| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300011910 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0118583 | Gp0137235 | Ga0119893 |
| Sample Name | Wastewater microbial communities from municipal sewage treatment plant in Nanjing, China - JXZ_IW_meta |
| Sequencing Status | Permanent Draft |
| Sequencing Center | Nanjing University |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 41928486 |
| Sequencing Scaffolds | 4 |
| Novel Protein Genes | 4 |
| Associated Families | 4 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana | 2 |
| All Organisms → cellular organisms → Eukaryota | 1 |
| Not Available | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Wastewater Microbial Communities From Municipal Sewage Treatment Plants In Nanjing, China |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Municipal Sewage Treatment Plants In Nanjing, China |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | China: Nanjing | |||||||
| Coordinates | Lat. (o) | N/A | Long. (o) | N/A | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F000331 | Metagenome / Metatranscriptome | 1285 | Y |
| F006296 | Metagenome / Metatranscriptome | 376 | Y |
| F059945 | Metagenome / Metatranscriptome | 133 | Y |
| F062748 | Metagenome / Metatranscriptome | 130 | N |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0119893_100406 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana | 4676 | Open in IMG/M |
| Ga0119893_108272 | All Organisms → cellular organisms → Eukaryota | 929 | Open in IMG/M |
| Ga0119893_115060 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana | 640 | Open in IMG/M |
| Ga0119893_118503 | Not Available | 570 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0119893_100406 | Ga0119893_1004064 | F059945 | MRSGVHVVCFYMHARRVVSRFDAKGHQELSGYELYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP* |
| Ga0119893_108272 | Ga0119893_1082721 | F006296 | VPRKASEVGACKELEGHIFTIGSGNKGKDGDMLRTSMEKMTTYIGTKFGDKAAQEWISGKKIVPTEPTYSQAIKTRHAARVKATKDRIDLRLRGLTTEKAAIQAELLGSPSDRTLLRELREVEDQLAKAEIELINEVDMKLTEDEKISHANAWRSHRETTESLKKSRGKVYSLLFGQCTQVLVDKMKQVMDWVAISESFDPTLLFKLIEKFVLKQFDNQYATAVLIAEQLSILSFRQDDHLGNAGYYDRFT |
| Ga0119893_115060 | Ga0119893_1150601 | F000331 | PTTVRNPQANAILERVHQVIGQMLRTAELDMAKSVVPDDVDVFIDNAAWAICSTYHTVLKASPGAAIFGRDMLFDIPFLADWNKIGDYRQSCSVKRENSKRIDYDYKVGDKVLIVKEGILCKAESRYGKEPWTITTVHTNGTIRVQCGSKSERINIRRVTPFSEDII* |
| Ga0119893_118503 | Ga0119893_1185031 | F062748 | LKAYITIVQERYPTLKYFKVGALKSLPGAKSQYVGHGRKLHSDYPQSVEELEPRFRPVSIIVGLNSFNFMWLNDRTSRESDIRKMTVYPGEMIMFTNHCLHAGGENNTNEEQTRLFAYLASDESHFPSGEVTTWDWQRGDNDPLISKPSSTANTALIRRPGTNQIRLITGRVATSIGRGTDR* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |