Metagenome Family F101965

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101965
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	82 residues
Representative Sequence	GMLGANPRHEPQIGFDRVQSAEDRYLFGPDGKLVYQVGHVFTLQMHIVDKQHTRGLFLGDFFAIEEKGPRCLNKFPPELVRTRS
Number of Associated Samples	93
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.94 %
% of genes near scaffold ends (potentially truncated)	90.20 %
% of genes from short scaffolds (< 2000 bps)	94.12 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (7.843 % of family members)
Environment Ontology (ENVO)	Unclassified (38.235 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (30.392 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.04% β-sheet: 23.21% Coil/Unstructured: 68.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03401	TctC	8.82
PF09084	NMT1	8.82
PF12728	HTH_17	4.90
PF00535	Glycos_transf_2	1.96
PF04255	DUF433	1.96
PF04909	Amidohydro_2	1.96
PF13343	SBP_bac_6	1.96
PF00903	Glyoxalase	1.96
PF00486	Trans_reg_C	0.98
PF13393	tRNA-synt_His	0.98
PF00441	Acyl-CoA_dh_1	0.98
PF13561	adh_short_C2	0.98
PF00557	Peptidase_M24	0.98
PF01979	Amidohydro_1	0.98
PF05145	AbrB	0.98
PF02129	Peptidase_S15	0.98
PF00512	HisKA	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	8.82
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	8.82
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	8.82
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	1.96
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.98
COG3180	Uncharacterized membrane protein AbrB, regulator of aidB expression	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	92.16 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	90.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	90.20 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	89.22 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	89.22 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.98 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	89.22 %
unclassified Beijerinckia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia	0.98 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	89.22 %
Beijerinckia sp. 28-YEA-48	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. 28-YEA-48	0.98 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.98 %
Unclassified	root	N/A	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10021163	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1556	Open in IMG/M
3300000890\|JGI11643J12802_10943621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	713	Open in IMG/M
3300001139\|JGI10220J13317_11087455	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	830	Open in IMG/M
3300003996\|Ga0055467_10031587	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1273	Open in IMG/M
3300003997\|Ga0055466_10177838	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300004065\|Ga0055481_10283772	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300004157\|Ga0062590_100129117	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1679	Open in IMG/M
3300004480\|Ga0062592_101677444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300004808\|Ga0062381_10385586	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300005293\|Ga0065715_11041279	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300005332\|Ga0066388_104571154	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300005617\|Ga0068859_102697260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300005981\|Ga0081538_10360395	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300006163\|Ga0070715_10267621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	900	Open in IMG/M
3300006163\|Ga0070715_10481029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	707	Open in IMG/M
3300006196\|Ga0075422_10500835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	551	Open in IMG/M
3300006844\|Ga0075428_102452732	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300006853\|Ga0075420_101099228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300006854\|Ga0075425_102195064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300006871\|Ga0075434_100666390	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1058	Open in IMG/M
3300006904\|Ga0075424_102536936	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	536	Open in IMG/M
3300007004\|Ga0079218_12712872	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300007004\|Ga0079218_12911938	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300009012\|Ga0066710_101341004	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1110	Open in IMG/M
3300009078\|Ga0105106_10517253	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300009094\|Ga0111539_11262924	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	857	Open in IMG/M
3300009147\|Ga0114129_11278954	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300009157\|Ga0105092_10977678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300009167\|Ga0113563_11961785	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	699	Open in IMG/M
3300009792\|Ga0126374_10528389	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300010047\|Ga0126382_10839568	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	788	Open in IMG/M
3300010400\|Ga0134122_10508801	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1092	Open in IMG/M
3300010400\|Ga0134122_10913068	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	851	Open in IMG/M
3300011119\|Ga0105246_12196586	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300011419\|Ga0137446_1076810	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	775	Open in IMG/M
3300011420\|Ga0137314_1048812	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300011435\|Ga0137426_1008971	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2284	Open in IMG/M
3300011435\|Ga0137426_1036070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1258	Open in IMG/M
3300011444\|Ga0137463_1310356	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300012360\|Ga0137375_10201067	All Organisms → cellular organisms → Bacteria	1885	Open in IMG/M
3300012362\|Ga0137361_10152241	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2068	Open in IMG/M
3300012922\|Ga0137394_10284678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1413	Open in IMG/M
3300012929\|Ga0137404_10104298	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2293	Open in IMG/M
3300012930\|Ga0137407_10452492	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1195	Open in IMG/M
3300012931\|Ga0153915_13602482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300012944\|Ga0137410_10357633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1168	Open in IMG/M
3300012944\|Ga0137410_10952406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	729	Open in IMG/M
3300012955\|Ga0164298_10377418	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	908	Open in IMG/M
3300012988\|Ga0164306_10225282	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1330	Open in IMG/M
3300013306\|Ga0163162_13483859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300014263\|Ga0075324_1043308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	860	Open in IMG/M
3300014267\|Ga0075313_1049869	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	980	Open in IMG/M
3300014270\|Ga0075325_1048329	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	896	Open in IMG/M
3300014317\|Ga0075343_1028875	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1016	Open in IMG/M
3300014321\|Ga0075353_1220755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300014745\|Ga0157377_10272787	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1105	Open in IMG/M
3300014873\|Ga0180066_1014992	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1373	Open in IMG/M
3300015259\|Ga0180085_1163229	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300015372\|Ga0132256_102542296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300015373\|Ga0132257_103148654	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300015374\|Ga0132255_100478324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1827	Open in IMG/M
3300016387\|Ga0182040_10076142	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2194	Open in IMG/M
3300018052\|Ga0184638_1333968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300018056\|Ga0184623_10319958	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	698	Open in IMG/M
3300018064\|Ga0187773_10020213	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2851	Open in IMG/M
3300018079\|Ga0184627_10082736	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300018081\|Ga0184625_10512561	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	603	Open in IMG/M
3300018082\|Ga0184639_10560054	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300018084\|Ga0184629_10076713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1591	Open in IMG/M
3300018433\|Ga0066667_11316198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300020003\|Ga0193739_1038913	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1231	Open in IMG/M
3300020060\|Ga0193717_1143746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300021081\|Ga0210379_10432689	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	583	Open in IMG/M
3300021344\|Ga0193719_10086256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1365	Open in IMG/M
3300021560\|Ga0126371_10376063	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1559	Open in IMG/M
3300021560\|Ga0126371_13035224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300025157\|Ga0209399_10191910	Not Available	817	Open in IMG/M
3300025159\|Ga0209619_10082059	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1954	Open in IMG/M
3300025164\|Ga0209521_10558366	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300025167\|Ga0209642_10032060	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3069	Open in IMG/M
3300025167\|Ga0209642_10329136	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	865	Open in IMG/M
3300025311\|Ga0209343_10137159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. 28-YEA-48	1954	Open in IMG/M
3300025313\|Ga0209431_10219902	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1499	Open in IMG/M
3300025319\|Ga0209520_10194001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1279	Open in IMG/M
3300025917\|Ga0207660_11399661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	567	Open in IMG/M
3300026035\|Ga0207703_11880822	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300026051\|Ga0208911_1020539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300026058\|Ga0208421_1008562	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	871	Open in IMG/M
3300027056\|Ga0209879_1013673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1331	Open in IMG/M
3300027552\|Ga0209982_1032766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	819	Open in IMG/M
3300027614\|Ga0209970_1075671	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300027695\|Ga0209966_1061969	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	809	Open in IMG/M
3300030006\|Ga0299907_11039150	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	599	Open in IMG/M
3300032770\|Ga0335085_10988000	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	910	Open in IMG/M
3300033407\|Ga0214472_11579849	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300033419\|Ga0316601_102248363	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300034090\|Ga0326723_0287483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	737	Open in IMG/M
3300034147\|Ga0364925_0061194	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1293	Open in IMG/M
3300034147\|Ga0364925_0202257	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	731	Open in IMG/M
3300034165\|Ga0364942_0065159	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1170	Open in IMG/M
3300034165\|Ga0364942_0232392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	602	Open in IMG/M
3300034176\|Ga0364931_0139088	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.41%
Host-Associated	Host-Associated	20.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.88%
Aquatic	Environmental → Aquatic	23.53%
Plants	Host-Associated → Plants	20.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Sediment	Environmental → Aquatic → Sediment	12.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.82%
Freshwater	Environmental → Aquatic → Freshwater	6.86%
Floodplain	Environmental → Terrestrial → Floodplain	4.90%
Marine	Environmental → Aquatic → Marine	2.94%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.98%
Peat	Environmental → Terrestrial → Peat	0.98%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.80%
Loam	Environmental → Terrestrial → Soil → Loam	6.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	4.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.98%
Sand	Environmental → Terrestrial → Soil → Sand	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.88%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	4.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.98%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.84%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.86%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	6.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	4.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.94%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.98%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.98%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.98%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004065	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025157	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes)	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025311	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026051	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026058	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100211633	3300000793	Forest Soil	GYLQGMLGANPRHEPQIGPDRPHSAEDRYLYDEQGRLVYKAGMMFTLQMHIIDKQETRGLLLADSFVVTPNGPKCLNKFPPQLVQVGR*
JGI11643J12802_109436211	3300000890	Soil	DTGYEFYGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFSADGRLVYEVGHVFALQMHIVDKTHTRGLFLADFFAIEENGPRCLNKFPCELVRTRR*
JGI10220J13317_110874552	3300001139	Soil	EPQIGFDRVQSAEDRYLFGADGRLVYEVGHVFALQMHIVDKSHTRGLFLADFFAIEDKGPRCLNKFPCEMIRTRN*
Ga0055467_100315871	3300003996	Natural And Restored Wetlands	QSGEDRFLYGPDGRLVYQAGHVFTLQMHIVDKSHTRGLFLGDFFAIEENGPRCLNKFPPQLVRV*
Ga0055466_101778381	3300003997	Natural And Restored Wetlands	EPQIGFDRVQSTEDRFLFDSDGRLVYQVGHVFALQMHIVDKNHTRGLFLADFFAIEEKGPRCLNKFPCEIIRCRSS*
Ga0055481_102837721	3300004065	Natural And Restored Wetlands	KGYDVYGGYLQGMLGANPRHEPQIGPDRPQSAQDRFLYEDGKLVYKAGMVFTLQMHIIDKQETRGLFLADTFAIRESGPQCLNKYPPQIVRV*
Ga0062590_1001291173	3300004157	Soil	EPQIGFDRVQSAEDRYLFDSDGRLVYQVGHVFTLQMHIVDKSHTRGLFVGDFFVIEENGPRCLNNLPLEIMRTQL*
Ga0062592_1016774441	3300004480	Soil	LQGMLGANPRHEPQIGFDRVQSAEDRYLFDADGRLVYQAGHVFTLQMHIVDKSHTRGLFVGDFFAIEKDGPRCLNKFPLELVRTRR*
Ga0062381_103855861	3300004808	Wetland Sediment	FYGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFDADGRLVYQVGHVFTLQMHIVDQSHTRGLFVGDFFAIEKNGPRCLNKFPVELVRTRG*
Ga0065715_110412791	3300005293	Miscanthus Rhizosphere	NPRHEPQIGFDRVQSAEDRFLFDADGRLVYRVGHVFTLQMHIVDKSHARGIFVGDFFAIEEGGPRCLNKFPLELVRARG*
Ga0066388_1045711542	3300005332	Tropical Forest Soil	MLGANPRHEPQIGPDRSQSAEDRYLYDEQGRLVYKAGMVFTLQMHIIDKQETRRLFLADSCVVTLNGPKCMNKFPLQLVQVGR*
Ga0068859_1026972602	3300005617	Switchgrass Rhizosphere	QIGFDRVQSAEDRYLFDSDGRLVYQGGHVFTLQMHIVDKSHTRGLFVGDFFVIEENGPRCLNNLPLEIMRTQL*
Ga0081538_103603952	3300005981	Tabebuia Heterophylla Rhizosphere	PRHEPQIGPDRPQSAEDRYLYDGQGRLVYKAGMMFTLQMHIIDKQETRGLFLADSFVVTANGPKCLNKFPPQLVQIGR*
Ga0070715_102676212	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	DTEYEFYGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFDSDGRLVYQVGHVFTLQMHIVDKSHTRGLFVGDFFVIEENGPRCLNNLPLEIMRTQL*
Ga0070715_104810292	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RHEPQIGFDRVQSAEDRYLFGADGRLVYEVGHVFTLQMHIVDKKHTRGLFVADFFAIEENGPRCLNQLALEMMRTRP*
Ga0075422_105008352	3300006196	Populus Rhizosphere	QGMLGANPRHEPQIGFDRVQSAEDRYLFDPDGRLVYKVGHVFTLQMHIVDKKHTRGLFVGDFFAIEEHGPRCLNKLPLEMERTGA*
Ga0075428_1024527322	3300006844	Populus Rhizosphere	EFYGGFLQGMLGANPRHEPQIGFDRIQSAEDRYLYGPDGRLVYQVGHVFTLQMHIVDKQHTRGLFAGDFFAIEDKGPRCLNKVPLAMVRTRLA*
Ga0075420_1010992282	3300006853	Populus Rhizosphere	HEPQIGFDRVQSAEDRFLFGPDGRLVYQVGHVFALQMHIVDKQHTRGLFLADFFAVEAEGPRCLNKFPVELVRTGR*
Ga0075425_1021950641	3300006854	Populus Rhizosphere	GYEFYGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFGADGRLVYEVGHVFTLQMHIIDKRHTRGLFVGDFFAIEENGPRRLNKLPVELVRARGY*
Ga0075434_1006663901	3300006871	Populus Rhizosphere	QIGFDRVQSAEDRYLFDSDGRLVYQVGHVFTLQMHIVDKSHTRGLFVGDFFVIEENGPRCLNNLPLEIMRTQL*
Ga0075424_1025369361	3300006904	Populus Rhizosphere	EFYGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFDSAGRLVYQVGHVFTLQMHIVDKSHARGLFVGDFLVIEENGPRCLNNLPLEIMRTQL*
Ga0079218_127128721	3300007004	Agricultural Soil	QIGFDRVQSAEDRYLFDADGRLVYEVGHVFALQMHIVDKSHTRGLFLADFFAIEEKGPRCLNKFPCEMIRTRG*
Ga0079218_129119381	3300007004	Agricultural Soil	QIGFDRVQSAEDRYLFDADGRLVYEVGHVFALQMHIVDKSHARGLFLADFFAIEEKGPRCLNKFPCEMIRTRG*
Ga0066710_1013410042	3300009012	Grasslands Soil	VESVEDGYLFGAHVRLLYQVRHVFTLQMHVVDKKHTRGLFVADFFAIEENGPRCLKKLPLEMMRTRP
Ga0105106_105172531	3300009078	Freshwater Sediment	DRVQSAEDRYLFDADGRLVYQAGHVFTLQMHIVDKSHTRGLFVGDFFAIEKDGPRCLNKFPLELVRTRR*
Ga0111539_112629242	3300009094	Populus Rhizosphere	RVQSAEDRYLFDPDGRLVYKVGHVFTLQMHIVDKKHTRGLFVGDFFAIEEQGPRCLNKLPLEMERTGA*
Ga0114129_112789542	3300009147	Populus Rhizosphere	CHEPQIGPDRPQSAEDRYLYDEQGRLVYKAGMMFTLQMHIIDKQETRGLFLADSFVITANGPKCLNKFPPQLVRVGQ*
Ga0105092_109776782	3300009157	Freshwater Sediment	IHDTGYDVYGGYLQGMLGANPRHEPQIGPDRPQSAEDRYLYDEQGRLVYKAGMMFTLQMHIIDKQQTRGLFLADSFVVTANGPKCLNKFPPQLVRVGR*
Ga0113563_119617852	3300009167	Freshwater Wetlands	GYDVYGGYLQGMLGANPRHEPQIGPDRPQSAEDRYLYDEQGRLVYKAGMMFTLQMHIIDKQETRGLFLADSFVITANGPKCLNKFPPQLVRVGQ*
Ga0126374_105283891	3300009792	Tropical Forest Soil	PQIGPDRPQSAEDRYLYDEQGRLVYKAGMMFTLQMHIIDKQETRGLFLADSFVVSPNGPKCLNKFPPQFVQVGR*
Ga0126382_108395681	3300010047	Tropical Forest Soil	GMLGANPRHEPQIGPDRPQSAEDRYLYNEQGLLVYKAGMMFTLQMHIIDKQETRGLFLADSFAVTPNGPKCLNKFPPQLVQVGR*
Ga0134122_105088012	3300010400	Terrestrial Soil	PRHEPQIGFDRVQSAEDRYLFDSDGRLIYQVGHVFTLQMHIVDKSHTRGLFLGDFFAIEKDGPRCLNKFPVEWVRTRR*
Ga0134122_109130682	3300010400	Terrestrial Soil	HEPQIGFDRVQSAEDRYLFGADGRLVYEVGHVFTLQMHIVDKKHIRGLFVADFFAIEENGPRCLNELPLEMMRTRP*
Ga0105246_121965861	3300011119	Miscanthus Rhizosphere	GFLQGMLGANPRHEPQIGFDRVQSAEDRYLFDSGGRLVYQVGHVFTLQMHIVDKSHTRGLFVGDFFVIEENGPRCLNNLPLEIMRTQL*
Ga0137446_10768101	3300011419	Soil	GFDRVQSAEDRFLFDADGRLVYQIGHVFALQMPIVDKPHTRGLFLADFFAIEASGPRCLNKYPVEIVRVRSY*
Ga0137314_10488121	3300011420	Soil	PRHEPQIGFDRVQSAEDRFLFGADGRLVYQVGHVFALQMHIVDKQHTRGLFLADFFAIEANGPRCLNKFPVELVRTGR*
Ga0137426_10089715	3300011435	Soil	PQIGFDRVQSAEDRYLFDADGRLVYQAGHVFTLQMHIVDKSHTRGLFVGDFVAIEKDGPRCLNKFPLELARTRR*
Ga0137426_10360703	3300011435	Soil	QGMLGANPRHEPQIGFDRVQSAEDRFLFDPDGRLVYQVGHVFALQMHIVDKQHTRGLFLADFFAIEENGPRCLNKLSPELLRTRSS*
Ga0137463_13103561	3300011444	Soil	QGMLGANPRHEPQIGFDRVQSAEDRYLFDIDGRLVYQVGHVFALQMHIVDQQHTRGLFLADFFAIEEAGPRCLNKFPPELVWAGNR*
Ga0137375_102010673	3300012360	Vadose Zone Soil	GFDRVQSAEDRYLYGPDGRLVYQVGHVFTLQMHIVDKNYTRGLFVGDFFVIEERGPRCLNKLPLELMRTLSPA*
Ga0137361_101522412	3300012362	Vadose Zone Soil	VESVEDGYLFGAHVRLLYQVRHVFTLQMHVVDKKHTRGLFVADFFAIEENGPRCLKKLPLEMMRTRP*
Ga0137394_102846781	3300012922	Vadose Zone Soil	TGCEFFGGFLQGMLGANPRHEPQIDFDRVQSAEDRFAGHVFTLQMHIVDQTHTRGLFVGDFFAIEENGPRCLNKFPLKMVRTRS*
Ga0137404_101042984	3300012929	Vadose Zone Soil	LSAGKFIHETGYDVYGGYLQGMLGANPRHEPQIGPDRPQSAEDRYLYDEQGRLVYKTGMMFTLQMHIIDKQETRGLFLADSFVVASNGPKCLN
Ga0137407_104524922	3300012930	Vadose Zone Soil	DVYGGYLQGMLGANPRHEPQIGPDRPQSAEDRYLYDEQGRLVYKTGMMFTLQMHIIDKQATRGLFLADSFVITVNGPKCLNKFPPQLVRVGW*
Ga0153915_136024822	3300012931	Freshwater Wetlands	LGANPRHEPQIGFDRVQSAEDRYLFGADGKLVYQVGHVFTLQMHIVDKQHRRGLFLGDFFAIEEKGPRCLNKFPPGLVRTGG*
Ga0137410_103576332	3300012944	Vadose Zone Soil	FDRVQSAEDRFAGHVFTLQMHIVDQTHTRGLFVGDFFAIEENGPRCLNKFPLKMVRTRS*
Ga0137410_109524062	3300012944	Vadose Zone Soil	VQSAEDRFLFDQDGRLVYQPGHVFTLQMHIVDQNHTRGLFVGDFFAIEENGPRCLNKFPLALVRAGN*
Ga0164298_103774182	3300012955	Soil	FLQGMLGANPRHEPQIGFDRVQSAEDRYLFDSDGRLVYQVGHVFTLQMHIVDKSHARGLFVGDFLVIEENGPRCLNNLPLEIMRTQL*
Ga0164306_102252821	3300012988	Soil	ATEPQIGFDRVQSAEDRYLFDSAGRLVYQVGHVFTLQMHIVDKSHARGLFVGDFLVIEENGPRCLNNLPLEIMRTQL*
Ga0163162_134838591	3300013306	Switchgrass Rhizosphere	YGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFGADGRLVYEVGHVFTLQMHIVDKKHTRGLFVADFFAIEENGPRCLNKLPLEMMRTRP*
Ga0075324_10433083	3300014263	Natural And Restored Wetlands	VYGGYLQGMLGANPRHEPQIGPDRPQSAEDRYLYDEQGRLVYKPGMMFTLQMHIIDKQETRGLFLADSFVITSDGPRCLNKFPPELVRVGR*
Ga0075313_10498692	3300014267	Natural And Restored Wetlands	YGGFLQGMLGANPRHEPQIGFDRVQSTEDRFLFDSDGRLVYQVGHVFALQMHIVDKNHTRGLFLADFFAIEEKGPRCLNKFPCEIIRCRSS*
Ga0075325_10483292	3300014270	Natural And Restored Wetlands	EFYGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFDKDGRLVYQTGHVFTVQMHIVDQSHTRGLFVGDFFAIEANGPRRLNKFPLAFVRAGK*
Ga0075343_10288751	3300014317	Natural And Restored Wetlands	FYGGFLQGMLGANPRHEPQIGFDRVQSVEDRYLFDADGRLVYQAGHVFTLQMHIVDHSHTRGLFVGDFFAIEKDGPRCLNKFPLELARTRR*
Ga0075353_12207551	3300014321	Natural And Restored Wetlands	NPRHEPQIGFDRVQSAEDRYLFDADGRLVYQAGHVFTVQMHIVDRSHTRGLFLGDFFAIEKNGPRCLNKFPVELVRTRR*
Ga0157377_102727871	3300014745	Miscanthus Rhizosphere	IGFDRVQSAEDRYLFDSAGRLVYQVGHVFTLQMHIVDKSHARGLFVGDFLVIEENGPRCLNNLPLEIMRTQL*
Ga0180066_10149922	3300014873	Soil	YGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFDADGRLVYQVGHVFALQMHIVDQQHTRGLFLADFFAIEEQGPRCLNKFPPELVRAGKK*
Ga0180085_11632292	3300015259	Soil	ANPRHEPQIGFDRAQSAEDRYLFGADGKLVYQVGHVFTLQMHIVDKQHTRGLFLGDFFAIEANGPRCLNKFPPGLVRIRG*
Ga0132256_1025422961	3300015372	Arabidopsis Rhizosphere	EPQIGFDRVQSAEDRYLFDSAGRLVYQVGHVFTLQMHIVDKSHTHGLFVGDFFVIEENGPRCLNNLPLEIMRA*
Ga0132257_1031486542	3300015373	Arabidopsis Rhizosphere	GANPRHEPQIGFDRVQSAEDRYLFDPDGRLVYKAGHVFTLQMHIVDKKHTRGLFVGDFFAIEEQGPRCLNKLPLEMKRTGA*
Ga0132255_1004783241	3300015374	Arabidopsis Rhizosphere	QIGFDRVQSAEDRYLFGADGRLVYEVGHVFTLQMHIVDKKHIRGLFVADFFAIEENGPRCLNELPLEMMRTRP*
Ga0182040_100761421	3300016387	Soil	LGANPRHEPQIGFDRVQSAEDRYLFAADGRLVYEVGHVFTLQMHIVDRKHTRGLFVADFFAIEENGPRCLNKLPLEMMRTLS
Ga0184638_13339681	3300018052	Groundwater Sediment	RVQSAEDRFLFGEDGRLVYQIGHVFTLQMHIVDKNHTRGLFVGDFFAIEERGPRCLNKLPLELMRTLSSA
Ga0184623_103199582	3300018056	Groundwater Sediment	LGANPRHEPQIGFDRVQSAEDRYLFGADGRLVYQVGHGFTLQMHSVDKSHTRGMFVGDFFAIEANGPRCLNKFPLELVRTRR
Ga0187773_100202135	3300018064	Tropical Peatland	QGMLGANPRHEPQIGFDRVQSAEDRYLFGPDGRLVYQVGHVFAVQMHIVDRPHTRGLFLADFFAIEENGPRCLNKFPPEMVRVKGL
Ga0184627_100827364	3300018079	Groundwater Sediment	GGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFAADGKLVYQVGHVFTLQMHIVDKQHTRGLFLGDFFAIEAKGPRCLNKFPPGLVRARG
Ga0184625_105125612	3300018081	Groundwater Sediment	TEYEFYGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFGADGRLVYEVGHVFTLQMHIVDKKHTLGLFVADFFAIEENGPRCLNKLPLEMMRTRP
Ga0184639_105600541	3300018082	Groundwater Sediment	EPQIGFDRVQSGEDRFLFDADGRLVYQVGHVFALQMHIVDKRHTRGLFLADFFAIEASGPRCLNKFPVQLVRTLVS
Ga0184629_100767131	3300018084	Groundwater Sediment	HEPQIGFDRVQSAEDRYLFGADGKLVYHVGHVFTLQMHIVDKQHTRGLFLGDFFAIEAKGPRCLNKFPPELVWAGG
Ga0066667_113161981	3300018433	Grasslands Soil	VESVEDGYLFGAHVRLLYQVRHVFTLQMHVVDKKHTRGLFVADFFAIEENGPRCLNKLPLEMMRTRL
Ga0193739_10389132	3300020003	Soil	FYGGFLQGMLGANPRHEPQIGFDRIQSNEDRFLYGPDGRLVYQVGHVFTLQMHIVDKSHSRGLFVGDFFAIEEKGPRCLNKFPPQIVRTVRH
Ga0193717_11437461	3300020060	Soil	DYEFYGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFGADGRLVYQIGHVFTLQMHIVDKSHTRGIFLGDFFAIEKKGPRCLNKFPLELMRTRG
Ga0210379_104326891	3300021081	Groundwater Sediment	GYLQGMLGANPRHEPQIGPDRPQSAEDRYLYDEQGRLVYKAGMMFTLQMHIIDKHETRGLFLADSFVITVNGPKCLNKFPPQLVRVGW
Ga0193719_100862561	3300021344	Soil	FYGGFLQGMLGANPRHEPQIGFDRVQSAEDRFLFDQDGRLVYQAGHVFTLQMHIVDQSHTRGLFVGDFFAIDENGPRCLNKFPLALVRAGN
Ga0126371_103760632	3300021560	Tropical Forest Soil	MLGANPRHEPQIGFDRVQNAEDRYLFAADGRLVEVGHVFTLQMHIVDRKHRRGLFVADFFAIEENGPRCLNKLPLEMMRTLS
Ga0126371_130352242	3300021560	Tropical Forest Soil	ANPRHEPQIGPDRPQSAEDHLYDEQGRLVYKAGMMFTLQMHIVDKQETRGLFLADSFVVTPNGPKCLNKFPPHLVQVGR
Ga0209399_101919102	3300025157	Thermal Springs	HEPQIGFDRITDAEDRFLFGGGRLVYKPGMVFTLQIHIIDKQKTRSLFLADTFAITESGYKCLNKFPPQLVRL
Ga0209619_100820593	3300025159	Soil	DRVQSAEDRYLFGPDGKLVYQVGHVFTLQMHIVDKKHTRGLFLGDFFAIEEKGPRCLNKFPPGLVRTHS
Ga0209521_105583661	3300025164	Soil	GMLGANPRHEPQIGFDRVQSAEDRYLFGPDGKLVYQVGHVFTLQMHIVDKQHTRGLFLGDFFAIEEKGPRCLNKFPPELVRTRS
Ga0209642_100320602	3300025167	Soil	MLGANPRHEPQIGFDRVQSAEDRFLFGPDGKLVYQVGHVFTLQMHIVDKQHTRGLFLGDFFAIEEKGPRCLNKFTPQLVRTYS
Ga0209642_103291361	3300025167	Soil	FLQGMLGANPRHEPQIGFDRVQSAEDRYLFGPDGKLVYQVGHVFTLQMHIVDKQHTRGLFLGDFFAIEEKGPRCLNKFPPEWVRAGG
Ga0209343_101371591	3300025311	Groundwater	QGMLGANPRHEPQIGFDRVQSAEDRFLFGPDGKLVYQVGHVFTLQMHIVDKQHTRGLFLGDFFAIEEKGPRCLNKFTPQLVRTYS
Ga0209431_102199021	3300025313	Soil	GFDRVQSAEDRYLFGPDGKLVYQVGHVFTLQMHIVDKQHTRGLFLGDFFAIEEKGPRCLNKFTPQLVRTYS
Ga0209520_101940012	3300025319	Soil	RVQSAEDRFLFGPDGKLVYQVGHVFTLQMHIVDKQHTRGLFLGDFFAIEEKGPRCLNKFTPQLVRTYS
Ga0207660_113996611	3300025917	Corn Rhizosphere	QGMLGANPRHEPQIGFDRVQSAEDRYLFDPDGRLVYQVGHVFALQMHIIDKSHTRGLFLADFFAIEENGPRCLNKLPCEMVRTGK
Ga0207703_118808222	3300026035	Switchgrass Rhizosphere	RVQSAEDRFLFDADGRLVYRVGHVFTLQMHIVDKSHARGIFVGDFFAIEEGGPRCLNKFPLELVRARG
Ga0208911_10205391	3300026051	Natural And Restored Wetlands	EFYGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFDKDGRLVYQTGHVFTVQMHIVDQSHTRGLFVGDFFAIEANGPRRLNKFPLAFVRAGK
Ga0208421_10085621	3300026058	Natural And Restored Wetlands	ANPRHEPQIGFDRVQSAEDRYLFGADGRLVYEVGHVFALQMHIVDKTHTRGLFLADFFAIEENGPRCLNKLPCEMVRAGS
Ga0209879_10136731	3300027056	Groundwater Sand	HDTGYDVYGGYLQGMLGANPRHEPQIGPDRPQSAEDRYLYDEQGRLVYKTGMMFTLQMHIIDKQETRGLFLADSFVVTANGPQCLNKFPPQLVRVAR
Ga0209982_10327662	3300027552	Arabidopsis Thaliana Rhizosphere	LQGMLGANPRHEPQIGFDRVQSAEDRYLFSADGRLVYEVGHVFALQMHIVDKTHTRGLFLADFFAIEENGPRCLNKFPCELVRTRR
Ga0209970_10756711	3300027614	Arabidopsis Thaliana Rhizosphere	NPRHEPQIGFDRVQSAEDRYLFSADGRLVYEVGHVFALQMHIVDKTHTRGLFLADFFAIEENGPRCLNKFPCELVRTRR
Ga0209966_10619692	3300027695	Arabidopsis Thaliana Rhizosphere	DRVQSAEDRYLFSADGRLVYEVGHVFALQMHIVDKTHTRGLFLADFFAIEENGPRCLNKFPCELVRTRR
Ga0299907_110391502	3300030006	Soil	GGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFDSDGRLVYQPGHVFTVQMHIVDKSHTRGLFVGDFFVIETSGPRCLNKLPLQFVRTRN
Ga0335085_109880001	3300032770	Soil	YGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFGPDGRLVYEVGHVFALQMHIVDKQHTRGLFLADFFAIEEGGPRCLNKLPPEMVRVKG
Ga0214472_115798492	3300033407	Soil	DYEFYGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLYGPDGKLVYQVGHVFTLQMHIVDKKHTRGLFLADFFAIEENGPRCLNKFPPQLVRTRRKGAG
Ga0316601_1022483631	3300033419	Soil	HEPQIGFDRVQSAEDRYLFDADGRLVYQAGHVFTLQMHIVDKSHTRGLFLGDFFAIEKDGPRCLNKFPVELVRTRR
Ga0326723_0287483_4_255	3300034090	Peat Soil	MLGANPRHEPQIGPDRPQSAEDRYLYDEQGRLVYKTGMMFTLQMHIIDKLETRGLFLADSFVVTPNGPKCLNKFPPQLVQVGR
Ga0364925_0061194_2_280	3300034147	Sediment	FYGGFLQGMLGANPRHEPQIGFDRIQSSEDRFLYGPDGRLVYQVGHVFTLQMHIVDKRHTRGLFVGDFFAIEEKGPRCLNKFPPQIVRTVRH
Ga0364925_0202257_470_721	3300034147	Sediment	MLGANPRHEPQIGFDRVQSAEDRFLFGADGRLVYQVGHVFALQMHIVDKQHTRGLFLADFFAIEANGPRCLNKFPVELVRTGR
Ga0364942_0065159_897_1148	3300034165	Sediment	MLGANPRHEPQIGFDRVQSAEDRYLFGADGKLVYHVGHVFTLQMHIVDQQHTRGLFLGDFFAIEANGPRCLNKFPPEWVRARS
Ga0364942_0232392_286_537	3300034165	Sediment	MLGANPRHEPQIGFDRVQSAEDRYLFGADGKLVYQVGHVFTLQMHIVDKQHTRGLFLGDFFAIEAKGPRCLNKFPPELVRAGG
Ga0364931_0139088_354_605	3300034176	Sediment	MLGANPRHEPQIGFDRVQSAEDRYLFGADGKLVYQVGHVFTLQMHIVDKQHTRGLFLGDFFAIEANGPRCLNKFPPGLVRTRN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101965

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences