Metagenome / Metatranscriptome Family F098387

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098387
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	84 residues
Representative Sequence	MERERENYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVALLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT
Number of Associated Samples	46
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.16 %
% of genes near scaffold ends (potentially truncated)	23.30 %
% of genes from short scaffolds (< 2000 bps)	66.99 %
Associated GOLD sequencing projects	43
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.379 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand (59.223 % of family members)
Environment Ontology (ENVO)	Unclassified (59.223 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.757 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.02% β-sheet: 0.00% Coil/Unstructured: 53.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01261	AP_endonuc_2	13.59
PF00005	ABC_tran	12.62
PF00749	tRNA-synt_1c	7.77
PF14579	HHH_6	5.83
PF01336	tRNA_anti-codon	2.91
PF13732	DUF4162	2.91
PF02082	Rrf2	1.94
PF04892	VanZ	1.94
PF00589	Phage_integrase	0.97
PF01850	PIN	0.97
PF08668	HDOD	0.97
PF12698	ABC2_membrane_3	0.97
PF02774	Semialdhyde_dhC	0.97
PF10057	MpsC	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	7.77
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	1.94
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	1.94
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	1.94
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	1.94
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	1.94
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	1.94
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	1.94
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	1.94
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	0.97
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.38 %
Unclassified	root	N/A	12.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.38 %
Unclassified	root	N/A	12.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.38 %
Unclassified	root	N/A	12.62 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.44 %
Unclassified	root	N/A	12.62 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84.47 %
Unclassified	root	N/A	12.62 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	74.76 %
Unclassified	root	N/A	12.62 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	74.76 %
Unclassified	root	N/A	12.62 %

Name	Rank	Taxonomy	Distribution
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	15.53 %
Unclassified	root	N/A	12.62 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	4.85 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.94 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	12.62 %
Unclassified	root	N/A	12.62 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	4.85 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.94 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.94 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	12.62 %
Unclassified	root	N/A	12.62 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	4.85 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.94 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002548\|JGI24974J35850_1006182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1220	Open in IMG/M
3300010870\|Ga0102750_10967361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	715	Open in IMG/M
3300010878\|Ga0136899_10207140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	717	Open in IMG/M
3300010878\|Ga0136899_10507096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	502	Open in IMG/M
3300012042\|Ga0136627_1012385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3225	Open in IMG/M
3300012042\|Ga0136627_1284443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	527	Open in IMG/M
3300012043\|Ga0136631_10001726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7078	Open in IMG/M
3300012043\|Ga0136631_10002257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6269	Open in IMG/M
3300012043\|Ga0136631_10043767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1662	Open in IMG/M
3300012045\|Ga0136623_10000971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	9371	Open in IMG/M
3300012045\|Ga0136623_10093461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1313	Open in IMG/M
3300012091\|Ga0136625_1028134	Not Available	2070	Open in IMG/M
3300012091\|Ga0136625_1309271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	533	Open in IMG/M
3300012093\|Ga0136632_10141255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1109	Open in IMG/M
3300012093\|Ga0136632_10378169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	635	Open in IMG/M
3300012094\|Ga0136638_10020704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2486	Open in IMG/M
3300012184\|Ga0136610_1140053	Not Available	842	Open in IMG/M
3300012184\|Ga0136610_1282616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	566	Open in IMG/M
3300012185\|Ga0136619_10068438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1363	Open in IMG/M
3300012185\|Ga0136619_10125359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	983	Open in IMG/M
3300012185\|Ga0136619_10289496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	621	Open in IMG/M
3300012185\|Ga0136619_10365487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	548	Open in IMG/M
3300012185\|Ga0136619_10382019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	535	Open in IMG/M
3300012187\|Ga0136622_10014727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	3318	Open in IMG/M
3300012187\|Ga0136622_10264140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	722	Open in IMG/M
3300012188\|Ga0136618_10007456	Not Available	4746	Open in IMG/M
3300012188\|Ga0136618_10010391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4086	Open in IMG/M
3300012188\|Ga0136618_10170066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	952	Open in IMG/M
3300012526\|Ga0136637_1085611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1090	Open in IMG/M
3300012526\|Ga0136637_1131125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	867	Open in IMG/M
3300012526\|Ga0136637_1311315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	545	Open in IMG/M
3300012527\|Ga0136633_1003241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10787	Open in IMG/M
3300012527\|Ga0136633_1004762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8468	Open in IMG/M
3300012527\|Ga0136633_1017694	Not Available	3622	Open in IMG/M
3300012527\|Ga0136633_1209159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	728	Open in IMG/M
3300012529\|Ga0136630_1005660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5084	Open in IMG/M
3300012529\|Ga0136630_1022642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2437	Open in IMG/M
3300012531\|Ga0136640_10080243	Not Available	1453	Open in IMG/M
3300012531\|Ga0136640_10106135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1247	Open in IMG/M
3300012678\|Ga0136615_10000032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	47603	Open in IMG/M
3300012678\|Ga0136615_10042013	All Organisms → cellular organisms → Bacteria	2324	Open in IMG/M
3300012679\|Ga0136616_10008162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5435	Open in IMG/M
3300012679\|Ga0136616_10377197	Not Available	644	Open in IMG/M
3300012680\|Ga0136612_10297663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	819	Open in IMG/M
3300012680\|Ga0136612_10476887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	633	Open in IMG/M
3300012681\|Ga0136613_10120151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1503	Open in IMG/M
3300012681\|Ga0136613_10188084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1169	Open in IMG/M
3300012684\|Ga0136614_10023840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4515	Open in IMG/M
3300012684\|Ga0136614_10051831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3099	Open in IMG/M
3300012684\|Ga0136614_10071454	Not Available	2628	Open in IMG/M
3300012684\|Ga0136614_10416711	Not Available	980	Open in IMG/M
3300017787\|Ga0183260_10016881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	5590	Open in IMG/M
3300017787\|Ga0183260_10018695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5293	Open in IMG/M
3300017787\|Ga0183260_10467116	Not Available	828	Open in IMG/M
3300017787\|Ga0183260_10690485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	647	Open in IMG/M
3300017787\|Ga0183260_10690486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	647	Open in IMG/M
3300017787\|Ga0183260_10815822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	583	Open in IMG/M
3300017789\|Ga0136617_10001583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	20182	Open in IMG/M
3300017789\|Ga0136617_10033769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4555	Open in IMG/M
3300017789\|Ga0136617_10141151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2061	Open in IMG/M
3300017789\|Ga0136617_10322233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1266	Open in IMG/M
3300017789\|Ga0136617_10735712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	763	Open in IMG/M
3300017789\|Ga0136617_10963271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	649	Open in IMG/M
3300017789\|Ga0136617_10975324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	644	Open in IMG/M
3300017789\|Ga0136617_11478793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	506	Open in IMG/M
3300018422\|Ga0190265_10221743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1919	Open in IMG/M
3300018422\|Ga0190265_12555251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	609	Open in IMG/M
3300018432\|Ga0190275_10063803	All Organisms → cellular organisms → Bacteria	3131	Open in IMG/M
3300018432\|Ga0190275_10200351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1888	Open in IMG/M
3300018432\|Ga0190275_10243585	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1730	Open in IMG/M
3300018432\|Ga0190275_10666575	Not Available	1094	Open in IMG/M
3300018432\|Ga0190275_11267025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	813	Open in IMG/M
3300018432\|Ga0190275_11393746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	778	Open in IMG/M
3300018432\|Ga0190275_12099375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	644	Open in IMG/M
3300018432\|Ga0190275_12582944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	585	Open in IMG/M
3300018465\|Ga0190269_10877950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	658	Open in IMG/M
3300018466\|Ga0190268_11584834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	575	Open in IMG/M
3300019767\|Ga0190267_10003403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3950	Open in IMG/M
3300020181\|Ga0196958_10152690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	798	Open in IMG/M
3300024426\|Ga0196960_10105233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	847	Open in IMG/M
3300027618\|Ga0208736_1000720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	9113	Open in IMG/M
3300027618\|Ga0208736_1005524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3182	Open in IMG/M
3300027618\|Ga0208736_1006865	Not Available	2864	Open in IMG/M
3300027618\|Ga0208736_1008679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2558	Open in IMG/M
3300027618\|Ga0208736_1035934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1247	Open in IMG/M
3300027638\|Ga0208612_1096456	Not Available	771	Open in IMG/M
3300028003\|Ga0247707_1008356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1006	Open in IMG/M
3300028040\|Ga0247704_1037944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	712	Open in IMG/M
3300028554\|Ga0302047_10145909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	715	Open in IMG/M
3300028578\|Ga0272482_10027187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1456	Open in IMG/M
3300031091\|Ga0308201_10326994	Not Available	555	Open in IMG/M
3300031152\|Ga0307501_10101142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	729	Open in IMG/M
3300031164\|Ga0307502_10000072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	26332	Open in IMG/M
3300031164\|Ga0307502_10000808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7949	Open in IMG/M
3300031164\|Ga0307502_10019604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1159	Open in IMG/M
3300031164\|Ga0307502_10124564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	558	Open in IMG/M
3300031716\|Ga0310813_11856982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	567	Open in IMG/M
3300033475\|Ga0310811_10195013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2482	Open in IMG/M
3300033988\|Ga0334909_015093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	998	Open in IMG/M
3300034009\|Ga0334944_077350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	629	Open in IMG/M
3300034009\|Ga0334944_097649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	555	Open in IMG/M
3300034377\|Ga0334931_138500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	582	Open in IMG/M
3300034391\|Ga0334917_006448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1668	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	66.02%
Terrestrial	Environmental → Terrestrial	33.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	66.02%
Soil	Environmental → Terrestrial → Soil	33.98%

Habitat	Taxonomy	Distribution
Ice	Environmental → Aquatic → Freshwater → Ice	66.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.07%
Sand	Environmental → Terrestrial → Soil → Sand	1.94%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	66.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.33%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.88%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.94%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.97%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	59.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.33%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.97%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002548	Polar desert microbial communities from Antarctic Dry Valleys - UQ255	Environmental	Open in IMG/M
3300010870	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010878	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (version 7)	Environmental	Open in IMG/M
3300012042	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ489 (22.06)	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012184	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ134 (22.06)	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012526	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ857 (21.06)	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300012531	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300024426	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5	Environmental	Open in IMG/M
3300027618	Polar desert microbial communities from Antarctic Dry Valleys - UQ255 (SPAdes)	Environmental	Open in IMG/M
3300027638	Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes)	Environmental	Open in IMG/M
3300028003	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-2-E_N	Environmental	Open in IMG/M
3300028040	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-1-W_N	Environmental	Open in IMG/M
3300028554	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (v9)	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033988	Soil microbial communities from Mojave Desert, California, United States - 5NOC	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034391	Biocrust microbial communities from Mojave Desert, California, United States - 13HMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24974J35850_10061822	3300002548	Polar Desert	MTSVRETYDLPKRPPVPFRQYALMLVFPIASLALWFALPDSPITVALLAIAVLVTVFVGVGMIVRSRGLDEKPGREPVTTPSSENG*
Ga0102750_109673611	3300010870	Soil	PKRPPLPFRQAIVMFLVVVLALVLWLALPDSPITVGLLAITLLACVFVGVGAVLRSRELDEKPGRNPVTPPSVDRS*
Ga0136899_102071401	3300010878	Soil	LPKRPPLPFRQAAVMVAFVVLALVLWLLLPNSAIAVAFLAIVLLAAVFIGVGSVLRSRELDEKPGRNPVTPPSVDRS*
Ga0136899_105070962	3300010878	Soil	PKRPPLPFRQAIVMFLVVVLALVLWLALPDSPITVGLLAITLLACVFVGVGAVLRSRELDEKPGRTPVTPPSVDRS*
Ga0136627_10123852	3300012042	Polar Desert Sand	MRSVRETYDLPKHPPLPFRQIALMLVIPALALGLWLVLPDSPITVALLAVSIFAAVFGGVTLVLRSRRTSEAPGRHPITPPSVDP*
Ga0136627_12844431	3300012042	Polar Desert Sand	MTSLREDYDLPKRPPLPFRQASLMFAVVLLALGGWLLLPDSPFSVALLAIALLAAVFVGVGMVLRSRELDKKPGRNPAPPPSTDT*
Ga0136631_100017268	3300012043	Polar Desert Sand	MDPVRETYDLPERPPTPFRQWAVMLAVPALALGLWLVLPDSPITVALLAIAVLVAVFVGVGMVLRSRELKEKPGRNPVTPPSVDRS*
Ga0136631_100022571	3300012043	Polar Desert Sand	MPRERENYDLPKKPPLPFRQAAVMFGAVVLALGLWFLLPSSPIVVALIAVIVLAAVFLGVGAVLKSPELDEKPGRNPVTPPSIDT*
Ga0136631_100437673	3300012043	Polar Desert Sand	RMERERENYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT*
Ga0136623_100009713	3300012045	Polar Desert Sand	MPSVRETYDLPKRPPLAFKQFALMAAFPLAALVLWLLLPDSPITVALLAIAVLVAVFVGVGMILRTRGLDKEPGRDPVTPPSVEND*
Ga0136623_100934612	3300012045	Polar Desert Sand	MERERKNYDLPKRPPLPFRQAAVMFTVIVLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT*
Ga0136625_10281342	3300012091	Polar Desert Sand	MERERENYDLPKRPPLPFRQAAVMFTVIVLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT*
Ga0136625_13092711	3300012091	Polar Desert Sand	MPKERENYDLPKRPPLPFRQAVVMFGAVVLALGLWFLLPNSPIVVALIAIIVLAAVFTGVGLVLRSKELDEKPGRNPVTPPSIDT*
Ga0136632_101412551	3300012093	Polar Desert Sand	RPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT*
Ga0136632_103781692	3300012093	Polar Desert Sand	MPSVRETYDLPKRPPLPFKQFALMAAFPLAALVLWLLLPDSVITVALLAISLLVAVFLGVGMILRTRGLDKEPGRDPVTPPSVEND*
Ga0136638_100207041	3300012094	Polar Desert Sand	MERERENYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVALLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT*
Ga0136610_11400531	3300012184	Polar Desert Sand	MERERENYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT*
Ga0136610_12826162	3300012184	Polar Desert Sand	MPSVRESYDLPKRPPLPFKQFALMAAFPLAALVLWLLLPDSVITVALLAISLLVAVFLGVGMILRTRGLDKEPGRDPVTPPSVEND*
Ga0136619_100684383	3300012185	Polar Desert Sand	MERERKNYDLPKRPPLPFRQAAVMFTVIVLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTP
Ga0136619_101253591	3300012185	Polar Desert Sand	MERERKNYDLPKRPPLPFRQAAVMFAAIVLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT*
Ga0136619_102894961	3300012185	Polar Desert Sand	KRPPLPFRQAALMIAFVVLALGAWLLLPSSPITVGLLAIALLAVVFLGVGTVLRSRELDEKPGRNPVTPPSVDT*
Ga0136619_103654871	3300012185	Polar Desert Sand	MPRERENYDLPKRPPLPFRLAAVMFGAILLALGLWFVLPSSPIVVALIAVIVLAAVFTGVGLVLRSKELDEKPGRNPVTPPSIDT*
Ga0136619_103820191	3300012185	Polar Desert Sand	TYDLPKRPPLPFRQIVVMLAIPLAALALWLALPSSPITVALLAIFLLVAVFMGVGIVLRSRELDQKPDREPVTPPSVEQG*
Ga0136622_100147272	3300012187	Polar Desert Sand	MSSRLRVVGNKRDMPSVRESYDLPKRPPLPFKQFALMAAFPLAALVLWLLLPDSVITVALLAISLLVAVFLGVGMILRTRGLDKEPGRDPVTPPSVEND*
Ga0136622_102641402	3300012187	Polar Desert Sand	PFKQFALMAAFPLAALVLWLLLPDSPITVALLAIAVLVAVFAGVGMILRTRGLDKEPGRDPVTPPSVEKD*
Ga0136618_100074562	3300012188	Polar Desert Sand	MTSVRETYDLPKRPPVPFRQYALMLVFPIAALALWFALPDSPITVALLAIAVLVTVFVGVGMIVRSRGLDEKPGREPVTTPSSENG*
Ga0136618_100103911	3300012188	Polar Desert Sand	MKRERENYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT*
Ga0136618_101700661	3300012188	Polar Desert Sand	MPSVRETYDLPKRPPLPFKQFALMAAFPLAALVLWLLLPDSPVTVALLAISLLVAVFMGVGMILRTRGLDKEPGRDPVTPPSVEKD*
Ga0136637_10856111	3300012526	Polar Desert Sand	MKRERENYDLPKRPPLPFRLAAVMLAVIVLALGLWLLLPNSPFSVAFLAIVLLATVFTGVGLVLRSRELDKEPGRNPVTPPSIDT*
Ga0136637_11311251	3300012526	Polar Desert Sand	MRSVRETYDLPKHPPLPFRQMALMLVVPALALGLWLVLPDSPITVALLAVSIFAAVFGGVTLVLRSRRTSEAPGRHPITPPSVDS*
Ga0136637_13113151	3300012526	Polar Desert Sand	MERERKNYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT*
Ga0136633_10032413	3300012527	Polar Desert Sand	MDRERKNYDLPKRPPLPFRQAAVMFTVVLLALGLWLLLPSSPFSVAFLAIVLLAVVFIGVGSVLRSRELDEKPGRNPVTPPSIDT*
Ga0136633_10047626	3300012527	Polar Desert Sand	MTHLRDDYDLPKRPPLPFRLAALMIAVVVLALGGWLLLPSSPITVALLAIVLLVTVFDGIGTVLRSRELDEKPGRNPVKPPSMDT*
Ga0136633_10176944	3300012527	Polar Desert Sand	MERERENYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVAFLAIVLLATVFTGVGLVLRSRELDEQPGRNPVTPPSIDT*
Ga0136633_12091591	3300012527	Polar Desert Sand	MTHLRDDYDLPKRPPLPFRLAALMIAVVVLALGGWLLLPSSPITVALLAIVLLVTVFVGVGTVLSSRGLDEKPGRNPVTPPSMDT*
Ga0136630_10056604	3300012529	Polar Desert Sand	MPSVRETYDLPKRPPLPFKQFALMASFPLAALVLWLLLPDSPVTVALLAISLLVAVFMGVGMILRTRGLDKEPGRDPVTPPSVEKD*
Ga0136630_10226423	3300012529	Polar Desert Sand	MERERKNYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVAFLAIELLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT*
Ga0136640_100802432	3300012531	Polar Desert Sand	MPSVRETYDLPKRPPLPFKQFALMAAFPLAALVLWLLLPDSPITVALLAIAVLVAVFAGVGMILRTRGLDKEPSRDPVTPPSVEKD*
Ga0136640_101061352	3300012531	Polar Desert Sand	MPSVRETYDLPKRPPLPFKQFALMASFPLAALVLWLLLPHSAITVALLAISVLVAVFMGVGMILRTRGLDKQPGRDPVTPPSVEND*
Ga0136615_1000003215	3300012678	Polar Desert Sand	MTNLREDYDLPKRPPLPFRQAALMIAFVVLALGAWLLLPSSPITVGLLAIALLAVVFLGVGTVLRSRELDEKPGRNPVTPPSVDT*
Ga0136615_100420132	3300012678	Polar Desert Sand	MPKERENYDLPKRPPLPFRQAAVMFGAVVLALGLWFLLPSSPIVVALIAIIVLAAVFTGVGLVMSSKELDEKPGRNPVTPPSIDT*
Ga0136616_100081622	3300012679	Polar Desert Sand	MERERENYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSLDDT*
Ga0136616_103771971	3300012679	Polar Desert Sand	MPSVRETYDLPKRPPLPFKQFALMAAFPLAALVLWLLLPDSPITVALLAIAVLVAVFAGVGMILRTRGLNKEPGRDPVTPPSVEKD*
Ga0136612_102976632	3300012680	Polar Desert Sand	MTSVRETYDLPKRPPVPFRQYALMLALPVVALVLWLLLPDSPITVALLAIALLVTVFVGVGMIVRSRGLDEKPSREPVTTPSSENG*
Ga0136612_104768872	3300012680	Polar Desert Sand	MTSVRETYDLPKRPPVPFRQYALMLALPVVALVLWLLLPDSPITVALLAIALLVTVFVGVGMIVRSRALDEKPTREPVTTPSSENG*
Ga0136613_101201513	3300012681	Polar Desert Sand	MPSVRETYDLPKRPPLPFKQFALMASFPLAALVLWLLLPDSPVTVALLAISLLVAVFMGVGMILRTRGLDKEPGRDPVTPPSVEND*
Ga0136613_101880842	3300012681	Polar Desert Sand	MERERENYDLPKRPPLPFRQAAVMFTVILLALGLWLLLPNSPISVAFLAIVLLAAVFTGVGFVLRSRELDKKPGRNPVTPPSIDT*
Ga0136614_100238407	3300012684	Polar Desert Sand	MTDLRDDYDLPKKPPLPFRQAAVMFTVVLLALVGWLLLPNSPFAVALLAVVLLGTVFVGVGMVLRSRELDKKPGRNPVPPPSVDT*
Ga0136614_100518313	3300012684	Polar Desert Sand	MRSVRETYGLPKRPPLAFKQFALMAAFPLAALALWLLLPDSPITVALLAIAVLVAVFVGVGMILRTRGLDKEPGRDPVTPPSVEND*
Ga0136614_100714543	3300012684	Polar Desert Sand	MTNLREDYDLPKRPPLPFRQAALMITFVVLALGAWLLVPNSPIAVGLLAITLLAVVFLGVGRILSSRELDEKPGRNPVTPPSIDT*
Ga0136614_104167111	3300012684	Polar Desert Sand	MKRERENYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNAPFSVAFLAIVLLATVFTGGGLVLRSRELDEQPGRN
Ga0183260_100168811	3300017787	Polar Desert Sand	MPKERENYDLPKRPPLPFRLAVVMFGAVVLALGLWFLLPSSPIVVALIAIIVLAAVFTGVGLVMSSKELDEKPGRNPVTPPSIDT
Ga0183260_100186953	3300017787	Polar Desert Sand	MPSVRETYDLPKRPPLAFKQFALMAAFPLAALVLWLLLPDSPITVALLAIAVLVAVFVGVGMILRTRGLDKEPGRDPVTPPSVEND
Ga0183260_104671162	3300017787	Polar Desert Sand	MERERKNYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT
Ga0183260_106904851	3300017787	Polar Desert Sand	MAKERESYDLPKRPPLPFRLAVVMFGAVVLALGLWFLLPNSPIVVALIAVIVLAAVFTGVGLVLRSKELDEKPGRNPVTPPSI
Ga0183260_106904861	3300017787	Polar Desert Sand	MAKERESYDLPKRPPLPFRQAVVMFGAVVLALGLWFLLPNSPVVVALIAVIVLAAVFTGVGLVLRSKELDEKPGRNPVTPPSI
Ga0183260_108158222	3300017787	Polar Desert Sand	MDPVRETYDLPERPPTPFRQWAVMLAVPALALGLWLVLPDSPITVALLAIAVLVAVFVGVGMVLRSRELEEKPG
Ga0136617_1000158315	3300017789	Polar Desert Sand	MTQLREDYDLPERPPLPFRQALVMVALPVIALGLWLALPDSPITVALLAVAVLVAVFAGVGLVLRSRELDEKPGRKPVTPPSVDT
Ga0136617_100337694	3300017789	Polar Desert Sand	MTNLREDYDLPKRPPLPFRQAALMIAFVVLALGAWLLLPSSPITVGLLAIALLAVVFLGVGTVLRSRELDEKPGRNPVTPPSVDT
Ga0136617_101411512	3300017789	Polar Desert Sand	MTDLRDDYDLPKKPPLPFRQAAVMFTVVLLALVGWLLLPNSPFAVALLAVVLLGTVFVGVGMVLRSRELDKKPGRNPVPPPSVDT
Ga0136617_103222332	3300017789	Polar Desert Sand	MPSVRETYDLPKRPPLPFKQFALMASFPLAALVLWLLLPDSVITVALLAISLLVAVFMGVGMILRTRGLDKQPGRDPVTPPSVEND
Ga0136617_107357121	3300017789	Polar Desert Sand	MPSVRETYDLPKRPPLPFKQFALMAAFPLAALVLWLLLPDSPVTVALLAISLLVAVFMGVGMILRTRGLDKEPGRHPVTPPSVEKD
Ga0136617_109632712	3300017789	Polar Desert Sand	YDLPKRPPLPFKQFALMAAFPLAALVLWLLLPDSPITVALLAIAVLVAVFLGVGMILRTRGLDKEPSRDPVTPPSVEND
Ga0136617_109753241	3300017789	Polar Desert Sand	KRPPLPFRQAAVMFIIVLAAIGLWLAIPDSPITVALLAITLLAAVFIGVGTVLRSRELDEKPGRNPVTPPSAEKG
Ga0136617_114787931	3300017789	Polar Desert Sand	MERERENYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT
Ga0190265_102217432	3300018422	Soil	VRGTQATMPRERENYDLPKRPPLPFRQAAVMFGAIVLALGLWFLLPNSPIVVALIAVIVLAGVFLGVGAVLRSKELDEKPGRNPVTPPSIDT
Ga0190265_125552512	3300018422	Soil	MTSLREDYDLPKRPPLPMRQAVVMFALPLLALGLWLVLPDSPITVGLLAVALLVAVFVGVGTVLRSRELTEKPGRNPVTPPSIDSQ
Ga0190275_100638035	3300018432	Soil	MEKERENYDLPRRPPLPFRQAAVMAGAVVLALGLWFVLPSSPIVVALIAVIVLAAVFTGVAAVLRSKELDEKPGRNPVTPPSIDP
Ga0190275_102003513	3300018432	Soil	MQRERENYDLPKRPPLPFRQAAVMFAVILLALGLWLLLPNSPIAVGFLAIVVLAAVFVGVGSVLRSRELDEKPGRNPVTPPSIDT
Ga0190275_102435852	3300018432	Soil	MSTETPRERENYDLPKRPPLPFRQAAVMFGAVLLALGLWFVLPSSPIVVVLVAVIVLAAVFIGVGGVLRSRELDEKPGRNPVTPPSIDT
Ga0190275_106665751	3300018432	Soil	MQRERENYDLPKRPPLPFRQAAVMFAVILLALGLWLLLPNSPFAVGFLAIVVLTAVFVGVGSVLRSRELDEKPGRNPVTPPSIDT
Ga0190275_112670252	3300018432	Soil	VGYWARMDRERENYDLPKRPPLPFRQAAVMFTVVLLALGLWLLLPSSPFAVAFLAIVLLAVVFIGVGSVLRSRELDEKPGRNPVTPPSIDT
Ga0190275_113937462	3300018432	Soil	MTSLREDYDLPKRPPLPMRQAVVMFALPLLALGLWLALPDSPITVGLLAVALLVAVFVGVGTVLRSRELTEKPGRNPVTPPSIDSQ
Ga0190275_120993752	3300018432	Soil	MTNLREDYDLPQRPPLPFRQAALMGAFVVIALGAWLLVPNSAISVGLLAIALLAVVFVGVGAVLRSRELDEKPGRNPVTPPSIDNN
Ga0190275_125829441	3300018432	Soil	TPRERENYDLPKKPPLPFRQAAVMFGAVVLALGLWFVLPSSPIVVALIAVIVLTAVFLGVGAVLKSRELDEKPGRNPVTPPSIDT
Ga0190269_108779502	3300018465	Soil	MPSETPRERENYDLPKKPPLPFRQAAVMFTVAALALVGWLVLPNSALSVALLAIALLAAVFAGVGLVLRSRELDQKPGRNPVTPPSIDT
Ga0190268_115848343	3300018466	Soil	KKPPLPFRQAAVMFTVVALALVGWLLLPNSPLSVALLAVALLAAVFVGVGLVLRSRELDKKPGRNPVPPPSMDT
Ga0190267_100034031	3300019767	Soil	MDSVRESYDLPKRPPLPLRQIAVMLTVLAAALILWLVIPDSPISVALLAIALLATVFIGVGMVLRSRELNEKPGRNPVPPPSTDT
Ga0196958_101526902	3300020181	Soil	MTPELPRERENYDLPKRPPLPFRQAAVMFGAVVLALGLWFVLPNSPIVVALIAVIVLAGVFLGVGAVLRSKELDEKP
Ga0196960_101052332	3300024426	Soil	VGYAASMSPEMPRERENYDLPRRPPLPFRQAAVMFGAIVLALGLWFVLPNSPIVVALIAVIVLAAVFLGVGAVLRSKELDEKPGRNPVTPPSIDT
Ga0208736_10007206	3300027618	Polar Desert	MTSVRETYDLPKRPPVPFRQYALMLVFPIASLALWFALPDSPITVALLAIAVLVTVFVGVGMIVRSRGLDEKPGREPVTTPSSENG
Ga0208736_10055244	3300027618	Polar Desert	MPSVRETYDLPKRPPLPFKQFALMAAFPLAALVLWLLLPDSPITVALLAIAVLVAVFAGVGMILRTRGLDKEPGRDPVTPPSVEKD
Ga0208736_10068652	3300027618	Polar Desert	MERERENYDLPKRPPLPFRQAAVMFAVIVLALGLWLLLPNSPFSVAFLAIVLLATVFTGVGLVLRSRELDKEPGRNPVTPPSIDT
Ga0208736_10086792	3300027618	Polar Desert	MPRERENYDLPKRPPLPFRLAAVMFGAILLALGLWFVLPSSPIVVALIAVIVLAAVFTGVGLVLRSKELDEKPGRNPVTPPSIDT
Ga0208736_10359342	3300027618	Polar Desert	MSSRLRVVGNKRDMPSVRESYDLPKRPPLPFKQFALMAAFPLAALVLWLLLPDSVITVALLAISLLVAVFLGVGMILRTRGLDKEPGRDPVTPPSVEND
Ga0208612_10964561	3300027638	Polar Desert	MERERENYDLPKRPPLPFRQAVVMFGAVVLALGLWFVLPNSPIVVALIAIIVLAAVFTGVGLVLRSKELDEKPGRNPVTPPSIDT
Ga0247707_10083562	3300028003	Soil	MTDLREDYDLPRKPPLPFRQAAVMCTVVVLALAGWLLLPSSPITVALLAVALLAAVFFGVGAVLRSRELDEKPGRDPVTPPSVDRG
Ga0247704_10379442	3300028040	Soil	MPREREHYDLPKRPPLPFRQAAVMFGAVVLALGLWFVLPNSPIVVALIAVIVLTGVFLGVGAVLRSKELDEKPGRNPVTPPSIDT
Ga0302047_101459091	3300028554	Soil	PKRPPLPFRQAIVMFLVVVLALVLWLALPDSPITVGLLAITLLACVFVGVGAVLRSRELDEKPGRNPVTPPSVDRS
Ga0272482_100271872	3300028578	Soil	MTQLRKDYDLPERPPLPFRQAIVMIALPVIALGLWLAVPDSPITVALLAVAVLAAVFVGVGLVLRSRELDEQPGRHPVTPPSVDT
Ga0308201_103269941	3300031091	Soil	ERPPTPFRQWAVMLAVPALALGLWLALPDSPITVAVLAIAVLVAVFLGVGLVLRSRELKEKPGRHPVTPPSVDRS
Ga0307501_101011421	3300031152	Soil	PPLPFRQAIVMFAVPLLALVLWLVLPDSPITVALLAIALLAAVFTGVGLVLRSRELDEKPGRNPVPPPSVDT
Ga0307502_1000007210	3300031164	Soil	MDSVRETYELPKRPPTPFRQWVVMLVVPALALGLWLALPDSPITVALLAIAVLAAVFVGVGMVMRSRELEEKPGRQPVTPPSVDRS
Ga0307502_100008082	3300031164	Soil	MTQLREDYDLPERPPLPFRQAIVMFAVPLLALVLWLVLPDSPITVALLAIALLAAVFTGVGLVLRSRELDEKPGRNPVPPPSVDT
Ga0307502_100196042	3300031164	Soil	MTNLREDYDLPERPPLPFRQAIVMIALPVIALGLWLAVPDSPITVALLAVAVLAAVFVGVGLVLRSRELDEKPGRHPVTPPSVDT
Ga0307502_101245642	3300031164	Soil	MTQLREDYDLLERPPLPFRQAIVMFAVPLLALVLWLLLPDSPITVALLAITLLAAVFTGVGLVLRSRELDEKPGRNPVPPPSADSS
Ga0310813_118569821	3300031716	Soil	SGRPPGMQRERQNYDLPKRPQLPFRQAAVMFAVVLLALGLWLILPNSPLAVAFLGIVLLAAVFIGVGMVLKSRELDSKPGRNPVPPPSIDT
Ga0310811_101950132	3300033475	Soil	MARERRNYDLPKRPPLPFRQAVVMFAAVLLALALWFFLPNSAIVVGLIAVIMLAVVFTGVGLVLRSPELDEKPGRNPVTPPSIDT
Ga0334909_015093_578_838	3300033988	Soil	MDSVRETYDLPKRPPTPFRQWAVMLAVPVLALGLWLALPDSPITVALLAIAVLAAVFVGVGMVLRSRDLEEKPGRNPVTPPSVDRS
Ga0334944_077350_314_571	3300034009	Sub-Biocrust Soil	MTELREDYDLPRKPPLPFRQAALMCAVVVAALAGWLLLPNSPFSVALLAVALLAGVFIGVGAVLRSRELDEKPGRNPVTPPSIDT
Ga0334944_097649_189_446	3300034009	Sub-Biocrust Soil	MQRERENYDLPKRPPLPFRQAAVMFTVVLLALGLWLLLPNSPFSVAFLAIVLLAAVFTGVGLVLRSRELDKKPGRNPVTPPSIDT
Ga0334931_138500_77_334	3300034377	Sub-Biocrust Soil	MTNLREDYDLPKRPPLPFRQAALMIAFVVLALGAWLLLPSSPITVGLLAIALLAVVFFGVGTVLRSRELDEKPGRNPVTPPSVDT
Ga0334917_006448_1_252	3300034391	Hypolithic Biocrust	MDSVRETYDLPKRPPTPFRQWAVMLAVPVLALGLWLALPDSPITVALLAIAVLAAVFVGVGMVLRSRDLEEKPGRQPVTPPSVD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098387

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences