| Basic Information | |
|---|---|
| Taxon OID | 3300011910 Open in IMG/M |
| Scaffold ID | Ga0119893_115060 Open in IMG/M |
| Source Dataset Name | Wastewater microbial communities from municipal sewage treatment plant in Nanjing, China - JXZ_IW_meta |
| Source Dataset Category | Metagenome |
| Source Dataset Use Policy | Open |
| Sequencing Center | Nanjing University |
| Sequencing Status | Permanent Draft |
| Scaffold Components | |
|---|---|
| Scaffold Length (bps) | 640 |
| Total Scaffold Genes | 1 (view) |
| Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
| Novel Protein Genes | 1 (view) |
| Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
| Associated Families | 1 |
| Taxonomy | |
|---|---|
| All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana | (Source: UniRef50) |
| Source Dataset Ecosystem |
|---|
| Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Municipal Sewage Treatment Plants In Nanjing, China |
| Source Dataset Sampling Location | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location Name | China: Nanjing | |||||||
| Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | Location on Map | |||
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F000331 | Metagenome / Metatranscriptome | 1285 | Y |
| Protein ID | Family | RBS | Sequence |
|---|---|---|---|
| Ga0119893_1150601 | F000331 | N/A | PTTVRNPQANAILERVHQVIGQMLRTAELDMAKSVVPDDVDVFIDNAAWAICSTYHTVLKASPGAAIFGRDMLFDIPFLADWNKIGDYRQSCSVKRENSKRIDYDYKVGDKVLIVKEGILCKAESRYGKEPWTITTVHTNGTIRVQCGSKSERINIRRVTPFSEDII* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |