NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F098376

Metagenome Family F098376

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098376
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 42 residues
Representative Sequence MAGIRTLATAILQKTNCQNKKAQLENFSDDFDNLIITLKTMNFL
Number of Associated Samples 31
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 19.42 %
% of genes near scaffold ends (potentially truncated) 47.57 %
% of genes from short scaffolds (< 2000 bps) 84.47 %
Associated GOLD sequencing projects 29
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.233 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand
(89.320 % of family members)
Environment Ontology (ENVO) Unclassified
(89.320 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(94.175 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.22%    β-sheet: 0.00%    Coil/Unstructured: 52.78%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF01609DDE_Tnp_1 28.43
PF13808DDE_Tnp_1_assoc 5.88
PF13470PIN_3 0.98
PF00583Acetyltransf_1 0.98
PF12680SnoaL_2 0.98
PF00903Glyoxalase 0.98
PF17189Glyco_hydro_30C 0.98
PF13589HATPase_c_3 0.98
PF00486Trans_reg_C 0.98
PF02371Transposase_20 0.98
PF12770CHAT 0.98
PF00266Aminotran_5 0.98
PF00872Transposase_mut 0.98
PF14696Glyoxalase_5 0.98
PF00589Phage_integrase 0.98
PF13517FG-GAP_3 0.98
PF00144Beta-lactamase 0.98
PF01381HTH_3 0.98
PF13460NAD_binding_10 0.98
PF13613HTH_Tnp_4 0.98
PF03740PdxJ 0.98
PF07676PD40 0.98
PF13424TPR_12 0.98
PF00999Na_H_Exchanger 0.98
PF09424YqeY 0.98
PF01488Shikimate_DH 0.98
PF00483NTP_transferase 0.98
PF04014MazE_antitoxin 0.98
PF00056Ldh_1_N 0.98
PF07994NAD_binding_5 0.98
PF01791DeoC 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 28.43
COG3293TransposaseMobilome: prophages, transposons [X] 28.43
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 28.43
COG5421TransposaseMobilome: prophages, transposons [X] 28.43
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 28.43
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 28.43
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 0.98
COG0039Malate/lactate dehydrogenaseEnergy production and conversion [C] 0.98
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 0.98
COG0854Pyridoxine 5'-phosphate synthase PdxJCoenzyme transport and metabolism [H] 0.98
COG1260Myo-inositol-1-phosphate synthaseLipid transport and metabolism [I] 0.98
COG1486Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolaseCarbohydrate transport and metabolism [G] 0.98
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.98
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.98
COG2367Beta-lactamase class ADefense mechanisms [V] 0.98
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 0.98
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 0.98
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.98
COG3547TransposaseMobilome: prophages, transposons [X] 0.98
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 0.98

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.23 %
UnclassifiedrootN/A7.77 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002548|JGI24974J35850_1003907All Organisms → cellular organisms → Bacteria1579Open in IMG/M
3300002548|JGI24974J35850_1023438All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300003322|rootL2_10254490All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1368Open in IMG/M
3300006041|Ga0075023_100035613All Organisms → cellular organisms → Bacteria1491Open in IMG/M
3300011244|Ga0137483_107086All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1107Open in IMG/M
3300012042|Ga0136627_1030217All Organisms → cellular organisms → Bacteria1981Open in IMG/M
3300012042|Ga0136627_1066795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1260Open in IMG/M
3300012043|Ga0136631_10072418All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1297Open in IMG/M
3300012045|Ga0136623_10066641All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae1572Open in IMG/M
3300012045|Ga0136623_10090823All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1333Open in IMG/M
3300012045|Ga0136623_10144606All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300012046|Ga0136634_10016615All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2488Open in IMG/M
3300012046|Ga0136634_10034487All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1777Open in IMG/M
3300012046|Ga0136634_10036297All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1736Open in IMG/M
3300012046|Ga0136634_10041980All Organisms → cellular organisms → Bacteria1628Open in IMG/M
3300012046|Ga0136634_10055514All Organisms → cellular organisms → Bacteria1434Open in IMG/M
3300012046|Ga0136634_10078366All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1224Open in IMG/M
3300012046|Ga0136634_10078440All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1224Open in IMG/M
3300012046|Ga0136634_10089623All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300012046|Ga0136634_10118135All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1012Open in IMG/M
3300012046|Ga0136634_10145661Not Available919Open in IMG/M
3300012046|Ga0136634_10166222All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300012046|Ga0136634_10252272All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes709Open in IMG/M
3300012046|Ga0136634_10261377Not Available698Open in IMG/M
3300012046|Ga0136634_10300552Not Available653Open in IMG/M
3300012046|Ga0136634_10340061All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium617Open in IMG/M
3300012046|Ga0136634_10340061All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium617Open in IMG/M
3300012046|Ga0136634_10361232All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium600Open in IMG/M
3300012046|Ga0136634_10442272Not Available547Open in IMG/M
3300012046|Ga0136634_10486594All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300012092|Ga0136621_1134600All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium994Open in IMG/M
3300012093|Ga0136632_10074073All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1573Open in IMG/M
3300012093|Ga0136632_10099481All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1346Open in IMG/M
3300012094|Ga0136638_10003693All Organisms → cellular organisms → Bacteria4808Open in IMG/M
3300012094|Ga0136638_10009534All Organisms → cellular organisms → Bacteria3378Open in IMG/M
3300012094|Ga0136638_10036806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1957Open in IMG/M
3300012094|Ga0136638_10045418All Organisms → cellular organisms → Bacteria1789Open in IMG/M
3300012094|Ga0136638_10050577All Organisms → cellular organisms → Bacteria1708Open in IMG/M
3300012094|Ga0136638_10092112All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1312Open in IMG/M
3300012094|Ga0136638_10112618All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1197Open in IMG/M
3300012094|Ga0136638_10283494All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium768Open in IMG/M
3300012185|Ga0136619_10063369All Organisms → cellular organisms → Bacteria1420Open in IMG/M
3300012185|Ga0136619_10262279All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium655Open in IMG/M
3300012186|Ga0136620_10114029All Organisms → cellular organisms → Bacteria → Acidobacteria1236Open in IMG/M
3300012188|Ga0136618_10018801Not Available3056Open in IMG/M
3300012188|Ga0136618_10059708All Organisms → cellular organisms → Bacteria1685Open in IMG/M
3300012188|Ga0136618_10108256All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1225Open in IMG/M
3300012188|Ga0136618_10192422All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium888Open in IMG/M
3300012526|Ga0136637_1000621All Organisms → cellular organisms → Bacteria8988Open in IMG/M
3300012529|Ga0136630_1157822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium823Open in IMG/M
3300012529|Ga0136630_1175211All Organisms → cellular organisms → Bacteria → Acidobacteria776Open in IMG/M
3300012529|Ga0136630_1338490All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300012531|Ga0136640_10041876All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2044Open in IMG/M
3300012531|Ga0136640_10408890All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300012679|Ga0136616_10082939All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1522Open in IMG/M
3300012679|Ga0136616_10471393All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300012679|Ga0136616_10552997All Organisms → cellular organisms → Bacteria → Proteobacteria523Open in IMG/M
3300012679|Ga0136616_10583140All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300012680|Ga0136612_10150642All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1183Open in IMG/M
3300012681|Ga0136613_10067511All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2046Open in IMG/M
3300012681|Ga0136613_10085978All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1801Open in IMG/M
3300012681|Ga0136613_10100293All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1658Open in IMG/M
3300012681|Ga0136613_10246365Not Available1000Open in IMG/M
3300012681|Ga0136613_10481030All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300012681|Ga0136613_10793330All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300012682|Ga0136611_10141005All Organisms → cellular organisms → Bacteria1674Open in IMG/M
3300012682|Ga0136611_10194929All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1382Open in IMG/M
3300012682|Ga0136611_10309543Not Available1040Open in IMG/M
3300012682|Ga0136611_10850832All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300012684|Ga0136614_10046038All Organisms → cellular organisms → Bacteria3289Open in IMG/M
3300012684|Ga0136614_10565755Not Available813Open in IMG/M
3300012684|Ga0136614_10767609All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300013097|Ga0136639_10317112All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300017695|Ga0180121_10013804All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2894Open in IMG/M
3300017695|Ga0180121_10060806All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1337Open in IMG/M
3300017695|Ga0180121_10113446All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium979Open in IMG/M
3300017695|Ga0180121_10280805All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium630Open in IMG/M
3300017695|Ga0180121_10329011All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium584Open in IMG/M
3300017695|Ga0180121_10342629All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium573Open in IMG/M
3300017787|Ga0183260_10054334All Organisms → cellular organisms → Bacteria2969Open in IMG/M
3300017787|Ga0183260_10060726All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2789Open in IMG/M
3300017787|Ga0183260_10088658All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2251Open in IMG/M
3300017787|Ga0183260_10164454All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1575Open in IMG/M
3300017787|Ga0183260_10359603All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium976Open in IMG/M
3300017787|Ga0183260_10511965All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium781Open in IMG/M
3300017787|Ga0183260_10909844All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300017789|Ga0136617_10024961All Organisms → cellular organisms → Bacteria5328Open in IMG/M
3300017789|Ga0136617_10125460All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2205Open in IMG/M
3300017789|Ga0136617_10208387All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1644Open in IMG/M
3300017789|Ga0136617_10225180All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1571Open in IMG/M
3300017789|Ga0136617_10238026All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1521Open in IMG/M
3300017789|Ga0136617_10272610All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1401Open in IMG/M
3300017789|Ga0136617_10281610All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1374Open in IMG/M
3300017789|Ga0136617_10336488All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1232Open in IMG/M
3300017789|Ga0136617_10631120All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium838Open in IMG/M
3300017789|Ga0136617_10793479All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium729Open in IMG/M
3300017789|Ga0136617_11134264All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium590Open in IMG/M
3300019360|Ga0187894_10104537All Organisms → cellular organisms → Bacteria1507Open in IMG/M
3300019458|Ga0187892_10005575All Organisms → cellular organisms → Bacteria19661Open in IMG/M
3300027618|Ga0208736_1009599All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2437Open in IMG/M
3300027618|Ga0208736_1083130All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium776Open in IMG/M
3300027910|Ga0209583_10204836All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium844Open in IMG/M
3300031454|Ga0272427_1065878All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1570Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand89.32%
Polar DesertEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert3.88%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.94%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.97%
RockEnvironmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock0.97%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.97%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.97%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002548Polar desert microbial communities from Antarctic Dry Valleys - UQ255EnvironmentalOpen in IMG/M
3300003322Sugarcane root Sample L2Host-AssociatedOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300011244Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 18 - S13.2.60.3.a - transect 2, repeat 3, age 113 years, surface depth)EnvironmentalOpen in IMG/M
3300012042Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ489 (22.06)EnvironmentalOpen in IMG/M
3300012043Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)EnvironmentalOpen in IMG/M
3300012045Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)EnvironmentalOpen in IMG/M
3300012046Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)EnvironmentalOpen in IMG/M
3300012092Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)EnvironmentalOpen in IMG/M
3300012093Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)EnvironmentalOpen in IMG/M
3300012094Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)EnvironmentalOpen in IMG/M
3300012185Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)EnvironmentalOpen in IMG/M
3300012186Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)EnvironmentalOpen in IMG/M
3300012188Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)EnvironmentalOpen in IMG/M
3300012526Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ857 (21.06)EnvironmentalOpen in IMG/M
3300012529Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)EnvironmentalOpen in IMG/M
3300012531Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)EnvironmentalOpen in IMG/M
3300012679Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)EnvironmentalOpen in IMG/M
3300012680Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)EnvironmentalOpen in IMG/M
3300012681Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)EnvironmentalOpen in IMG/M
3300012682Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ223 (23.06)EnvironmentalOpen in IMG/M
3300012684Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)EnvironmentalOpen in IMG/M
3300013097Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ859 (21.06)EnvironmentalOpen in IMG/M
3300017695Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)EnvironmentalOpen in IMG/M
3300017787Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)EnvironmentalOpen in IMG/M
3300017789Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)EnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300027618Polar desert microbial communities from Antarctic Dry Valleys - UQ255 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300031454Rock endolithic microbial communities from Victoria Land, Antarctica - Siegfried Peak sudEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24974J35850_100390723300002548Polar DesertMAGIRTLATAILQKTNCQNKKAQLENFSDDFDNLIITLKTMNFL*
JGI24974J35850_102343813300002548Polar DesertMAEVRTLTTIILSKTNCQNKKAQLENFSDDFDSLIITLKMLNFL*
rootL2_1025449033300003322Sugarcane Root And Bulk SoilMSGIRTLATIILEKTGSQNKKAQMEKFADDFDKLILTLKDLNFL*
Ga0075023_10003561313300006041WatershedsMAGLRTLATTILEKTNCQNKKAQLEDFADDFDNLIITLKGMNFL*
Ga0137483_10708623300011244Glacier Forefield SoilMAGLRTLATTILQKTNCQNKKEQLEDFADNFDNLILTLKAFNFL*
Ga0136627_103021733300012042Polar Desert SandMAEVRTMATIILSETNCQNKKAQLENFSDNFDSLIVTLKLLNFL*
Ga0136627_106679523300012042Polar Desert SandMAEIRTLATTILSKTNCQNKKAQLENFGDDFDSLIIALKRFKFL*
Ga0136631_1007241823300012043Polar Desert SandMAEVRTLTTIILSKTNCQNKKAQLENFSDDFDSLIITLKILNFL*
Ga0136623_1006664123300012045Polar Desert SandMAEVRTMATIILSETKCQNKKAQLENFSDNFDSLIVTLKMLNFL*
Ga0136623_1009082323300012045Polar Desert SandMAGLRTLATTILRKTKCQNKKEQLEDFADNFDTLIIALKTFNFL*
Ga0136623_1014460623300012045Polar Desert SandMAGIRTLAMSILQKTRCHNKKAQLEDFADDFDSLIITLKAMNFL*
Ga0136634_1001661553300012046Polar Desert SandAFKKKTVNRIMAGVRTLATALLQKTNCQNKKAQLENFSDDFDNLIIILKILNFL*
Ga0136634_1003448723300012046Polar Desert SandMAGIRTLATIILEKTRCQNKKAQLENFADDFDHLIVTLKVMNFL*
Ga0136634_1003629713300012046Polar Desert SandMAGLRTIATTLLQKTKCQNKKEQLENFADDFGNLIITLKS
Ga0136634_1004198023300012046Polar Desert SandMGGLRTLATAILEQTKCQNKKAQLENFSDDFDNLIITLKALNFL*
Ga0136634_1005551443300012046Polar Desert SandTAILEKTGCQNKKAQLDDFADNFDNLILTLQLFNFL*
Ga0136634_1007836613300012046Polar Desert SandMGGLRTLTTAILEKTGCQNKKAQLDDFADNFDNLILTLQLFNFL*
Ga0136634_1007844013300012046Polar Desert SandMAGVRTLAIAILDQTNCQNKKAQLENFSDDFDSLIITLKKFNFL*
Ga0136634_1008962353300012046Polar Desert SandTIILSKTNCQNKKAQLENFSDDFDSLIITLKMLNFL*
Ga0136634_1011813513300012046Polar Desert SandMAGLRTLATTILRKTKCQNKKEQLEDFADNFDNLI
Ga0136634_1014566113300012046Polar Desert SandTTVLSEIKCQNKKAQLENFSDDFDSLIVTLKMLNFL*
Ga0136634_1016622213300012046Polar Desert SandTILEKTECQNKKAQLEDFADDFDNLIITLKLINFL*
Ga0136634_1025227223300012046Polar Desert SandMAGVRTLAIAILSQTNCQNKKAQLENFSDDFDTLIITLKKLDFL*
Ga0136634_1026137723300012046Polar Desert SandILEKTGCQNKKAQLENFADDFDKLIITLKVMNFL*
Ga0136634_1030055223300012046Polar Desert SandTIILQKTNCQNKKAQLENFSDDFDSLIVTLKSLNFL*
Ga0136634_1034006123300012046Polar Desert SandMAGIRSLATIILEKTKCQNKKAQLEEFADDFDTLIITLKEMNFL*
Ga0136634_1034006133300012046Polar Desert SandILQKTNCQNKKAQLENFSDDFDGLIVTLKSLDFL*
Ga0136634_1036123213300012046Polar Desert SandFEIACSKKIKCGQKKTVNRLMAGVRTLAIAILDQTNWQNKKAQSENFSDDFDSLIITLKKFNFL*
Ga0136634_1044227223300012046Polar Desert SandILQKTNCQNKKEQLEDFADNFDNLILTLKTFNFL*
Ga0136634_1048659413300012046Polar Desert SandMAEVRTLATTILSQTNCQNKKAQLENFGDNFGNLIITLKSLNF
Ga0136621_113460023300012092Polar Desert SandMAGIRTLATTILQKTGCRNKKAQLENFADDFDNLIITLKVMNFL*
Ga0136632_1007407323300012093Polar Desert SandMASIRTLATVILHKTNCQNKKAQLENFSDDFDNLIITLKNLNFL*
Ga0136632_1009948113300012093Polar Desert SandMAGLRTLATTILQKTNWQNKKEQLEDFADNFDTLIIT
Ga0136638_1000369343300012094Polar Desert SandMAEVRTLATAILNKTNCQNKKAQLENFSDDFDSLIITLKNLNFL*
Ga0136638_1000953413300012094Polar Desert SandMAGVRTLAIAILDQTNWQNKKAQSENFSDDFDSLTITLKKFNFL*
Ga0136638_1003680633300012094Polar Desert SandTIILEKTKCQNKKAQLENFADDFDNLIITLKVMNFL*
Ga0136638_1004541813300012094Polar Desert SandMAGIRTLATIILEKTKCQNKKAQLENFADDFDNLIITLKVMNFL*
Ga0136638_1005057723300012094Polar Desert SandMAEIRTLATTILSNTNCQNKKAQLENFSDDFDSLIIKLKVLNFL*
Ga0136638_1009211233300012094Polar Desert SandMAEVRTLATTILNKTNCQNKKAQLENFSDDFDGLII
Ga0136638_1011261813300012094Polar Desert SandMASIRTLATVILHKTNCQNKKAQLENFSDDFDNLIIT
Ga0136638_1028349413300012094Polar Desert SandATTILRKTKCQNKKEQLEDFADNFDNLIIALKTFNFL*
Ga0136619_1006336913300012185Polar Desert SandMAGIRTLATTILQKTGCRNKKAQLENFADDFDNLIITLKGLN
Ga0136619_1026227923300012185Polar Desert SandMILEKTKCQNKKAQLEDFADDFDNLIITLKGLNFL*
Ga0136620_1011402913300012186Polar Desert SandTVILHKTNCQNKKAQLENFSDDFDNLIITLKNLNFL*
Ga0136618_1001880113300012188Polar Desert SandTIILQKINCQNKKAQLENFGDDFDSLIVTLKSLNFL*
Ga0136618_1005970823300012188Polar Desert SandMAEVRTLAIAILNQTNCQNKKAQLENFSDDFDSLIITLKKLNFL*
Ga0136618_1010825623300012188Polar Desert SandMAEVRTLTTTILSKTNGQNKKAQLENFSDDFDGLIITLKMLNFL*
Ga0136618_1019242213300012188Polar Desert SandMAGLRTIATTILRKTKCQNKKEQLEDFADNFDNLIIALKTFNF
Ga0136637_100062193300012526Polar Desert SandMAGLRTIATTILRKTKCQNKKEQLEDFADNFDTLILALKTFNFL*
Ga0136630_115782223300012529Polar Desert SandMAGIRTLAMSILQKTRCHNKKAQSEDFADDFDSLIITLKAMNFL*
Ga0136630_117521113300012529Polar Desert SandMAILQKTKCQNKKAQLENFSDDFDNLIITLKVLNFL*
Ga0136630_133849023300012529Polar Desert SandMGEIRTLAIAILQKTNCQNKKAQLENFSDDFDNLIVTLKLLNFL*
Ga0136640_1004187613300012531Polar Desert SandTTILRKTKCQNKKEQLEDFADNFDTLIIALKTFNFL*
Ga0136640_1040889013300012531Polar Desert SandMAEVRTMATIILSETNCQNKKAQLENFSDNFDSLIVALKLLNF
Ga0136616_1008293923300012679Polar Desert SandMAEVRTLATAILNKTNCQNKKAQLENFSDDFDGLIITLKNLNFL*
Ga0136616_1047139313300012679Polar Desert SandMAGLRTIATTILRKTKCQNKKEQLEDFADNFDNLIIALKTFN
Ga0136616_1055299733300012679Polar Desert SandRTLATTILQKTNCQNKKEQLENFADNFDNLIVTLKTFNFL*
Ga0136616_1058314013300012679Polar Desert SandILRKTKCQNKKEQLEDFADNFDNLIIALKTFNFL*
Ga0136612_1015064213300012680Polar Desert SandMAEIRTLATTILSNTNCQNKKAQLENFSDDFDSLIITLKILNFL*
Ga0136613_1006751113300012681Polar Desert SandTTILQKTNCQNKKEQLEDFADNFDNLIITLKTFNFL*
Ga0136613_1008597833300012681Polar Desert SandMAGLRTLACEILQKTKCQNKKAQLENFADNFDDLIITLKILNFL*
Ga0136613_1010029323300012681Polar Desert SandTILQKTNCQNKKEQLEDFADNFDNLIITLKTFNFL*
Ga0136613_1024636513300012681Polar Desert SandQQTMAGLRTLATTILRKTKCKNKKEQLEDFADNFDTLILALKTFNFL*
Ga0136613_1048103013300012681Polar Desert SandMAEVRTMATIILSETKCQNKKAQLENFSDNFDSLIVT
Ga0136613_1079333013300012681Polar Desert SandTILRKTKCQNKKEQLEDFADNFDTLILALKTFNFL*
Ga0136611_1014100533300012682Polar Desert SandMAGIRTLATTILQNTGCHNKRAQLEDFADDFDNLIITLKVMNFL*
Ga0136611_1019492933300012682Polar Desert SandMGGLRTLAAIILQKTNCQNKKEQLEDFADNFDNLIITLK
Ga0136611_1030954313300012682Polar Desert SandKKKLQQTMAGLRTIATTLLHKTRCQNKKAQLEEFTDNFDD*
Ga0136611_1085083213300012682Polar Desert SandMGEIRTMATIILQKINCRNKKAQLENFGDDFDSLIVTLKSLNFL*
Ga0136614_1004603843300012684Polar Desert SandMAGVRTLTTIILSQTNCQNKKAQLENFSDDFGSLIVTLKILNFL*
Ga0136614_1056575513300012684Polar Desert SandILQKTNCQNKKEQLEDFADNFDTLIITLKTFNFL*
Ga0136614_1076760913300012684Polar Desert SandIMAEVRTLAIAILNKTNCQYKKAQLENFSDDFDGLIITLKNLNFL*
Ga0136639_1031711213300013097Polar Desert SandMAGLRTLATTILQKTNCQNKKEQLEDFADNFDNLIITLKT
Ga0180121_1001380423300017695Polar Desert SandMAGIRTLATAILQKTPCQNKKAQLENFSDDFDNLIITLKVLNFL
Ga0180121_1006080623300017695Polar Desert SandMAGIRTLVTTILKKTRCQNKKAQLEDFADDYDSLIITLKLMNFL
Ga0180121_1011344623300017695Polar Desert SandMAGVRTLAIAILNQTNCQNKKAQLENFSDDFDSLIITLKKFNFL
Ga0180121_1028080523300017695Polar Desert SandMGGLRTLTTAILEKTECQNKKAQLDDFADNFDNLILTLKLFNFL
Ga0180121_1032901123300017695Polar Desert SandMGGLRTLTTAILQKTGCQNRKAQIDDFADSFDYLILTLKTFNFL
Ga0180121_1034262923300017695Polar Desert SandMGEIRTLATIILQKTKCQNKKAQLENFGDDFDGLIVTLKSLNFL
Ga0183260_1005433423300017787Polar Desert SandMAEIRTLATTILSNTNCQNKKAQLENFSDDFDSLIITLKILNFL
Ga0183260_1006072633300017787Polar Desert SandMAGIRTVAAAILNQTNCPNKKAQLENFSDDFDELIVTLKLLNFL
Ga0183260_1008865823300017787Polar Desert SandMAGIRTLATIILEKTKCQNKKAQLENFADDFDNLIITLKVMNFL
Ga0183260_1016445433300017787Polar Desert SandMAEVRTLAIAILNQTNCQNKKAQLENFSDDFDSLIITLKKLNFL
Ga0183260_1035960323300017787Polar Desert SandMGEIRTLATIILQKINCLNKKAQLENFGDDFDSLIITLKSLNFL
Ga0183260_1051196533300017787Polar Desert SandVATIILSKTNWQNKKAQLENFSDDFDSLIVTLKILNFL
Ga0183260_1090984413300017787Polar Desert SandTIILSKTNCQNKKAQLENFGDDFDSLIVTLKFLNFL
Ga0136617_1002496143300017789Polar Desert SandMAGLRTLATTILQKTNCQNKKEQLEDFADNFDNLIITLKTFNFL
Ga0136617_1012546023300017789Polar Desert SandMAGVRTLAIAILSQTSCQNKKAQLENFSDDFDTLIITLDII
Ga0136617_1020838733300017789Polar Desert SandMGGLRTLTTAILEKTKCQNKKAQLDNFADNFDNLILTLKLFNFL
Ga0136617_1022518023300017789Polar Desert SandMAGVRTLAIAILDQTNWQNKKAQSENFSDDFDSLIITLKKFNFL
Ga0136617_1023802633300017789Polar Desert SandMAGIRTLATTILEKTECQNKKAQLEDFADDFDNLIITLKLINFL
Ga0136617_1027261023300017789Polar Desert SandMAEVRTLTTTILSKTNGQNKKAQLENFSDDFDGLIITLKMLNFL
Ga0136617_1028161033300017789Polar Desert SandMAAIRRLATAILEKTNCQNKKAQLEDFSDYFDNLIITLKIMNFL
Ga0136617_1033648843300017789Polar Desert SandMAEIRTLATIILRKTNCQNKKAQLENFGDDFDSLIVTLKVLNFL
Ga0136617_1063112023300017789Polar Desert SandTIILRKTNCQNKKAQLENFGDDFDSLIVTLKVLNFL
Ga0136617_1079347913300017789Polar Desert SandMAGLRTVATTILQKTNCQNKKEQLEDFADNFDNLIITLKT
Ga0136617_1113426413300017789Polar Desert SandMAGLRTIATTILRKTKCQNKKEQLEDFADNFDNLI
Ga0187894_1010453713300019360Microbial Mat On RocksIRTLATTILNKTDCQNKKAQLEKFSDNFDDLIMKLKLLNFLRVSERLCK
Ga0187892_10005575183300019458Bio-OozeTTILNKTDCQNKKAQLEKFSDNFDDLIMKLKLLNFL
Ga0208736_100959923300027618Polar DesertMAGIRTLATAILQKTNCQNKKAQLENFSDDFDNLIITLKTMNFL
Ga0208736_108313013300027618Polar DesertMAGIRTLATTILEKTRCQNKKAQLENFADDFDNLIV
Ga0209583_1020483623300027910WatershedsMAGLRTLATTILEKTNCQNKKAQLEDFADDFDNLIITLKGMNFL
Ga0272427_106587813300031454RockMAEVRTIATIVISTTEGQNKKAQLENFSDNFDSLIVTLK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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