| Basic Information | |
|---|---|
| Taxon OID | 3300000270 Open in IMG/M |
| Scaffold ID | HuiMet_102864 Open in IMG/M |
| Source Dataset Name | Marine microbial mat from the Comau fjord, Huinay, Chile. Sample sequenced in March 2012 |
| Source Dataset Category | Metagenome |
| Source Dataset Use Policy | Open |
| Sequencing Center | OMICS Solution |
| Sequencing Status | Permanent Draft |
| Scaffold Components | |
|---|---|
| Scaffold Length (bps) | 1814 |
| Total Scaffold Genes | 4 (view) |
| Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
| Novel Protein Genes | 1 (view) |
| Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
| Associated Families | 1 |
| Taxonomy | |
|---|---|
| All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
| Source Dataset Ecosystem |
|---|
| Environmental → Aquatic → Marine → Intertidal Zone → Microbialites → Marine → Marine Microbial Communities From The Comau Fjord, Huinay, Region De Los Lagos, Chile |
| Source Dataset Sampling Location | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location Name | Chile: Los Lagos Region | |||||||
| Coordinates | Lat. (o) | -42.021639 | Long. (o) | -72.689161 | Alt. (m) | Depth (m) | Location on Map | |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F067737 | Metagenome / Metatranscriptome | 125 | N |
| Protein ID | Family | RBS | Sequence |
|---|---|---|---|
| HuiMet_1028642 | F067737 | N/A | MENTNLKLALREVGKLIRGNLKEGAKNDGFKASGKLDKSFKYRVEDNELYIFGEEYANALSKGIDKKGRYSKEMSSNLVKWAKIKGLRPQFRDKKGRFTKVTDRTWKSLGFVLARSIAGKSNARNPKNPKGGISERFGYKGSGFIKAVQEQTRTQIKNIITEAYKKDIEEQLNSITALK* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |