NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F096016

Metagenome Family F096016

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096016
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 69 residues
Representative Sequence MKWITALALGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGSALAFRLVFNWHSR
Number of Associated Samples 88
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 38.10 %
% of genes near scaffold ends (potentially truncated) 46.67 %
% of genes from short scaffolds (< 2000 bps) 88.57 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.095 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere
(10.476 % of family members)
Environment Ontology (ENVO) Unclassified
(57.143 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(70.476 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 38.78%    β-sheet: 8.16%    Coil/Unstructured: 53.06%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF001982-oxoacid_dh 39.05
PF030614HBT 34.29
PF02817E3_binding 7.62
PF07992Pyr_redox_2 6.67
PF00582Usp 1.90
PF12831FAD_oxidored 0.95
PF01063Aminotran_4 0.95
PF04480DUF559 0.95
PF01545Cation_efflux 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0508Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) componentEnergy production and conversion [C] 46.67
COG0115Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyaseAmino acid transport and metabolism [E] 1.90
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 0.95
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 0.95
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 0.95

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.10 %
UnclassifiedrootN/A1.90 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001904|JGI24736J21556_1005016All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00072241Open in IMG/M
3300001989|JGI24739J22299_10119611All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales787Open in IMG/M
3300001990|JGI24737J22298_10257077Not Available516Open in IMG/M
3300003324|soilH2_10195814All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1115Open in IMG/M
3300004114|Ga0062593_100309352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1353Open in IMG/M
3300004463|Ga0063356_101789221All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae922Open in IMG/M
3300004479|Ga0062595_102610744All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas507Open in IMG/M
3300005093|Ga0062594_102675323All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas552Open in IMG/M
3300005289|Ga0065704_10871921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057503Open in IMG/M
3300005327|Ga0070658_10110364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2278Open in IMG/M
3300005328|Ga0070676_10006805All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00576127Open in IMG/M
3300005328|Ga0070676_10656963All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas762Open in IMG/M
3300005329|Ga0070683_101971313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales561Open in IMG/M
3300005331|Ga0070670_102042038All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales528Open in IMG/M
3300005333|Ga0070677_10795393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae540Open in IMG/M
3300005335|Ga0070666_11011276All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas617Open in IMG/M
3300005337|Ga0070682_101828669All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas530Open in IMG/M
3300005347|Ga0070668_100712942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas885Open in IMG/M
3300005355|Ga0070671_101612188All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas575Open in IMG/M
3300005355|Ga0070671_101632981All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas572Open in IMG/M
3300005367|Ga0070667_102052033All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae539Open in IMG/M
3300005440|Ga0070705_101647859All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas541Open in IMG/M
3300005444|Ga0070694_100011158All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00575565Open in IMG/M
3300005455|Ga0070663_101317186All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae638Open in IMG/M
3300005457|Ga0070662_100965517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas729Open in IMG/M
3300005457|Ga0070662_101196016All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas653Open in IMG/M
3300005458|Ga0070681_10281417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1574Open in IMG/M
3300005459|Ga0068867_101602015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas608Open in IMG/M
3300005536|Ga0070697_101488903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas605Open in IMG/M
3300005539|Ga0068853_100268318All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1571Open in IMG/M
3300005564|Ga0070664_100913308All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057823Open in IMG/M
3300005618|Ga0068864_101372595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas708Open in IMG/M
3300005719|Ga0068861_100970038All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057809Open in IMG/M
3300005719|Ga0068861_102053516All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057571Open in IMG/M
3300005841|Ga0068863_100040222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas4446Open in IMG/M
3300006061|Ga0081201_105930All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1322Open in IMG/M
3300006061|Ga0081201_108830All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057983Open in IMG/M
3300006169|Ga0082029_1482475All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas602Open in IMG/M
3300006845|Ga0075421_101339362All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria791Open in IMG/M
3300006854|Ga0075425_100829658All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1059Open in IMG/M
3300006904|Ga0075424_102092586All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas597Open in IMG/M
3300009553|Ga0105249_12952979All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas546Open in IMG/M
3300010044|Ga0126310_10929015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas680Open in IMG/M
3300010400|Ga0134122_12641050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas553Open in IMG/M
3300012070|Ga0153963_1058932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.617Open in IMG/M
3300013102|Ga0157371_11554850All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae517Open in IMG/M
3300013104|Ga0157370_10428896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae1216Open in IMG/M
3300013306|Ga0163162_13253007All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas521Open in IMG/M
3300014745|Ga0157377_10334744All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.1010Open in IMG/M
3300015371|Ga0132258_10068316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas8229Open in IMG/M
3300015371|Ga0132258_13791219All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00071030Open in IMG/M
3300015372|Ga0132256_101280311All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas846Open in IMG/M
3300015373|Ga0132257_101860482All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas774Open in IMG/M
3300015374|Ga0132255_102110518All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas859Open in IMG/M
3300017792|Ga0163161_11844729All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas538Open in IMG/M
3300018920|Ga0190273_11028753All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas682Open in IMG/M
3300024430|Ga0196962_10310479All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057519Open in IMG/M
3300025315|Ga0207697_10046667All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1785Open in IMG/M
3300025315|Ga0207697_10548476All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057508Open in IMG/M
3300025893|Ga0207682_10072318All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571463Open in IMG/M
3300025893|Ga0207682_10463927All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057600Open in IMG/M
3300025901|Ga0207688_10018245All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00073820Open in IMG/M
3300025904|Ga0207647_10001822All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas16353Open in IMG/M
3300025904|Ga0207647_10335507Not Available857Open in IMG/M
3300025909|Ga0207705_10189785All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571553Open in IMG/M
3300025912|Ga0207707_10265679All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1488Open in IMG/M
3300025919|Ga0207657_10919200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas674Open in IMG/M
3300025923|Ga0207681_10834850All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas770Open in IMG/M
3300025925|Ga0207650_10415222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00071116Open in IMG/M
3300025926|Ga0207659_10082319All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales2383Open in IMG/M
3300025926|Ga0207659_10533677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0007996Open in IMG/M
3300025926|Ga0207659_11742934All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales530Open in IMG/M
3300025930|Ga0207701_11378003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas575Open in IMG/M
3300025931|Ga0207644_11215516All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales633Open in IMG/M
3300025932|Ga0207690_10407037All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571086Open in IMG/M
3300025933|Ga0207706_11083406All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas670Open in IMG/M
3300025938|Ga0207704_10411310All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571070Open in IMG/M
3300025949|Ga0207667_10359593All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571484Open in IMG/M
3300025960|Ga0207651_10323157All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae1290Open in IMG/M
3300025981|Ga0207640_11894613All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas539Open in IMG/M
3300026041|Ga0207639_10578424All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1034Open in IMG/M
3300026118|Ga0207675_100421452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571318Open in IMG/M
3300026118|Ga0207675_101032792All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057841Open in IMG/M
3300026142|Ga0207698_10148563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00572030Open in IMG/M
3300028381|Ga0268264_10458362All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571236Open in IMG/M
3300028778|Ga0307288_10196834All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057775Open in IMG/M
3300031538|Ga0310888_10171013All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571174Open in IMG/M
3300031538|Ga0310888_10713551All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales616Open in IMG/M
3300031538|Ga0310888_10979300All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas531Open in IMG/M
3300031548|Ga0307408_100448152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1119Open in IMG/M
3300031548|Ga0307408_101222340All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas702Open in IMG/M
3300031548|Ga0307408_101354581All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas668Open in IMG/M
3300031731|Ga0307405_10489426All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae983Open in IMG/M
3300031740|Ga0307468_100666600All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057863Open in IMG/M
3300031903|Ga0307407_10949038All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales662Open in IMG/M
3300031911|Ga0307412_10320160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae1233Open in IMG/M
3300031995|Ga0307409_100521839All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1160Open in IMG/M
3300031995|Ga0307409_100968310All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057867Open in IMG/M
3300031996|Ga0308176_10264622All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1657Open in IMG/M
3300032000|Ga0310903_10717793All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas541Open in IMG/M
3300032002|Ga0307416_100154863All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2108Open in IMG/M
3300032005|Ga0307411_10614561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales936Open in IMG/M
3300032012|Ga0310902_10901985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057608Open in IMG/M
3300032126|Ga0307415_100018321All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00074225Open in IMG/M
3300032211|Ga0310896_10567916All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057629Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere10.48%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere9.52%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere9.52%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere8.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere7.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere6.67%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.86%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.86%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.86%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.90%
Petroleum SedimentEngineered → Industrial Production → Engineered Product → Unclassified → Unclassified → Petroleum Sediment1.90%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.95%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.95%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.95%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.95%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.95%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.95%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2Host-AssociatedOpen in IMG/M
3300001989Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5Host-AssociatedOpen in IMG/M
3300001990Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3Host-AssociatedOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006061Microbial communities from petroleum pipeline sediment, Khambat, Gujarat, IndiaEngineeredOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012070Attine ant fungus gardens microbial communities from Florida, USA - TSFL047 MetaGHost-AssociatedOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300024430Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24736J21556_100501643300001904Corn RhizosphereLALGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGSALAFRLVFNWHSR*
JGI24739J22299_1011961113300001989Corn RhizosphereSSGWSRTLWACSLEMKWISALLLGALLGFVLPTGLDMRSGVWMHSWAAWGTVHPHVGSPGLLFSWPLFAGSAIALRLVFNWHTR*
JGI24737J22298_1025707723300001990Corn RhizosphereMKWITALAFGLILGILLPTMMNGGEGLWTDSWAGWGTIHPHAGSPGLLLSIPVFLGSACA
soilH2_1019581433300003324Sugarcane Root And Bulk SoilSSASSKTRLECWPEMKWVSALLLGAILGFVLPTGLDMRSGVWMNSWAAWGTVHPHVNSPGLLFSWPLFAGSAIALRMVFNWHTR*
Ga0062593_10030935233300004114SoilMKWISALLLGALLGFVLPTGLDMRSGVWMHSWAAWGTVHPHVGSPGLLFSWPLFAGSAIALRLVFNWHTR*
Ga0063356_10178922113300004463Arabidopsis Thaliana RhizosphereMKWVSALLLGAILGFVLPTGLDMRSGVWMNSWAAWGTIRPHVGSPGLLFSWPLFAGSALALRMVFNWHTR*
Ga0062595_10261074413300004479SoilMKWITALVLGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGSALAFRLVFNWHSR*
Ga0062594_10267532313300005093SoilMKWVSALMLGAIVGIVLPTAIDARSGVWTNSWTGWGTVHPHAGSPGLLLSIPLFLGSALFLRLVFNWHSR*
Ga0065704_1087192123300005289Switchgrass RhizosphereMKWITALVLGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPDAGSPGLLFSIPLFLGSALAFRLVFNWHSR*
Ga0070658_1011036423300005327Corn RhizosphereMKWITALAFGLILGILLPTMMNGGEGLWTDSWAGWGTIHPHAGSPGLLLSIPVFLGSACALRALFSWHS*
Ga0070676_1000680533300005328Miscanthus RhizosphereMKWMTAILLGLIIGTVLPTGMDLRSGVWMNNWTAWGTIHPHAGSPALLLSLPVFIGSAIFLRLVFNWHTR*
Ga0070676_1065696323300005328Miscanthus RhizosphereMKWMTAILLGLIIGTILPTGMDLRSGVWMNNWTAWGTIHPHAGSPGLLLSLPVFIGSAIFLRLVFNWHTR*
Ga0070683_10197131323300005329Corn RhizosphereCRRSSGWSKTLWACSLEMKWISALLLGALLGFVLPTGLDMRSGVWMHSWAAWGTVHPHVGSPGLLFSWPLFAGSAIALRLVFNWHTR*
Ga0070670_10204203813300005331Switchgrass RhizosphereKWMSALLLGAILGFVMPTGLDMRSGVWMNSWAAWGTVHPHANSPGLLFSWPLFIGSAIAFRMVFNWHTR*
Ga0070677_1079539323300005333Miscanthus RhizosphereALLLGAILGVVLPTALDARSGLWTNSWTGWGTIHPHAGSPGLLLSIPVWLGSALFLRLVFNWHSR*
Ga0070666_1101127613300005335Switchgrass RhizosphereAGDARLMKWMTAILLGLIIGTVLPTGMDLRSGVWMNNWTAWGTIHPHAGSPALLLSLPVFIGSAIFLRLVFNWHTR*
Ga0070682_10182866913300005337Corn RhizosphereRWGCWPEMKWVSALMLGAIVGIVLPTAIDARSGVWTNSWTGWGTVHPHAASPGLLLSIPLFLGSALFLRLVFNWHSR*
Ga0070668_10071294233300005347Switchgrass RhizosphereKWITALVLGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGSALAFRLVFNWHSR*
Ga0070671_10161218813300005355Switchgrass RhizosphereMKWISALLLGAILGFVLPTGLDMRSGVWMNSWAAWGTVHPHANSPGLLFSWPLFIGSAIAFRMVFNWHTR*
Ga0070671_10163298123300005355Switchgrass RhizosphereMKWLSALAFGAILGFVLPTGLDGRSGFWTHSWAGWGTIRPLEGSPGLLFSVPLFLGAAIALRLVFNWHSR*
Ga0070667_10205203313300005367Switchgrass RhizosphereLLGLIIGTILPTGMDLRSGVWMNNWTAWGTIHPHAGSPGLLLSLPVFIGSAIFLRLVFNWHTR*
Ga0070705_10164785923300005440Corn, Switchgrass And Miscanthus RhizosphereMKWITALVLGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGSALA
Ga0070694_10001115853300005444Corn, Switchgrass And Miscanthus RhizosphereMKWITALALGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGSALAFRLVFNWHSR*
Ga0070663_10131718623300005455Corn RhizosphereMKWITALAFGLILGILLPTMINGGEGMWTDSWAGWGTIHPHAGSPGLLLSIPVFLGSAFALRALFSWHS*
Ga0070662_10096551713300005457Corn RhizosphereTLWACWPDMKWMSALLLGAILGFVMPTGLDMRSGVWMNSWAAWGTVHPHANSPGLLFSWPLFIGSAIAFRMVFNWHTR*
Ga0070662_10119601613300005457Corn RhizospherePEMKWVSALMLGAIVGIVLPTAIDARSGVWTNSWTGWGTVHPHAGSPGLLLSIPLFLGSALFLRLVFNWHSR*
Ga0070681_1028141723300005458Corn RhizosphereMSALLLGAILGVVLPTALDARSGLWTNSWTGWGTIHPHAGSPGLLLSIPVWLGSALFLRLVFNWHSR*
Ga0068867_10160201523300005459Miscanthus RhizosphereAGDARLMKWMTAILLGLIIGTVLPTGMDLRSGVWMNNWTAWGTIHPHAGSPALLLSLPVFIGSAIFLRVVFNWHTR*
Ga0070697_10148890313300005536Corn, Switchgrass And Miscanthus RhizosphereGAILGFVLPTAMDLRSGLWMNNWTGWGTIHPHAGSPGLLFSIPLFLGSALAFRLVFNWHSR*
Ga0068853_10026831823300005539Corn RhizosphereMKWMTAILLGLIIGTVLPTGMDLRSGVWMNNWTAWGTIHPHAGSPALLLSLPVFIGSAIFLRVVFNWHTR*
Ga0070664_10091330813300005564Corn RhizosphereMKWVTALAFGAILGFVLPTALNGGEGVWMDSWAGWGTIRPHAASPGLLFSIPLFLGAAV
Ga0068864_10137259523300005618Switchgrass RhizosphereMKWMSALLLGAILGFVMPTGLDMRSGVWMNSWAAWGTVHPHANSPGLLFSWPLFIGSAIAFRMVFNWHTR*
Ga0068861_10097003813300005719Switchgrass RhizosphereMKWITALALGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGRLFSIPLFLGSALA
Ga0068861_10205351623300005719Switchgrass RhizosphereACWPEMKWMSALLLGAILGVVLPTALDARSGLWTNSWTGWGTIHPHAGSPGLLLSIPVWLGSALFLRLVFNWHSR*
Ga0068863_10004022283300005841Switchgrass RhizosphereLLGAILGVVLPTALDARSGLWTNSWTGWGTIHPHAGSPGLLLSIPLWLGSALFLRLVFNWHSR*
Ga0081201_10593023300006061Petroleum SedimentMKWASALLLGAILGFVLPTGLDMRSGVWMHSWAGWGTVHPHVNSPGLLFSWPLFLGSAIALRLVFNWHTR*
Ga0081201_10883013300006061Petroleum SedimentMKWASALLLGAILGFVLPTGLDMRSGVWMNSWAAWGTVHPHVNSPGLLFSWPLFAGSAIALRTVFQWHTR*
Ga0082029_148247513300006169Termite NestMKWISALALGALLGFVLPTGLDMRSGVWMHSWAAWGTIRPHAGSPGLLFSVPLFLGASIALRMVFNWHTR*
Ga0075421_10133936213300006845Populus RhizosphereCWPEMKWITALVLGAILGFVLPTALDLRSGVWMNNFVGWGTIRPHAGSPGLLFSIPLFLGSALALRLVFNCHSR*
Ga0075425_10082965833300006854Populus RhizosphereMKWITALALGAILGFVLPTAMDLRSGVWMNNWTSWGTIHPDVGSPALLFSIPLFLGSAMALRLVFNWHSR*
Ga0075424_10209258613300006904Populus RhizosphereLWRCWPEMKWITALVLGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGSALAFRLVFNWHSR*
Ga0105249_1295297923300009553Switchgrass RhizosphereMKWITALVLGAILGFVLPTALDLRSGVWMNNFVGWGTIRPHAGSPGLLFSIPLFLGSALALRLVFNWHSR*
Ga0126310_1092901513300010044Serpentine SoilMKWITSLVFGAILGFVLPTAMDLRSGLWMDSWTGWGTIRPLAGSPGLLLSIPLFLGSALGARLFYNWHDR*
Ga0134122_1264105023300010400Terrestrial SoilMKWMSALLLGAILGVVLPTALDARSGLWTNSWTGWGTIHPHAGSPGLLLSIPVWLGSALFLRLVFNWHSR*
Ga0153963_105893223300012070Attine Ant Fungus GardensMKWITALAFGAIVGIVLPTALNGGEGVWTDGWTGWGTFRPLPGSPGLLLSIPLFLISAIGLRFLFNWHDR*
Ga0157371_1155485013300013102Corn RhizosphereMKWITALAFGLILGIVLPTMMNGGEGLWTESWAGWGTIRPHAGSPGLLLSIPLFLGSALALRLVFSWHS*
Ga0157370_1042889643300013104Corn RhizosphereLILGILLPTMMNGGEGLWTDSWAGWGTIHPHAGSPGLLLSIPVFLGSACALRALFSWHS*
Ga0163162_1325300713300013306Switchgrass RhizosphereMKWITALVLGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGSALAFRL
Ga0157377_1033474423300014745Miscanthus RhizosphereMKWITALVLGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGAALAFRLVFNWHSR*
Ga0132258_1006831673300015371Arabidopsis RhizosphereMKWMSALLLGAVLGFVLPTGLDMRSNVWMNSWAAWGTVHPHANSPGLLFSWPLFIGSAIALRMVFNWHTR*
Ga0132258_1379121923300015371Arabidopsis RhizosphereMKWMTAILMGLIIGTVLPTGMDLRSGVWMNNWTAWGTIHPHAGSPGLLLSLPVFIGSAIFLRLVFNWHTR*
Ga0132256_10128031123300015372Arabidopsis RhizosphereMKWITALALGAILGFVLPTAMDLRAGVWMNNWTSWGTVHPHAGSPGLLFSIPLFLGSALALRLVFNWHSR*
Ga0132257_10186048223300015373Arabidopsis RhizosphereMKWMTAILMGLIIGTVLPTGMDLRSGVWMNNWTAWGTIHQHAGSPGLLLSLPVFIGSAIFLRLVFNWHTR*
Ga0132255_10211051823300015374Arabidopsis RhizosphereMKWMTAILMGLIIGTVLPTGMDLRSGVWMNNWTAWGTIHPHAGSPGLLLSLPVFIGSA
Ga0163161_1184472923300017792Switchgrass RhizosphereMKWMTAILLGLIIGTVLPTGMDLRSGVWMNNWTAWGTIHPHAGSPALLLSLPVFIGSAIFLRVVFNWHTR
Ga0190273_1102875333300018920SoilLDRAGMKWMTALLIGAILAIVLPTGFDGRSGQWMHSWAGWGTIRPLENSPGLLFSIPMFIGVAMFLRFVFSWHDR
Ga0196962_1031047913300024430SoilMKWLPALLLGAILGIVLPTGLDMRSGVWMHSWAAWGTIRPHAGSPGLLFSIPLFLGSA
Ga0207697_1004666723300025315Corn, Switchgrass And Miscanthus RhizosphereMKWITALVLGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGSALAFRLVFNWHSR
Ga0207697_1054847613300025315Corn, Switchgrass And Miscanthus RhizosphereMKWISALLLGALLGFVLPTGLDMRSGVWMHSWAAWGTVHPHVGSPGLLFSWPLFAGSAI
Ga0207682_1007231823300025893Miscanthus RhizosphereMKWMTAILLGLIIGTVLPTGMDLRSGVWMNNWTAWGTIHPHAGSPALLLSLPVFIGSAIFLRLVFNWHTR
Ga0207682_1046392723300025893Miscanthus RhizosphereMKWISALLLGALLGFVLPTGLDMRSGVWMHSWAAWGTVHPHVGSPGLLFSWPLFAGSAIALRLVFNWHTR
Ga0207688_1001824523300025901Corn, Switchgrass And Miscanthus RhizosphereMKWMTAILLGLIIGTILPTGMDLRSGVWMNNWTAWGTIHPHAGSPGLLLSLPVFIGSAIFLRLVFNWHTR
Ga0207647_1000182283300025904Corn RhizosphereMKWITALALGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGSALAFRLVFNWHSR
Ga0207647_1033550723300025904Corn RhizosphereMKWITALAFGLILGILLPTMMNGGEGLWTDSWAGWGTIHPHAGSPGLLLSIPVFLGSACALRALFSWHS
Ga0207705_1018978523300025909Corn RhizosphereMKWISALLLGALLGFVLPTGLDMRSGVWMHSWAAWGTVHPHVGSPGLLFSWPLFAGSAIALRTVFNWHTR
Ga0207707_1026567923300025912Corn RhizosphereMSALLLGAILGVVLPTALDARSGLWTNSWTGWGTIHPHAGSPGLLLSIPVWLGSALFLRLVFNWHSR
Ga0207657_1091920013300025919Corn RhizosphereMKWITALVLGAILGFVLPTALDLRSGVWMNNFVGWGTIRPHAGSPGLLFSIPLFLGSAL
Ga0207681_1083485023300025923Switchgrass RhizosphereMKWMSALLLGAILGFVMPTGLDMRSGVWMNSWAAWGTVHPHANSPGLLFSWPLFIGSAIAFRMVFNWHTR
Ga0207650_1041522213300025925Switchgrass RhizosphereRTPAGDARLMKWMTAILLGLIIGTILPTGMDLRSGVWMNNWTAWGTIHPHAGSPGLLLSLPVFIGSAIFLRLVFNWHTR
Ga0207659_1008231913300025926Miscanthus RhizosphereGFVLPTGLDMRSGVWMHSWAAWGTVHPHVGSPGLLFSWPLFAGSAIALRLVFNWHTR
Ga0207659_1053367713300025926Miscanthus RhizosphereGRTPAGDARLMKWMTAILLGLIIGTILPTGMDLRSGVWMNNWTAWGTIHPHAGSPGLLLSLPVFIGSAIFLRLVFNWHTR
Ga0207659_1174293413300025926Miscanthus RhizosphereLLLGAILGFVMPTGLDMRSGVWMNSWAAWGTVHPHANSPGLLFSWPLFIGSAIAFRMVFNWHTR
Ga0207701_1137800313300025930Corn, Switchgrass And Miscanthus RhizosphereMKWMSALLLGAILGFVMPTGLDMRSGVWMNSWAAWGTVHPHANSPGLLFSWPLFIGSAIAFRMVF
Ga0207644_1121551623300025931Switchgrass RhizosphereMKWLSALAFGAILGFVLPTGLDGRSGFWTHSWAGWGTIRPLEGSPGLLFSVPLFLGAAIALRLVFNWHSR
Ga0207690_1040703723300025932Corn RhizosphereMKWITALVLGAILGFVLPTALDLRSGVWMNNFVGWGTIRPHAGSPGLLFSIPLFLGSALALRLVFNWHSR
Ga0207706_1108340613300025933Corn RhizospherePEMKWVSALMLGAIVGIVLPTAIDARSGVWTNSWTGWGTVHPHAGSPGLLLSIPLFLGSALFLRLVFNWHSR
Ga0207704_1041131023300025938Miscanthus RhizosphereMKWITALVLGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPDAGSPGLLFSIPLFLGSALAFRLVFNWHSR
Ga0207667_1035959323300025949Corn RhizosphereMKWVTALAFGAILGFVLPTALNGGEGVWMDSWAGWGTIRPHAASPGLLFSIPLFLGAAVAARTF
Ga0207651_1032315713300025960Switchgrass RhizosphereAILLGLIIGTVLPTGMDLRSGVWMNNWTAWGTIHPHAGSPALLLSLPVFIGSAIFLRLVFNWHTR
Ga0207640_1189461313300025981Corn RhizosphereEMKWVSALMLGAIVGIVLPTAIDARSGVWTNSWTGWGTVHPHAGSPGLLLSIPLFLGSALFLRLVFNWHSR
Ga0207639_1057842423300026041Corn RhizosphereMKWITALAFGLILGILLPTMINGGEGMWTDSWAGWGTIHPHAGSPGLLLSIPVFLGSACALRALFSWHS
Ga0207675_10042145223300026118Switchgrass RhizosphereMKWITALALGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGRLFSIPLFLGSALAFRLVFNWHSR
Ga0207675_10103279223300026118Switchgrass RhizosphereMKWVSALMLGAILGVVLPTALDARSGLWTNSWTGWGTIHPHAGSPGLLLSIPVWLGSALFLRLVFNWHSR
Ga0207698_1014856333300026142Corn RhizosphereMKWITALALGAILGFVLPTAMDLRSGLLMDNWTGWGTIHPHAGSPGLLFSIPLFLGSALAFRLVFNWHS
Ga0268264_1045836223300028381Switchgrass RhizosphereMKWITALVLGAILGFVLPTAMDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGSAL
Ga0307288_1019683423300028778SoilMKWLPALLLGAILGIVLPTALDMRSGLWMDSWAAWGTIRPRADSPGLLLSIPVFLGAALA
Ga0310888_1017101323300031538SoilMKWITALVMGAILGFVLPTGFDGRSGQWMHSWAAWGTIRPLENSPALLFSIPLALGAAFALRAVFNWHSR
Ga0310888_1071355133300031538SoilLLLGALLGFVLPTGLDMRSGVWMHSWAAWGTVHPHVGSPGLLFSWPLFAGSAIALRLVFNWHTR
Ga0310888_1097930023300031538SoilMKWISALLLGAILGFVLPTGLDMRSGVWMNSWAAWGTVHPHVGSPGLLFSWPLFIGSAIALRTVFNWHTR
Ga0307408_10044815233300031548RhizosphereMSALLLGAILGIVLPTGLDMRSGVWMHSWAAWGTIRPHVNSPGLLFSIPLFLGSAIALRLVFNWHTR
Ga0307408_10122234023300031548RhizosphereMKWITALAFGLILGIVLPTMMNGGEGMWTDSWAGWGTIRPHAGSPGLLLSIPLFLGSAIALRLVFNWHSN
Ga0307408_10135458123300031548RhizosphereMKWISALALGALLGFVLPTGLDMRSGVWMHSWAAWGTIRPHVGSPGLLFSMPLFLGSAIALRMVFNWHTR
Ga0307405_1048942633300031731RhizosphereLGFVLPTGLDMRSGVWMHSWAAWGTIRPHLGSPGLLFSIPLFLGSAIALRMVFNWHTR
Ga0307468_10066660013300031740Hardwood Forest SoilMKWITALALGAILGFVLPTAVDLRSGLWMDNWTGWGTIHPHAGSPGLLFSIPLFLGSALAFRLVFNWHSR
Ga0307407_1094903823300031903RhizosphereFVLPTGLDMRSGVWMHSWAAWGTIRPHVGSPGLLFSVPLFLGSAIALRMVFNWHTR
Ga0307412_1032016033300031911RhizosphereALWECWPEMKWISALALGALLGFVLPTGLDMRSGVWMHSWAAWGTIRPHVGSPGLLFSIPLFLGSAIALRMVFNWHTR
Ga0307409_10052183933300031995RhizosphereMSALLLGAILGIVLPTGLDMRSGVWMHSWAAWGTIRPHAGSPGLLFSIPLFLGSATALRLVFNWHTR
Ga0307409_10096831013300031995RhizosphereMKWMSALLLGAILGIVLPTGLDMRSGVWMHSWAAWGTIRPHVNSPGLLFSIPLFLGSAIALRLVFNWHTR
Ga0308176_1026462223300031996SoilMKWITALAFGLILGIVLPTMMNGGEGLWTDSWAGWGTIRPLQGSPGLLLSIPLFLGSATALRLLFSWHS
Ga0310903_1071779313300032000SoilMGAILGFVLPTGFDGRSGQWMHSWAAWGTIRPLENSPALLFSIPLALGAAFALRAVFNWHSR
Ga0307416_10015486333300032002RhizosphereRPSSGSSKILWACWPEMKWMSALLLGAILGIVLPTGLDMRSGVWMHSWAAWGTIRPHVNSPGLLFSIPLFLGSAIALRLVFNWHTR
Ga0307411_1061456113300032005RhizosphereMKWISALALGALLGFVLPTGLDMRSGVWMHSWAAWGTIRPHVGSPGLLFSVPLFLGSAIALRMVFNWHTR
Ga0310902_1090198523300032012SoilMKWLSALFLGAILGVVLPTALDMRSGVWMNSFAGWGTIHPHAGSPGLLFSIPVFLG
Ga0307415_10001832173300032126RhizosphereMKWISALALGALLGFVLPTGLDMRSGVWMHSWAAWGTIRPHVGSPGLLFSIPLFLGSAIALRMVFNWHTR
Ga0310896_1056791623300032211SoilMKWLSALFLGAILGVVLPTALDMRSGVWMNSFAGWGTIHPHAGSPGLLFSIPVFLGSAIFLRA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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