NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103216

Metagenome / Metatranscriptome Family F103216

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103216
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 91 residues
Representative Sequence MSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPASALRLVVSNDRPENEENPSAEGPEPQPA
Number of Associated Samples 97
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 76.24 %
% of genes near scaffold ends (potentially truncated) 36.63 %
% of genes from short scaffolds (< 2000 bps) 88.12 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (57.426 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(12.871 % of family members)
Environment Ontology (ENVO) Unclassified
(39.604 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(35.644 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.93%    β-sheet: 0.00%    Coil/Unstructured: 62.07%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF00378ECH_1 49.50
PF01370Epimerase 12.87
PF01649Ribosomal_S20p 2.97
PF06831H2TH 0.99
PF11638DnaA_N 0.99
PF01209Ubie_methyltran 0.99
PF00355Rieske 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0268Ribosomal protein S20Translation, ribosomal structure and biogenesis [J] 2.97
COG0266Formamidopyrimidine-DNA glycosylaseReplication, recombination and repair [L] 0.99
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.99
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 0.99

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A57.43 %
All OrganismsrootAll Organisms42.57 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664022|INPgaii200_c0872249Not Available590Open in IMG/M
3300004114|Ga0062593_100861952Not Available910Open in IMG/M
3300004281|Ga0066397_10053620Not Available735Open in IMG/M
3300005093|Ga0062594_101027947All Organisms → cellular organisms → Bacteria → Proteobacteria796Open in IMG/M
3300005105|Ga0066812_1003819All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300005161|Ga0066807_1043240Not Available517Open in IMG/M
3300005164|Ga0066815_10014145Not Available1034Open in IMG/M
3300005328|Ga0070676_10990378All Organisms → cellular organisms → Bacteria → Proteobacteria630Open in IMG/M
3300005332|Ga0066388_106314652Not Available598Open in IMG/M
3300005334|Ga0068869_100456387All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1060Open in IMG/M
3300005338|Ga0068868_100870275Not Available817Open in IMG/M
3300005344|Ga0070661_101321605All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300005457|Ga0070662_101315213All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300005536|Ga0070697_100392666All Organisms → cellular organisms → Bacteria → Proteobacteria1203Open in IMG/M
3300005543|Ga0070672_101823686All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300005548|Ga0070665_102610237Not Available506Open in IMG/M
3300005617|Ga0068859_102310903Not Available593Open in IMG/M
3300005719|Ga0068861_100919705All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300006573|Ga0074055_11679697Not Available678Open in IMG/M
3300006574|Ga0074056_11500659All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300006579|Ga0074054_11938396All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium XBB2008577Open in IMG/M
3300006581|Ga0074048_10616309All Organisms → cellular organisms → Bacteria → Proteobacteria569Open in IMG/M
3300006605|Ga0074057_12180598All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300006854|Ga0075425_102471242Not Available575Open in IMG/M
3300006881|Ga0068865_100100478All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2117Open in IMG/M
3300006904|Ga0075424_100097810All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3092Open in IMG/M
3300009092|Ga0105250_10515178Not Available544Open in IMG/M
3300009094|Ga0111539_10244277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi2090Open in IMG/M
3300009156|Ga0111538_10111391All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3476Open in IMG/M
3300009177|Ga0105248_10085514All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi3549Open in IMG/M
3300009545|Ga0105237_10975462Not Available854Open in IMG/M
3300010029|Ga0105074_1073046Not Available625Open in IMG/M
3300010043|Ga0126380_10042697All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2391Open in IMG/M
3300010047|Ga0126382_10005783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi5595Open in IMG/M
3300010154|Ga0127503_10628230Not Available1115Open in IMG/M
3300010373|Ga0134128_10130628All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2845Open in IMG/M
3300010375|Ga0105239_10130345All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2796Open in IMG/M
3300012907|Ga0157283_10060722Not Available901Open in IMG/M
3300012937|Ga0162653_100088397Not Available512Open in IMG/M
3300012957|Ga0164303_11454603Not Available515Open in IMG/M
3300012958|Ga0164299_11187003Not Available576Open in IMG/M
3300012964|Ga0153916_10933993All Organisms → cellular organisms → Bacteria → Proteobacteria948Open in IMG/M
3300012985|Ga0164308_11071451Not Available720Open in IMG/M
3300012987|Ga0164307_10019314All Organisms → cellular organisms → Bacteria → Proteobacteria3494Open in IMG/M
3300012989|Ga0164305_10181970All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1460Open in IMG/M
3300013297|Ga0157378_10329500All Organisms → cellular organisms → Bacteria → Proteobacteria1486Open in IMG/M
3300013307|Ga0157372_10740627All Organisms → cellular organisms → Bacteria → Proteobacteria1143Open in IMG/M
3300014969|Ga0157376_13017655Not Available510Open in IMG/M
3300015371|Ga0132258_13848348All Organisms → cellular organisms → Bacteria → Proteobacteria1021Open in IMG/M
3300017792|Ga0163161_10470005Not Available1019Open in IMG/M
3300017947|Ga0187785_10749131Not Available516Open in IMG/M
3300018027|Ga0184605_10139775Not Available1086Open in IMG/M
3300018028|Ga0184608_10419819Not Available579Open in IMG/M
3300018072|Ga0184635_10053214All Organisms → cellular organisms → Bacteria → Proteobacteria1565Open in IMG/M
3300018076|Ga0184609_10217571Not Available892Open in IMG/M
3300018078|Ga0184612_10075670All Organisms → cellular organisms → Bacteria → Proteobacteria1756Open in IMG/M
3300019233|Ga0184645_1107955Not Available500Open in IMG/M
3300019259|Ga0184646_1518258Not Available570Open in IMG/M
3300021078|Ga0210381_10376828Not Available522Open in IMG/M
3300022694|Ga0222623_10216587Not Available742Open in IMG/M
3300022756|Ga0222622_10862654Not Available663Open in IMG/M
3300025321|Ga0207656_10752431Not Available500Open in IMG/M
3300025900|Ga0207710_10218457Not Available946Open in IMG/M
3300025907|Ga0207645_10898617Not Available602Open in IMG/M
3300025912|Ga0207707_11435647Not Available549Open in IMG/M
3300025926|Ga0207659_10466253All Organisms → cellular organisms → Bacteria → Proteobacteria1065Open in IMG/M
3300025931|Ga0207644_10474566All Organisms → cellular organisms → Bacteria → Proteobacteria1030Open in IMG/M
3300025933|Ga0207706_10125161All Organisms → cellular organisms → Bacteria → Proteobacteria2261Open in IMG/M
3300026035|Ga0207703_10083034All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2676Open in IMG/M
3300026041|Ga0207639_10764772Not Available899Open in IMG/M
3300026118|Ga0207675_100451159All Organisms → cellular organisms → Bacteria → Proteobacteria1274Open in IMG/M
3300027717|Ga0209998_10025651Not Available1284Open in IMG/M
3300027907|Ga0207428_10198526All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1510Open in IMG/M
3300027952|Ga0209889_1098356Not Available588Open in IMG/M
3300028587|Ga0247828_10677244Not Available639Open in IMG/M
3300028587|Ga0247828_10809244All Organisms → cellular organisms → Bacteria → Proteobacteria595Open in IMG/M
3300028592|Ga0247822_10239573All Organisms → cellular organisms → Bacteria → Proteobacteria1369Open in IMG/M
3300028608|Ga0247819_10214365Not Available1042Open in IMG/M
3300028784|Ga0307282_10335868Not Available730Open in IMG/M
3300028814|Ga0307302_10607847Not Available544Open in IMG/M
3300028889|Ga0247827_10320091Not Available913Open in IMG/M
3300030829|Ga0308203_1059652Not Available594Open in IMG/M
3300030902|Ga0308202_1055714Not Available736Open in IMG/M
3300031092|Ga0308204_10192352Not Available631Open in IMG/M
3300031184|Ga0307499_10020792Not Available1410Open in IMG/M
3300031200|Ga0307496_10035706Not Available790Open in IMG/M
3300031677|Ga0307480_1024158Not Available504Open in IMG/M
3300031720|Ga0307469_11296466Not Available691Open in IMG/M
3300031740|Ga0307468_102316525Not Available522Open in IMG/M
3300031820|Ga0307473_10407784All Organisms → cellular organisms → Bacteria → Proteobacteria893Open in IMG/M
3300031908|Ga0310900_11025301Not Available679Open in IMG/M
3300032003|Ga0310897_10125018All Organisms → cellular organisms → Bacteria → Proteobacteria1053Open in IMG/M
3300032174|Ga0307470_10884151All Organisms → cellular organisms → Bacteria → Proteobacteria700Open in IMG/M
3300032174|Ga0307470_11080464Not Available644Open in IMG/M
3300032174|Ga0307470_11607603All Organisms → cellular organisms → Bacteria → Proteobacteria544Open in IMG/M
3300032180|Ga0307471_100931557All Organisms → cellular organisms → Bacteria → Proteobacteria1036Open in IMG/M
3300032205|Ga0307472_100329106Not Available1243Open in IMG/M
3300032205|Ga0307472_101077845Not Available759Open in IMG/M
3300033551|Ga0247830_11588019Not Available524Open in IMG/M
3300034414|Ga0373905_061573Not Available589Open in IMG/M
3300034819|Ga0373958_0056089Not Available843Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.87%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil9.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.92%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.95%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.96%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.97%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.98%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.98%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.98%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.98%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.98%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.99%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.99%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.99%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.99%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.99%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.99%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.99%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.99%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.99%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005105Soil and rhizosphere microbial communities from Laval, Canada - mgHPCEnvironmentalOpen in IMG/M
3300005161Soil and rhizosphere microbial communities from Laval, Canada - mgLPAEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012937Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300019233Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031200Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_SEnvironmentalOpen in IMG/M
3300031677Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034414Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A4.3EngineeredOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_087224922228664022SoilMSXNKNHKAALDGPPGETGEACYWARFDYLKLRETLEAIVSAMEATAKEDQPPGEPEPDCTLRLVVSNNQPETQEDPPAEGPEPQPA
Ga0062593_10086195223300004114SoilMSRNKNHKAALDGPPGETGEACYWARFDYLKLRETLEAIVSAMEATSKEDQPPGEPEPDCTLRLVVSNNQPETQEDPPAEGPEPQPA*
Ga0066397_1005362013300004281Tropical Forest SoilMSRNKNHKAALDWAEGETSSGEECFWARFDYLKLRETLEAIVSAMEATAKEDQPPGEPEPDSTLRLVVSNDRPASEENPSAEGPEPQPA*
Ga0062594_10102794723300005093SoilMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRLENEENPSAEGPEPQPA*
Ga0066812_100381923300005105SoilMSRNNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA*
Ga0066807_104324013300005161SoilMSRNNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNERPEPQEDPPA
Ga0066815_1001414513300005164SoilMSRNKNHKAAFDGTPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPALEAEPASALRLVVSNDRPENEKNPSAEGPEPQPA*
Ga0070676_1099037823300005328Miscanthus RhizosphereMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQPA*
Ga0066388_10631465213300005332Tropical Forest SoilMSRNKNHKAALDWAEGETSSGEECYWARFDYLKLRETLEAIVSAMETTAQEDQPASEAEPASALRLVVSNDR
Ga0068869_10045638723300005334Miscanthus RhizosphereMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRPENEENPSAEGPEPQPA*
Ga0068868_10087027513300005338Miscanthus RhizosphereMSRNKNHKAAFDGSPGDTGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRPENEENPSAEGPEPQPA*
Ga0070661_10132160513300005344Corn RhizosphereMSRNKNHKAAFDGSPGDTGEACYWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQPA*
Ga0070662_10131521323300005457Corn RhizosphereMSRNKNHKAAFDGSPGDTGEACYWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEP
Ga0070697_10039266623300005536Corn, Switchgrass And Miscanthus RhizosphereMSRNKNHKAAFDGTPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRPENEENPSAEGPEPQPA*
Ga0070672_10182368613300005543Miscanthus RhizosphereGLRNSLGLQQFLNPVVGRMAVMSRNKKHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRLENEENPSAEGPEPQPA*
Ga0070665_10261023713300005548Switchgrass RhizosphereMCCAKYTPSPHLQGLRNSLGLQQFLNPVVGRMAVMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNHRPENEENPSAEGPEPQPA*
Ga0068859_10231090313300005617Switchgrass RhizosphereMCCAKYTPSPHLQGLRNSLGLQQFLNPVVGRMAVMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRLENEENPSAEGPEPQPA*
Ga0068861_10091970513300005719Switchgrass RhizosphereGRMAVMSRNNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA*
Ga0074055_1167969713300006573SoilMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPASALRLVVSNDRPENEENPSAEGPEPQPA*
Ga0074056_1150065913300006574SoilLNPVVGRMAVMSRNNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA*
Ga0074054_1193839613300006579SoilMSRNKNHKAAFDGTPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPASALRLVVPRPENEENPSAEGPEPQPA*
Ga0074048_1061630913300006581SoilMSRNNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEP
Ga0074057_1218059813300006605SoilVMSRNNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA*
Ga0075425_10247124223300006854Populus RhizosphereMSRNKNHKAALDWAEGETPSGEECFWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVISNDRLENEENPSAEGPEPQPA*
Ga0068865_10010047823300006881Miscanthus RhizosphereMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQPA*
Ga0075424_10009781033300006904Populus RhizosphereMSRNKNHKAALDGPPGETGEACYWARFDYLKLRETLEAIVSAMEATAKEDQPPGEPEPDCTLRLVVSNNQPETQEDPPAEGPEPQPA*
Ga0105250_1051517813300009092Switchgrass RhizosphereMAVMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRPENEENPSAEGPEPQPA*
Ga0111539_1024427713300009094Populus RhizosphereMAVMSRNKNHKAALDGPPGETGEACYWARFDYLKLRETLEAIVSAMEATSKEDQPPGEPEPDCTLRLVVSNNQPETREDPPAEGPEPQPA*
Ga0111538_1011139143300009156Populus RhizosphereMAVMSRNKNHKAALDGPPGETGEACYWARFDYLKLRETLEAIVSAMEATSKEDQPPGEPEPDCTLRLVVSNNQPETQEDPPAEGPEPQPA*
Ga0105248_1008551413300009177Switchgrass RhizosphereMAVMSRNKNHKAAFDGSPGDTGEACYWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQPA*
Ga0105237_1097546213300009545Corn RhizosphereNPVVGRMAVMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRLENEENPSAEGPEPQPA*
Ga0105074_107304613300010029Groundwater SandMSRNKNHKAALDWPPGERSPGDECYWARFDYLKLRETLEAVVSAMEATAKEDAPASEPEPGSTLRLVVSNDRPESEEDPTADGPEPQPA*
Ga0126380_1004269713300010043Tropical Forest SoilMAVMSRNKNHKAALDWAEGETSSGEECFWARFDYLKLRETLEAIVSAMEATAKEDQPPGESEPDSTLRLVVSNDRPASEENPSAEGPEPQPA*
Ga0126382_1000578323300010047Tropical Forest SoilMAVMSRNKNHKAALDWAEGETSSGEECFWARFDYLKLRETLEAIVSAMEATAKEDQPPGESEPDSTLRLVVSNDRRASEENPSAEGPEPQPA*
Ga0127503_1062823023300010154SoilAGLQQFLNPVVGRMAVMSRNNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPGPLPA*
Ga0134128_1013062823300010373Terrestrial SoilMAVMSRNKNHKAAFDGSPGDTGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRLENEENPSAEGPEPQPA*
Ga0105239_1013034533300010375Corn RhizosphereMAVMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRLENEENPSAEGPEPQPA*
Ga0157283_1006072223300012907SoilSCSDPTVLKKLSLGGNSLGVQGFLNPVVGRMAVMSRNKNHKAALDGPPGETGEACYWARFDYLNLRDTLEAIVSAMEATSKEDQPPGEPEPDCTLRLVVSNNQPETQEDPPAEGPEPQPA
Ga0162653_10008839713300012937SoilMAVMSRNNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA*
Ga0164303_1145460323300012957SoilVMSRNKNHKAAFDWAEGETPLGEECFWARFDYLKLRETLEAIVSTMETTAKEDSPASEAEPASTLRLVVSNDRLENEENPSAEGPEPQPA*
Ga0164299_1118700313300012958SoilMAVMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQPA*
Ga0153916_1093399323300012964Freshwater WetlandsMAVMSRNKNHKAALDWAEGETPLGEECFWARFDYLKLRETLEAIVSAMETTAKEDSPTSEAEPVSTLRLVVSNDRPEGEENPSADGPEPLPA*
Ga0164308_1107145113300012985SoilSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRPENEENPSAEGPEPQPA*
Ga0164307_1001931433300012987SoilMAVMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQPA*
Ga0164305_1018197033300012989SoilSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRLENEENPSAEGPEPQPA*
Ga0157378_1032950023300013297Miscanthus RhizosphereMAVMSRNKNHKAAFDGSPGDTGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQPA*
Ga0157372_1074062723300013307Corn RhizosphereMAVMSRNKNHKAAFEGSPGDTGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRLENEENPSAEGPEPQPA*
Ga0157376_1301765513300014969Miscanthus RhizosphereFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRPENEENPSAEGPEPQPA*
Ga0132258_1384834823300015371Arabidopsis RhizosphereMEGLAVMSRNKNHKAAFDGTPGETGEACYWARFDYLKLRETLEAIVSAMEMTAKEDQPASEAEPASALRLVVSNDRPENKENPSSEGPEPQPA*
Ga0163161_1047000513300017792Switchgrass RhizosphereMSRNKNHKAALDWAEGETPSGEECFWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRPEGEENPSADGPEPLPA
Ga0187785_1074913113300017947Tropical PeatlandMSRNKNHKAAFEVPPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPVSALRLVVSNDRPENEENRSAEGPEPQPA
Ga0184605_1013977513300018027Groundwater SedimentMSRNKNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVTAMETTAKEDLPAPEAAPSGALRLVVSNDRPEPQEDPPAEGPEPLPA
Ga0184608_1041981913300018028Groundwater SedimentLLLSSIHLRRGVMMCCAKYTRSPHLQGLRNSLGLQQFLNPVVGRMAVMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQPA
Ga0184635_1005321423300018072Groundwater SedimentMSRNNNHKAALDWAPGEPPSGEECYWARIDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA
Ga0184609_1021757123300018076Groundwater SedimentMSRNKNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPAPEAAPGGALRLVVSNDRPEAQEDPPAEGPEPQPA
Ga0184612_1007567023300018078Groundwater SedimentMSRNKNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA
Ga0184645_110795513300019233Groundwater SedimentGAGLQQFLNPVVGRMAVMSRNKNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNVRPEPQEDPPAEGPEPLPA
Ga0184646_151825813300019259Groundwater SedimentNGAGLQQFLNPVVGRMAVMSRNKNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPAPEAAPGGALRLVVSNDRPETQEDPPAEGPEPLPA
Ga0210381_1037682813300021078Groundwater SedimentERGGMICCAKHTPSPHLLWLRNGAGLQQFLNPVVGRMAVMSRNKNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPAPEAAPGGALRLVVSNDRPEAQEDPPAEGPKPQPA
Ga0222623_1021658713300022694Groundwater SedimentMSRNKNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPAPEAAPGGALRLVVSNDRPETQEDPPAEGPEPQPA
Ga0222622_1086265413300022756Groundwater SedimentMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQPA
Ga0207656_1075243113300025321Corn RhizosphereMSRNKNHKAAFDGSPGDTGEACYWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVVSNDRLENEENP
Ga0207710_1021845713300025900Switchgrass RhizosphereMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRPENEENPSAEGPEPQPA
Ga0207645_1089861713300025907Miscanthus RhizosphereMCCAKYTPSPHLQGLRNSLGLQQFLNPVVGRMAVMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQP
Ga0207707_1143564713300025912Corn RhizosphereMCCAKYTPSPHLQGLRNSLGLQQFLNPVVGRMAVMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRLENEENPSAEGPEPQP
Ga0207659_1046625323300025926Miscanthus RhizosphereMSRNKNHKAAFDGSPGDTGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRPENEENPSAEGPEPQPA
Ga0207644_1047456623300025931Switchgrass RhizosphereMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQPA
Ga0207706_1012516123300025933Corn RhizosphereMAEKSRNKNHKAAFDGSPGDTGEACYWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQPA
Ga0207703_1008303433300026035Switchgrass RhizosphereMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRLENEENPSAEGPEPQPA
Ga0207639_1076477223300026041Corn RhizosphereMSRNKNHKAAFDGSPGDTGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEVEPASTLRLVVSNDRLENEDQLSNYRGTDYMGKVGVELS
Ga0207675_10045115923300026118Switchgrass RhizosphereMSRNNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA
Ga0209998_1002565113300027717Arabidopsis Thaliana RhizosphereMSRNKNHKAALDGPPGETGEACYWARFDYLKLRETLEAIVSAMEATAKEDQPPGEPEPDCTLRLVVSNNQPETQEDPPAEGPEPQPA
Ga0207428_1019852623300027907Populus RhizosphereMSRNKNHKAALDGPPGETGEACYWARFDYLKLRETLEAIVSAMEATSKEDQPPGEPEPDCTLRLVVSNDRPENEENPSAEGPEPQPA
Ga0209889_109835623300027952Groundwater SandMSRNKNHKAALDWPPGERSPGEECYWARFDYLKLRETLEAVVSAMEATAKEDAPASEPEPGSTLRLVVSNDRPESEEDPTADGPEPQPA
Ga0247828_1067724413300028587SoilGETPLGEECFWARFDYLKLRETLDAIVSTMETTAKEDSPASEAEPASTLRLVVSNDRPEGEENPSADGPEPLPA
Ga0247828_1080924423300028587SoilMSRSNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA
Ga0247822_1023957323300028592SoilMSRNKNHKAALDWAEGETPLGEECFWARFDYLKLRETLEAIVSTMETTAKEDSPASEAEPASTLRLVVSNDRPEGEENPSADGPEPLPA
Ga0247819_1021436523300028608SoilMSRNNNHKADLDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPP
Ga0307282_1033586823300028784SoilMSRNKNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPAPEAAPGGALRLVVSNDRPETQEDPPAEGPEPLPA
Ga0307302_1060784723300028814SoilHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA
Ga0247827_1032009123300028889SoilAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA
Ga0308203_105965213300030829SoilAGLQQFLNPVVGRMAVMSRNKNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPAPEAAPGGALRLVVSNDRPETQEDPPAEGPEPLPA
Ga0308202_105571423300030902SoilMSRNNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPAPEAAPGGALRLVVSNDRPETQEDPPAEGPEPLPA
Ga0308204_1019235213300031092SoilVMSRNNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA
Ga0307499_1002079213300031184SoilMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPASALRLVVSNDRPENEENPSAEG
Ga0307496_1003570623300031200SoilMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPASALRLVVSNDRPENEENPSAEGPEPQPA
Ga0307480_102415823300031677Hardwood Forest SoilMSRNKNHKAALDWAEGETPLGEECFWARFDYLKLRETLEAIVSAMETTAKEDSPTSEAEPVSTLRLVVSNDRPEGEENPPADGPESLPA
Ga0307469_1129646623300031720Hardwood Forest SoilMSRNKNHKAALDWAEGETPSGEECFWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPTSALRLVVSNDRPENEENPPAEGPEPQPA
Ga0307468_10231652513300031740Hardwood Forest SoilMSRNKNHKAALDWAEGETPLGEECFWARFDYLKLRETLEAIVSTMETTAKEDSPASEAEPASTLRLVVSNDRPEGEENPSTDGPEPLP
Ga0307473_1040778423300031820Hardwood Forest SoilMSRNKNHKAALDWAEGETPLGEECFWARFDYLKLRETLEAIVSAMETTAKEDSPASEAEPASTLRLVVSNDRPEGEENPLADGPESLPA
Ga0310900_1102530113300031908SoilVMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSAEGPEPQPA
Ga0310897_1012501823300032003SoilMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVSAMETTAKEDQPASEAEPASALRLVVSYDRLENEENPSAEGPEPQPA
Ga0307470_1088415123300032174Hardwood Forest SoilMSRNNNHKAALDWAPGEPPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDGPEPQEDPPAEGPEPLPA
Ga0307470_1108046413300032174Hardwood Forest SoilMSRNKNHKAALDWAEGETPSGEECFWARFDYLKLRETLEAIVSAMETTAKEDSPTSEAEPVSTLRLVVSNDRPEGEENPPADGPEPQPA
Ga0307470_1160760323300032174Hardwood Forest SoilMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVVSNDRLENEE
Ga0307471_10093155723300032180Hardwood Forest SoilMSRNKNHKAALDWPEGETPSGEECFWARFDYLKLRETLEAIVSAMETTAKEDSPTSEAEPVSTLRLVVSNDRPEGEENPSADGPEPLPA
Ga0307472_10032910613300032205Hardwood Forest SoilHKAALDWAEGETPSGEECYWARFDYLKLRETLEAIVSAMETTAREDSPPSEVEPASTLRLVVSNDRPEGEENPPADGPEPQPA
Ga0307472_10107784523300032205Hardwood Forest SoilMSRNKNHKAALDWAPGETPSGEECYWARFDYLKLRETLEAIVSAMETTAKEDLPASEAAPDSTLRLVVSNDRPEPQEDPPAEGPEPLPA
Ga0247830_1158801913300033551SoilGRMAVMSRNKNHKAALDWAEGETPLGEECFWARFDYLKLRETLDAIVSTMETTAKEDSPASEAEPASTLRLVVSNDRPEGEENPSTDGPEPLPA
Ga0373905_061573_147_4253300034414Sediment SlurryMAVMSRNKNHKAAFDWAEGETPLGEECFWARFDYLKLRETLEAIVSAMETTAKEDSPASEAEPASTLRLVVSNDRPEGEENPSADGPEPLPA
Ga0373958_0056089_3_2393300034819Rhizosphere SoilMSRNKNHKAAFDGSPGETGEACYWARFDYLKLRETLEAIVFAMETTAKEDQPASEAEPASALRLVVSNDRLENEENPSA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.