open in IMG/M
3300004114\|Ga0062593_102271796	All Organisms → cellular organisms → Archaea	609	Open in IMG/M
3300005105\|Ga0066812_1000472	All Organisms → cellular organisms → Archaea	1464	Open in IMG/M
3300005169\|Ga0066810_10005422	All Organisms → cellular organisms → Archaea	1675	Open in IMG/M
3300005186\|Ga0066676_10067779	All Organisms → cellular organisms → Archaea	2083	Open in IMG/M
3300005186\|Ga0066676_10521461	All Organisms → cellular organisms → Archaea	806	Open in IMG/M
3300005186\|Ga0066676_10812616	All Organisms → cellular organisms → Archaea	632	Open in IMG/M
3300005186\|Ga0066676_10957296	All Organisms → cellular organisms → Archaea	571	Open in IMG/M
3300005186\|Ga0066676_11111748	All Organisms → cellular organisms → Archaea	520	Open in IMG/M
3300005269\|Ga0065706_1000888	All Organisms → cellular organisms → Archaea	1855	Open in IMG/M
3300005289\|Ga0065704_10030011	All Organisms → cellular organisms → Archaea	805	Open in IMG/M
3300005289\|Ga0065704_10044474	All Organisms → cellular organisms → Archaea	915	Open in IMG/M
3300005294\|Ga0065705_10080431	All Organisms → cellular organisms → Archaea	620	Open in IMG/M
3300005295\|Ga0065707_10022773	All Organisms → cellular organisms → Archaea	1120	Open in IMG/M
3300005295\|Ga0065707_10068372	All Organisms → cellular organisms → Archaea	526	Open in IMG/M
3300005558\|Ga0066698_10790703	All Organisms → cellular organisms → Archaea	616	Open in IMG/M
3300005558\|Ga0066698_11035895	All Organisms → cellular organisms → Archaea	520	Open in IMG/M
3300006049\|Ga0075417_10017260	All Organisms → cellular organisms → Archaea	2821	Open in IMG/M
3300009147\|Ga0114129_10562391	All Organisms → cellular organisms → Archaea	1482	Open in IMG/M
3300009162\|Ga0075423_11448899	All Organisms → cellular organisms → Archaea	736	Open in IMG/M
3300009793\|Ga0105077_101233	All Organisms → cellular organisms → Archaea	1618	Open in IMG/M
3300009793\|Ga0105077_112473	All Organisms → cellular organisms → Archaea	664	Open in IMG/M
3300009797\|Ga0105080_1001487	All Organisms → cellular organisms → Archaea	1667	Open in IMG/M
3300009797\|Ga0105080_1007175	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	959	Open in IMG/M
3300009799\|Ga0105075_1020282	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	692	Open in IMG/M
3300009799\|Ga0105075_1046749	All Organisms → cellular organisms → Archaea	548	Open in IMG/M
3300009800\|Ga0105069_1013275	All Organisms → cellular organisms → Archaea	742	Open in IMG/M
3300009801\|Ga0105056_1025385	All Organisms → cellular organisms → Archaea	749	Open in IMG/M
3300009805\|Ga0105079_1001025	All Organisms → cellular organisms → Archaea	1469	Open in IMG/M
3300009807\|Ga0105061_1005663	All Organisms → cellular organisms → Archaea	1495	Open in IMG/M
3300009807\|Ga0105061_1015864	All Organisms → cellular organisms → Archaea	976	Open in IMG/M
3300009810\|Ga0105088_1026621	All Organisms → cellular organisms → Archaea	922	Open in IMG/M
3300009815\|Ga0105070_1066254	All Organisms → cellular organisms → Archaea	683	Open in IMG/M
3300009816\|Ga0105076_1007697	All Organisms → cellular organisms → Archaea	1787	Open in IMG/M
3300009820\|Ga0105085_1032198	All Organisms → cellular organisms → Archaea	927	Open in IMG/M
3300009821\|Ga0105064_1002888	All Organisms → cellular organisms → Archaea	2668	Open in IMG/M
3300009821\|Ga0105064_1046073	Not Available	836	Open in IMG/M
3300009822\|Ga0105066_1084756	All Organisms → cellular organisms → Archaea	689	Open in IMG/M
3300009823\|Ga0105078_1049011	All Organisms → cellular organisms → Archaea	557	Open in IMG/M
3300009836\|Ga0105068_1049178	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	761	Open in IMG/M
3300009837\|Ga0105058_1015152	All Organisms → cellular organisms → Archaea	1571	Open in IMG/M
3300009840\|Ga0126313_10874652	All Organisms → cellular organisms → Archaea	733	Open in IMG/M
3300010029\|Ga0105074_1001102	All Organisms → cellular organisms → Archaea	3532	Open in IMG/M
3300010029\|Ga0105074_1076331	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	614	Open in IMG/M
3300010301\|Ga0134070_10126131	All Organisms → cellular organisms → Archaea	906	Open in IMG/M
3300010304\|Ga0134088_10025810	All Organisms → cellular organisms → Archaea	2631	Open in IMG/M
3300010323\|Ga0134086_10248164	All Organisms → cellular organisms → Archaea	677	Open in IMG/M
3300010329\|Ga0134111_10018082	All Organisms → cellular organisms → Archaea	2343	Open in IMG/M
3300012201\|Ga0137365_10466590	All Organisms → cellular organisms → Archaea	929	Open in IMG/M
3300012511\|Ga0157332_1048428	All Organisms → cellular organisms → Archaea	603	Open in IMG/M
3300012972\|Ga0134077_10058221	All Organisms → cellular organisms → Archaea	1437	Open in IMG/M
3300014154\|Ga0134075_10032841	All Organisms → cellular organisms → Archaea	2113	Open in IMG/M
3300015358\|Ga0134089_10248691	All Organisms → cellular organisms → Archaea	726	Open in IMG/M
3300018000\|Ga0184604_10031540	All Organisms → cellular organisms → Archaea	1350	Open in IMG/M
3300018000\|Ga0184604_10115900	All Organisms → cellular organisms → Archaea	849	Open in IMG/M
3300018028\|Ga0184608_10012331	All Organisms → cellular organisms → Archaea	2940	Open in IMG/M
3300018031\|Ga0184634_10033422	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2049	Open in IMG/M
3300018031\|Ga0184634_10075349	All Organisms → cellular organisms → Archaea	1441	Open in IMG/M
3300018051\|Ga0184620_10015287	All Organisms → cellular organisms → Archaea	1822	Open in IMG/M
3300018052\|Ga0184638_1030912	All Organisms → cellular organisms → Archaea	1930	Open in IMG/M
3300018052\|Ga0184638_1162179	All Organisms → cellular organisms → Archaea	802	Open in IMG/M
3300018052\|Ga0184638_1194635	All Organisms → cellular organisms → Archaea	715	Open in IMG/M
3300018053\|Ga0184626_10077181	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1406	Open in IMG/M
3300018054\|Ga0184621_10033615	All Organisms → cellular organisms → Archaea	1651	Open in IMG/M
3300018054\|Ga0184621_10035192	All Organisms → cellular organisms → Archaea	1620	Open in IMG/M
3300018056\|Ga0184623_10000175	All Organisms → cellular organisms → Archaea	26165	Open in IMG/M
3300018061\|Ga0184619_10000987	All Organisms → cellular organisms → Archaea	9859	Open in IMG/M
3300018072\|Ga0184635_10017472	All Organisms → cellular organisms → Archaea	2592	Open in IMG/M
3300018072\|Ga0184635_10284083	All Organisms → cellular organisms → Archaea	652	Open in IMG/M
3300018074\|Ga0184640_10093731	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1299	Open in IMG/M
3300018076\|Ga0184609_10001905	All Organisms → cellular organisms → Archaea	6746	Open in IMG/M
3300018082\|Ga0184639_10076873	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300018465\|Ga0190269_10196444	All Organisms → cellular organisms → Archaea	1089	Open in IMG/M
3300019871\|Ga0193702_1025930	All Organisms → cellular organisms → Archaea	753	Open in IMG/M
3300022534\|Ga0224452_1001014	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	6342	Open in IMG/M
3300022534\|Ga0224452_1115976	All Organisms → cellular organisms → Archaea	822	Open in IMG/M
3300022756\|Ga0222622_10100652	All Organisms → cellular organisms → Archaea	1776	Open in IMG/M
3300026324\|Ga0209470_1024092	All Organisms → cellular organisms → Archaea	3229	Open in IMG/M
3300026324\|Ga0209470_1346491	All Organisms → cellular organisms → Archaea	534	Open in IMG/M
3300026878\|Ga0208891_1003882	All Organisms → cellular organisms → Archaea	594	Open in IMG/M
3300026912\|Ga0208520_1000454	All Organisms → cellular organisms → Archaea	1207	Open in IMG/M
3300027006\|Ga0209896_1013596	All Organisms → cellular organisms → Archaea	891	Open in IMG/M
3300027006\|Ga0209896_1016649	All Organisms → cellular organisms → Archaea	817	Open in IMG/M
3300027013\|Ga0209884_1000027	All Organisms → cellular organisms → Archaea	20034	Open in IMG/M
3300027013\|Ga0209884_1002828	All Organisms → cellular organisms → Archaea	1470	Open in IMG/M
3300027018\|Ga0208475_1000353	All Organisms → cellular organisms → Archaea	3507	Open in IMG/M
3300027027\|Ga0209844_1000432	All Organisms → cellular organisms → Archaea	2378	Open in IMG/M
3300027056\|Ga0209879_1043593	All Organisms → cellular organisms → Archaea	734	Open in IMG/M
3300027209\|Ga0209875_1004731	All Organisms → cellular organisms → Archaea	1658	Open in IMG/M
3300027277\|Ga0209846_1028893	All Organisms → cellular organisms → Archaea	889	Open in IMG/M
3300027472\|Ga0207449_100070	All Organisms → cellular organisms → Archaea	1334	Open in IMG/M
3300027490\|Ga0209899_1061906	All Organisms → cellular organisms → Archaea	759	Open in IMG/M
3300027873\|Ga0209814_10001456	All Organisms → cellular organisms → Archaea	8369	Open in IMG/M
3300027961\|Ga0209853_1098088	All Organisms → cellular organisms → Archaea	746	Open in IMG/M
3300027961\|Ga0209853_1161703	All Organisms → cellular organisms → Archaea	536	Open in IMG/M
3300028722\|Ga0307319_10012485	All Organisms → cellular organisms → Archaea	2592	Open in IMG/M
3300028784\|Ga0307282_10030694	All Organisms → cellular organisms → Archaea	2321	Open in IMG/M
3300028811\|Ga0307292_10196767	All Organisms → cellular organisms → Archaea	827	Open in IMG/M
3300031720\|Ga0307469_10807635	All Organisms → cellular organisms → Archaea	861	Open in IMG/M
3300031740\|Ga0307468_101171538	All Organisms → cellular organisms → Archaea	690	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.73%
Host-Associated	Host-Associated	7.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.82%
Aquatic	Environmental → Aquatic	20.91%
Plants	Host-Associated → Plants	7.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.82%
Sediment	Environmental → Aquatic → Sediment	20.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.09%
Sand	Environmental → Terrestrial → Soil → Sand	30.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	20.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Loam	Environmental → Terrestrial → Soil → Loam	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	30.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	20.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	30.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	18.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	5.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Rhizosphere And Bulk Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Rhizosphere And Bulk Soil	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918002	Rhizosphere and bulk soil microbial communities from the Great Lakes - Sample MSB1	Environmental	Open in IMG/M
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300002090	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um MDA	Environmental	Open in IMG/M
3300002100	Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDA	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005269	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 Bulk Soil	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009793	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40	Environmental	Open in IMG/M
3300009797	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_10_20	Environmental	Open in IMG/M
3300009799	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30	Environmental	Open in IMG/M
3300009800	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009805	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_0_10	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019871	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026878	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC (SPAdes)	Environmental	Open in IMG/M
3300026912	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027013	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027027	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027472	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-HINK07-D (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MSB1_00107150	2140918002	Rhizosphere And Bulk Soil	LKLEETAKGVRISVHVYTNGKYTAINEAIATYLETKQMCEKEKIQIAPMEKSK
SwBSRL2_0899.00004010	2162886013	Switchgrass Rhizosphere	LKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEKSK
SwBSRL2_0304.00002270	2162886013	Switchgrass Rhizosphere	LKLEETAKGVRISVHVYTNDKHTAINEAIATYLETKQICEKEKIQIAPMEKSK
ICCgaii200_08776564	2228664021	Soil	PVPVVYTHSVKIEDTAKGIRLSAHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEISK
ARcpr5oldR_0107512	3300000041	Arabidopsis Rhizosphere	LFSNSLSLKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQMAPMEKSK
ARSoilOldRDRAFT_0012873	3300000044	Arabidopsis Rhizosphere	LKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQMAPMEKSK*
JGI24806J26614_10043941	3300002090	Soil	RYNYACFTFLISNSHSLKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEISK*
JGI24806J26614_10168432	3300002090	Soil	LKLEETAKGIRISVHVYTNDKQTAINEAIETYLETKQMCEKEKIQIAPMEISK*
JGI24809J26612_10025564	3300002100	Soil	LISNSHSLKLEETAKGVRISVHVYTNDKQTAINEAIATYLEPKQMCEKEKIQIAPMEISK
JGIcombinedJ43975_100044283	3300002899	Soil	LISNSHSLKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEISK
Ga0062593_1022717961	3300004114	Soil	AKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEISK*
Ga0066812_10004721	3300005105	Soil	LKLEETAKGVRISVHVYTNEKQTAINEAIATYLETKQMCEKEKIQIAPMEKSK*
Ga0066810_100054222	3300005169	Soil	LISNSHSLKLEETAKGVRISVHVYTNEKQTAINEAIATYLETKQMCEKEKIQIAPMEKSK
Ga0066676_100677794	3300005186	Soil	LKLEETAKGVRISVHAYTNSRETAINEAIANLETKQKCEREKIQIAPMEISK*
Ga0066676_105214611	3300005186	Soil	LISNSHSLKLEETAKGVRISVHVYTNDKETAIHEVIATYLETKQKCEKEKIQEASIEMTSK*
Ga0066676_108126161	3300005186	Soil	LKLEETAKGVRISVHVYTNDRNTAINEPIATYLETKQKCEKEKIQIAAMEVISK*
Ga0066676_109572962	3300005186	Soil	LISNSHSLKLEETAKGVRISVHVYTNGRYTAIDKAIATYLETKQKCEKEKIQIAPMEVISK*
Ga0066676_111117481	3300005186	Soil	LISNSHSLKLEETAKGVRISVRVYTNDRNTAINEPIATYLETKQKCEKEKILVSPMEISK
Ga0065706_10008883	3300005269	Switchgrass Rhizosphere	LKLEETAKGVRISVHVYTNDKQXAIXEAIATYLETKQMCEKEKIQIAPMEKSK*
Ga0065704_100300112	3300005289	Switchgrass Rhizosphere	LISNSHSLKLEETAKGVRISVHVYTNDKQXAIXEAIATYLETKQXCEKEKIQIAPMEKSK
Ga0065704_100444742	3300005289	Switchgrass Rhizosphere	LKLEETAKGVRISVHVYTNGKYTAINEAIATYLETKQMCEKEKIQIAPMEKSK*
Ga0065705_100804311	3300005294	Switchgrass Rhizosphere	LISNSHSLNLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEKSK
Ga0065707_100227732	3300005295	Switchgrass Rhizosphere	LISNSHSLKLEXTAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEISK
Ga0065707_100683722	3300005295	Switchgrass Rhizosphere	CFTFLISNSHSLKLEETAKGVRISVHVYTNDKQIAINEAIATYLETKQICEKEKIQIAPMEKSK*
Ga0066698_107907033	3300005558	Soil	ACFTFLISNSHSLKLEETAKGVRISVHVYTNDKETAIHEVIATYLETKQKCEKEKIQEASIEMTSK*
Ga0066698_110358952	3300005558	Soil	LKLEETAKGVRISVRVYTNDRNTAINEPIATYLETKQKCEKEKILVSPMEISK*
Ga0075417_100172606	3300006049	Populus Rhizosphere	LKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEISK*
Ga0114129_105623913	3300009147	Populus Rhizosphere	LEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEISK*
Ga0075423_114488992	3300009162	Populus Rhizosphere	FLISNSYSLKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEISK*
Ga0105077_1012333	3300009793	Groundwater Sand	LISNSHSIKISETAKGVRIDVHIYATDKQTAINEAIATYLETRLKAEKEKIQVAPMDVISK*
Ga0105077_1124732	3300009793	Groundwater Sand	LKLEETAKGVRISVHVYTNDKETAIHEAIATYLETKQKCEKEKIQIAPMEVISKYNEMY*
Ga0105080_10014871	3300009797	Groundwater Sand	LKLEETAKGGRISVHVYTNDKETAIHEAIATYLETKQRCENEKIQIAPMEVI
Ga0105080_10071752	3300009797	Groundwater Sand	LKLEETAKGVRISVHVYTNGRDTAINEAIATYLETKQRCEKEKIQIALMEISK*
Ga0105075_10202822	3300009799	Groundwater Sand	LKLEETAKGVRISVHVYTNGRDTAINEAIATYLETKQRCEKEKIQIAPMEMASR*
Ga0105075_10467491	3300009799	Groundwater Sand	NTIRYNYACFTFLISNSHSLKLEETAKGVRISVHVYTNGRYTAINEAIATFLETKQLADKEKILVAPMEISCK*
Ga0105069_10132752	3300009800	Groundwater Sand	NYNTIRYNYACFTFLISNSHSLKLEETAKGVRISVHVYTNDKETAINEAIATYLETKQKCEKEKIQIAPMEVISK*
Ga0105056_10253851	3300009801	Groundwater Sand	LISNSHSLKLEETAKGVRISVHVYTNDKETAIHEAIVTYLETKQKCEKEKIQIAPMEVISK*
Ga0105079_10010251	3300009805	Groundwater Sand	LKLEETAKGVRISVHVYTNDKETAIHEAIATYLETKQKCEKEKIQIAPMEVISK
Ga0105061_10056631	3300009807	Groundwater Sand	LKLEETAKGGRISVHVYTNDKETAIHEAIVTYLETKQKCEKEKIQIAPIEMASK*
Ga0105061_10158641	3300009807	Groundwater Sand	FLISNSHSIKISETAKGVRIDVHIYATDKQTAINEAIATYLETRLKAEKEKIQVASMDVISK*
Ga0105088_10266211	3300009810	Groundwater Sand	ACFTFLISNSHSLKLEETAKGGRISVHVYTNDKETAIHEAIATYLETKQKCEKEKIQIAPMEVISKYNEMY*
Ga0105070_10662541	3300009815	Groundwater Sand	LKLEETAKGIRLSVHVYTTDRETAINEAIATYLETKQKCEREKIQVAPMEISE*
Ga0105076_10076973	3300009816	Groundwater Sand	LKLEETAKGGRISVHVYTNDKETAIHEAIATYLETKQKCEKEKI
Ga0105085_10321981	3300009820	Groundwater Sand	LISNSHSLKLEETAKGGRISVHVYTNDKETAIHEAIATYLETKQKCEKEKIQIAPMEVISKYNEMY*
Ga0105064_10028886	3300009821	Groundwater Sand	LISNSHSIKISETAKGVRIDVHIYATDKQTAINEAIATYLETRLKAEKEKIQVA
Ga0105064_10460731	3300009821	Groundwater Sand	LKLEETAKGGRISVHVYTNDKETAIHEAIATYLETKQKCEKEKIQIAPMEVISKYNEMY*
Ga0105066_10847561	3300009822	Groundwater Sand	SHSLKLEETAKGIRLSVHVYTTDRETAINEAIATYLETKQKCEREKIQVAPMEISE*
Ga0105078_10490111	3300009823	Groundwater Sand	LKLEETAKGVRISVHVYTNDKETAIHEAIVTYLETKQKCEKEKIQIAPMEVISK*
Ga0105068_10491782	3300009836	Groundwater Sand	LKLEETAKGVRISVHVYTNGRDTAINEAIATYLETKQRCEKEKIQIAPMEISK*
Ga0105058_10151521	3300009837	Groundwater Sand	LISNSQSIKISETAKGVRIDVHIYATDKQTAINEAIATYLETRLKAEKEKIQVAPMDVISK*
Ga0126313_108746521	3300009840	Serpentine Soil	LISNSHIKISETAKGSRIDVHIYATDKQTAINEAIATYLETKQRCEKEKIQVVPIEVISK
Ga0105074_10011021	3300010029	Groundwater Sand	LISNSHSIKISETAKGVRIDVYIYATDKQTAINEAIATYLETRLKAEKEKIQVAPMDVISK*
Ga0105074_10763312	3300010029	Groundwater Sand	LKLEETAKGVRISVHVYTNGRDTAINEAIATYLETKQRCEKEKIQIAPM
Ga0134070_101261312	3300010301	Grasslands Soil	LKLEETAKGVRISVHVYTNGRYTAIDKAIATYLETKQKCEKEKIQIAPMEVISK*
Ga0134088_100258104	3300010304	Grasslands Soil	LKSEETAKGVRISVHVYTNDRNTAINEAIATYLETKQKCEKEKIQIAPMEVISK*
Ga0134086_102481641	3300010323	Grasslands Soil	NYNTIRYNYACFTFLISNSHSLKLEETAKGVRISVHVYTNDRNTAINEAIATYLETKQKCEKEKIQIAPMEVISK*
Ga0134111_100180823	3300010329	Grasslands Soil	LKLEETAKGVRISVHVYTNDRNTAINEAIATYLETKQKCEKEKIQIAPMEVISK*
Ga0137365_104665903	3300012201	Vadose Zone Soil	MSQVEIPQLQTYTHSLKLEETAKGIRLSVHCYATDRQTAINEAITTYLETKEKCEKEKILVAPMELK*
Ga0157332_10484281	3300012511	Soil	LKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQMAPM
Ga0134077_100582213	3300012972	Grasslands Soil	LKLEETAKGVRISVHVYTNDKETAIHEVIATYLETKQKCEKEKIQEASIEMTSK*
Ga0134075_100328411	3300014154	Grasslands Soil	LKLEETAKGVRISVRVYTNDRNTAINEPIATYLETKQKCEKEKIQIAPMEVISK*
Ga0134089_102486913	3300015358	Grasslands Soil	LKLEETAKGVRISVHVYTNGKYTAINEAIATYLETKQMCEKEKIQIAPMEISK*
Ga0184604_100315402	3300018000	Groundwater Sediment	MTQQEEIPVQYTHSVKIEDTAKGIRLSVHCYATDRNTAIDEAIGTYLETKQKCETEKIQIAPMEISK
Ga0184604_101159002	3300018000	Groundwater Sediment	NTHSVKIEDTAKGIRLSVHVCTNDRNTAINESIGTYLETKQKCETEKIQIAPMEICKX
Ga0184608_100123316	3300018028	Groundwater Sediment	LISNSHSLKLEETAKGVRISVHVYTNDKETAINEAIATYLETKQKCEKEKIQIAPMEVIS
Ga0184634_100334225	3300018031	Groundwater Sediment	TFLISNSHSLKLEETAKGVRISVHVYTNDKETAIHEAIATYLETKQMCEKEKIQIAPMEKSK
Ga0184634_100753491	3300018031	Groundwater Sediment	IPQSYTHSIKIEDTAKGIRLSVNFYTNDRNTAINEAIAKYLETKQKCEREKFQIAPMEVLSK
Ga0184620_100152875	3300018051	Groundwater Sediment	YACFTFLISNSHSLKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEKSK
Ga0184638_10072503	3300018052	Groundwater Sediment	MSSEIPVQYTHSIKLEDTAKGVRISVHVYSNDRETAIADAILTYRDTKSSCEEKKILVAPWETSK
Ga0184638_10309122	3300018052	Groundwater Sediment	MINQEEITIPFLKLEETAKDIRISVHVYTNDRETAINEAITTYLETKLKAEKEKIPIAPMKISK
Ga0184638_11621793	3300018052	Groundwater Sediment	MINEEITIPQSYTHSIKIEDTAKGIRLSVNFYTNDRNTAINEAIAKYLETKQKCEREKIQIAPMEVLSK
Ga0184638_11946353	3300018052	Groundwater Sediment	MINEEITIPQSFTHSIKIEDTAKGIRLSVNFYTNDRNTAINEAIATYLETKQKCEREKFQIAPMEVLSK
Ga0184626_100771813	3300018053	Groundwater Sediment	MTSEEIPAQYTHSIKVEDTAKGIRISVHCYANDRQTAINETIATYLETKQKCEKEKILVAPMEISK
Ga0184621_100336153	3300018054	Groundwater Sediment	LISNSHSLKLEETAKGVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEKSK
Ga0184621_100351923	3300018054	Groundwater Sediment	CFTFLISNSHSLKLEETAKGVRISVHVYTNDKETANNEAIATYLETKQKCEKEKIQIAPMEVISK
Ga0184623_1000017512	3300018056	Groundwater Sediment	LKLEETAKGIRLSIHCYAADKQTAINEAIATYLETKQKCEKEKIQIAPMEVISK
Ga0184619_1000098716	3300018061	Groundwater Sediment	LISNSHSLKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEKSK
Ga0184635_100174724	3300018072	Groundwater Sediment	MINEEITIPQSFTHSIKIEDTAKGIRLSVNFYTNDRNTAINEAIAKYLETKQKCEREKIQIAPMEVLSK
Ga0184635_102840832	3300018072	Groundwater Sediment	MTTEIPEQAVLYTHSIKIEDTAKGIRISVHVYSNDQQTAIDQTIETYLNTRIKAESVKIPIAPMEISSK
Ga0184640_100937312	3300018074	Groundwater Sediment	MINEEITIPQSYTHSIKIEDTAKGIRLSVHVYTNDRNTAINEAIATYLETKQKCEREKIQIAPMEVLSK
Ga0184609_100019051	3300018076	Groundwater Sediment	LISNSHSLKLEETAKGVRISVHVYTNDKETAIHEAIATYLETKQKCEKEKIQIAPMEVIS
Ga0184639_100768731	3300018082	Groundwater Sediment	LKLEETAKGVRISVHVYTNDRNTAINEAIATYLETKQKCEKEKIQIAPMEVISK
Ga0190269_101964443	3300018465	Soil	LKLEETAKGVRISVHAYTNSRETAINEAIATYLETKQMCEKEKIQIAPMEKSK
Ga0193702_10259303	3300019871	Soil	LISNSHSLKLEETAKGVRISVHVYTNDKETAINEAIATYLETKQMCEKEKIQIAPMEKSK
Ga0224452_100101411	3300022534	Groundwater Sediment	LKLEETAKGVRISVHVYTNDKETAINEAIATYLETKQKCEKEKIQIAPMEVISK
Ga0224452_11159761	3300022534	Groundwater Sediment	MINEEITIPQSYTHSIKIEDTAKGIRLSVNFYTNDRNTAINEAIATYLETKQKCEREKFQIAPMEVLSK
Ga0222622_101006521	3300022756	Groundwater Sediment	SHSLKLEETAKGVRISVHVYTNDKETAINEAIATYLETKQKCEKEKIQIAPMEVISK
Ga0209470_10240926	3300026324	Soil	LKLEETAKGVRISVHVYTNGRYTAIDKAIATYLETKQKCEKEKIQIAPMEVISK
Ga0209470_13464912	3300026324	Soil	LKLEETAKGVRISVRVYTNDRNTAINEPIATYLETKQKCEKEKILVSPMEISK
Ga0208891_10038822	3300026878	Soil	LFSNSHSLKLEETAKGVRISVHVYTNEKQTAINEAIATYLETKQMCEKEKIQIAPMEKSK
Ga0208520_10004542	3300026912	Soil	LKLEETAKGVRISVHVYTNEKQTAINEAIATYLETKQMCEKEKIQIAPMEKSK
Ga0209896_10135962	3300027006	Groundwater Sand	LKLEETAKGVRISVHVYTNDKETAIHEAIVTYLETKQKCEKEKIQIAPMEVISK
Ga0209896_10166492	3300027006	Groundwater Sand	LISNSHSIKISETAKGVRIDVHIYATDKQTAINEGIATYLETRLKAEKEKIQVAPMDVIS
Ga0209884_100002721	3300027013	Groundwater Sand	LKLEETAKGVRISVHVYTNDKETAIHEAIATYLETKQKCEKEKIQIAPMEVISKYNEMY
Ga0209884_10028281	3300027013	Groundwater Sand	LISNSHSIKISETAKGVRIDVHIYATDKQTAINEAIATYLETRLKAEKEKIQVAPMDVIS
Ga0208475_10003535	3300027018	Soil	LISDSHSLKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEISK
Ga0209844_10004323	3300027027	Groundwater Sand	LISNSHSLKLEETAKGVRISVHVYTNDKETAIHEAIATYLETKQKCEKEKIQIAPMEVISKYNEMY
Ga0209879_10435932	3300027056	Groundwater Sand	YNYNTIRYNYACFTFLISNLHSLKLEETAKGVRISVHVYTNDKETAIHEAIVTYLETKQKCEKEKIQIAPMEVISK
Ga0209875_10047312	3300027209	Groundwater Sand	LISNSHSIKISETAKGVRIDVHIYATDKQTAINEAIATYLETRLKAEKEKIQVASMDVIS
Ga0209846_10288932	3300027277	Groundwater Sand	LISNSHSLKLEETAKGGRISVHVYTNDKETAIHEAIATYLETKQKCEKEKIQIAPMEVISKYNEMY
Ga0207449_1000702	3300027472	Soil	LISNSHSLKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQICEKEKIQIAPMEKSK
Ga0209899_10619062	3300027490	Groundwater Sand	LKLEETAKGIRLSVHVYTTDRETAINEAIATYLETKQKCEREKIQVAPMEISE
Ga0209814_100014569	3300027873	Populus Rhizosphere	LKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEISK
Ga0209853_10980882	3300027961	Groundwater Sand	IRYNYACFTFLISNSHSIKISETAKGVRIDVHIYATDKQTAINEAIATYLETRLKAEKEKIQVAPMDVISK
Ga0209853_11617032	3300027961	Groundwater Sand	FLISNSHSLKLEETAKGIRLSVHVYTTDRETAINEAIATYLETKQKCEREKIQVAPMEIS
Ga0307319_100124853	3300028722	Soil	LKLEETAKGVRISVHVYTNDKQTAINEAIATYLETKQKCETEKIQIAPMEISK
Ga0307282_100306942	3300028784	Soil	LKLEETAKGVYKQTAINEAIATYLETKQMCEKEKIQIAPMEKSK
Ga0307292_101967671	3300028811	Soil	ISNSHSLKLEETAKGVYTNDKQTAINEAIATYLETKQMCEKEKIQIAPMEKSK
Ga0307469_108076352	3300031720	Hardwood Forest Soil	LKLEETAKGVRISVHVYTNDKQIAINEAIATYLETKQICEKEKIQIAPMEKSK
Ga0307468_1011715382	3300031740	Hardwood Forest Soil	LISNSHSLKLEETAKGVRISVHVYTNDKQIAINEAIATYLETKQICEKEKIQIAPMEKSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087961

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences