Metagenome / Metatranscriptome Family F104089

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104089
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	131 residues
Representative Sequence	VPSAPELYPLIEAWIQALPASTALHATALSALAHLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDSVRCGGWEVFTLGVVWHGRVLP
Number of Associated Samples	89
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.00 %
% of genes near scaffold ends (potentially truncated)	96.04 %
% of genes from short scaffolds (< 2000 bps)	96.04 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.010 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.733 % of family members)
Environment Ontology (ENVO)	Unclassified (36.634 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.535 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.30% β-sheet: 13.92% Coil/Unstructured: 41.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF08483	Obsolete Pfam Family	0.99
PF00296	Bac_luciferase	0.99
PF00474	SSF	0.99
PF00078	RVT_1	0.99
PF00872	Transposase_mut	0.99
PF03992	ABM	0.99
PF00440	TetR_N	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.99
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	92.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.94 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	90.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	90.10 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.96 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.99 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	90.10 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.97 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.99 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.99 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.99 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	90.10 %
Acidocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella	2.97 %
Giesbergeria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Giesbergeria	0.99 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.99 %
Methylomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium	0.99 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	90.10 %
unclassified Acidocella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella	2.97 %
Giesbergeria anulus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Giesbergeria → Giesbergeria anulus	0.99 %
Azospirillum halopraeferens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum halopraeferens	0.99 %
Methylomicrobium album	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium → Methylomicrobium album	0.99 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	90.10 %
Acidocella sp. MX-AZ02	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella → Acidocella sp. MX-AZ02	2.97 %
Giesbergeria anulus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Giesbergeria → Giesbergeria anulus	0.99 %
Azospirillum halopraeferens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum halopraeferens	0.99 %
Methylomicrobium album	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium → Methylomicrobium album	0.99 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %
Unclassified	root	N/A	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001380\|JGI1356J14229_10146605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	752	Open in IMG/M
3300002568\|C688J35102_117990304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	521	Open in IMG/M
3300002912\|JGI25386J43895_10187965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum halopraeferens	518	Open in IMG/M
3300004081\|Ga0063454_100221264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1100	Open in IMG/M
3300005167\|Ga0066672_10585414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium → Methylomicrobium album	723	Open in IMG/M
3300005174\|Ga0066680_10771789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300005177\|Ga0066690_10888927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M
3300005181\|Ga0066678_11095398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300005187\|Ga0066675_10548406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Giesbergeria → Giesbergeria anulus	867	Open in IMG/M
3300005363\|Ga0008090_15155221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	590	Open in IMG/M
3300005436\|Ga0070713_102261815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella → Acidocella sp. MX-AZ02	526	Open in IMG/M
3300005447\|Ga0066689_10565240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	719	Open in IMG/M
3300005468\|Ga0070707_102207826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300005559\|Ga0066700_10725099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella → Acidocella sp. MX-AZ02	679	Open in IMG/M
3300005560\|Ga0066670_10814811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	566	Open in IMG/M
3300005561\|Ga0066699_10081512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2088	Open in IMG/M
3300005561\|Ga0066699_10256394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1236	Open in IMG/M
3300005569\|Ga0066705_10586379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	686	Open in IMG/M
3300005587\|Ga0066654_10932105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300005764\|Ga0066903_104764386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	722	Open in IMG/M
3300005764\|Ga0066903_108893825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	509	Open in IMG/M
3300006032\|Ga0066696_10540460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	762	Open in IMG/M
3300006791\|Ga0066653_10419550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	684	Open in IMG/M
3300006797\|Ga0066659_11865303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella → Acidocella sp. MX-AZ02	510	Open in IMG/M
3300006846\|Ga0075430_101119543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300009012\|Ga0066710_103454796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	599	Open in IMG/M
3300009088\|Ga0099830_10188814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1607	Open in IMG/M
3300009090\|Ga0099827_11105957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	688	Open in IMG/M
3300009090\|Ga0099827_11164911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	670	Open in IMG/M
3300009143\|Ga0099792_10455481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	793	Open in IMG/M
3300009162\|Ga0075423_10273695	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1769	Open in IMG/M
3300009400\|Ga0116854_1098953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1239	Open in IMG/M
3300009789\|Ga0126307_11517119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300010036\|Ga0126305_11094051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	549	Open in IMG/M
3300010038\|Ga0126315_11044685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	549	Open in IMG/M
3300010039\|Ga0126309_10768249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	626	Open in IMG/M
3300010041\|Ga0126312_10721894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	720	Open in IMG/M
3300010166\|Ga0126306_11251113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	611	Open in IMG/M
3300010335\|Ga0134063_10500679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	608	Open in IMG/M
3300010335\|Ga0134063_10619712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300010371\|Ga0134125_11996632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300011269\|Ga0137392_11180966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	623	Open in IMG/M
3300011269\|Ga0137392_11323792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	579	Open in IMG/M
3300011271\|Ga0137393_11232097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	635	Open in IMG/M
3300012201\|Ga0137365_10885418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	652	Open in IMG/M
3300012201\|Ga0137365_10919202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300012204\|Ga0137374_11274330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	509	Open in IMG/M
3300012205\|Ga0137362_11239793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	630	Open in IMG/M
3300012206\|Ga0137380_11086844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	682	Open in IMG/M
3300012206\|Ga0137380_11221851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300012208\|Ga0137376_11267700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300012209\|Ga0137379_10645134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	965	Open in IMG/M
3300012209\|Ga0137379_11804726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300012212\|Ga0150985_102936843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	546	Open in IMG/M
3300012351\|Ga0137386_11186412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	535	Open in IMG/M
3300012355\|Ga0137369_10929324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300012357\|Ga0137384_11538413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300012359\|Ga0137385_11235673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	609	Open in IMG/M
3300012363\|Ga0137390_11418703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300012363\|Ga0137390_12031029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300012532\|Ga0137373_11052112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300012684\|Ga0136614_10604237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	781	Open in IMG/M
3300012927\|Ga0137416_11398586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	634	Open in IMG/M
3300012931\|Ga0153915_12914181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	558	Open in IMG/M
3300012975\|Ga0134110_10439204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300014167\|Ga0181528_10710351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	562	Open in IMG/M
3300016387\|Ga0182040_11468811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	578	Open in IMG/M
3300016404\|Ga0182037_11094092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	697	Open in IMG/M
3300017659\|Ga0134083_10487413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300017789\|Ga0136617_11192751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	572	Open in IMG/M
3300017988\|Ga0181520_10442910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	932	Open in IMG/M
3300018431\|Ga0066655_11453040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300018433\|Ga0066667_11513912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	594	Open in IMG/M
3300018433\|Ga0066667_12043134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300018465\|Ga0190269_10273271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	967	Open in IMG/M
3300018482\|Ga0066669_11391297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	636	Open in IMG/M
3300018482\|Ga0066669_12287617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300021086\|Ga0179596_10377271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	714	Open in IMG/M
3300025910\|Ga0207684_11601834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300025982\|Ga0208139_1037264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	557	Open in IMG/M
3300025987\|Ga0208906_1025556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300026332\|Ga0209803_1177373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	804	Open in IMG/M
3300026527\|Ga0209059_1021709	All Organisms → cellular organisms → Bacteria	2918	Open in IMG/M
3300026555\|Ga0179593_1175336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2033	Open in IMG/M
3300027903\|Ga0209488_10991509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300031548\|Ga0307408_100748103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	883	Open in IMG/M
3300031572\|Ga0318515_10629827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	569	Open in IMG/M
3300031573\|Ga0310915_10710076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	710	Open in IMG/M
3300031681\|Ga0318572_10753437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	579	Open in IMG/M
3300031736\|Ga0318501_10640999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	584	Open in IMG/M
3300031780\|Ga0318508_1190093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	587	Open in IMG/M
3300031845\|Ga0318511_10287447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	742	Open in IMG/M
3300031908\|Ga0310900_11452379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300031938\|Ga0308175_102435707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300031954\|Ga0306926_12482673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	569	Open in IMG/M
3300031959\|Ga0318530_10378621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300031981\|Ga0318531_10547916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	524	Open in IMG/M
3300032002\|Ga0307416_103121387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	554	Open in IMG/M
3300032055\|Ga0318575_10668771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300032160\|Ga0311301_12630286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	557	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.05%
Host-Associated	Host-Associated	4.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.11%
Aquatic	Environmental → Aquatic	5.94%
Plants	Host-Associated → Plants	4.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.11%
Freshwater	Environmental → Aquatic → Freshwater	5.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.20%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.97%
Ice	Environmental → Aquatic → Freshwater → Ice	1.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.99%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.99%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.98%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.98%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.98%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.99%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.99%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001380	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009400	Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025982	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_105 (SPAdes)	Environmental	Open in IMG/M
3300025987	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_203 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1356J14229_101466051	3300001380	Groundwater	MIYSIRGAHVLSPQQLYPLILNWTIALGRGGHSTATSSLAHLVTALLVGQSLRPSALMRALLSPNSAPARQRYKRVARSWHRRWLSPEWLTPLLVRAALALVKPDPSGSPIAGLTHLALDSVRCGGWEIFTLSVVWHGRGLPVGWAVLPYPWPKNRFTPTVCQMLQ
C688J35102_1179903041	3300002568	Soil	MLSSAELYPLVRAWLQAMGVAPHATALAALAHLVTTLLVGQSLRPSALMRALLSPSPVPARQRYKRVARAWTRRWLSPEGLTPCLVRAALALVAPDPAGSPTAGQTHLALDSVRCGPWEIFTVGVVWHGRLLPVGWAVLPYP
JGI25386J43895_101879651	3300002912	Grasslands Soil	MLSPQELYPLVLSWLRALDLCPHPAALVALTHLVVALLCGQSLRPSALMRALLSPTPVPARQRDKRVARFWERPWLTPAWLTPRLVRAALALVEPAPWGPTRGQVPVVLDSVRCGPWEVFTLGVVWHGRVLPVSWAALPYPWPKGQVTPTVC
Ga0063454_1002212641	3300004081	Soil	MPTPQEVYPVLLLWLQACAGPAHPTAGAALAHLVTALLVGQSLRPSALMRALVSPQPVPARQRYRRVARAWTRPWLSPAWLTPRLVQAARTLVPGERRLVLDSVRCGGWEVFTVGLLWHGRVLPVSWLALPYP
Ga0066672_105854141	3300005167	Soil	MLSPQELYPLVQLWVHALELAPSPAALSALTHLLVAVLCAQSLRPSALMRALLSPHVVPARQRYKRVARFWERPWLTPTWLTPRLVRAALALVEPAPWGPAGGQVLVVLDSVRCGPWEVFTLGVVWHGRMLPLSWAALPYPWPAGQVTPTVCRLLRQVGAVWPQGRPGHLLADRAFPSHKLFTTLRRLEWGWTVR
Ga0066680_107717892	3300005174	Soil	VPSASELYPLIEAWIQALPAATPMHATALVALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYTRVARAWTRPWLSPAWLVPRLVPAALALVPPDRDGVTHLALDSVRCG
Ga0066690_108889271	3300005177	Soil	MLSPQELYPLVLSWLRALDLCPHPAALVALTHLVVALLCGQSLRPSALMRALLSPVPVPARQRYKRVARFWERPWLTPAWLTPRLVRAALALVEPAPWGPTRRQVPVVLDSVRCGPWEVFTLGVVWHGRVLPVSWAALPYPWPKGQVTPTVCRL
Ga0066678_110953981	3300005181	Soil	VPSAPELYPLIEAWIQVLPAASPMHATALSALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAVLALVPADRDGLTHLALDSVRCGAWEVFTLGVVW
Ga0066675_105484061	3300005187	Soil	MRPRVAPPHELYPLVQLWVHALELAPSSAAMTALSHLLVALLTAQSLRPSALMRALLSPHAVPARQRYKRVARFWERPWLTPAWLTPRLVRAALALGKPDGWGPTAGLTHVVLDSVRCGSWEVFTLGVVWHGRVVPVSW
Ga0008090_151552211	3300005363	Tropical Rainforest Soil	VPSAPELYPLIEAWIQALPAATPMHATALSALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPAERDGGTHLALESVRCGAWEVFTLGVVWHGRVLPVGWA
Ga0070713_1022618151	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLSSPEVYPLVLAWLQALEVCPHAVALSALSHLVTALLVGQSLRASALMRALLSPLPVPARQRYKRVARALERPWLTPGWLTPRLVRATLALVDPDGWGPTCGQTHVVLDSVRCGGWEVFTLGVVWHGRVLP
Ga0066689_105652401	3300005447	Soil	VPSAPELYPLIEAWIQALPAATPMHATALSALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYTRVARAWTRPWLSPAWLVPRLVPAALALVPPDRDGVTHLALDSVRCGAWEVFTLGVVWHGRVLPVGWAVLPYPWPKG
Ga0070707_1022078261	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPSSQELYPLIHAWLQALPAPSATHLAALSALAHLVTALLVGQSLRPTALMRALLSPLPVPARQRYKRVARAWSRPWLSPAWLVPRLVPAALALVPPDRDGLTHLALDTVRCGPWEVFTLGVVWH
Ga0066700_107250991	3300005559	Soil	VPSASELYPLIEAWIQALPAATPMHATALVALAQLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPA
Ga0066670_108148111	3300005560	Soil	MLSSQELYPLVQLWVHALELAPSAAALSALSHLLVALLCGQSLRPSALMRALLSPKPVPARQRYKRVARFWEREWLTPAWLTPRLVRAALALVDPDGWGPTAGLTHVALDSVRCGPWEVFTLGVVWHGRVLPVSWAALPYPWPRGQVTPTVCRLLRQV
Ga0066699_100815122	3300005561	Soil	VPSAPELYPLIEAWIQALPAASPMHATALSALAHLVTALLVGQSLRPTALMRALSSPVPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLAL
Ga0066699_102563942	3300005561	Soil	VQLWVHALALAPSPAALSALTHLLVAVLCAQSLRPSALMRALLSPHVVPARQRYKRVARFWERPWLTPAWLTPRLVRAALALVEPAPWGPAGGQVLVVLDSVRCGPWEVFTLGVVWHGRMLPVSWAALPY
Ga0066705_105863791	3300005569	Soil	VPSAPELYPLIEAWIQALPAASPMHATALSALAHLVTALLVGQSLRPTALMRALSSPVPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHVALDSVRCGAWEVFTLGVVWHGRVLPVGW
Ga0066654_109321051	3300005587	Soil	MPTPQEVYPVLLLWLQACAGPAHPTAGAALAHLVTALLVGQSLRPSALMRALVSPQPVPARQRYRRVARAWTRPWLSPAWLTPRLVQAARTLVPGEKRLVLDSVRCGGWEVFTVGLLWHGRVLPLSWLALPYPWP
Ga0066903_1047643861	3300005764	Tropical Forest Soil	VPSCELYPLIQAWMQSLPAATPMHATALTALAHLVTALLVGQSLRPTALMRAWSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAVLALVPADRAGLTHLALDSVRCGA
Ga0066903_1088938251	3300005764	Tropical Forest Soil	MPTPQEVYPVLLLWLQACAGPAHPTAGAALAHLVTALLVGQSLRPSALMRALMSPQPVPARQRYRRVARAWTRPWLSPAWLTPRLVQAARTLVPGERRLVLDSVRCGGWEVFTVGLLWHGRVLPVSWLALPYPWPKGEFELAPV
Ga0066696_105404602	3300006032	Soil	VPSAPELYPFVEAWIQALPASTALHATALNALAHLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPKRDGVTHLALDSMRCGGWEVFTLGVVWHGRVLPVGWAVLPYPW
Ga0066653_104195501	3300006791	Soil	MLSPYELYPFVLLWMQALEVTPSSAAMTALTHLVVALLSGQSLRPAALMRALLSPTPVPARQRYKRLARFWERPWLTPAWLTPRLVRATLALVAPDGRGPTAGLTHVVLDSVRCGPWEIFTRGVVWHGRVVPLSWAALPYTW
Ga0066659_118653031	3300006797	Soil	VPSAPELYPLIEAWIQALPASTALHATALSALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPAERDGVTHLALDSVRCGGWEVFTLGVVWHGRVLPVGWAVLPYPW
Ga0075430_1011195432	3300006846	Populus Rhizosphere	MPAPAAVYPVVLLVIEALGGPPHAAARGALAQLVTALLRSQRLTASALMRVLASSVPVPARQRYKRVARALNRRWLTPAWLTPRLVRAALALTPDATPHLALDSVRCGRWEIFTVGVVWHGRVLPVAWAVLPYP
Ga0066710_1034547961	3300009012	Grasslands Soil	MPSASELYPLIEAWIQALPASTPMHATALRALAQLVTALLVGQSLRPTALMRALSSRLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPADRDGVTHLALDSVRC
Ga0099830_101888141	3300009088	Vadose Zone Soil	LPATTPLRSAALSGLAHLVTALLVGQSLRPSALMRALLSPSPVPARQRYKRVARAWSRPWLSPARLGPRLIPAVLALVASNPTIGPALG*
Ga0099827_111059572	3300009090	Vadose Zone Soil	VPSAPELYPFIEAWIQALPASTALHATALHALAHLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVP
Ga0099827_111649111	3300009090	Vadose Zone Soil	VPSSQELYPLIHAWLQALPALTATHPAALSALAHLVTALLVGQSLRPTALMRALLSPLPVPARQRYKRVARAWSRPWLSPAWLVPRLVPAALAVVPPDRDGLTHLALDTVRCGPWEVFTLGVVWHS
Ga0099792_104554811	3300009143	Vadose Zone Soil	VPSAPELYPLIEAWIQALPAASPMHATALSALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPAERDGVTHLALDSVRCGGWEVFTLGVVWHGRVLPVGWAVLPYPWPKGRFTPTVCALIR
Ga0075423_102736951	3300009162	Populus Rhizosphere	MPAPSDVYPLALVWLGALGAAPHRTALDALAHLVAALLAGQDLRAAGLMRALVSPPAVPARQRYKRVARAWERRWLTPAWLTPRLVGAALALVPADAAGETHLALDSVRCGRWEVFTVGVVWHGRVLP
Ga0116854_10989532	3300009400	Soil	LELYPLIEAWMQALPASIQMHAPALRALAHLVTALLVGQSLRTTTLMRALVSPLPLPARQRSKRVARAWRRPWLVPRLIPAVLALVPPERDGVT*
Ga0126307_115171191	3300009789	Serpentine Soil	MPTPQEVYPLLLPWVQALGGPTHPAAGLALAQLLSALLVTQSLRPSALMRALPSSQSVPARQRYQRVARAWTRAWLTAAWLTPRLVRAALALVPGRERLLALDSVRCGPWEVFTVGLVWHGRVLPLAWAVLAYPWPKGQFTPTVCALLETVARHLPPRDAESLAREAGAA
Ga0126305_110940511	3300010036	Serpentine Soil	MLSSMELYPLVRAWLQAMGVAPHATALAALAHLVTTLLVGQSLRPSALMRALLSPSPVPARQRYKRVARAWTRRWLSPEGLTPCLVRAALALVAPDPAGTPTAGQTHLALDRVRCGPWEIFTVGVVWHGRLLPVGWAVLPYPWPKGRFTPLVCALLRQVA
Ga0126315_110446851	3300010038	Serpentine Soil	MLTPQEVYPLLVVWLQACAGPAHRTAGAALAHLVTALLVGQSLRPSALMRALVSPQPVPARQRYRRVARAWTRAWLSPAWLTPRLVQAARTLVPGERRGVLDSVRCGGREGF
Ga0126309_107682492	3300010039	Serpentine Soil	VYPLLLPWVQALGGPAQPAGGLALAHLLSALLVSQSLRPSALMRAIPSAAAVPARQRYQRVARAWTREWLTAAWLTPRLVRAALALVPASERLLALDSVRCGPWEVFTVGLVWQGRVLPLAWAVLAYPWPKGQF
Ga0126312_107218942	3300010041	Serpentine Soil	VPSAPELYPLIEAWIQALPAATPMHATALRALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPD
Ga0126306_112511131	3300010166	Serpentine Soil	MLSPAEVYPLVQAWLQAMGAAPHPTAGAALAQLVTALLVGQSLRPSALMRALLSPNAVPARQRYKRVARAWDRRWLTPAWLTPRLVRAALTLVPADAAGETHLALDSVRCGPWEVFTVGVVWHGRVLPVGWA
Ga0134063_105006791	3300010335	Grasslands Soil	VYPVLRDWLQGCVGPGHRTAGAALAHLVTALLISHSLRPSDLMRALVSPQPVPASQRYRRVTRAWTRPWLSPAWLTPRLVQAARTLVPGEKRLVLDSVRCGGW
Ga0134063_106197121	3300010335	Grasslands Soil	MVPSRSGELFSGELYPFIEAWIQALPASTALHATALSALAHLVTALLVGQSLRPTALMRALSSPVPVPARQRYKRVARVWTRPWLSPAWLVPRLVPAALALVP
Ga0134125_119966321	3300010371	Terrestrial Soil	MLTLTEVYTLVLIWLQALEVPGEANALRALAHLVAALLSGQSLRPSALLRALLSPTPVPARQGYKRVARAWDRPWLTSAWLTPHLVRVVPALVAPEPRGPTKGLTHLALDSVRCGPWEVFVLGLVWHGRVLPLAWRVLAYPWPKGQVGPAVSALLEQVAACWPAERPVHLVADRGFPGQRLFR
Ga0137392_111809661	3300011269	Vadose Zone Soil	MLTPQEVYPVVQLWLQAFTGPCHRTAGAGLAHLVTALLVGQSLRPSALMRALVSPQPVPARQRYRRVARAWTRPWLSPAWLTPRLVRAARALVPGERLLVLDSVRCGRWEVFTVGLVWHGRVLPVSWAVLPYPWPKGQFTPTVCALLAQ
Ga0137392_113237921	3300011269	Vadose Zone Soil	MELYPLVLAWIQALPASTSTHSAALSALAHLVTALLVGHSLRLTALMRALSSPLPVPARQRYTRVARAWTRPWLSPAWLVPRLVPAALALVPPDRDGVTHLALDSVRCGAWEVF
Ga0137393_112320972	3300011271	Vadose Zone Soil	MLTPQEVYPVVQLWLQAFTGPCHRTAGAGLAHLVTALLVGQSLRPSALMRALVSPQPVPARQRYRRVARAWTRPWLSPAWLTPRLVRAARALVPGERLLVLDSVRCGRWEVFTVGLVW
Ga0137365_108854181	3300012201	Vadose Zone Soil	VPSAPELYPLIEAWIQALPAATPLHATALSALAHLVTALLVGQSLRPTALMRALSSPVPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAVLALVPAERDGVTHLALDSVRCGAWEVFTLGVVWHGRVLPVGWAVLPYPWPTGRFT
Ga0137365_109192021	3300012201	Vadose Zone Soil	MQALPAPMPIHPAALNALAHLVTALLVGQSLRPSALMRALLSPEPVPARQRYKRVARAWTRPWLSPAWLGPRLIPAVLALVPPDPPGCPSAGVTHLALDSVRCGAWEVFTI
Ga0137374_112743301	3300012204	Vadose Zone Soil	MELYPLVLAWLQALPAPTPIHPAALTALAHLVTALLVGQSLRPTALMRALLSPLPVPARQRSKRMARAWSRPWLSPAWLVPRLVPAALALVPPDRDGLTQVALDSVRCG
Ga0137362_112397931	3300012205	Vadose Zone Soil	MPSASELYPLIEAWIQALPAATPMHATALRALAQLVTALLVGQSLRPTALMRALSSRLPVPARQRYKRVARAWTRPWLSPAWLTPRLVPAALAL
Ga0137380_110868441	3300012206	Vadose Zone Soil	VPSAPELYPFIEAWIQALPASTALHATALHALAHLVTALLVGQSLRPTALMRAFSSPLPVPARQRYTRVARAWTRPWLSPAWLVPRLVPAALALVAPERSGVTHFALDSVRCGGWEVFTLGVVWHGRVLPVGWAVLPYPWPKGRFT
Ga0137380_112218511	3300012206	Vadose Zone Soil	VPSAPELYPLIEAWIQALPAATPMHATALSALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPAERDGVTHLALDSVRCGGWEVFTLGVVWHGRVLPVGWAVLPYPWPKGRFTP
Ga0137376_112677001	3300012208	Vadose Zone Soil	MLSPQEVYPLVQLWVHALELAPSSAALTALTHLLVALLTAQSLRPSALMRALLSPHAVPARQRYKRVARFWERPWLTPAWLTPRLVRAALALGEPDGWGPTAGLTHVVLDSVRCGSWEVFTLGVVWHGRVVPVSWAVLAYPWPHGQVTPTVCRLLRQVAATWP
Ga0137379_106451342	3300012209	Vadose Zone Soil	VPSAPELYPFIEAWIQALPASTALHATALHALAHLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALA
Ga0137379_118047261	3300012209	Vadose Zone Soil	VPSAPELYPLIEAWIQALPAATPAHPAALSALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLTPRLVPAALALVPADRAGLTHLALDSVRCGPWE
Ga0150985_1029368431	3300012212	Avena Fatua Rhizosphere	VYPVVLVWLQACVGPSHQTAGAALAHLVTALLIGQSLRPSAMMRALVSPQPVPARQCYRRVARAWTRPWLSPAWLTPRLVQAARTLVPGERRLVLDSVRCGGWEVFTVGLLWHGRVLP
Ga0137386_111864122	3300012351	Vadose Zone Soil	VPSAPELYPLIEAWIQALPAATPAHPAALSALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPADRDGVTHLALDSVRCG
Ga0137369_109293241	3300012355	Vadose Zone Soil	MEASPMLAAADLYPLVVDWLRSVFAVAPPPSAAQSALAHLVTAVLLSQRLRPSALMRALLSPVPVPARQRYKRLARAWTRPWLAPAALTPHLVRAVLAVVRPDADGRTHLALDSVRCGRWEVFTLGVLWHGRALLVGWAVLPYPWP
Ga0137384_115384132	3300012357	Vadose Zone Soil	VPSAPELYPLIEAWIQALPAATPMHATALSALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPAERDGVTHLALDSVRCGAW
Ga0137385_112356731	3300012359	Vadose Zone Soil	VPSAPELYPLIEAWMQALPAATPAHPAALSALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGLTHLALDSVRCGGWEVFTLGVVWHGR
Ga0137390_114187031	3300012363	Vadose Zone Soil	MELYPLVLAWIQALPASTSTHSAALSALAHLVTALLVGHSLRLTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPTQRDGLTHLALDSVRCGGWEVFTLGVVWHGRVLLVGWAVLPYPWPKGRFTPTVC
Ga0137390_120310291	3300012363	Vadose Zone Soil	MQALPASTPLHATALSALAHLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALAL
Ga0137373_110521121	3300012532	Vadose Zone Soil	MPSSVDLYPLVLDWLRALFAVTPPPDAAQRALAHLVTAVLLSQRLRPSALMRALLSPVPVPARQRYKRVARAWTRPWLSPAALTPHLVRAVLAVVHPGADGLTHLALDTVRCGRWEIFRLGVVWHGRVLVVGWAVLPYPWP
Ga0136614_106042372	3300012684	Polar Desert Sand	MLPPTELYPLVLLWLQALGVPRAASAATLADLVTALLIGQSPRPSAVMRALLSPEPVPARQRYKRVARAWGRRWLSSAWLTPCLVRAALALVGPDPAGRPTAGLTHLALDSVRCGRWEVLVVGVVWHGRVVPVGWAVLPY
Ga0137416_113985861	3300012927	Vadose Zone Soil	VPSAPELYPLIEAWIQALPAASPMHATALSALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPCRSPAWLVPRLVPAALALVPPERDGVTHLALDSVRCGGWEVFTLGVVWHGRVLPVGWTVLPYPWPTGRFTPTVCALIRQVA
Ga0153915_129141811	3300012931	Freshwater Wetlands	MSSPQEFYALVLLWVQGLDGLGHATALASLAHLVTALLVGQSLRPTALMRALLSPSPVPARQRYKRVERAWTRRWLSPAWLTPRLVRAALALVSPDALDSPTAGLTHLALDSVRCGAGEI
Ga0134110_104392041	3300012975	Grasslands Soil	LIEAWIQALPASTALHATALSALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPSERDGVTHVALDSVRCGAWEVFTLGVVWHGR
Ga0181528_107103511	3300014167	Bog	MLTLTELYPLVLTWLQALEVPGDANAVRALAHLVTALLTGQSLRPSALMRALLSPAAVPARQRYKRVARAWDRPWLSSGWLTPLLVRAALILVPPERKGVLAGMHHVALDSVRCGPWEVFTLGLVWHGRVLPLAWRVLAYPWPPGQVT
Ga0182040_114688111	3300016387	Soil	VPCAPELYPLIEAWIQALPASTPMHATALSALAQLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDSVRC
Ga0182037_110940922	3300016404	Soil	VPSAPELYPLIEAWIQALPASTPMHATALSALAQLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPP
Ga0134083_104874131	3300017659	Grasslands Soil	VPSAPELYPLIEAWIQALPAASPMHATALSALAHLVTALLVGQSLRPTVLMRALSSPVPVPARQRYKRVARAWTRPWLSPAWLVPRLVPTALALVPAERDGVTHLALDSVRC
Ga0136617_111927511	3300017789	Polar Desert Sand	MPSPSGLYPVVLLWLQALGVTGHPTARAALGQLVTALLVGQSLRSTALMRALLSPEPVPARQRYKRVARAWGRRWLSSAWLTPCLVRAALALVGPDPAGRPTAGLTHLALDSVRCGPWEVFTLGVAWHGRVLVVGWEVLAYPWPPGRFTPAVCALLERVAAA
Ga0181520_104429101	3300017988	Bog	MLTLSELYPLVLTWLQALGVPADANALRALARLVAALLSSQSLRPSALMRAQLSPTPVPARQGYKRVARAWDRPWLTSRWLTPLLVRAAAALVPAERAGPTAGLTHLALDSVRCGPWEVFMLGVVWHGRVLPLAWRVVGYPWPKGQVTPAVLALLEQVAADW
Ga0066655_114530401	3300018431	Grasslands Soil	VLSAPELDPFIEAWIQALPASTALHATALSALAHLVTALLVGQSLRPTALMRAFSSPLPVPARQRSKRVARAWTRPWRSPAWLVPRLVPAARALVPAERDGDTHRAPHRH
Ga0066667_115139121	3300018433	Grasslands Soil	VPSAPELYPLIEAWIQALPASTALHATALSALAHLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDSVRCGGWEVFTLGVVWHGRVLP
Ga0066667_120431341	3300018433	Grasslands Soil	MLSPAELYPLVLAWLQALELAGHPLAVSALAQLVTALLVGQSLRPGALMRAVLSPTAVPARQRYKRVRRLLGRRWLAPAWLTPRLVRAVLALVPPERDGRTHLALDSVRCGPWEVFTLGVAWHGRALPVGWAVLPYPWPK
Ga0190269_102732712	3300018465	Soil	MLSSSELYPLVLQWLQVLEIVPHVTAQAALAHLVTALLVGQSLRPSALMRALLSPEAVPARQRYTRVRRAWTRRWLTPAWLTPRLVPAVLVLVGPDPPGRPTAGWTHLVLDSVRCGGWEVFTVGVVWHGRVLPVGWAVLPYPWPKGQFTPTVC
Ga0066669_113912971	3300018482	Grasslands Soil	MLSPHALYPLVQLWVHALGLAPSSAALSALSHLLVAVLSGQSLRPSALMRALLSPVPVPARQRYKRVARFWEREGLTPAWLTPRLVRAALALVEPAPWGPSGGQVLVALDSVRCGPWGVFTLGVVWHGRILPVSWAALPYPWPQGQVTTTVCRLLRQVGAVWPAGRPCHLQAGRAIPDI
Ga0066669_122876172	3300018482	Grasslands Soil	VPSAPELYPLIEAWIQALPAASPMHATALSALAHLVTALLVGQSLRPTALMRALSSPVPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALAL
Ga0066669_123651001	3300018482	Grasslands Soil	MPTPQEVYPVLRDWLQGCVGPGHRTAGAALAHLVTALLISQSLRPSALMRALVSPQPVPARQRYRRVTRAWTRPWLSPAWLTPRLVQAARTLVPGEKRL
Ga0179596_103772712	3300021086	Vadose Zone Soil	VPSAPELYPFIEAWIQALPASTALHATALHALAHLVTALLVGQSLRPTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDSVRCGGWEVFTLGVVWHGRVLPVG
Ga0207684_116018341	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VPSAPELYPLIEAWIQALPAATPMHATALSALAHLVTALLVGHSLRQTALMRALSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPDRDGVTHLALDSVRCGAWEVFTLGVVWHGRVLPVGWAVLPYPWPK
Ga0208139_10372641	3300025982	Rice Paddy Soil	MSSPQELYPLVLLWVQGIDGLGHATALASLAHLVTALLVGQSLRPTALMRALLSSSPVPARQRYKRVERAWTRRWLSPAWLTPRLVRAALALVASDALGRPSAGLTHLALDSVRCGRWEIFTLGVVWHGRTLPVGCAVLPYPW
Ga0208906_10255561	3300025987	Rice Paddy Soil	MSSPQELYPLVLLWVQGIDGLGHATALASLAHLVTALLVGQSLRPTALMRALLSSSPVPARQRYKRVERAWTRRWLSPAWLTPRLVRAALALVASDALGRPSAGLTHLALDSVRCGRWEIFTLGVVWHGR
Ga0209803_11773732	3300026332	Soil	VPSAPELYPLIEAWIQALPASTALHATALSALAHLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPAERDGVTHLALDSVRCGGWEVFTLGVVWHGRVLPVGWAVLPYPWPKGRFTPTVCAL
Ga0209059_10217094	3300026527	Soil	LRTRRILVPSAPELYPLIEAWIQALPAASPMHATALSALAHLVTALLVGQSLRPTALMRALSSPVPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPAERDGVTHLALDSVRCGAWEVFTLGVVWCVRRAKLTGRFGAK
Ga0179593_11753364	3300026555	Vadose Zone Soil	VPSSTELYPLVQAWIQALPATTPPRATAVRGLAQLVTALLVGQSLRPSALMRALLSPSPVPARQRYKRVARAWSRPWLSPAWLGPRLIPAVLALITSDPTDRPTAGVTHLALDSVRCGAWEVF
Ga0209488_109915091	3300027903	Vadose Zone Soil	VPSAPELYPFIEAWIQALPASTALHATALHALAHLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDSVRRGGWEVFTL
Ga0307408_1007481031	3300031548	Rhizosphere	MPSSAELYPLVHAWVQALPAPTPLHPAALSALAHLVTALLVGQSLRSTALMRALLSPSPVPARQRYKRVARAWTRPWLSPAWLGPRLVPAVLSLVAPDPDGLTHLALDSVRCGRWEVFTLGVVWHGRVLPVGWAVLPYPWPKGCFTPTVCA
Ga0318515_106298272	3300031572	Soil	VPSAPELYPLIETWIQALPASTPMHATALSALAQLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDSVRCGAWEVFT
Ga0310915_107100761	3300031573	Soil	VPSAPELYPLIEAWMQALPASSPLHATALSALAQLVTALLVGQSLRPTALMRAFLSPLPVPARQRSKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDS
Ga0318572_107534371	3300031681	Soil	VPSAPELYPLIEAWIQALPASTPMHATALSALAQLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDSVRCGAWEVFTLGVVWHGRVLPVGWAVLPYPW
Ga0318501_106409992	3300031736	Soil	VPSAPELYPLIEAWIQALPASTPMHATALSALAQLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDSVRCGAWEVFTLGVVWH
Ga0318508_11900931	3300031780	Soil	VPSAPELYPLIEAWIQALPASTPMHATALSALAQLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDSVRCGAWEVFTLGVVWHGRVLPVGWAVLP
Ga0318511_102874472	3300031845	Soil	VPSAPELYPLIEAWIQALPASTPMHATALSALAQLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDSVRCGAWEVFTLGVVWHGRVLPVGWAVLPYPWPKGQFTPT
Ga0310900_114523791	3300031908	Soil	MLAPRELYPLVLAWLQALGVASHRTALPALAHLLTGLLAAQSLRPAALMRALLSPAPVPARQRYKRVARAWTRPWLSPAAVTPPLVRAVLALVPPDGAGVTHLALDSVRCGRWEVLTLGVLWRGRALVVGWA
Ga0308175_1024357071	3300031938	Soil	MLTPTEVYPLVLTWLQALGLPGDANALRALARLVDAVLAGQSLRPSALMRALLSPTVVPARQAYKRVARAWARPWLTSALLTPLLVRAALVLVPPEREGPHRGLTYLALDSVRCGPWEVFVLGVVWHGRVLPLAWRILAYPWPKGQVGPAVSALLEH
Ga0306926_124826731	3300031954	Soil	VPSAPELYPLIEAWMQALPASSPLHATALSALAQLVTALLVGQSLRPTALMRAFLSPLPVPARQRSKRVARAWTRPWLSPAWLVPRLVPAALALVPPDRDGVTHLALDSVRCGAWEVFTLGVVWHGRVLP
Ga0318530_103786212	3300031959	Soil	VPSAPELYPLIEAWIQALPASTPMHATALSALAQLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDSVRCGAWEVFTLGVVWHGRVLP
Ga0318531_105479161	3300031981	Soil	VPSAPELYPLIEAWIQALPASTPMHATALSALAQLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPE
Ga0307416_1031213871	3300032002	Rhizosphere	MPSSAELYPLVSAWVQALPAPAALHPAALSALAHLVTALLVGQSLRSTALMRALLSPSPVPARQRYKRVARAWFRPWLSPAWLGPRLVPAVLSLVVPDPDGLTHLALDSVRCGRWEVFTLGVVWHGRVLPVGWAVLPYPWPKG
Ga0318575_106687711	3300032055	Soil	VPSAPELYPLIEAWIQALPASTPMHATALSALAQLVTALLVGQSLRPTALMRAFSSPLPVPARQRYKRVARAWTRPWLSPAWLVPRLVPAALALVPPERDGVTHLALDSVRCGAWEVFTLGVVWHGRVLPVGWVVLPYPWPKGQF
Ga0311301_126302861	3300032160	Peatlands Soil	MLTLSELYPLALTWLQALGVPGDANALRALAHLVAALLTGQSLRPSALMRAQLSPTPVPARQGYKRVARAWDRPWLTSRGLTPLLVRAAAALVPAERGGPTAGLTHLALDSVRCGPWEVFVLGVVWHGRVLPLAWRVLAYPWPTGQVTPAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F104089

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences