Metagenome Family F098276

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098276
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	71 residues
Representative Sequence	VTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Number of Associated Samples	60
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.38 %
% of genes near scaffold ends (potentially truncated)	45.19 %
% of genes from short scaffolds (< 2000 bps)	82.69 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.846 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (57.692 % of family members)
Environment Ontology (ENVO)	Unclassified (34.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.808 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 83.10% β-sheet: 0.00% Coil/Unstructured: 16.90%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF11774	Lsr2	15.38
PF12697	Abhydrolase_6	3.85
PF11239	DUF3040	3.85
PF01061	ABC2_membrane	0.96
PF13936	HTH_38	0.96
PF05598	DUF772	0.96
PF05235	CHAD	0.96
PF13834	DUF4193	0.96
PF09137	Glucodextran_N	0.96
PF04542	Sigma70_r2	0.96
PF03372	Exo_endo_phos	0.96
PF08808	RES	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.96
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.96
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.96
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.96
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.96
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.96
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.96
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.85 %
Unclassified	root	N/A	46.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.85 %
Unclassified	root	N/A	46.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.85 %
Unclassified	root	N/A	46.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.58 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.85 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	2.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.92 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.96 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	2.88 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.92 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	0.96 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.96 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.96 %
Gordoniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae	0.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	2.88 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.92 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.96 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	0.96 %
Intrasporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium	0.96 %
Gordonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	0.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Nakamurella multipartita	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita	1.92 %
Mycobacterium tilburgii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tilburgii	1.92 %
Intrasporangium chromatireducens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium chromatireducens	0.96 %
Actinopolymorpha pittospori	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha pittospori	0.96 %
Nakamurella lactea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	0.96 %
unclassified Gordonia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → unclassified Gordonia	0.96 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	0.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	1.92 %
Mycobacterium tilburgii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tilburgii	1.92 %
Gordonia sp. 'Campus'	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → unclassified Gordonia → Gordonia sp. 'Campus'	0.96 %
Intrasporangium chromatireducens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium chromatireducens	0.96 %
Actinopolymorpha pittospori	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha pittospori	0.96 %
Nakamurella lactea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	0.96 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	0.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001404\|JGI20181J14860_1000642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5873	Open in IMG/M
3300001424\|JGI20198J14950_1001156	Not Available	2767	Open in IMG/M
3300001427\|JGI20200J14955_1002674	All Organisms → cellular organisms → Bacteria	2789	Open in IMG/M
3300001427\|JGI20200J14955_1003509	All Organisms → cellular organisms → Bacteria	2304	Open in IMG/M
3300001427\|JGI20200J14955_1016932	Not Available	653	Open in IMG/M
3300002347\|JGIcombinedJ26865_1003640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha pittospori	2677	Open in IMG/M
3300003369\|JGI24140J50213_10111765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	896	Open in IMG/M
3300003369\|JGI24140J50213_10170687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	687	Open in IMG/M
3300003369\|JGI24140J50213_10274210	Not Available	515	Open in IMG/M
3300006642\|Ga0075521_10174250	Not Available	1015	Open in IMG/M
3300006642\|Ga0075521_10251289	Not Available	845	Open in IMG/M
3300006642\|Ga0075521_10497042	Not Available	597	Open in IMG/M
3300006642\|Ga0075521_10498774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → unclassified Gordonia → Gordonia sp. 'Campus'	596	Open in IMG/M
3300006642\|Ga0075521_10678238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium chromatireducens	508	Open in IMG/M
3300006795\|Ga0075520_1104178	Not Available	1283	Open in IMG/M
3300012961\|Ga0164302_11746104	Not Available	523	Open in IMG/M
3300014498\|Ga0182019_10137631	Not Available	1536	Open in IMG/M
3300014498\|Ga0182019_11371405	Not Available	524	Open in IMG/M
3300015371\|Ga0132258_10519791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2979	Open in IMG/M
3300025427\|Ga0208077_1009175	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300025443\|Ga0208081_1004853	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300025443\|Ga0208081_1008363	All Organisms → cellular organisms → Bacteria	2006	Open in IMG/M
3300025443\|Ga0208081_1027179	Not Available	1015	Open in IMG/M
3300025461\|Ga0208851_1003598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4096	Open in IMG/M
3300025461\|Ga0208851_1009567	Not Available	2081	Open in IMG/M
3300025461\|Ga0208851_1011190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tilburgii	1880	Open in IMG/M
3300025464\|Ga0208076_1039827	Not Available	820	Open in IMG/M
3300025474\|Ga0208479_1008903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2147	Open in IMG/M
3300025474\|Ga0208479_1017099	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300025474\|Ga0208479_1105445	Not Available	510	Open in IMG/M
3300025475\|Ga0208478_1004057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3635	Open in IMG/M
3300025479\|Ga0208588_1059065	Not Available	751	Open in IMG/M
3300025479\|Ga0208588_1073926	Not Available	651	Open in IMG/M
3300025495\|Ga0207932_1002924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	5756	Open in IMG/M
3300025527\|Ga0208714_1103972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	558	Open in IMG/M
3300025650\|Ga0209385_1004575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5918	Open in IMG/M
3300025857\|Ga0209014_10047505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1880	Open in IMG/M
3300025878\|Ga0209584_10156516	Not Available	860	Open in IMG/M
3300025878\|Ga0209584_10175157	Not Available	814	Open in IMG/M
3300025878\|Ga0209584_10395242	Not Available	534	Open in IMG/M
3300026294\|Ga0209839_10174739	Not Available	699	Open in IMG/M
3300028651\|Ga0302171_10027205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tilburgii	1448	Open in IMG/M
3300028652\|Ga0302166_10020896	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300028665\|Ga0302160_10154813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300028739\|Ga0302205_10166213	Not Available	565	Open in IMG/M
3300028740\|Ga0302294_10121998	Not Available	640	Open in IMG/M
3300028743\|Ga0302262_10096451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1015	Open in IMG/M
3300028770\|Ga0302258_1048073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1002	Open in IMG/M
3300028803\|Ga0307281_10261478	Not Available	638	Open in IMG/M
3300028855\|Ga0302257_1063540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	816	Open in IMG/M
3300028855\|Ga0302257_1091797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300028856\|Ga0302295_1012070	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300028856\|Ga0302295_1023556	Not Available	1192	Open in IMG/M
3300028865\|Ga0302291_10287076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300028868\|Ga0302163_10067002	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300028870\|Ga0302254_10013185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2782	Open in IMG/M
3300028870\|Ga0302254_10207991	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300029923\|Ga0311347_10270203	Not Available	1040	Open in IMG/M
3300029980\|Ga0302298_10017396	Not Available	1959	Open in IMG/M
3300029981\|Ga0302293_10207051	Not Available	609	Open in IMG/M
3300029984\|Ga0311332_10048205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2977	Open in IMG/M
3300029984\|Ga0311332_10752534	Not Available	775	Open in IMG/M
3300029984\|Ga0311332_10947731	Not Available	689	Open in IMG/M
3300029987\|Ga0311334_10598142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	895	Open in IMG/M
3300029989\|Ga0311365_10382654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1217	Open in IMG/M
3300029989\|Ga0311365_10481917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	1075	Open in IMG/M
3300029990\|Ga0311336_10078663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2587	Open in IMG/M
3300029990\|Ga0311336_10470465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1062	Open in IMG/M
3300029990\|Ga0311336_10536852	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300029990\|Ga0311336_11087074	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300029990\|Ga0311336_11653367	Not Available	565	Open in IMG/M
3300029990\|Ga0311336_11920173	Not Available	524	Open in IMG/M
3300030000\|Ga0311337_11467127	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300030002\|Ga0311350_10169811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	1935	Open in IMG/M
3300030002\|Ga0311350_10377294	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300030002\|Ga0311350_10747890	Not Available	877	Open in IMG/M
3300030003\|Ga0302172_10163213	Not Available	695	Open in IMG/M
3300030014\|Ga0302175_10028288	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300030014\|Ga0302175_10048259	Not Available	920	Open in IMG/M
3300030014\|Ga0302175_10076750	Not Available	745	Open in IMG/M
3300030014\|Ga0302175_10135935	Not Available	576	Open in IMG/M
3300030019\|Ga0311348_10534146	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300030019\|Ga0311348_11086466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300030048\|Ga0302273_1072209	Not Available	1024	Open in IMG/M
3300030048\|Ga0302273_1115675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300030050\|Ga0302255_1011567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1595	Open in IMG/M
3300030050\|Ga0302255_1069856	Not Available	701	Open in IMG/M
3300030050\|Ga0302255_1125035	Not Available	527	Open in IMG/M
3300030114\|Ga0311333_10213691	Not Available	1504	Open in IMG/M
3300030294\|Ga0311349_11629465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300030491\|Ga0302211_10026473	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300030838\|Ga0311335_10175523	Not Available	1422	Open in IMG/M
3300030838\|Ga0311335_10681620	Not Available	722	Open in IMG/M
3300031232\|Ga0302323_100427559	Not Available	1405	Open in IMG/M
3300031232\|Ga0302323_100935814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	959	Open in IMG/M
3300031521\|Ga0311364_10560397	Not Available	1154	Open in IMG/M
3300031521\|Ga0311364_11836503	Not Available	596	Open in IMG/M
3300031722\|Ga0311351_10627847	Not Available	818	Open in IMG/M
3300031722\|Ga0311351_10675507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	786	Open in IMG/M
3300031726\|Ga0302321_100165755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2283	Open in IMG/M
3300031726\|Ga0302321_101167275	Not Available	881	Open in IMG/M
3300031902\|Ga0302322_101785645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300031918\|Ga0311367_10243908	Not Available	1872	Open in IMG/M
3300031918\|Ga0311367_11094878	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.04%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	59.62%
Soil	Environmental → Terrestrial → Soil	39.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	59.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	59.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	34.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	57.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	34.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.92%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001404	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012	Environmental	Open in IMG/M
3300001424	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-092012	Environmental	Open in IMG/M
3300001427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025443	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025479	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300028651	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028665	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3	Environmental	Open in IMG/M
3300028739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_3	Environmental	Open in IMG/M
3300028740	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_3	Environmental	Open in IMG/M
3300028743	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4	Environmental	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028855	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_4	Environmental	Open in IMG/M
3300028856	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_4	Environmental	Open in IMG/M
3300028865	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4	Environmental	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029980	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_3	Environmental	Open in IMG/M
3300029981	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_2	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030048	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_3	Environmental	Open in IMG/M
3300030050	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_4	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030491	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_3	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20181J14860_10006424	3300001404	Arctic Peat Soil	MAEGDSIQDQIDDLRARLIELAEIAQHLTLIGEALGLTRGMLVDLIEASDADPDDYIDDLDRLDHITQLILANATR*
JGI20198J14950_10011563	3300001424	Arctic Peat Soil	VTGGESTEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLIEASDADPDDYVDDLDRLDQIANQFP*
JGI20200J14955_10026741	3300001427	Arctic Peat Soil	DGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP*
JGI20200J14955_10035095	3300001427	Arctic Peat Soil	MVTRPIPLCDLQNSLEGVLVTGGESTEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLIEASDADPDDYVDDLDRLDQIANQFP*
JGI20200J14955_10169321	3300001427	Arctic Peat Soil	VTDGESTEDRLNELRARIIEINELTQINLLTGEALGLIRGMLIDLVEASDADPDDYIDDLERLDQIANQFP*
JGIcombinedJ26865_10036401	3300002347	Arctic Peat Soil	MXEGDSIQDQIXDLRARLIELAEIAQHLTLIGEALGLTRGMLVDLIEASDADPDDYIDDLDRLDHITQLILANATR*
JGI24140J50213_101117651	3300003369	Arctic Peat Soil	MAEGDSIQDQIDDLRARLIELTEIAQHLTLIGEALGLTRGMLVDLIEASDADPDDYIDDLDRLDHITQLILANAAR*
JGI24140J50213_101706872	3300003369	Arctic Peat Soil	VTDGESTEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP*
JGI24140J50213_102742101	3300003369	Arctic Peat Soil	EDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP*
Ga0075521_101742502	3300006642	Arctic Peat Soil	VTDGESIEDQLNELRARIVEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP*
Ga0075521_102512892	3300006642	Arctic Peat Soil	LEGVLVTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMFIDLVEASDADPDDYIDDLDRLDQIANQFP*
Ga0075521_104970421	3300006642	Arctic Peat Soil	MVEGDSIQDQIDDLRARLIELAEIAQHLTLIGEALGLTRGMLVDLIEASDADPDDYIDDLDRLDHITQLILANA
Ga0075521_104987742	3300006642	Arctic Peat Soil	VTDGESTEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLERLDQIANQFP*
Ga0075521_106782381	3300006642	Arctic Peat Soil	VTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP*
Ga0075520_11041781	3300006795	Arctic Peat Soil	VTDGESIEGQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP*
Ga0164302_117461042	3300012961	Soil	VTNSESIEDQHNELRARIVEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP*
Ga0182019_101376312	3300014498	Fen	VTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMFIDLVEASDADPDDYIDDLDRLDQIANQFP*
Ga0182019_113714051	3300014498	Fen	GVLVTDGESTEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP*
Ga0132258_105197911	3300015371	Arabidopsis Rhizosphere	VTDGASIEDQLNELRARIVEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP*
Ga0208077_10091751	3300025427	Arctic Peat Soil	VTDGESIEGQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0208081_10048531	3300025443	Arctic Peat Soil	TDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0208081_10083634	3300025443	Arctic Peat Soil	MVTRPIPLCDLQNSLEGVLVTGGESTEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLIEASDADPDDYVDDLDRLDQIANQFP
Ga0208081_10271791	3300025443	Arctic Peat Soil	LNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADRDDYIDDLDRLDQIANQF
Ga0208851_10035981	3300025461	Arctic Peat Soil	VEDNAIQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLFSLNP
Ga0208851_10095672	3300025461	Arctic Peat Soil	VTDGESTEDRLNELRARIIEINELTQINLLTGEALGLIRGMLIDLVEASDADPDDYIDDLERLDQIANQFP
Ga0208851_10111903	3300025461	Arctic Peat Soil	MAEGDSIQDQIDDLRARLIELAEIAQHLTLIGEALGLTRGMLVDLIEASDADPDDYIDDLDRLDHITQLILANATR
Ga0208076_10398272	3300025464	Arctic Peat Soil	VTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLIEASDADPDDYIDDLDRLDQIANQFP
Ga0208479_10089034	3300025474	Arctic Peat Soil	VTDGESTEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLIESSDADPDDYIDDLDRLDQIANQFP
Ga0208479_10170991	3300025474	Arctic Peat Soil	SLEGVLVTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0208479_11054451	3300025474	Arctic Peat Soil	MEGVLVTDGESIEDQLNKLRARIVEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0208478_10040573	3300025475	Arctic Peat Soil	VEDNESLQDQLDELRTRMIELNELAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLP
Ga0208588_10590653	3300025479	Arctic Peat Soil	MAEGDFVQDQIDHLRDRLIELNEIAQHVTLIGEALGLTRGMLVDLIEASDADPDDYIDDLDRLDH
Ga0208588_10739261	3300025479	Arctic Peat Soil	TDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADRDDYIDDLDRLDQIANQFP
Ga0207932_10029248	3300025495	Arctic Peat Soil	GESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADRDDYIDDLDRLDQIANQFP
Ga0208714_11039721	3300025527	Arctic Peat Soil	VTDGESTEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLIEASDADPDDYIDDLDRLDQIANQFP
Ga0209385_10045751	3300025650	Arctic Peat Soil	MAEGDSIQDQIDDLRARLIELTEIAQHLTLIGEALGLTRGMLVDLIEASDADPDDYIDDLDRLDHITQLILANAAR
Ga0209014_100475053	3300025857	Arctic Peat Soil	VTDGESTEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0209584_101565162	3300025878	Arctic Peat Soil	VTDGESIEDQLNELRARIVEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0209584_101751571	3300025878	Arctic Peat Soil	VTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQ
Ga0209584_103952421	3300025878	Arctic Peat Soil	VTDGESTEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLERLDQIANQFP
Ga0209839_101747392	3300026294	Soil	VTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADADDYIDDLDRLDQIANQFP
Ga0302171_100272052	3300028651	Fen	MAEGDSIQDQIDDLRARLIELAVIAQHLTLIGEALGLTRGMLVDLIEASDADPDDYIDDLDRLDHITQLILANATR
Ga0302166_100208961	3300028652	Fen	LEGVLVTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0302160_101548132	3300028665	Fen	ELRARIVEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0302205_101662131	3300028739	Fen	QNSLEGVLVTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMFIDLVEASDADPDDYIDDLDRLDQIANQVP
Ga0302294_101219981	3300028740	Fen	VTDGESIEGQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYID
Ga0302262_100964513	3300028743	Fen	VEDNESLQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLP
Ga0302258_10480733	3300028770	Fen	VEDNESIQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDKVTQLARSPNAPGP
Ga0307281_102614781	3300028803	Soil	VTDGESIEGQVNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0302257_10635402	3300028855	Fen	MNPSQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLL
Ga0302257_10917971	3300028855	Fen	VTDGESIEDQLNELHARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0302295_10120703	3300028856	Fen	DQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVDASDADPNDYIDDLDRLDQIANQFP
Ga0302295_10235562	3300028856	Fen	MAEGDSIQDQIDDLRARLIELAEIAQHLTLIGEALGLTRGMLVDLIEASDADPDDYIDDLDRLDHITQLIL
Ga0302291_102870761	3300028865	Fen	MNPSQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGKLIDLIEASDADPDDYIDDLDRLDQITHLLL
Ga0302163_100670022	3300028868	Fen	TSLEGVLVTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0302254_100131853	3300028870	Fen	VEDNESIQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGKLIDLIEASDADPDDYIDDLDRLDQITHLLL
Ga0302254_102079911	3300028870	Fen	LVTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0311347_102702031	3300029923	Fen	MENSPEGYPWKTMNPSQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLL
Ga0302298_100173964	3300029980	Fen	THRKVTRVEDNESIQDQLDELRTRLIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLL
Ga0302293_102070511	3300029981	Fen	VTDGESIEDQLNELHARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDNIDDLDRL
Ga0311332_100482054	3300029984	Fen	VEDNESIQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGKLIDLVEASDADPDDYVDDLDRLDQITHLLL
Ga0311332_107525341	3300029984	Fen	EDQLNELRARIIEINELTQYNLLTGEALGLIRGMFIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0311332_109477311	3300029984	Fen	QDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLL
Ga0311334_105981421	3300029987	Fen	VTDGESIEGQLNELRARIIEINELTQCNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0311365_103826542	3300029989	Fen	MNPSQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDKVTQLARSPNAPGP
Ga0311365_104819171	3300029989	Fen	MAEGDFVQDQIDHLRDRLIELNEIAQHVTLIGEALGLTRGMLVDLIEASDADPDDYIDDLDRLDHITQLLDLGRVRG
Ga0311336_100786634	3300029990	Fen	VEDNESIQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLL
Ga0311336_104704652	3300029990	Fen	ESIEDQLNELRARIVEINELTQYNLLTGEALSLIRGMLIDLVEASEADPDDYIDDLARLDQIADQFP
Ga0311336_105368521	3300029990	Fen	QLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0311336_110870742	3300029990	Fen	WKTMNPSQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDKVTQLARSPNAPGP
Ga0311336_116533672	3300029990	Fen	MAEGDFVQDQIDHLRDRLIELNEIAQHVTLIGEALGLTRGMLVDLIEASDADPDDCIDELDR
Ga0311336_119201731	3300029990	Fen	MEGFLVTNGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0311337_114671272	3300030000	Fen	MNPSQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQLTQLARSPNAPGP
Ga0311350_101698113	3300030002	Fen	VEDNESIQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQVTQLARSPNAPGP
Ga0311350_103772943	3300030002	Fen	GESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0311350_107478902	3300030002	Fen	RFDYPVQTSLKGVRMTDGEPIEDQLNELRARIVEINELTQYNLLTGEALGLIRGMLIDLVEDSDADPGDYIDDLERLDQIANQFP
Ga0302172_101632131	3300030003	Fen	ARRNGELIGRFPVEDNESIQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLL
Ga0302175_100282883	3300030014	Fen	DGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0302175_100482593	3300030014	Fen	MTDGESIEGQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDD
Ga0302175_100767502	3300030014	Fen	SANPVQNSLEGVLVTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMFIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0302175_101359351	3300030014	Fen	MAEGDSIQDQIDDLRARLIELAEIAQHLTLIGEALGLTRGMLVDLIEASDADPDDYIDDLDRLDHITQLILANAAR
Ga0311348_105341461	3300030019	Fen	VTDGESIEDQLNELRGRIIEINELTQYNLLTGEALGLISGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0311348_110864662	3300030019	Fen	MTDGEPIEDQLNELRARIVEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQI
Ga0302273_10722091	3300030048	Bog	VTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMFIDLVEASDADPDDYIDDLDRLDQIANQVP
Ga0302273_11156751	3300030048	Bog	VEDNESLQDQLDELRTRMIELNELAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLL
Ga0302255_10115674	3300030050	Fen	VTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMFIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0302255_10698561	3300030050	Fen	MAEGDSIQDQLDDLRARLIELAEIAQHLTLIGEALGLTRGMLVDLIEASDADPDDYIDDLDRLDHITQLILANATR
Ga0302255_11250351	3300030050	Fen	STQDQLDALRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLL
Ga0311333_102136914	3300030114	Fen	SLEGVLVTDGESTEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0311349_116294652	3300030294	Fen	MNPSQDQLDELRTRMIELNEFAQHIPLVGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQLTQL
Ga0302211_100264731	3300030491	Fen	QNSLEGVLVTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0311335_101755231	3300030838	Fen	MAEGDSVQDQIDDPRDRLIELNEIAQHVTLIGEALGLTRGMLVDLIEASDADPDDCIDDLDRLDHITQLLDLGRVRG
Ga0311335_106816201	3300030838	Fen	VTAGESIEDQLNELRARIIEIHELTHYNLLTGEALGLIRGMLIDLVEASEADPDDYIDDL
Ga0302323_1004275593	3300031232	Fen	ESLQDQLDELRTRMIELNELAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLP
Ga0302323_1009358141	3300031232	Fen	VEDNESIQDQLDELRTRMIELNEFAQHIPLIGEAFGLINGMLIDVIEASDADPDDYIDDLDRLDQITHLLL
Ga0311364_105603972	3300031521	Fen	VTDGESIEDQLNELRARIIEINELTQYNLLTGEALGLIRGMFIDLVAASDADPDDYIDDLDRLDQIANQFP
Ga0311364_118365031	3300031521	Fen	QTSLEGVLVTAGESIEDQLNELRARIIEIHELTHYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP
Ga0311351_106278472	3300031722	Fen	VEDNESLQDQLDELRARMIELNEFAQHIPLIGEAVGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLL
Ga0311351_106755072	3300031722	Fen	MAEGDSIQDQIDDLRARLIELAEIAQHLTLIGEALGLTRGMLVDLIEASDADPDDYIDDVDRLDHITQLVLANATR
Ga0302321_1001657552	3300031726	Fen	VEDNESLQDQLDELRARMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQITHLLL
Ga0302321_1011672752	3300031726	Fen	MEGFLVTDGESIEDQLNELRARIIEINELTQYNLLAGEALGLIRGMLIELVEASDADPDDYIDDLDRLDQIANQFP
Ga0302322_1017856452	3300031902	Fen	MNPSQDQLDELRTRMIELNEFAQHIPLIGEAFGLIKGMLIDVIEASDADPDDYIDDLDRLDQVTQLARSPNAPGP
Ga0311367_102439084	3300031918	Fen	VTDGESIEDQLNELHARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDR
Ga0311367_110948782	3300031918	Fen	DQLNELRARIIEINELTQYNLLTGEALGLIRGMLIDLVEASDADPDDYIDDLDRLDQIANQFP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098276

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences