Metagenome Family F103256

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103256
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	48 residues
Representative Sequence	MEYKKGQLDEILFLVKKGFSYGDILTMPVYLRRYYVDYIIELENK
Number of Associated Samples	78
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.00 %
% of genes near scaffold ends (potentially truncated)	48.51 %
% of genes from short scaffolds (< 2000 bps)	70.30 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.426 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (11.881 % of family members)
Environment Ontology (ENVO)	Unclassified (43.564 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (66.337 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.21% β-sheet: 0.00% Coil/Unstructured: 54.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF06841	Phage_T4_gp19	4.95
PF03796	DnaB_C	1.98
PF00176	SNF2-rel_dom	1.98
PF04965	GPW_gp25	0.99
PF07282	OrfB_Zn_ribbon	0.99
PF04984	Phage_sheath_1	0.99
PF02086	MethyltransfD12	0.99
PF13482	RNase_H_2	0.99
PF03420	Peptidase_S77	0.99
PF02739	5_3_exonuc_N	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	1.98
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	1.98
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.99
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	0.99
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	0.99
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.36 %
Unclassified	root	N/A	35.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.43 %
Unclassified	root	N/A	35.64 %
Viruses	superkingdom	All Organisms → Viruses	6.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.43 %
Unclassified	root	N/A	35.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.96 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.98 %
Varidnaviria	clade	All Organisms → Viruses → Varidnaviria	0.99 %

Name	Rank	Taxonomy	Distribution
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	57.43 %
Unclassified	root	N/A	35.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.96 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.98 %
Bamfordvirae	kingdom	All Organisms → Viruses → Varidnaviria → Bamfordvirae	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	57.43 %
Unclassified	root	N/A	35.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.96 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.98 %
Nucleocytoviricota	phylum	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota	0.99 %

Name	Rank	Taxonomy	Distribution
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	57.43 %
Unclassified	root	N/A	35.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.96 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.98 %
Megaviricetes	class	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	0.99 %

Name	Rank	Taxonomy	Distribution
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	57.43 %
Unclassified	root	N/A	35.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.96 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.98 %
Imitervirales	order	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Imitervirales	0.99 %

Name	Rank	Taxonomy	Distribution
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	57.43 %
Unclassified	root	N/A	35.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.96 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.98 %
Mimiviridae	family	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Imitervirales → Mimiviridae	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000032\|Draft_c0419451	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	601	Open in IMG/M
3300001213\|JGIcombinedJ13530_107057285	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2846	Open in IMG/M
3300001213\|JGIcombinedJ13530_107603748	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	913	Open in IMG/M
3300001765\|MIS_1001106	Not Available	62208	Open in IMG/M
3300001851\|RCM31_10376449	Not Available	560	Open in IMG/M
3300002220\|MLSBCLC_10460236	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1188	Open in IMG/M
3300002371\|B570J29602_1006557	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	681	Open in IMG/M
3300002408\|B570J29032_109512134	Not Available	825	Open in IMG/M
3300002408\|B570J29032_109686361	Not Available	1056	Open in IMG/M
3300002835\|B570J40625_100000708	Not Available	58074	Open in IMG/M
3300002835\|B570J40625_100134900	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2878	Open in IMG/M
3300002835\|B570J40625_100709481	Not Available	899	Open in IMG/M
3300003429\|JGI25914J50564_10138218	Not Available	589	Open in IMG/M
3300003820\|Ga0007863_1008131	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1037	Open in IMG/M
3300004126\|Ga0066179_10052786	Not Available	951	Open in IMG/M
3300004240\|Ga0007787_10002422	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	6746	Open in IMG/M
3300004481\|Ga0069718_13703106	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	692	Open in IMG/M
3300005527\|Ga0068876_10000013	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Imitervirales → Mimiviridae	155713	Open in IMG/M
3300005662\|Ga0078894_10023627	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	5006	Open in IMG/M
3300005662\|Ga0078894_10224810	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1700	Open in IMG/M
3300005662\|Ga0078894_11513849	Not Available	556	Open in IMG/M
3300005935\|Ga0075125_10359591	Not Available	567	Open in IMG/M
3300006065\|Ga0081425_131042	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	136948	Open in IMG/M
3300006484\|Ga0070744_10006570	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3487	Open in IMG/M
3300006484\|Ga0070744_10209976	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	553	Open in IMG/M
3300007603\|Ga0102921_1221516	Not Available	679	Open in IMG/M
3300007617\|Ga0102897_1223191	Not Available	561	Open in IMG/M
3300008107\|Ga0114340_1000587	Not Available	50235	Open in IMG/M
3300008107\|Ga0114340_1041196	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2064	Open in IMG/M
3300008107\|Ga0114340_1113169	All Organisms → Viruses → Predicted Viral	1063	Open in IMG/M
3300008110\|Ga0114343_1071843	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1268	Open in IMG/M
3300008113\|Ga0114346_1177351	Not Available	878	Open in IMG/M
3300008113\|Ga0114346_1178300	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	874	Open in IMG/M
3300008267\|Ga0114364_1017453	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3064	Open in IMG/M
3300008267\|Ga0114364_1084087	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1033	Open in IMG/M
3300008950\|Ga0102891_1165060	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	652	Open in IMG/M
3300009026\|Ga0102829_1045906	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1304	Open in IMG/M
3300009151\|Ga0114962_10013389	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	5971	Open in IMG/M
3300009152\|Ga0114980_10151758	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1373	Open in IMG/M
3300009159\|Ga0114978_10106663	All Organisms → Viruses → Predicted Viral	1844	Open in IMG/M
3300009693\|Ga0116141_10239533	Not Available	982	Open in IMG/M
3300010157\|Ga0114964_10612602	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	511	Open in IMG/M
3300010885\|Ga0133913_12370251	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1300	Open in IMG/M
3300010885\|Ga0133913_12370252	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1300	Open in IMG/M
3300012012\|Ga0153799_1059050	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	699	Open in IMG/M
(restricted) 3300013123\|Ga0172368_10518025	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	517	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10021311	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	4600	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10855195	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	510	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10042913	Not Available	3305	Open in IMG/M
3300013372\|Ga0177922_10439404	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	592	Open in IMG/M
3300013372\|Ga0177922_11061070	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	792	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10535680	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	650	Open in IMG/M
3300017754\|Ga0181344_1120852	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	755	Open in IMG/M
3300020074\|Ga0194113_10003261	Not Available	21828	Open in IMG/M
3300020141\|Ga0211732_1538039	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	698	Open in IMG/M
3300020151\|Ga0211736_10176022	All Organisms → Viruses → Predicted Viral	2135	Open in IMG/M
3300020159\|Ga0211734_10426874	Not Available	524	Open in IMG/M
3300020159\|Ga0211734_10706139	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1571	Open in IMG/M
3300020159\|Ga0211734_10706488	Not Available	990	Open in IMG/M
3300020160\|Ga0211733_10023584	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	13152	Open in IMG/M
3300020160\|Ga0211733_10944732	Not Available	692	Open in IMG/M
3300020161\|Ga0211726_11038057	Not Available	594	Open in IMG/M
3300020172\|Ga0211729_10187877	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1240	Open in IMG/M
3300020183\|Ga0194115_10417953	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	571	Open in IMG/M
3300020198\|Ga0194120_10047975	All Organisms → Viruses → Predicted Viral	3439	Open in IMG/M
3300020214\|Ga0194132_10605157	Not Available	525	Open in IMG/M
3300020527\|Ga0208232_1008671	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1606	Open in IMG/M
3300020527\|Ga0208232_1024561	Not Available	845	Open in IMG/M
3300020722\|Ga0214245_1063322	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	500	Open in IMG/M
3300021961\|Ga0222714_10000069	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	120740	Open in IMG/M
3300021962\|Ga0222713_10311577	Not Available	998	Open in IMG/M
3300023184\|Ga0214919_10013998	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	9638	Open in IMG/M
3300024346\|Ga0244775_10218450	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1595	Open in IMG/M
3300024348\|Ga0244776_10001818	Not Available	22211	Open in IMG/M
3300025389\|Ga0208257_1005830	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2259	Open in IMG/M
3300027212\|Ga0208554_1029814	Not Available	881	Open in IMG/M
3300027281\|Ga0208440_1060144	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	818	Open in IMG/M
3300027593\|Ga0255118_1086984	Not Available	504	Open in IMG/M
3300027608\|Ga0208974_1062049	Not Available	1051	Open in IMG/M
3300027749\|Ga0209084_1000079	Not Available	94382	Open in IMG/M
3300027782\|Ga0209500_10426474	Not Available	527	Open in IMG/M
3300027798\|Ga0209353_10194843	Not Available	890	Open in IMG/M
3300027896\|Ga0209777_10144686	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1966	Open in IMG/M
3300027896\|Ga0209777_10591458	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	805	Open in IMG/M
3300028027\|Ga0247722_10002957	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	8584	Open in IMG/M
3300031707\|Ga0315291_10847737	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	789	Open in IMG/M
3300031746\|Ga0315293_10111022	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2318	Open in IMG/M
3300031746\|Ga0315293_10348780	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1176	Open in IMG/M
3300031772\|Ga0315288_10763058	Not Available	900	Open in IMG/M
3300031772\|Ga0315288_10775434	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	890	Open in IMG/M
3300031786\|Ga0315908_10575208	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	937	Open in IMG/M
3300031857\|Ga0315909_10108872	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2370	Open in IMG/M
3300032046\|Ga0315289_11450251	Not Available	528	Open in IMG/M
3300032053\|Ga0315284_10739512	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1148	Open in IMG/M
3300032164\|Ga0315283_11133947	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	820	Open in IMG/M
3300033418\|Ga0316625_100018334	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2720	Open in IMG/M
3300034018\|Ga0334985_0443858	Not Available	764	Open in IMG/M
3300034061\|Ga0334987_0009420	Not Available	9159	Open in IMG/M
3300034082\|Ga0335020_0219546	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	947	Open in IMG/M
3300034082\|Ga0335020_0626741	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	501	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.03%
Engineered	Engineered	2.97%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.05%
Terrestrial	Environmental → Terrestrial	1.98%
Wastewater	Engineered → Wastewater	1.98%
Lab Enrichment	Engineered → Lab Enrichment	0.99%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	79.21%
Marine	Environmental → Aquatic → Marine	13.86%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.99%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.99%
Soil	Environmental → Terrestrial → Soil	0.99%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.99%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.99%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.99%
Defined Media	Engineered → Lab Enrichment → Defined Media	0.99%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	49.50%
Lentic	Environmental → Aquatic → Freshwater → Lentic	23.76%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.98%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.99%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.99%
River	Environmental → Aquatic → Freshwater → River	0.99%
Near-Boiling (>90C)	Environmental → Aquatic → Thermal Springs → Near-Boiling (>90C)	0.99%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.99%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.99%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	0.99%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	38.61%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	13.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	10.89%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.93%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.95%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.98%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.99%
Alkaline	Environmental → Aquatic → Thermal Springs → Near-Boiling (>90C) → Alkaline	0.99%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.99%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.99%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	0.99%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	11.88%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	10.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	8.91%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	7.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.92%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.93%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.93%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	6.93%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	3.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.96%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.97%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.98%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.98%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.99%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.99%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.99%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.99%
Sinkhole Freshwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Sinkhole Freshwater	0.99%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.99%
Hotspring	Environmental → Aquatic → Thermal Springs → Near-Boiling (>90C) → Alkaline → Hotspring	0.99%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.99%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.99%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.99%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	0.99%
Hydrocarbon Resource Environments	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000032	Oil sands microbial community from Northern Alberta which degrade Naphthaline	Engineered	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001765	Sinkhole freshwater microbial communities from Lake Huron, USA - combined 2007-2012	Environmental	Open in IMG/M
3300001851	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM31, ROCA_DNA206_0.2um_MCP-S_C_3b	Environmental	Open in IMG/M
3300002220	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011	Engineered	Open in IMG/M
3300002371	Freshwater microbial communities from Lake Mendota, WI - 09NOV2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300003820	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07	Environmental	Open in IMG/M
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005935	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKN	Environmental	Open in IMG/M
3300006065	Hotspring Microbial Communities from Lower Geyser Basin, Spring Unknown 43 (Mound Spring), Yellowstone National Park, Wyoming, USA ? Sample 3, Mini-Metagenomics	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009693	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG	Engineered	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300013123 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11m	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013129 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cm	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300020198	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65m	Environmental	Open in IMG/M
3300020214	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015054 Kigoma Offshore 80m	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020722	Freshwater microbial communities from Trout Bog Lake, WI - 23OCT2008 hypolimnion	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300027212	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02 (SPAdes)	Environmental	Open in IMG/M
3300027281	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02 (SPAdes)	Environmental	Open in IMG/M
3300027593	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepB_8h	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028027	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FC	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Draft_04194512	3300000032	Hydrocarbon Resource Environments	LKLVSGSNFFALSTDYNKGQLDEILYLIKKGFSYKDILTMPVYLRRYFVGYLLELEKQN*
JGIcombinedJ13530_1070572852	3300001213	Wetland	MEYREGQLKEILFLIREGFSYNDVLSMPVYIRKYYIDYIIEMKNK*
JGIcombinedJ13530_1076037482	3300001213	Wetland	MDYKRTQLKELLFLVKRGFSYSDVISMPVYIRRYYIQYIAEAEKE*
MIS_100110625	3300001765	Sinkhole Freshwater	MDYKKGQLDEILFMVKRGFSYSDVLMMPIHTRRYYVQYMIELENK*
RCM31_103764492	3300001851	Marine Plankton	NFFALSTEYKKAQLDEILFMVKNGFSYGDILNMPVYLRRYYINFILEAQKT*
MLSBCLC_104602362	3300002220	Hydrocarbon Resource Environments	MDYKKGQLDEILYLIKRGFSYSETLTMPVYLRRYFVQYLIELENSK*
B570J29602_10065572	3300002371	Freshwater	MEYRKTQLDEFLYLIKKGXNYSELLTMPIYLRRYYVNYIIEIENKQ*
B570J29032_1095121341	3300002408	Freshwater	ELGLGLTFFALSTEYKKNQLSEIHYLIRKGFSYGDILTMPVYIRRYYIGYIMELENTQ*
B570J29032_1096863611	3300002408	Freshwater	FFVLSTDYKKGQLDEFLFLIKRGFTYGDILTMPVWERRYYVNYLVELENKK*
B570J40625_1000007085	3300002835	Freshwater	MEYRKTQLDEFLYLIKKGFNYSELLTMPIYLRRYYVNYIIEIENKQ*
B570J40625_1000309421	3300002835	Freshwater	PRQETQSKLKLDSGLSFFVLSTDYKKGQLDEFLFLIKRGFTYGDILTMPVWERRYYVNYLVELENKK*
B570J40625_1001349002	3300002835	Freshwater	MDYKKGQLDEILFLIKKGFSYGDLLTMPVHLRRYYVNYIIELENNTQ*
B570J40625_1007094811	3300002835	Freshwater	DYKKGQLDEILYLVKRGFSYGDILSMPIYIRRYYINYMMELENNTQ*
JGI25914J50564_101382182	3300003429	Freshwater Lake	FFVLSTDYKKGQLDEFLFLIKRGFTYGDILTMPVWERRYYVNYLIELENKK*
Ga0007863_10081312	3300003820	Freshwater	MDYKKIQLDEILFLVKKGFSYGDILTMPVYLRRYYVEYIIELENKQS*
Ga0066179_100527862	3300004126	Freshwater Lake	DYKKGQLDEFLFLIKRGFTYGDILTMPVWERRYYVNYLIELENKK*
Ga0007787_100024224	3300004240	Freshwater Lake	MLKSASGWSFFVLSMDYKKGQLDEILFLIKKGFSYGDILTMPIFIRRYYVEYILELENSPK*
Ga0069718_137031062	3300004481	Sediment	MSQLKEILFLVKRGFSYSDLLSMPVYIRRYYIQYIQELENQPKN*
Ga0068876_100000134	3300005527	Freshwater Lake	MAYKKGQLDEILFLIKRGFSYGDIITMPVFIRRYYVEYIIELENTPK*
Ga0078894_100236271	3300005662	Freshwater Lake	ASGWSFFVLSMDYKKGQLDEILFLIKKGFSYGDILTMPIFIRRYYVEYILELENSPK*
Ga0078894_102248102	3300005662	Freshwater Lake	FFVLSTDYKKGQLDEILFLVKKGFSYGDILTMPVYLRKYYVGYIIELENAK*
Ga0078894_115138491	3300005662	Freshwater Lake	ASGWSFFVLSMDYKKGQLDEILFLIKKGFSYGDILTMPIFVRRYYVEYILELENSPK*
Ga0075125_103595911	3300005935	Saline Lake	GWNFFALSTEYRKGQLDEILFLVKRGFSYSDIISMPIYIRRYYVEYIHELETAN*
Ga0081425_13104223	3300006065	Hotspring	MEYKKGQLDEILFLIKRGFSYGDIMSMPVYERRYFVQYIIELENSK*
Ga0070744_100065702	3300006484	Estuarine	MEYKKGQLDEILFLVKKGFSYGDILTMPVYLRRYYVDYIIELENKTT*
Ga0070744_102099762	3300006484	Estuarine	MEYRKTQLDEFLFLIKKGFNYSELLTMPIYLRRYYVNYIIEIENKQ*
Ga0102921_12215162	3300007603	Estuarine	MEYKKGQLDEILFLIKKGFSYGDLLTMPVHLRRYYVNYIIELENNTQ*
Ga0102897_12231911	3300007617	Estuarine	KGQLDEFLFLIKRGFTYGDILTMPIWERRYYVNYLIELENKQ*
Ga0114340_100058725	3300008107	Freshwater, Plankton	MDYKKGQLDEILFLIKKGFTYGDILTMPVFIRRYYVGYILEMENTPK*
Ga0114340_10411962	3300008107	Freshwater, Plankton	GWSFFVLSMDYKKGQLDEILFLIKKGFSYGDILTMPIFIRRYYVEYILELENSPK*
Ga0114340_11131691	3300008107	Freshwater, Plankton	SKGQLDEILYLVKRGFSYRDILLMPIYIRRYYINYMIEVENTPK*
Ga0114343_10718432	3300008110	Freshwater, Plankton	MDYKKGQLDEILFLIKKGFSYGDILTMPIFIRRYYVEYILELENSPK*
Ga0114346_11773512	3300008113	Freshwater, Plankton	QLDEILFLIKKGFSYGDILTMPIFIRRYYVEYILELENSPK*
Ga0114346_11783002	3300008113	Freshwater, Plankton	MDYKKGQLDEILFLIKKGFSYGDILTMPIFIRRYYVEYILELE
Ga0114364_10174532	3300008267	Freshwater, Plankton	MAYKKGQLDEILFLIKRGFSYGDIITMPVFIRRYYVEYIIELENAPK*
Ga0114364_10840872	3300008267	Freshwater, Plankton	MEYKKGQLDEILFLIKKGFSYGDVLTMPIFIRRYYVEYIIELENTPK*
Ga0102891_11650602	3300008950	Estuarine	MEYKKGQLDEILFLVKKGFSYGDILTMPVYLRRYYVDYIIELENK
Ga0102829_10459062	3300009026	Estuarine	NQLTEILFLVKRGFSYGDIMSMPVYVRKYFISFMMELENSN*
Ga0114962_100133893	3300009151	Freshwater Lake	MDYKKGQLDEILFLVKRGFSYGDILSMPVYIRRYYINYMIEKETENN*
Ga0114980_101517582	3300009152	Freshwater Lake	MEYKKGQLDEILFLVKKGFSYGDILTMPIYLRRYYVDYIIELENTKT*
Ga0114978_101066632	3300009159	Freshwater Lake	FFVLSTDYKKGQLDEFLFLIKRGFTYGDILTMPVWERRYYVNYLIELENKQ*
Ga0116141_102395332	3300009693	Anaerobic Digestor Sludge	KLDLGSNFFALSTDYRTGQLKEILFLIKRGFTYSDVLSMPIHVRRFYIQYISEIETQK*
Ga0114964_106126021	3300010157	Freshwater Lake	MEYKKGQLDEILFLVKKGFSYGDILTMPVYLRRYY
Ga0133913_123702512	3300010885	Freshwater Lake	LGLTFFALSTDYKKNQLDEILYLITKGFTYGDVLTMPIFVRRYYINFLIEKQTENS*
Ga0133913_123702522	3300010885	Freshwater Lake	LGLTFFALSTDYKKNQLDEILYLITKGFTYGDVLTMPIFVRRYYINFLIEKQTENG*
Ga0153799_10590502	3300012012	Freshwater	MDYKKGQLDEILFLIKKGFSYGDIITMPVFIRRYYVEYIIELENAPK*
(restricted) Ga0172368_105180252	3300013123	Freshwater	MEYKKYQLDEILFLVKRGFSYSDIISMPVHTRKYYVSYIIELENG*
(restricted) Ga0172365_100213113	3300013127	Sediment	MGQLKEILFLVKRGFSYSDILSMPIYVRRYYIQYITELETEK*
(restricted) Ga0172365_108551952	3300013127	Sediment	MEYKKGQLDEILFLVKRGFSYSDILAMPIYIRRYFVEYMIELQNEK*
(restricted) Ga0172364_100429131	3300013129	Sediment	MGQLKEILFLVKRGFSYSDILSMPIYVRRYYIQYITELESEK*
Ga0177922_104394042	3300013372	Freshwater	MEYKKGQLDEILFLIKKGFSYGDIITMPVFIRRYYVEYIIELENAPK*
Ga0177922_110610701	3300013372	Freshwater	MEYRKTQLDEFLFLIKKGFNYSELLTMPIYLRRYY
(restricted) Ga0172376_105356802	3300014720	Freshwater	MEYKKGQLDEILFLIKKGFSYGDVLTMPIFIRRYYVEYILELENSPK*
Ga0181344_11208522	3300017754	Freshwater Lake	MSMLKSASGWSFFVLSMDYKKGQLDEILFLIKKGFSYGDILTMPIFIRRYYVEYILELENSPK
Ga0194113_100032615	3300020074	Freshwater Lake	MAYKKGQLDEILFLIKRGFSYGDIITMPVFIRRYYVEYIIELENAPK
Ga0211732_15380392	3300020141	Freshwater	MEYKKGQLDEILFLVKKGFSYGDILTMPVYLRRYYVDYIIELENKTT
Ga0211736_101760221	3300020151	Freshwater	LQLGLGLTFFALSTEYKKNQLSEIHYLVKKGFSYGDILTMPVYIRRYYIGYIMEMENPN
Ga0211734_104268741	3300020159	Freshwater	QLDEILYLVKRGFSYRDILLMPIYIRRYYINYLIEIENTPR
Ga0211734_107061391	3300020159	Freshwater	DSGLSFFVLSTDYKKGQLDEILFLVKRGFSYGDILSMPVYIRRYYIQYLISLESGNN
Ga0211734_107064882	3300020159	Freshwater	DSGLSFFVLSTDYKKGQLDEILFLVKRGFSYGDILSMPVYIRRYYIQYLISLENGNN
Ga0211733_100235841	3300020160	Freshwater	NQLTEILFLVKRGFSYGDIMSMPVYVRKYFISFMMELENSN
Ga0211733_109447321	3300020160	Freshwater	SFFDLSTEYKRGQLNEILYLVKKGFSYGDIVSMPIYIRRYYVEFLLELENSN
Ga0211726_110380571	3300020161	Freshwater	NQLSEIHYLVKKGFSYGDILTMPVYIRRYYIGYIMEMENPN
Ga0211729_101878772	3300020172	Freshwater	KKGQLDEILFLVKRGFSYGDILSMPVYIRRYYIQYLISLEGGND
Ga0194115_104179532	3300020183	Freshwater Lake	MEYKKGQLDEILFLIKKGFSYGDVLTMPIFIRRYYVEYILELENSPK
Ga0194120_100479751	3300020198	Freshwater Lake	QLDEILFLIKRGFSYGDIITMPVFIRRYYVEYIIELENAPK
Ga0194132_106051572	3300020214	Freshwater Lake	LSTDYKKGQLDEILFLVKRGFSYGDILNMPVYLRRYYVSYLIELENSPK
Ga0208232_10086712	3300020527	Freshwater	MEYRKTQLDEFLYLIKKGFNYSELLTMPIYLRRYYVNYIIEIENKQ
Ga0208232_10245611	3300020527	Freshwater	SNLELGLGLTFFALSTEYKKNQLSEIHYLIRKGFSYGDILTMPVYIRRYYIGYIMELENT
Ga0214245_10633221	3300020722	Freshwater	MDYKKGQLDEILFLVKRGFSYSDIISMPVHIRRYFVEYLIE
Ga0222714_10000069107	3300021961	Estuarine Water	MLKSASGWSFFVLSMDYKKGQLDEILFLIKKGFSYGDILTMPIFIRRYYVEYILELENSP
Ga0222713_103115772	3300021962	Estuarine Water	STDYSKGQLDEILFLVKRGFSYRDILLMPVYIRRYYISYLIELENNNK
Ga0214919_100139984	3300023184	Freshwater	MKSNLILGSGLTFFALSTEYKKNQLSEILFLVKRGFSYGDIISMPIYIRRYYIEYIMELENS
Ga0244775_102184501	3300024346	Estuarine	MEYKKGQLDEILFLIKKGFSYGDLLTMPVHLRRYYVNYIIELENNTQ
Ga0244776_100018184	3300024348	Estuarine	MDYKKGQLDEILFLIKKGFSYGDLLTMPVHLRRYYVNYIIELENNTQ
Ga0208257_10058302	3300025389	Freshwater	MDYKKIQLDEILFLVKKGFSYGDILTMPVYLRRYYVEYIIELENKQS
Ga0208554_10298142	3300027212	Estuarine	LGLGLTFFALSTEYKKNQLSEIHYLVKKGFSYGDILTMPVYIRRYYIGYIMEMENPN
Ga0208440_10601442	3300027281	Estuarine	MEYRKTQLDEFLFLIKKGFNYSELLTMPIYLRRYYVNYIIEIENKQ
Ga0255118_10869842	3300027593	Freshwater	LSTEYRKGMLDEILYLVRRGFSYNDILTMPVYVRRYYINYIMEIESPN
Ga0208974_10620492	3300027608	Freshwater Lentic	NFFALSTEYRKTQLDEILFLIKRGFSYGDILSMPISIRRYYVNYIMELENSKN
Ga0209084_100007969	3300027749	Freshwater Lake	MDYKKGQLDEILFLVKRGFSYGDILSMPVYIRRYYINYMIEKETENN
Ga0209500_104264741	3300027782	Freshwater Lake	LSTDYKKGQLDEFLFLIKRGFTYGDILTMPVWERRYYVNYLIELENKQ
Ga0209353_101948432	3300027798	Freshwater Lake	ILFLVKRGFSYSDIISMPVYIRRYYVQYMLELEGGNN
Ga0209777_101446862	3300027896	Freshwater Lake Sediment	MDYKKGQLNEILYLVKRGFSYSDIISMPVYIRRYFIQYISELENEK
Ga0209777_105914582	3300027896	Freshwater Lake Sediment	MDYKKGQLDEILFLVKRGFSYSDIISMPVHIRRYFVEYLIEIENRK
Ga0247722_100029575	3300028027	Deep Subsurface Sediment	KLKLGSGLSFFVLSTDYKKGQLDEFLFLIKRGFTYGDILTMPVWERRYYVNYLIELENKK
Ga0315291_108477372	3300031707	Sediment	MEYRKGQLDEILYLIKRGFTYSDIISMPVFIRRYYVQYINELENVK
Ga0315293_101110223	3300031746	Sediment	DLGRNFFALSMDYKKNQLDEILFLVNRHFSYSDIISMPVYLRRYFRDYILELENKE
Ga0315293_103487802	3300031746	Sediment	MDYKKGQLDEILFLIKRGFAYRDILLMPISIRRYYVNYIYGLENTPA
Ga0315288_107630582	3300031772	Sediment	MEYRKGQLKEILFLVKRGFSYLDIISMPVYIRRYYVQYIQELENEK
Ga0315288_107754342	3300031772	Sediment	MDYKKNQLDEILFLVNRHFSYSDIISMPVYLRRYFRDYILELENKE
Ga0315908_105752081	3300031786	Freshwater	MAYKKGQLDEILFLIKRGFSYGDIITMPVFIRRYYVEYIIELEN
Ga0315909_101088721	3300031857	Freshwater	GQLDEILYLVKRGFSYRDILLMPIYIRRYYINYLIEIENTPK
Ga0315289_114502512	3300032046	Sediment	RESQLKEIFMLVKRGFSYGDILVMPIFVRRYYFNYIIEQENKK
Ga0315284_107395122	3300032053	Sediment	MEYREGQLKEILFLIREGFSYNDVLSMPVYIRKYYIDYIIEMKNK
Ga0315283_111339472	3300032164	Sediment	MEYRKGQLDEILYLIKRGFSYSDIISMPVHIRRYFIQYLTELENSK
Ga0316625_1000183342	3300033418	Soil	MDYRMGQLKEILFLVKRGFSYSDILTMPVYIRRYYIQYIVELENQK
Ga0334985_0443858_622_762	3300034018	Freshwater	TEYKKNQLSEIHYLIRKGFSYGDILTMPVYIRRYYIGYIMELENTQ
Ga0334987_0009420_1166_1309	3300034061	Freshwater	MEYKKGQLDEILFLVKKGFSYGDIITMPVFIRRYYVEYIIELENAPK
Ga0335020_0219546_824_946	3300034082	Freshwater	MDYKKGQLDEILFLIKKGFSYGDLLTMPVHLRRYYVNYIIE
Ga0335020_0626741_366_500	3300034082	Freshwater	MEYRKTQLDEFLYLIKKGFNYSELLTMPIYLRRYYVNYIIEIENK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters