NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F104423

Metagenome Family F104423

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104423
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 87 residues
Representative Sequence VEVHRIRKAKSLYYKERYHIFLEMEKNRWLEIESLNGVTYDSIQTFLKCEKETGIRVVGFTDKNFQWGTIKDWDHSGIIKNLKAKK
Number of Associated Samples 72
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 83.00 %
% of genes near scaffold ends (potentially truncated) 19.00 %
% of genes from short scaffolds (< 2000 bps) 61.00 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface
(16.000 % of family members)
Environment Ontology (ENVO) Unclassified
(28.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(24.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 14.91%    β-sheet: 27.19%    Coil/Unstructured: 57.89%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.34.8.1: Fumarylacetoacetate hydrolase, FAH, N-terminal domaind1hyoa11hyo0.53743
b.33.1.1: Rieske iron-sulfur protein (ISP)d1jm1a_1jm10.51937
d.185.1.2: Autoinducer-2 production protein LuxSd4xcha_4xch0.50393

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00248Aldo_ket_red 34.00
PF00266Aminotran_5 9.00
PF02730AFOR_N 4.00
PF02729OTCace_N 2.00
PF00185OTCace 2.00
PF02597ThiS 2.00
PF13431TPR_17 1.00
PF00005ABC_tran 1.00
PF14905OMP_b-brl_3 1.00
PF13181TPR_8 1.00
PF00593TonB_dep_Rec 1.00
PF07676PD40 1.00
PF12801Fer4_5 1.00
PF00884Sulfatase 1.00
PF08530PepX_C 1.00
PF14453ThiS-like 1.00
PF15902Sortilin-Vps10 1.00
PF02748PyrI_C 1.00
PF01177Asp_Glu_race 1.00
PF13412HTH_24 1.00
PF00696AA_kinase 1.00
PF00892EamA 1.00
PF00899ThiF 1.00
PF02901PFL-like 1.00
PF13620CarboxypepD_reg 1.00
PF00251Glyco_hydro_32N 1.00
PF06808DctM 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG2414Aldehyde:ferredoxin oxidoreductaseEnergy production and conversion [C] 4.00
COG1977Molybdopterin synthase sulfur carrier subunit MoaDCoenzyme transport and metabolism [H] 2.00
COG2104Sulfur carrier protein ThiS (thiamine biosynthesis)Coenzyme transport and metabolism [H] 2.00
COG1621Sucrose-6-phosphate hydrolase SacC, GH32 familyCarbohydrate transport and metabolism [G] 1.00
COG1781Aspartate carbamoyltransferase, regulatory subunitNucleotide transport and metabolism [F] 1.00
COG1882Pyruvate-formate lyaseEnergy production and conversion [C] 1.00
COG2152Predicted glycosyl hydrolase, GH43/DUF377 familyCarbohydrate transport and metabolism [G] 1.00
COG2936Predicted acyl esteraseGeneral function prediction only [R] 1.00
COG3507Beta-xylosidaseCarbohydrate transport and metabolism [G] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.00 %
UnclassifiedrootN/A5.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004026|Ga0055443_10041740All Organisms → cellular organisms → Bacteria1132Open in IMG/M
3300004026|Ga0055443_10225941All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium592Open in IMG/M
3300004029|Ga0055442_10021310Not Available1486Open in IMG/M
3300004029|Ga0055442_10122811All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium799Open in IMG/M
3300004757|Ga0068409_14054All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium536Open in IMG/M
3300004758|Ga0068410_101254All Organisms → cellular organisms → Bacteria3313Open in IMG/M
3300004760|Ga0068404_100962All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium544Open in IMG/M
3300005254|Ga0068714_10060082All Organisms → cellular organisms → Bacteria2085Open in IMG/M
3300005782|Ga0079367_1006369All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes6301Open in IMG/M
3300005782|Ga0079367_1111528All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium1103Open in IMG/M
3300005822|Ga0078744_1005524All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium2917Open in IMG/M
3300005832|Ga0074469_10221410All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium653Open in IMG/M
3300005832|Ga0074469_11207882All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium500Open in IMG/M
3300005832|Ga0074469_11251152All Organisms → cellular organisms → Bacteria23204Open in IMG/M
3300005917|Ga0075115_10036360All Organisms → cellular organisms → Bacteria1920Open in IMG/M
3300008470|Ga0115371_11215550All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300008517|Ga0111034_1244642All Organisms → cellular organisms → Bacteria3656Open in IMG/M
3300009034|Ga0115863_1006995All Organisms → cellular organisms → Bacteria16803Open in IMG/M
3300009034|Ga0115863_1011953All Organisms → cellular organisms → Bacteria12346Open in IMG/M
3300009127|Ga0118724_1012916All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes9125Open in IMG/M
3300009135|Ga0118736_10117396All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium753Open in IMG/M
3300009136|Ga0118735_10023719All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium1912Open in IMG/M
3300009136|Ga0118735_10254788All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium591Open in IMG/M
3300009150|Ga0114921_10096136All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1958Open in IMG/M
3300009150|Ga0114921_10405447All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium987Open in IMG/M
3300009150|Ga0114921_10447934All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes939Open in IMG/M
3300009314|Ga0117908_1001636All Organisms → cellular organisms → Bacteria44207Open in IMG/M
3300009488|Ga0114925_10295494All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium1098Open in IMG/M
3300009488|Ga0114925_10443316All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium903Open in IMG/M
3300009528|Ga0114920_10036250All Organisms → cellular organisms → Bacteria2916Open in IMG/M
3300009528|Ga0114920_10060367All Organisms → cellular organisms → Bacteria2325Open in IMG/M
3300009528|Ga0114920_10219228All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium1269Open in IMG/M
3300009615|Ga0116103_1021040All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes2074Open in IMG/M
3300009788|Ga0114923_11693313All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium500Open in IMG/M
3300010330|Ga0136651_10304601All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes792Open in IMG/M
3300010392|Ga0118731_101017451All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium641Open in IMG/M
3300010392|Ga0118731_107222946All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium672Open in IMG/M
3300010430|Ga0118733_107391994All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium570Open in IMG/M
3300011118|Ga0114922_10000745All Organisms → cellular organisms → Bacteria31331Open in IMG/M
3300011118|Ga0114922_10059469Not Available3322Open in IMG/M
3300013090|Ga0163209_1104663All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium974Open in IMG/M
3300014903|Ga0164321_10037772All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes1760Open in IMG/M
3300014903|Ga0164321_10322461All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium741Open in IMG/M
3300014903|Ga0164321_10584614All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium573Open in IMG/M
3300014903|Ga0164321_10617527All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium559Open in IMG/M
3300014903|Ga0164321_10714735All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium525Open in IMG/M
3300014903|Ga0164321_10726143All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium521Open in IMG/M
3300017929|Ga0187849_1006767All Organisms → cellular organisms → Bacteria8589Open in IMG/M
3300017963|Ga0180437_10000086All Organisms → cellular organisms → Bacteria203274Open in IMG/M
3300017963|Ga0180437_10046739All Organisms → cellular organisms → Bacteria4092Open in IMG/M
3300017963|Ga0180437_10925667All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium625Open in IMG/M
3300017963|Ga0180437_11368030All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium500Open in IMG/M
3300017971|Ga0180438_11110357All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium571Open in IMG/M
3300017987|Ga0180431_10000058All Organisms → cellular organisms → Bacteria139853Open in IMG/M
3300017989|Ga0180432_10048006All Organisms → cellular organisms → Bacteria4036Open in IMG/M
3300018005|Ga0187878_1000663All Organisms → cellular organisms → Bacteria37332Open in IMG/M
3300021074|Ga0194044_10118774All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1059Open in IMG/M
3300021504|Ga0190344_1001826All Organisms → cellular organisms → Bacteria7395Open in IMG/M
3300022307|Ga0224507_10049965All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1645Open in IMG/M
3300022838|Ga0222681_1052913All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium661Open in IMG/M
(restricted) 3300022938|Ga0233409_10005366Not Available2813Open in IMG/M
(restricted) 3300023177|Ga0233423_10049871All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes1805Open in IMG/M
3300023249|Ga0222678_1075822All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium502Open in IMG/M
3300024263|Ga0209978_10015967All Organisms → cellular organisms → Bacteria3630Open in IMG/M
3300024429|Ga0209991_10029826All Organisms → cellular organisms → Bacteria2665Open in IMG/M
3300024429|Ga0209991_10087896All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1550Open in IMG/M
3300024432|Ga0209977_10001948All Organisms → cellular organisms → Bacteria9213Open in IMG/M
3300024432|Ga0209977_10108975Not Available1359Open in IMG/M
3300025561|Ga0210119_1077543All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium641Open in IMG/M
3300025628|Ga0208902_1034132All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium1665Open in IMG/M
3300027690|Ga0209164_1114403All Organisms → cellular organisms → Bacteria1034Open in IMG/M
(restricted) 3300027856|Ga0255054_10000469All Organisms → cellular organisms → Bacteria23872Open in IMG/M
(restricted) 3300027861|Ga0233415_10014699All Organisms → cellular organisms → Bacteria3083Open in IMG/M
(restricted) 3300027881|Ga0255055_10034584All Organisms → cellular organisms → Bacteria2857Open in IMG/M
(restricted) 3300027881|Ga0255055_10150186All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium1277Open in IMG/M
3300027888|Ga0209635_10643831All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium784Open in IMG/M
3300027896|Ga0209777_10059951All Organisms → cellular organisms → Bacteria3391Open in IMG/M
3300027899|Ga0209668_10567346All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium757Open in IMG/M
3300027900|Ga0209253_10026648All Organisms → cellular organisms → Bacteria4851Open in IMG/M
3300027902|Ga0209048_10002249All Organisms → cellular organisms → Bacteria19334Open in IMG/M
3300027917|Ga0209536_101689534All Organisms → cellular organisms → Bacteria766Open in IMG/M
(restricted) 3300028045|Ga0233414_10078313All Organisms → cellular organisms → Bacteria1402Open in IMG/M
3300031274|Ga0307442_1230300All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium507Open in IMG/M
3300031364|Ga0307445_10299965Not Available545Open in IMG/M
3300031537|Ga0307419_10031555All Organisms → cellular organisms → Bacteria2305Open in IMG/M
3300031539|Ga0307380_10003062All Organisms → cellular organisms → Bacteria23382Open in IMG/M
3300031539|Ga0307380_10007894All Organisms → cellular organisms → Bacteria13716Open in IMG/M
3300031834|Ga0315290_11439400All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium562Open in IMG/M
3300031834|Ga0315290_11659083All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium514Open in IMG/M
3300031873|Ga0315297_10084050All Organisms → cellular organisms → Bacteria2494Open in IMG/M
3300031952|Ga0315294_10076386All Organisms → cellular organisms → Bacteria3513Open in IMG/M
3300032046|Ga0315289_10029169All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes7249Open in IMG/M
3300032053|Ga0315284_10825534All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300032143|Ga0315292_10039175All Organisms → cellular organisms → Bacteria3440Open in IMG/M
3300032262|Ga0316194_10257503All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium1111Open in IMG/M
3300032397|Ga0315287_11762133All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium691Open in IMG/M
3300032397|Ga0315287_12044817All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium630Open in IMG/M
3300032401|Ga0315275_10381804All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium1579Open in IMG/M
3300033429|Ga0316193_11620292All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium514Open in IMG/M
3300034782|Ga0373573_0220775All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium593Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface16.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment10.00%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment7.00%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater6.00%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment6.00%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment5.00%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands5.00%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment4.00%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh3.00%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)3.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.00%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment2.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine2.00%
SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Sediment2.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.00%
Sediment, IntertidalEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal2.00%
Marine SedimentEnvironmental → Aquatic → Marine → Cold Seeps → Sediment → Marine Sediment2.00%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake2.00%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water2.00%
Marine SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment2.00%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil2.00%
Enrichment CultureEngineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture2.00%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater1.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.00%
SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Sediment1.00%
Hydrothermal Vent Microbial MatEnvironmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Vent Microbial Mat1.00%
Marine Hydrothermal VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Hydrothermal Vent1.00%
Marine SedimentEnvironmental → Aquatic → Marine → Cold Seeps → Sediment → Marine Sediment1.00%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment1.00%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment1.00%
Marine SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment1.00%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004026Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2EnvironmentalOpen in IMG/M
3300004029Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordB_D2EnvironmentalOpen in IMG/M
3300004757Marine sediment microbial communities from Formosa Ridge, offshore Taiwan - G2-2EnvironmentalOpen in IMG/M
3300004758Marine sediment microbial communities from Formosa Ridge, offshore Taiwan - G2-3EnvironmentalOpen in IMG/M
3300004760Marine sediment microbial communities from Formosa Ridge, South China Sea G1-3EnvironmentalOpen in IMG/M
3300005254Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaGEngineeredOpen in IMG/M
3300005782Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf, PM3EnvironmentalOpen in IMG/M
3300005822Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, MM1EnvironmentalOpen in IMG/M
3300005832Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBBEnvironmentalOpen in IMG/M
3300005917Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKHEnvironmentalOpen in IMG/M
3300008470Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563EnvironmentalOpen in IMG/M
3300008517Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 175 cmbsf. Combined Assembly of Gp0128389 and Gp0131431 MM4PM4EnvironmentalOpen in IMG/M
3300009034Intertidal mud flat sediment archaeal communities from Garolim Bay, Chungcheongnam-do, KoreaEnvironmentalOpen in IMG/M
3300009127Combined Assembly of Gp0137036, Gp0137038EnvironmentalOpen in IMG/M
3300009135Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 382 cmbsfEnvironmentalOpen in IMG/M
3300009136Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 82 cmbsfEnvironmentalOpen in IMG/M
3300009150Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaGEnvironmentalOpen in IMG/M
3300009314Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 900m, 250-2.7um, replicate aEnvironmentalOpen in IMG/M
3300009488Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaGEnvironmentalOpen in IMG/M
3300009528Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaGEnvironmentalOpen in IMG/M
3300009615Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100EnvironmentalOpen in IMG/M
3300009788Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaGEnvironmentalOpen in IMG/M
3300010330Marine hydrothermal vent microbial communities from Guaymas Basin, Gulf of California to study Microbial Dark Matter (Phase II) - Marker 14 Mat core 4569-2 3-6 cm metaGEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300013090Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_160mEnvironmentalOpen in IMG/M
3300014903Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay12, Core 4567-28, 21-24 cmEnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300017971Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaGEnvironmentalOpen in IMG/M
3300017987Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaGEnvironmentalOpen in IMG/M
3300017989Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_2 metaGEnvironmentalOpen in IMG/M
3300018005Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150EnvironmentalOpen in IMG/M
3300021074Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-17mEnvironmentalOpen in IMG/M
3300021504Hydrothermal vent microbial mat bacterial communities from Southern Trench, Guaymas Basin, Mexico - 4872-13-2-3_MGEnvironmentalOpen in IMG/M
3300022307Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_13EnvironmentalOpen in IMG/M
3300022838Saline water microbial communities from Ace Lake, Antarctica - #1006EnvironmentalOpen in IMG/M
3300022938 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_13_MGEnvironmentalOpen in IMG/M
3300023177 (restricted)Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_112_MGEnvironmentalOpen in IMG/M
3300023249Saline water microbial communities from Ace Lake, Antarctica - #937EnvironmentalOpen in IMG/M
3300024263Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024429Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024432Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025561Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025628Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKH (SPAdes)EnvironmentalOpen in IMG/M
3300027690Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG (SPAdes)EngineeredOpen in IMG/M
3300027856 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300027881 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27EnvironmentalOpen in IMG/M
3300027888Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)EnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300031274Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-30EnvironmentalOpen in IMG/M
3300031364Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-30EnvironmentalOpen in IMG/M
3300031537Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-30EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031952Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40EnvironmentalOpen in IMG/M
3300032046Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032262Coastal sediment microbial communities from Maine, United States - Cross River sediment 1EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300033429Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2EnvironmentalOpen in IMG/M
3300034782Sediment microbial communities from coastal wetland in Texas, United States - D0606M02EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0055443_1004174023300004026Natural And Restored WetlandsMGDNLDVHRIRKAKRLYDKSHFHIFLEVEKNRWLEIESLDRVSYESIQSFLQSEKETGIRVVGFTDQNFQWGTIKEWEHSGIIKDLKLNKG*
Ga0055443_1022594123300004026Natural And Restored WetlandsVEVHRIRKSKALYDKKRSHIFLEVEKNRWLEIETLVGVTYESIQTFLECEKKTGIRIVGFTEQNFQWGTIKDWSHSGIIKDLKSKKK*
Ga0055442_1002131013300004029Natural And Restored WetlandsVEVHRIRKSKALYDKKRSHIFLEVEKNRWLEIETLVGVTYESIQTFLECEKKTGIRIVGFTEQNFQWGTIK
Ga0055442_1012281113300004029Natural And Restored WetlandsMGDNLDVHRIRKAKRLYDKSHFHIFLEVEKNRWLEIESLDGVSYESIQSFLQSEKETGIRVVGFTDQNFQWGTIKEWEHSGIIKDLKLDKG*
Ga0068409_1405413300004757Marine SedimentVEVHRIRKAKSLYHRERYHILLEIEKDRWLEIESLNGITYDSIQTFLKSEKETGIRVVGFTDKSFQWGTIKDWSHSGIIKNLKTKK*
Ga0068410_10125423300004758Marine SedimentVEVHRIRKAKSLYHRERYHILLEIEKDRWLEIESLNGVTYDSIQTFLKSEKETGIRVVGFTDKSFQWGTIKDWNHSGIIKNLKTKK*
Ga0068404_10096213300004760Marine SedimentVEVHRIRKAKSLYHRERYHILLEVEKDRWLEIESLNGVTYDSIQTFLKSEKETGIRVVGFTDKSFQWGTIKDWNHSGIIKNLKIKK*
Ga0068714_1006008213300005254Enrichment CultureMKVHRIRKAKSLYHPARDHIFLEVEKNRWLEIESLDGLDYDSIQVFLECEKKARLRVVGFTDQNFQWGTIKDWNDSGVIRDSKRKT*
Ga0079367_100636933300005782Marine SedimentVEVYRIRKAKALYDKEKYHIFLELEKNRWLEIESLSGVTYDSIQIFLECEKETGIRIVGFTDQNFQWGTIKDWSHSGIIKDLKSKNK*
Ga0079367_111152813300005782Marine SedimentMGDIVDVHRIRKAKRLYDTSRFHIFLEVEKNRWLEIESLNGVTYDSIQKFLKSEKETGIRVVGFTDQNFQWGTIKEWEHSGIIKDLKLKKG*
Ga0078744_100552443300005822Marine SedimentVDVHRIRKAKRLYDKSRFHIFLEVEKNRWLEIESLDGVSYESIQSFLEKEKETGIRVVGFTDQNFQWGTIKEWEHAGIIKDLKLKTG*
Ga0074469_1022141013300005832Sediment (Intertidal)VRSVQTFEEDIVDVHRIRKAKRRYDKSRFHIFLEVEKNRWLEIESLSGVTYDSIQKFLKSEEETGISVVGFTDQNFQWGTIKEWEHSGIIKDLKLKKG*
Ga0074469_1120788213300005832Sediment (Intertidal)MHEALRTGGAVDVHRIRKAKKLYKKGKYHIFIEVEKNRWLEIEALDGVTYASIQTFLKCENETKIKVVGFTDQNFQWGTIKDWEHSGIIKNLKKTI*
Ga0074469_11251152223300005832Sediment (Intertidal)VEVHRIRKAKALYDKEKHHIFLEVEKNRWLEIESLDGVTFDSIQAFLKSEKETGIRIVGFTDQNFQWGTIKDWSHSGIIKNFKIKE*
Ga0075115_1003636023300005917Saline LakeMISKPVGDMKAHRIRKAESLYNKERKHIFLEVEKSRWLEIESLDGVTYDSIQKFVENENKTGIKIVGFTDKHFQYGTIKDWYHSGIIMDIKKKNDI*
Ga0115371_1121555013300008470SedimentMISKPVGDMKAHRIRKAKSLYNKERQHIFLEVEKSRWLEIESLNGVTYDSIQKFVECENKTGIKIVGFTDKHFQYGTIKDWGHSGIIMDLKKK*
Ga0111034_124464233300008517Marine SedimentMYDEGKYHIFLEIEKRRWLEIESLKSVTYDSIQNFLKCEKETGIKIVGFTDQNFQWGTIKDWEHSGIIKDLKRK*
Ga0115863_100699523300009034Sediment, IntertidalVEVHRIRKAKSLYYKERYHIFLEMEKNRWLEIESLNGVTYDSIQTFLKCEKETGIRVVGFTDKNFQWGTIKDWDHSGIIKNLKAKK*
Ga0115863_101195323300009034Sediment, IntertidalMKVHRIRKAKRLYDKENYHIFLEVEKNRWLEIESLDGVTYDSIQIFLECEKKTGIRVVGFTDQNFQWGTIKDWDHSGIIKNLKKITEN*
Ga0118724_101291653300009127MarineVDVHRIRKAKMLYKKGEYHIFIEVGKNRWLEIESLDGVTYDSIQSFLSCEKETGIRVVGFTDQNFQWGTIKDWEHSGIIKNLKRTI*
Ga0118736_1011739613300009135Marine SedimentKAKALYDKEKYHVFLEVEKNRWLEIESLNGVSYDSIQTFLESEKETGIRIVGFTDQNFQWGTIKDWSHSGIIKDLKSKKKIIIRR*
Ga0118735_1002371933300009136Marine SedimentVEVHRIRKAKSLYHKERYHILLEVEKDRWLEIESLNGVTYESIQTFLKCEKETGIRMVGFTERNFQWGTIKDWNHSGIIKNLKTKE*
Ga0118735_1025478823300009136Marine SedimentVEVHRIRKAKSLYHRERYHILLEIEKDRWLEIESLNGVTYDSIQTFLKSEKETGIRVVGFTDKSFQWGTIKDWFHSGIIKNLKTKK*
Ga0114921_1009613623300009150Deep SubsurfaceVEVHRIRKAKSLYHRERYHILLEVEKDRWLEIESLNGVTYDSIQTFLKCEKETGIRVVGFTDRSFQWGTIKDWDHSGIIKNLKTKKS*
Ga0114921_1040544723300009150Deep SubsurfaceVKAHRIRKAKKLYDKERYHIFLEVEKNRWFEIESLNGVTYDSIQTFLKCEKETGIRVVGFTDKSFQWGTIKDWLHSGIIKSLKIKK*
Ga0114921_1044793423300009150Deep SubsurfaceVEVHRIRKAKSLYHRERYHILLEVEKDRWLEIESLNGVTYDSIQTFLKSEKETGIRVVGFTDKSFQWGTIKDWNHSGIIKNLKTKK*
Ga0117908_1001636313300009314MarineMKAHRIRKAKSLYNKERQHIFLEVEKTRWLEIESLDGITFDSIQKFVECENKTGIKIVGFTDKHFQYGTIKDWSHSGIIMDLKKKNDI*
Ga0114925_1029549413300009488Deep SubsurfaceVWKNREFSGEIVEAHRIRKARRLYDKTRYHIFLEVEKNRWLEVESLNEVTYDSIQSFLESEKETGIRVVGFTDKNFQWGTIKEWEHSGVVRDLKLTKG*
Ga0114925_1044331623300009488Deep SubsurfaceVEVHRIRKAKSLYHKERYHILLEVEKDRWLEIESLNGVTYESIQTFLKCEKETGIRVVGFTDKSFQWGTIKDWDHSGIIKNLKTKK*
Ga0114920_1003625043300009528Deep SubsurfaceVEVHRIRKAKSRYHRERYHILLEVEKDRWLEIESLNGVTYDSIQTFLKCEKETGISVVGFTDRSFQWGTIKDWNHSGIIKNLKTKKL*
Ga0114920_1006036713300009528Deep SubsurfaceKYHILLEVEKDRWLEIESLNGVTYDSIQTFLKSEKETGIRAVGFTDKSFQWGTIKDWNHSGIIKNLKTKK*
Ga0114920_1021922813300009528Deep SubsurfaceVEVHRIRKAKSLYHRERYHILLEIEKDRWLEIESLNGVTYDSIQTFLKSEKETGIRVVGFTEKSFQWGTIKDWFHSGIIKNLKAKKI*
Ga0116103_102104033300009615PeatlandMNVHRVRKSKSLYDNARDHIFLEVEKNRWLEIESLDGLTHDSIETFLDCEVRTRLRVVGFTDQNFQWGTIKDWIDSGIIKGLMKPTRN*
Ga0114923_1169331313300009788Deep SubsurfaceRKARRLYDKTRYHIFLEVEKNRWLEVESLNEVTYDSIQSFLECEKETGIRVVGFTDKNFQWGAIKEWEHSGVVRDLKLTKGQTTLVENK*
Ga0136651_1030460123300010330Marine Hydrothermal VentMMSKPVREMKAHRIRKAESLYNKERKHIFLEVEKSRWLEIESLDGVTYDSIQKFVENENKTGIKIVGFTDKHFQYGTIKDWYHSGIIMDIKKKNDI*
Ga0118731_10101745113300010392MarineLDAHRIRKAKNIYDKSKFYIFLEVEKSRWLQIETLNGVTHDSIHTFLQSEQETGIKIVGFTDQNFQWGTIKDWDHSGIIMDLSQKNISNNT
Ga0118731_10722294613300010392MarineMALHTGGVVNVHRVRKAKKLYEKGNYHIFIEVEKNRWLEIESLDGITYDSIQTFLKCENETRVRVVGFTDQNFQWGTIKDWEHSGIIKNHKRKI*
Ga0118733_10739199413300010430Marine SedimentHRVRKAKKLYEKGNYHIFIEVEKNRWLEIESLDGITYDSIQTFLKCENETRVRVVGFTDQNFQWGTIKDWEHSGIIKNHKRKI*
Ga0114922_1000074553300011118Deep SubsurfaceMKAHRIRKAKSLYNKERQHIFLEVEKSRWLEIESLDGVTYDSIQKFVEVENKTGIKIVGFTDKHFQYGTIKDWSHSGIIMDLKKKNDI*
Ga0114922_1005946913300011118Deep SubsurfaceVEVHRIRKTKTLYDKEKYHIFLEVEKNRWLELESLDGVTYESIQTFLKCEKETGIRIVGFTDQNFQWGTIKDWSHSGIIKNLKSKNENSNRR*
Ga0163209_110466313300013090FreshwaterMRAHRIRKAKSLYDPEKEHIFLEVEKNRWLEVESLDSLDADSIQAFLECEKKTGLRVVGFTDQNFQWGTIKDWNDSGIIRAPDRKT*
Ga0164321_1003777213300014903Marine SedimentMKAHRIRKAKSLYNKERQHIFLEIEKSRWLEIESLDGVTYDSIQKFVECENKTGIKIVGFTDKHFQYGTIKDWSHSGIIMDLKKKNDI*
Ga0164321_1032246123300014903Marine SedimentVEVHRIRKAKSLYHKERYHILLEVEKDRWLEIESLNGVTYESIQTFLKCEKETGIRVVGFTDKSFQWGTIKDWDHSGIIKNLKTKE*
Ga0164321_1058461413300014903Marine SedimentVEVHRIRKAKSLYHRERYHILLEVEKGRWLEIESLNGVTYDSIQTFLKSEKETGIRVVGFTDKSFQWGTIKDWNHSGIIKNLKIKK*
Ga0164321_1061752723300014903Marine SedimentVEVHRIRKAKALYDKEKYHIFLEVEKNRWLEIESLNGVSYDSIQTFLECEKETGIRMVGFTDQNFQWGTIKEWNHSGIIKDL
Ga0164321_1071473513300014903Marine SedimentVEVHRIRKAKALYDKEKYHVFLEVEKNRWLEIESLNGVSYDSIQTFLESEKETGIRIVGFTDQNFQWGTIKDWSHSGIIKDLKSRK*
Ga0164321_1072614313300014903Marine SedimentVEVHRIRKAKTLYDKKRYHIFLEVEKNRWLEIESLNGVTYDSIQTFLECEKETGIRMVGFTDQNFQWGTIKEWNHSGIIKDL
Ga0187849_100676743300017929PeatlandMNVHRVRKSKSLYDNARDHIFLEVEKNRWLEIESLDGLTHDSIETFLDCEVRTRLRVVGFTDQNFQWGTIKDWIDSGIIKGLMKPTRN
Ga0180437_10000086663300017963Hypersaline Lake SedimentVDVHRIRKAKKLYQKDKYHIFLELEKNRWLEIESLEGVTYASIQAFLNCEMETGIRAVGFTDQNFQWGTIKDWDHSGIIKNINKKI
Ga0180437_1004673923300017963Hypersaline Lake SedimentLDVHRIRKAKRLYDKTQYHIFLEVEKNRWLEIESLSGVTFDSIQNFLKSEKETGIRVVGFTDQNFQWGTIKEWEHSGIIKDLKLNKDKKT
Ga0180437_1092566713300017963Hypersaline Lake SedimentMTMRTGGVLDVHRIRKARKLYKKGQHHLFLEVDKNRWLEIESLDGVTHDSIQTFLKCEKETGIKVVGFTDQNFQWGTIKDWDHSGIIKNIKTKK
Ga0180437_1136803013300017963Hypersaline Lake SedimentVDVHRIRKAKKLYEKGKYHIFIEVEKNRWLEIETLDGITYDSIQTFLKCEKETGIRVAGFTDQNFQWGTVKDWNHSGIIKNLKKQTLI
Ga0180438_1111035713300017971Hypersaline Lake SedimentVDVHRIRKAKKLYEKGKYHIFIEVEKNRWLEIETLDGITYDSIQTFLKCEKETGIRVAGFTDQNFQWGTVKDWNHSGIIK
Ga0180431_10000058643300017987Hypersaline Lake SedimentMTMRTGGVLDVHRIRKARKLYKKGQHHLFLEVGKNRWVEIESLDGVTHDCIQTFLKCEKETGIKVVGFTDQNFQWGTIKDWDHSGIIKNIKTKK
Ga0180432_1004800643300017989Hypersaline Lake SedimentVKAHRIRKARSLYRDSHHHVFLELEKNRWLEIESLDGVTYDAIQKYLACEKETGIRVVGFTDQNFQWGTVKEWNHSGIIKNIKKDR
Ga0187878_1000663103300018005PeatlandMNVHRVRRSRSLRENARDHIFLEVEKNRWLEIEGLDGLNHDSIQAFLDCERRTGMRVVGFTDQNFQWGTIKDWIDSGIIKDLMRPS
Ga0194044_1011877413300021074Anoxic Zone FreshwaterMKTHRIRQAKSLYAKKRKHIFLEIEKNRWLEIESLARVNCDTIMAFLNNEKETGIKAVGFTDQSFQIGTIKDWEEAGIIKKK
Ga0190344_100182643300021504Hydrothermal Vent Microbial MatMMSKPVREMKAHRIRKAESLYNKERKHIFLEVEKSRWLEIESLDGVTYDSIQKFVENENKTGIKIVGFTDKHFQYGTIKDWYHSGIIMDIKKKNDI
Ga0224507_1004996533300022307SedimentVEVHRIRKAKALYDKEKHHIFLEVEKNRWLEIESLDGVTFDSIQAFLKSEKETGIRIVGFTDQNFQWGTIKDWSHSGIIKNFKIKE
Ga0222681_105291323300022838Saline WaterMISKPVGDMKAHRIRKAESLYNKERKHIFLEVEKSRWLEIESLDGVTYDSIQKFVENENKTGIKIVGFTDKHFQYGTIKDWYHSGII
(restricted) Ga0233409_1000536633300022938SeawaterVEVHRIRKAKALYDKERSHIFLEVEKNRWLEIESLNGVTYDSIQTFLDCEKETGISIVGFTDQNFQWGTIKDWSHSGIIKDINKKRKITIRR
(restricted) Ga0233423_1004987133300023177FreshwaterMKAHRIRKAKSLYDPEKEHIFLEVEKNRWLEVETLNGLDSGSIRAYLESEKKTGLRVVGFTDQNFQWGTIKDWADSGIIRTPDRKR
Ga0222678_107582213300023249Saline WaterMKAHRIRKAESLYNKERKHIFLEVEKSRWLEIESLDGVTYDSIQKFVENENKTGIKIVGFTDKHFQYGTIKDWYHSGIIMDIKKK
Ga0209978_1001596723300024263Deep SubsurfaceVEVHRIRKAKSLYHREKYHILLEVEKDRWLEIESLNGVTYDSIQTFLKSEKETGIRVVGFTDKSFQWGTIKDWNHSGIIKNLKTKK
Ga0209991_1002982623300024429Deep SubsurfaceVEVHRIRKAKSRYHRERYHILLEVEKDRWLEIESLNGVTYDSIQTFLKCEKETGISVVGFTDRSFQWGTIKDWNHSGIIKNLKTKKL
Ga0209991_1008789623300024429Deep SubsurfaceVEVHRIRKAKSLYHRERYHILLEIEKDRWLEIESLNGVTYDSIQTFLKSEKETGIRVVGFTEKSFQWGTIKDWFHSGIIKNLKAKKI
Ga0209977_1000194863300024432Deep SubsurfaceVEVHRIRKAKSLYHRERYHILLEIEKDRWLEIESLNGVTYDSIQTFLKSEKETGIRVVGFTDKSFQWGTIKDWNHSGIIKNLKTKK
Ga0209977_1010897523300024432Deep SubsurfaceVEVHRIRKAKSLYHKERYHILLEVEKDRWLEIESLNGVTYESIQTFLKCEKETGIRVVGFTDKSFQWGTIKDWDHSGIIKNLKTKK
Ga0210119_107754313300025561Natural And Restored WetlandsVEVHRIRKSKALYDKKRSHIFLEVEKNRWLEIETLVGVTYESIQTFLECEKKTGIRIVGFTEQNFQWGTIKDWSHSGIIKDLKSKKK
Ga0208902_103413223300025628Saline LakeMISKPVGDMKAHRIRKAESLYNKERKHIFLEVEKSRWLEIESLDGVTYDSIQKFVENENKTGIKIVGFTDKHFQYGTIKDWYHSGIIMDIKKKNDI
Ga0209164_111440323300027690Enrichment CultureLPQEISLVFWTGGPMKVHRIRKAKSLYHPARDHIFLEVEKNRWLEIESLDGLDYDSIQVFLECEKKARLRVVGFTDQNFQWGTIKDWNDSGVIRDSKRKT
(restricted) Ga0255054_1000046943300027856SeawaterVEAHRIRKAKSLYHRERYHILLEVEKDRWLEIESLNGVTYDSIQTFLKCEKETGIRVVGFTDKSFQWGTIKDWNHSGIIKNLKTKK
(restricted) Ga0233415_1001469923300027861SeawaterMISNPVGEMKAHRIRKAESLYNKERKHIFLEVEKSRWLEIESLDGVTYDSIQKFVENENKTGIKVVGFTDKHFQYGTIKDWYHSGIIMDIKKKNDI
(restricted) Ga0255055_1003458433300027881SeawaterVDVYRIRKAKSLYHKDKPHIFLEVEKNRWFEIESLTGVTYKSIQDFLKCERESGIKIVGFTDQNFQWGTIKDWFHSGIIKDLKNE
(restricted) Ga0255055_1015018623300027881SeawaterLDAHRIRKAKNIYDKSKFYIFLEVEKSRWLQIETLNGVTHDSIHTFLQSEQETGIKIVGFTDQNFQWGTIKDWDHSGIIMDLSQKNISNNTGG
Ga0209635_1064383113300027888Marine SedimentVDVHRIRKAKSLYNKDNPHIFLEVEKNRWLEVESLAGVTYKSIQDFLKCERETGIKIVGFTDQNFQWGTIKDWFHSGIIKNLKK
Ga0209777_1005995143300027896Freshwater Lake SedimentMRLEPMNVHRIRISKALCDGTRDHIFLEVEKNRWLEVEGLRGLDHGSIQAFLDCETRTGLRVVGFTDQNFQWGTIKDWNDSGIIKDLKKRP
Ga0209668_1056734623300027899Freshwater Lake SedimentVKAHRIRSARDLYDPKRRHIFLEVEKDRWLEIESSAGLSHGAIEAFLRAEKEAGLRVVGFTDRNFQWGTIKDWNDSGLVREPAGKG
Ga0209253_1002664843300027900Freshwater Lake SedimentMKAHRIRKAKSLYDPEKEHIFLEVEKNRWLEVESLDSLDSDSIRAFLECEKKTGLRVVGFTDQNFQWGTIKDWDDSGIIRALDRKT
Ga0209048_1000224983300027902Freshwater Lake SedimentMKVHRLRRSKAPYSGTGEHIFLEVEKNRWLEIEGWHGLDHDSIQAFLDCEARTGLRVVGFTDQNFQWGTIKEWTDSGIIKDLKKRP
Ga0209536_10168953423300027917Marine SedimentVNAHRIRKARRLYDKTKHHIFLEVEKNRWLEIESLTGVTYDSIQTFLKSEKETGIRVVGFTDQNFQWGTIKEWEHSGIIKDLKLKKE
(restricted) Ga0233414_1007831323300028045SeawaterMISKPVGDMKAHRIRKAESLYNKERKHIFLEVEKSRWLEIESLDGVTYDSIQKFVENENKTGIKVVGFTDKHFQYGTIKDWYHSGIIMDIKKKNDR
Ga0307442_123030013300031274Salt MarshLDVYRIRKARRLYDKTRYHIFLEVEKNRWLEIESLNGVTYDSIQDFLECEKETGIRVVGFTDQNFQWGTIKDWDHSGIIKK
Ga0307445_1029996523300031364Salt MarshVYRIRKARRLYDKTRYHIFLEVEKNRWLEIESLNGVTYDSIQDFLECEKETGIRVVGFTDQNFQWGTIKDWDHSGIIKK
Ga0307419_1003155523300031537Salt MarshVDVHRIRKAKRLYDKSRFHIFLEVEKNRWLEIESLSDVTYDSIQKFLESEKETGIRVVGFTDQNFQWGTIKEWEHSGIIKDLKLKTG
Ga0307380_10003062123300031539SoilVDVHRIRKAKRRYDKSRFHIFLEVEKNRWLEIESLSGVTYDSIQKFLKSEEETGISVVGFTDQNFQWGTIKEWEHSGIIKDLKLKKG
Ga0307380_1000789483300031539SoilMKAHRIRKAKSLYTNKRKHIFLEIEKNRWLEVESLSRVNWDTIMAFLKCEKETGIRAVSFTDQSFQVGTIKDWDDAGIIKKN
Ga0315290_1143940023300031834SedimentMKAHRIRTAKSLYDQTRDHVFLEIERNRWLEIESMDGLNYDSIQAFLNCEKETGLRVVGFTDRNFQWGTIKDWRDSGIIRDLKRSE
Ga0315290_1165908313300031834SedimentGGPMRAHRIRTAKSLYDQARGHIFLEMERNRWLEVESLDGLGYDSIQAFLKCEEDTGLRVVGFTDQNFQWGTIKDWSDSGIIRDLKRKT
Ga0315297_1008405033300031873SedimentMRAHRIRTAKSLYDQARGHIFLEMERNRWLEVESLDGLDYDSIQAFLKCEEDTGLRVVGFTDQNFQWGTIKDWSDSGIIRDLKRKT
Ga0315294_1007638613300031952SedimentMEAHRIRKAKSLYVPVKDHIFLEVEKNRWLEIESLDRLNYDSIQAFLESEKKTGLRVVGFSDQNFQWGTIKDWSDSGIIRDLKGK
Ga0315289_1002916943300032046SedimentMEAHRIRKAKSLYVPVKDHIFLEVEKNRWLEIESLDRLNYDSIQAFLESEKKTGLRVVGFSDQNFQWGTIKDWSDSGIIRDLKGKT
Ga0315284_1082553413300032053SedimentLYDQTRDHVFLEIERNRWLEIESMDGLNYDSIQAFLNCEKETGLRVVGFTDRNFQWGTIKDWRDSGIIRDLKRSE
Ga0315292_1003917513300032143SedimentTERGAVISPLELSRAGGSMKAHRIRTAKSLYDQTRDHVFLEIERNRWLEIESMDGLNYDSIQAFLNCEKETGLRVVGFTDRNFQWGTIKDWRDSGIIRDLKRSE
Ga0316194_1025750323300032262SedimentMLKAHRIRKAKNIYDKSKFYIFLEVEKGRWLQIETLNGVTHDSIHTYLQSEQETGIKIVGFTDQNFQWGTIKDWDHSGIIMDLNHKNITNKLEVRNGIS
Ga0315287_1176213333300032397SedimentAKSLYDQAKSHIFLEMERNRWLEVESLDGLGYDSIQAFLKCEEDTGLRVVGFTDQNFQWGTIKDWSDSGIIRDLKRKT
Ga0315287_1204481713300032397SedimentMKAHRIRTAKSLYDQARDHVFLEIERDRWLEIESMDGLNYDSIRAFLKCEKETGLRVVGFTDRNFQWGTIKDWQDSGIIRDLKGSE
Ga0315275_1038180423300032401SedimentMEAHRIRKAKSLYVPVKDHIFLEVEKNRWLEIESLDRLNYDSIQAFLESEKKTGLRVVGFSDQNFQWGTIKDWSDAGVIRDLKRKT
Ga0316193_1162029233300033429SedimentMLKAHRIRKAKNIYDKSKFYIFLEVEKSRWLQVETLNGITHDSIHTYLQSEQETGIKIVGFTDQNFQWGTIKDWDHSGVIMDLNHKNITNKLEVRN
Ga0373573_0220775_272_5323300034782SedimentVDVHRIRKAKKLYKKEQYHIFIEVEKNRWLEIETLNGVNYDSIQNFLRCEEETGMKVVGFTDQNFQWGTIKEWEHSGIIKDLAKKK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.