Metagenome / Metatranscriptome Family F094435

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094435
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	103 residues
Representative Sequence	MISNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGRHPGDNLYRASA
Number of Associated Samples	100
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.74 %
% of genes near scaffold ends (potentially truncated)	47.17 %
% of genes from short scaffolds (< 2000 bps)	94.34 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.057 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (7.547 % of family members)
Environment Ontology (ENVO)	Unclassified (28.302 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.906 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 5.30% Coil/Unstructured: 44.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00196	GerE	8.49
PF01145	Band_7	1.89
PF01841	Transglut_core	1.89
PF13408	Zn_ribbon_recom	0.94
PF04960	Glutaminase	0.94
PF01027	Bax1-I	0.94
PF04392	ABC_sub_bind	0.94
PF07369	DUF1488	0.94
PF07589	PEP-CTERM	0.94
PF06411	HdeA	0.94
PF01042	Ribonuc_L-PSP	0.94
PF09361	Phasin_2	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.94
COG2066	Glutaminase	Amino acid transport and metabolism [E]	0.94
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.06 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.06 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.06 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	98.11 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	90.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	71.70 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	14.15 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.89 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.94 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	66.04 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.15 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.72 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1.89 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	0.94 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.94 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Aquibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium	66.04 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.15 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.72 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1.89 %
Alteromonas/Salinimonas group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group	0.94 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.94 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Aquibium carbonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	66.04 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.15 %
Bradyrhizobium ottawaense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	2.83 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1.89 %
Sphingobium quisquiliarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium quisquiliarum	0.94 %
Alteromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas	0.94 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Aquibium carbonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	66.04 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.15 %
Bradyrhizobium ottawaense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	2.83 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1.89 %
Alteromonas macleodii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas → Alteromonas macleodii	0.94 %
Sphingobium quisquiliarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium quisquiliarum	0.94 %
Unclassified	root	N/A	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig67060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
2199352025\|deepsgr__Contig_151410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	559	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100616816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	567	Open in IMG/M
3300000956\|JGI10216J12902_102018175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	518	Open in IMG/M
3300003505\|JGIcombinedJ51221_10454768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas → Alteromonas macleodii	517	Open in IMG/M
3300004479\|Ga0062595_101672923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300005328\|Ga0070676_11621377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	500	Open in IMG/M
3300005343\|Ga0070687_101322938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	536	Open in IMG/M
3300005367\|Ga0070667_102315624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300005446\|Ga0066686_10668907	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300005535\|Ga0070684_100860539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	849	Open in IMG/M
3300005539\|Ga0068853_101526879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	647	Open in IMG/M
3300005555\|Ga0066692_10673165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	644	Open in IMG/M
3300005564\|Ga0070664_100658574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	973	Open in IMG/M
3300005564\|Ga0070664_100671935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	963	Open in IMG/M
3300005578\|Ga0068854_101411274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	630	Open in IMG/M
3300005610\|Ga0070763_10818712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium quisquiliarum	551	Open in IMG/M
3300006034\|Ga0066656_10162813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1402	Open in IMG/M
3300006041\|Ga0075023_100233421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	727	Open in IMG/M
3300006050\|Ga0075028_100070728	All Organisms → cellular organisms → Bacteria → Proteobacteria	1723	Open in IMG/M
3300006057\|Ga0075026_100357181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	811	Open in IMG/M
3300006059\|Ga0075017_100281096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	1224	Open in IMG/M
3300006086\|Ga0075019_10113383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	1565	Open in IMG/M
3300006163\|Ga0070715_10843142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	560	Open in IMG/M
3300006175\|Ga0070712_100040965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3177	Open in IMG/M
3300006196\|Ga0075422_10278849	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300006852\|Ga0075433_11102708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300006852\|Ga0075433_11123084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	683	Open in IMG/M
3300006854\|Ga0075425_100695528	All Organisms → cellular organisms → Bacteria → Proteobacteria	1168	Open in IMG/M
3300006893\|Ga0073928_10137078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1992	Open in IMG/M
3300006904\|Ga0075424_102535426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300006950\|Ga0075524_10349818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	650	Open in IMG/M
3300007255\|Ga0099791_10309144	All Organisms → cellular organisms → Bacteria → Proteobacteria	754	Open in IMG/M
3300007614\|Ga0102946_1092355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1014	Open in IMG/M
3300007619\|Ga0102947_1009103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2799	Open in IMG/M
3300007757\|Ga0102949_1052570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	982	Open in IMG/M
3300007982\|Ga0102924_1336479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	588	Open in IMG/M
3300009137\|Ga0066709_104660016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	501	Open in IMG/M
3300009143\|Ga0099792_10390947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	849	Open in IMG/M
3300009156\|Ga0111538_11616675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	817	Open in IMG/M
3300009157\|Ga0105092_10612804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M
3300009162\|Ga0075423_10685768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	1081	Open in IMG/M
3300009506\|Ga0118657_10137089	All Organisms → cellular organisms → Bacteria	3517	Open in IMG/M
3300009506\|Ga0118657_10306098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	2135	Open in IMG/M
3300009824\|Ga0116219_10396763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	769	Open in IMG/M
3300010335\|Ga0134063_10272649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	809	Open in IMG/M
3300012203\|Ga0137399_11531835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	554	Open in IMG/M
3300012353\|Ga0137367_10879002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	618	Open in IMG/M
3300012683\|Ga0137398_11047001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	564	Open in IMG/M
3300012683\|Ga0137398_11267828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	500	Open in IMG/M
3300012685\|Ga0137397_10999167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	616	Open in IMG/M
3300012957\|Ga0164303_10138549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	1270	Open in IMG/M
3300012957\|Ga0164303_10651754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	702	Open in IMG/M
3300012986\|Ga0164304_11148120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	624	Open in IMG/M
3300012988\|Ga0164306_10297132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	1177	Open in IMG/M
3300013105\|Ga0157369_12704667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	500	Open in IMG/M
3300013307\|Ga0157372_11851408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	694	Open in IMG/M
3300014264\|Ga0075308_1179812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	502	Open in IMG/M
3300014270\|Ga0075325_1039024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	971	Open in IMG/M
3300014271\|Ga0075326_1016725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1780	Open in IMG/M
3300014272\|Ga0075327_1235278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	594	Open in IMG/M
3300015371\|Ga0132258_12923828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	1186	Open in IMG/M
3300015372\|Ga0132256_100988805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	957	Open in IMG/M
3300017955\|Ga0187817_10934179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	555	Open in IMG/M
3300017994\|Ga0187822_10181666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	692	Open in IMG/M
3300017995\|Ga0187816_10452545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	575	Open in IMG/M
3300018001\|Ga0187815_10294086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	688	Open in IMG/M
3300018077\|Ga0184633_10407074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300018081\|Ga0184625_10172591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	1131	Open in IMG/M
3300021168\|Ga0210406_10476731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	990	Open in IMG/M
3300021403\|Ga0210397_10239824	Not Available	1312	Open in IMG/M
3300021407\|Ga0210383_10883264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	762	Open in IMG/M
3300021475\|Ga0210392_10934596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	649	Open in IMG/M
3300021477\|Ga0210398_10886077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	716	Open in IMG/M
3300022467\|Ga0224712_10524402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	574	Open in IMG/M
3300025315\|Ga0207697_10157880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	988	Open in IMG/M
3300025906\|Ga0207699_11327449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	532	Open in IMG/M
3300025915\|Ga0207693_10590093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	865	Open in IMG/M
3300025939\|Ga0207665_11515374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	533	Open in IMG/M
3300025945\|Ga0207679_10281941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	1425	Open in IMG/M
3300026035\|Ga0207703_11504259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300026041\|Ga0207639_11833929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	567	Open in IMG/M
3300026111\|Ga0208291_1001432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3810	Open in IMG/M
3300026360\|Ga0257173_1043125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300027073\|Ga0208366_1000050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4344	Open in IMG/M
3300027873\|Ga0209814_10537922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	519	Open in IMG/M
3300027894\|Ga0209068_10783532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	561	Open in IMG/M
3300027910\|Ga0209583_10459648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	620	Open in IMG/M
3300030563\|Ga0247653_1069830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	558	Open in IMG/M
3300030619\|Ga0268386_10215371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1431	Open in IMG/M
3300030969\|Ga0075394_10729642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	517	Open in IMG/M
3300030990\|Ga0308178_1175393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	506	Open in IMG/M
3300031170\|Ga0307498_10441632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	520	Open in IMG/M
3300031184\|Ga0307499_10316625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	519	Open in IMG/M
3300031231\|Ga0170824_122883031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	544	Open in IMG/M
3300031360\|Ga0307444_1048850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1399	Open in IMG/M
3300031364\|Ga0307445_10151098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	840	Open in IMG/M
3300031715\|Ga0307476_11439306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	501	Open in IMG/M
3300031720\|Ga0307469_11776838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	595	Open in IMG/M
3300031740\|Ga0307468_100286629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	1185	Open in IMG/M
3300031740\|Ga0307468_100904214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	766	Open in IMG/M
3300031820\|Ga0307473_11331258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	539	Open in IMG/M
3300031962\|Ga0307479_11040572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	787	Open in IMG/M
3300032160\|Ga0311301_11908021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	700	Open in IMG/M
3300032180\|Ga0307471_101125015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	951	Open in IMG/M
3300032205\|Ga0307472_100924970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	810	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.30%
Host-Associated	Host-Associated	20.75%
Engineered	Engineered	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.43%
Plants	Host-Associated → Plants	20.75%
Aquatic	Environmental → Aquatic	18.87%
Modeled	Engineered → Modeled	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.09%
Sediment	Environmental → Aquatic → Sediment	8.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.66%
Freshwater	Environmental → Aquatic → Freshwater	4.72%
Marine	Environmental → Aquatic → Marine	3.77%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.89%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.45%
Loam	Environmental → Terrestrial → Soil → Loam	9.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.49%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.77%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.89%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.49%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.89%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.89%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.72%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	4.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.89%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	1.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007614	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_D1_MG	Environmental	Open in IMG/M
3300007619	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_D2_MG	Environmental	Open in IMG/M
3300007757	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D1_MG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014264	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2_rd	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026111	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300030563	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb6 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031360	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-40	Environmental	Open in IMG/M
3300031364	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-30	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0060.00004570	2166559005	Simulated	LDFLVCGRLALFVTTQIAAEEHAVLGQGNVSCGSWLNTIARGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGRHP
deepsgr_02489880	2199352025	Soil	MNSNWAPLFVAGSLLVLTTDIAAQEQAVLGQGNVSCGSWLNDRKVMTLASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGRHP
INPhiseqgaiiFebDRAFT_1006168161	3300000364	Soil	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEXIMAWIDXYCGRHPXDNLYRASAALVDXXRXKLGR*
JGI10216J12902_1020181752	3300000956	Soil	MNSNWAPLFVALLFLTTQIAAQEQAVLGQGNVSCGSWLNDRKGDDAQASSKIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHPSDNLYRA
JGIcombinedJ51221_104547681	3300003505	Forest Soil	MKIHGTALVAASLLWALTTEMAAQEQAVLGQGNISCGSWLENRKGGDAQGTTRIAWILGYVTAYNQYGSKPQGDVSGGKGTEEIAAWID
Ga0062595_1016729231	3300004479	Soil	MNSNWAPLFVAGSLLILTTDIAAQEHAVLGQGNVSCGSWLNDRKGDDANASSRIAWVLGYVTAFNQYESKPAGDVSGGKSTEEIMARIDNYCGQHPSDNLFRASAALVDEFRQKLGR*
Ga0070676_116213771	3300005328	Miscanthus Rhizosphere	MISNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKSEDAASSRIAWVLGYVTGFNQYGSKPEGDVTGGKGTEEIMTWIDNYCGRHPGDNLY
Ga0070687_1013229382	3300005343	Switchgrass Rhizosphere	MISNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCSSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWID
Ga0070667_1023156242	3300005367	Switchgrass Rhizosphere	MNSNWAPLFVAGSLLILTTDIAAQEHAVLGQGNVSCGSWLNDRKGDDANASSRIAWVLGYVTAFNQYESKPAGDVSGGKSTEEIM
Ga0066686_106689072	3300005446	Soil	MNSNWAPLFVAGSLLFLTIQIAAQEHAVLGQGNVSCGSWLNDRKGDGDGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEE
Ga0070684_1008605392	3300005535	Corn Rhizosphere	MNSNWAPLFVAGSLIVLTTDIAAQEQAVLGQGNVSCGSWLNDRKGDDTDASSRIAWVLGYVTAFNQYGSKPAGDVSGAKGTEEIMAWIDSYCGRHPSDNLYRASAALVDELRHKLGR*
Ga0068853_1015268791	3300005539	Corn Rhizosphere	MISNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGRHPGDNLYRASA
Ga0066692_106731652	3300005555	Soil	MNSNWAPLFVAGSLLFLTIQIAAQEHAVLGQGNVSCGSWLNDRKGDGDGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHPSNNLYRASAALVDEFRQKLGR*
Ga0070664_1006585741	3300005564	Corn Rhizosphere	MNSNWAPLFVAGSLLVLTTAQEQAVLGQGNVSCGSWLNDRKGDDTDASSRIAWVLGYVTAFNQYGSKPAGDVSGAKGTEEIMAWIDSYCGRHPSDNLYRASAALVDELRHKLGR*
Ga0070664_1006719354	3300005564	Corn Rhizosphere	MNSNWAPLFVAGSLIVLTTDIAAQEQAVLGQGNVSCGSWLNDRKGDDTDASSRIAWVLGYVTAFNQYGSKPAGDVSGA
Ga0068854_1014112742	3300005578	Corn Rhizosphere	MTSNWTSLFVAGLLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDDYCGRHPGDNLYRASAALVDELRRKLGR*
Ga0070763_108187121	3300005610	Soil	MTSNWTSLFVAGLLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRNGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKSTEEIMTWIDNYCDRHADDNLYRASAALVDELRRKLGR*
Ga0066656_101628132	3300006034	Soil	MNSNWAPLFVAGSLLFLTAQIAAQEDAVLGQGNVSCGSWLNDRKGDGAGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHPSDNLYRASAALVDDFRQKLGR*
Ga0075023_1002334211	3300006041	Watersheds	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDV
Ga0075028_1000707281	3300006050	Watersheds	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVTGGKGTEEIMAWIDNYCGRHPGDN
Ga0075026_1003571811	3300006057	Watersheds	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVTGGKGTEEIMAWIDNYCGRHPGDNLY
Ga0075017_1002810961	3300006059	Watersheds	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVTGGKGTEEIM
Ga0075019_101133834	3300006086	Watersheds	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVTGGKGTEEIMAWIDNYCGRHPG
Ga0070715_108431422	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LFVTTQIAAEEHAVLGQGNVSCSSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTCPNPVQS*
Ga0070712_1000409651	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNSNWAPMFVASSLLQGNVSCGSWLNDRKGDDARASSRTAWVLGYVTAFN*
Ga0075422_102788492	3300006196	Populus Rhizosphere	MNSNWAPLFVAGSLLILTTDIAAQEHAVLGQGNVSCGSWLNDRKGDDANASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHPSDNL
Ga0075433_111027082	3300006852	Populus Rhizosphere	MNSNWAPLFVAGCLLFLTTQIAAQEHAVLGQGNVSCGSWLNDRKGDGAGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKDTEEIMTWIDNYCGQHSSDNLYRASAALVDEFRQKLGR*
Ga0075433_111230842	3300006852	Populus Rhizosphere	MTSNWTSLFVAGLLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKREDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHSSNNLYRASAALVDEFRQKLGR*
Ga0075425_1006955282	3300006854	Populus Rhizosphere	MSFNWAPLFVASCLLFLTTQIAAQAHAVLGQGNVSCGSWLDDRKGDGSGAPSRIAWVLGYVTAFNQYGSKPEGDVSGGKDTEEIMAWIDSYCGQHSSNNLYRASAALVDEFRQKLGR*
Ga0073928_101370781	3300006893	Iron-Sulfur Acid Spring	MNSNWAPLFVAGSLLVLTTDIAAQEQAVLGQGNVSCGSWLNDRKGDDTDVSSRIAWVLGYVTAFNQYESKPAGDVSGAKGTEEIMAWI
Ga0075424_1025354261	3300006904	Populus Rhizosphere	MHSSWAPLFAAGWLLFLNSQIAAQEHAVLGQGNVSCVSWLNERKGDGVGPSSRIAWVLGYVTAFNQYGSKPEGDVSGGKDTEEIMAWIDNYCGQHSSDNLYRASAALVDEFRQKLGR*
Ga0075524_103498182	3300006950	Arctic Peat Soil	MNSNWVPLFVAGSLSILTTTDISAQEQHAVLGQGNISCSSWLNDHKGNDALASSRIAWVLGYVTAFNEYESNPTRDVSGGKSTEEITAWIDSYCGQHPTDTLYRASAALVDEFRQKLKR*
Ga0099791_103091442	3300007255	Vadose Zone Soil	LIEKAGYWFGIHPGNPGLIARCNMNSNCAPLFVAGCLLFLTSQIAAQEHAVLGQGNVSCGSWLNDRKGDGAGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEE
Ga0102946_10923551	3300007614	Soil	MNFNWVLLPAACLLLFPITQIAAQEQAVLGQGNVSCDAWLIDRRENNAQASGRIAWILGYVTAFNQYGSKPAGDVSAGMDTDEIMVWIDDHCEQHPDDNLYRASAAFVEDFRQKLGR*
Ga0102947_10091038	3300007619	Soil	MNFNWALLPAACLLLFPITQIAAQEQAVLGQGNVSCDAWLSDRRDNSAQASGRIAWIVGYITAFNQ
Ga0102949_10525702	3300007757	Soil	MNFNWALLPAACLLLFPITQIAAQEQAVLGQGNVSCDAWLIDRRENNAQASGRIAWILGYVTAFNQYGSKPAGDVSAGMDTDEIMVWID
Ga0102924_13364792	3300007982	Iron-Sulfur Acid Spring	MTSNWTSLFVAGLLLFVTTQIAAEEHAVLGQGNVSCRSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVTGGKGNEEIMAWIDNYCGRHPGDNL
Ga0066709_1046600161	3300009137	Grasslands Soil	MNSNWAPLFVAGSLLFLTIQIAAQEHAVLGQGNVSCGSWLNDRKGDGDGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHPSNNLYRASAALVNEFRQKLGR*
Ga0099792_103909472	3300009143	Vadose Zone Soil	MNYSWAPWFVAGCLLFLTSQIAAQEHAVLGQGNVSCGSWLNDRKGDGAGESSRIAWVLGYVTAFNQFGSKPEGDVSGGKDTEEIMAWIDNYCGQHSGDNLYRASAALVDEFRQKLGR*
Ga0111538_116166751	3300009156	Populus Rhizosphere	MNSNWAPLFVAGSLLILTTDIAAQEHAVLGQGNVSCGSWLNDRKGDDANASSRIAWVLGYVTAFNQYESKPAGDVS
Ga0105092_106128041	3300009157	Freshwater Sediment	LLAQEHGVLGQGKVSCGSWLDRKGDDANTSSRIAWVLGYVTAFNKYESKPAGDISEGKGTEEIMAWIDIYCGQHPSDNLYRASAALVDEFRQKLGR*
Ga0075423_106857682	3300009162	Populus Rhizosphere	LFVAGSLLILTTDIAAQEHAVLGQGNVSCGSWLNDRKGDDANASSRIAWVLGYVTAFNQYGSKPEGDVSGGKSTEEIMARIDNYCGQHPSDNLFRASAALVDEFRQKLGR*
Ga0118657_101370894	3300009506	Mangrove Sediment	MVQELQIGGTSLIARFNMKCSWMPLIVICSLLLPTTQIAAQEQAVLGQGNVSCNDWLNARRDNSAQASSRIAWILGYVTGFNQYGSKPAGDVSGGMGTEELMMWIDDYCGQHLNDNLYRASAAFVNEFNQMRGR*
Ga0118657_103060983	3300009506	Mangrove Sediment	MNSNWAPLFVACSLLFPITQIAAQEQAVLGQGNVSCKAWLNERRGNDAQVSSRTAWILGYVTAFNQYESKPAGDVSAGMGTDEIVAWIDDHCSQHPDDNLYRASATFVDEFRQKLGR*
Ga0116219_103967631	3300009824	Peatlands Soil	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSKIAWVLGYVTGFNQYGSKPEGDVSSGKGTEEIMAWIDNYCGRHPGDNLYRA*
Ga0134063_102726491	3300010335	Grasslands Soil	MNSNWAPLFVAGSLLFLTIQIAAQEHAVLGQGNVSCGSWLNDRKGDGAGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHPSDNLYRASAALVDDFRQKLGR*
Ga0137399_115318351	3300012203	Vadose Zone Soil	MNSNWAPLFVAGSLLVLTTDIAAQEQAVLGQGNVSCGSWLNDRKGDGAGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHSSNNLYRASAALVDEFRQKLGR*
Ga0137367_108790021	3300012353	Vadose Zone Soil	LFVALLFLTTQIAAQEQAVLGQGNVSCGSWLNDRKGDDAQASSKIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDN
Ga0137398_110470011	3300012683	Vadose Zone Soil	MSFNCAPWFVAGCLLFLTSQIAAQEHAVLGQGNVSCGSWLNDRKGDGAGESSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHSGDNLYRASAALVDEFRQKLGR*
Ga0137398_112678282	3300012683	Vadose Zone Soil	MKFQCGSMLLAGSLLFPIAQLAAQEQAVLGQGNVSCGSWLNNGKGDDAQASNRTAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIKAWIDKYCGQHPSDNLYR
Ga0137397_109991672	3300012685	Vadose Zone Soil	LIEKAGYWFGIHPGNPGLIARCNMNSNCAPLFVAGCLLFLTTQIAAQEHAVLGQGNVSCGSWLNDRKGDGAGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHPSDNLERASAA
Ga0164303_101385491	3300012957	Soil	NPGSIARRSMTSNWTSLFLAGSLLFVTTQIAAEEHAVLGQGNVSCRSWLNDRKGEDAASSRIAWVIGYVTGFNQYGSKPEGDVSGGKGTEDIMAWIDNYCGRHPDDNLYRASAALVDEFRQKLGR*
Ga0164303_106517543	3300012957	Soil	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCSSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTCPNPVQS*
Ga0164304_111481202	3300012986	Soil	LFVAGSLLFVTTQIAAEEHAVLGQGNVSCSSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDDYCGRHPGDNLYRASAALVDDLRRKLGR*
Ga0164306_102971323	3300012988	Soil	MTSNWTSLFVAGLLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMTWIDNYCDRHADDNLYRASAALVDEFRQKLGR*
Ga0157369_127046671	3300013105	Corn Rhizosphere	MISNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEE
Ga0157372_118514081	3300013307	Corn Rhizosphere	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCSSWLNDRKGEDAVSSRIAWVLGYVTGFNQYGSKPEGDVTGGKGTEEIMTWIDNY
Ga0075308_11798121	3300014264	Natural And Restored Wetlands	MNYNFMPLAAACSLLLLTTHVAAQEQAVLGQGNVSCNDWLVGRQGNDAQASSRIAWILGYVTGFNQYGSNPPGDVSGGMDTEKIMVWIDDHCGEYPDDNLYKASAAFVNEFN*
Ga0075325_10390241	3300014270	Natural And Restored Wetlands	MRLLQVVQELQIGGTSLIARSNMKCSWMTLIVTCSLLLPTTQVAAQEQAVLGQGNVSCNDWLNARRGNTAPASSRVAWILGYVTGFNQYGSKPAGDVSGGMGTEELMMWIDDYCGQNPNDNLYRASAAFVNEFSQMRRR*
Ga0075326_10167252	3300014271	Natural And Restored Wetlands	MRLLQVVQELQIGGTSLIARSNMKCSWMTLIVTCSLLLPTTQVAAQEQAVLGQGNVSCNDWLNARRGNTAQASSRVAWILGYVTGFNQYGSKPAGDVSGGMGTEELMMWIDDYCGQNPNDNLYRASAAFVNEFSQMRGR*
Ga0075327_12352781	3300014272	Natural And Restored Wetlands	MNCNWVPLFVACSLLLPTTQIAAQEQAVLGQGNVSCDAWLNDRRGNDAQASSRAAWILGYVTAFNQYGSKPEGDVSGGM
Ga0132258_129238281	3300015371	Arabidopsis Rhizosphere	MNSNWAPLFVAGSLLVLTTDIAAQEQAVLGQGNVTCGSWLNDRKGDDTDASSRIAWVLGYVTAFNQYGSKPAGDVSGAKGTEEIMAWIDNYCGRRPSDS
Ga0132256_1009888052	3300015372	Arabidopsis Rhizosphere	MNSNWAPLFVAGSLLVLTTDIAAQEQAVLGQGNVSCGSWLNDRKGDDTDASSRIAWVLGYVTAFNQYGSKPAGDVSGAKGTEEIMAWIDNYSGRHPSDNLRRASAALVDEFRHKLGR*
Ga0187817_109341791	3300017955	Freshwater Sediment	MTFNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVTGGKGTEE
Ga0187822_101816661	3300017994	Freshwater Sediment	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMTWIDNYCDRHADDNLYRASAALVDEFRQKLGR
Ga0187816_104525451	3300017995	Freshwater Sediment	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVS
Ga0187815_102940862	3300018001	Freshwater Sediment	MNSNWAPFFVAGSLLILTTDIAAQEHAVLGQGNVSCSSWLNDRKGDDTNASSRIAWVLGYVTAFNQYESKPAGDVSGGKGTEEIMAWIDSYCGQHPSDNLYRASAALVDEFRHKLER
Ga0184633_104070741	3300018077	Groundwater Sediment	MNSNWALLFVALLFLTTQIAAQEQAVLGQGNVSCGSWLNDRKVDDAQASSKIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHPSDNLYRASAALVDEFRQKLGR
Ga0184625_101725911	3300018081	Groundwater Sediment	MSFNCAPWFVAGCLLFLTSQIAAQEHAVLGQGNVSCGSWLNDRKGDGAGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHSGDNLYRASAALVDEFRQKLGR
Ga0210406_104767313	3300021168	Soil	MKFQCGSMLLAGSLLFPIAQLAAQEQAVLGQGNVSCGSWLNNGKGDDAQTSNRTAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIKAWIDKYCGQHPSDN
Ga0210397_102398242	3300021403	Soil	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTCPNPVQS
Ga0210383_108832642	3300021407	Soil	MTSNWTSLFLAGSLLFVTTQIAAEEHAVLGQGNVSCRSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMVWIDNYCG
Ga0210392_109345961	3300021475	Soil	MTSNWPSLFLAGSLLFVTTQIAAEEHAVLGQGNVSCRSWLNDRKGEDPTSSRIAWVLGYVTGFNQYGSKPEGDVSGGKG
Ga0210398_108860773	3300021477	Soil	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCRSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTCPNPVQS
Ga0224712_105244021	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MNSNWAPLFVAGSLLVLTTAQEQAVLGQGNVSCGSWLNDRKGDDTDASGRIAWVLGYVTAFNQYGSKPAGDVSGAKGTEEIMAW
Ga0207697_101578803	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MNSNWAPLFVAGSLLVLTTDIAAQEQAVLGQGNVSCGSWLNDRKGDDTDASGRIAWVLGYVTAFNQYGSKPAGDVSGAKGTEEIMAWIDNYCGQHRSDNLY
Ga0207699_113274491	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTSNWTSLFVAGLLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTCPNPVQS
Ga0207693_105900933	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTSNWTFLFVAGSLLFVTTQITAEEDAVLGQGNVSCGSWLNDRKSEDAASSRIAWVLGYVTGFNQYGSKPEGDISGGKGTEEIMAWIDNYC
Ga0207665_115153741	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTSNWTSLFVAGLLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGT
Ga0207679_102819413	3300025945	Corn Rhizosphere	MNSNWAPLFVAGSLIVLTTDIAAQEQAVLGQGNVSCGSWLNDRKGDDTDASSRIAWVLGYVTAFNQYGSKPAGDVSGAKGTEEIMAWIDSYCGRHPSDNLYRASAALVDELRHKLGR
Ga0207703_115042591	3300026035	Switchgrass Rhizosphere	MTSNWTSLFVAGLLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDDYCGRHPGDNLYGASAALVDELRQKLGR
Ga0207639_118339292	3300026041	Corn Rhizosphere	MISNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGRHPGDNLY
Ga0208291_10014326	3300026111	Natural And Restored Wetlands	MKCSWMTLIVTCSLLLPTTQVAAQEQAVLGQGNVSCNDWLNARRGNTAQASSRVAWILGYVTGFNQYGSKPAGDVSGGMGTEELMMWIDDYCGQNPNDNLYRASAAFVNEFSQMRGR
Ga0257173_10431251	3300026360	Soil	MESRRTALVGASLLWALTAQTAAQEQAVLGQGNVSCGSWLENRRGDDAQVSARTASILGYITAFNQYGSKQQGDVSGGKGTEEMTAWIDDYCRHHPADNLYRASAALIDEFKQQTGR
Ga0208366_10000502	3300027073	Forest Soil	MNSNWAPLFVASSLLFLTTQIAAQEHAVLGQGNVSCGSWLNDRRGEDAALSRIAWVLGYVTGFNQYGSKPEGDVSGGKATEVLMARIDDHCKRHPLENLYNASAALVDELRQ
Ga0209814_105379222	3300027873	Populus Rhizosphere	LLILTTDIAAQEHAVLGQGNVSCGSWLNDRKGDDANASSRIAWVLGYVTAFNQYGSKPEGDVSGGKDTEEIMAWIDNYKWPTSWRQSL
Ga0209068_107835321	3300027894	Watersheds	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVTGGKGTEEIMAWIDNYCGRHPGDNLYRASAA
Ga0209583_104596481	3300027910	Watersheds	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRTGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAW
Ga0247653_10698301	3300030563	Soil	MRIHGAAGLAAILLVFSTVQIAAQEQAVLGQGNVSCGTWLEDRSDGGQVMARIAWVLGYITAFNQYGSKPEGDVSGGKSTEQMTVWIENHCKQHPADNVYRASAALVDELRRRIGR
Ga0268386_102153712	3300030619	Soil	MNCNWVPLFVACSLLLPTTQIAAQEQAVLGQGNVSCDAWLNDRRGNDAQASSRAAWILGYVTAFNQYGSKPEGDVSGGMSAGEIMVWIDDHCGQHPDDNLYRASAAFVDEFRQKLGR
Ga0075394_107296421	3300030969	Soil	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRTGEDAASSRIALVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGRHPGDNLYRASAALVDEFRQKLGR
Ga0308178_11753931	3300030990	Soil	NALSASPDRQLIQHHPGNPGLIARWNMNSNWAPLFVAGSLLFLTTQIAAQEDAVLGQGNVSCGSWLNDRKGDGAGASSRTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHPSDNLYRASAALVNEFRQKLGR
Ga0307498_104416321	3300031170	Soil	MTSNWTSLFVAGLLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVTGGKGTEEIMTW
Ga0307499_103166251	3300031184	Soil	MNSNWAPLFAAGSLLFLTTQIAAQEDAVLGQGNVSCGSWLNDRKGDGAGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCG
Ga0170824_1228830312	3300031231	Forest Soil	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRTGEDAASSRIALVLGYVTGFNQYGSKPEGDVSGP
Ga0307444_10488502	3300031360	Salt Marsh	MNSIWVPLIVVGSLFLLNTQIAAQENEHAVLGQGNVSCGSLRNDRKGDDAQAPSRTAWVLGYVTAFNEYGSKPQGDISEGKSTEEIMAWIDKYCAQHPSDNLYSASAALVHEFRQKLGR
Ga0307445_101510982	3300031364	Salt Marsh	MNSNWAPLFVAGSFLFLTTQIAAQEQAVLGQGNVSCGSWLNDRKDESPQASSRIAWVLGYVTAFNQYGSKPKGDVSGGKDTEEIMAWIGNYCGQHPSDDLYRASAALVDELRQKPGR
Ga0307476_114393061	3300031715	Hardwood Forest Soil	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCASWLNDRKGEEAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMVWIDNYCGRHPDDNLYRASAALVDEFRQKLGR
Ga0307469_117768381	3300031720	Hardwood Forest Soil	MNSNWAPLFAAGSLLFLTAQIAAQEDAVLGQGNVSCGSWLNDRKGDGAGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGEHPSNNLYRASAALVNEFRQKLGR
Ga0307468_1002866291	3300031740	Hardwood Forest Soil	MNSNWAPLFAAGSLLFLTAQIAAQEDAVLGQGNVSCGSWLNDRKGDGAGASSRIAWVLGYVTAFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHPSNNLYRASAALVNEFRQKLGR
Ga0307468_1009042142	3300031740	Hardwood Forest Soil	GSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMVWIDDYCGRHPGDNLYRASAALVDELRRKLGR
Ga0307473_113312581	3300031820	Hardwood Forest Soil	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCRSWLNDREGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGRHPDDNLYRASASLVDEFRQKLGR
Ga0307479_110405722	3300031962	Hardwood Forest Soil	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRTGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDDYCGRHPGDNLYRASAALVDELRRKLGR
Ga0311301_119080211	3300032160	Peatlands Soil	MTSNWTSLFVAGSLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRTGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTE
Ga0307471_1011250153	3300032180	Hardwood Forest Soil	MTSNWTSLFVAGLLLFVTTQIAAEEHAVLGQGNVSCGSWLNDRKGEEAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDDYCGRHPGDNLYRASAALVDELRRKLGR
Ga0307472_1009249702	3300032205	Hardwood Forest Soil	MSFNWAPLFAAGCILFLTTQIAAQEHAVLGQGNVSCGSWLNDRKGEDAASSRIAWVLGYVTGFNQYGSKPEGDVSGGKGTEEIMAWIDNYCGQHSSNNLYRASAALVDEFRQKLGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094435

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences