NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F094368

Metagenome Family F094368

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F094368
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 63 residues
Representative Sequence MADRIPYLDAEVKPPEYRVPRGRSGVGAQSALETLLRDLERIRRAKEAYGDLPRQPEHWQFRF
Number of Associated Samples 66
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 33.96 %
% of genes near scaffold ends (potentially truncated) 24.53 %
% of genes from short scaffolds (< 2000 bps) 82.08 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (91.509 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(24.528 % of family members)
Environment Ontology (ENVO) Unclassified
(31.132 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.283 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.47%    β-sheet: 0.00%    Coil/Unstructured: 72.53%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF01814Hemerythrin 13.21
PF00005ABC_tran 5.66
PF08002DUF1697 4.72
PF00072Response_reg 3.77
PF04264YceI 3.77
PF04020Phage_holin_4_2 3.77
PF13628DUF4142 2.83
PF07519Tannase 2.83
PF03401TctC 1.89
PF01557FAA_hydrolase 1.89
PF00903Glyoxalase 1.89
PF00924MS_channel 1.89
PF00069Pkinase 0.94
PF02178AT_hook 0.94
PF00717Peptidase_S24 0.94
PF12843QSregVF_b 0.94
PF04960Glutaminase 0.94
PF14907NTP_transf_5 0.94
PF14833NAD_binding_11 0.94
PF02423OCD_Mu_crystall 0.94
PF02775TPP_enzyme_C 0.94
PF00375SDF 0.94
PF01738DLH 0.94
PF01522Polysacc_deac_1 0.94
PF09084NMT1 0.94
PF07715Plug 0.94
PF01566Nramp 0.94
PF00528BPD_transp_1 0.94
PF13663DUF4148 0.94
PF07995GSDH 0.94
PF00296Bac_luciferase 0.94
PF10099RskA 0.94
PF00593TonB_dep_Rec 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG3797Uncharacterized conserved protein, DUF1697 familyFunction unknown [S] 4.72
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.77
COG1950Uncharacterized membrane protein YvlD, DUF360 familyFunction unknown [S] 3.77
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 3.77
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 1.89
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 1.89
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 1.89
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.94
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 0.94
COG1914Mn2+ or Fe2+ transporter, NRAMP familyInorganic ion transport and metabolism [P] 0.94
COG2066GlutaminaseAmino acid transport and metabolism [E] 0.94
COG2133Glucose/arabinose dehydrogenase, beta-propeller foldCarbohydrate transport and metabolism [G] 0.94
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.94
COG2423Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin familyAmino acid transport and metabolism [E] 0.94
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.94

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.51 %
UnclassifiedrootN/A8.49 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0776972All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae595Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0663804All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae592Open in IMG/M
3300000156|NODE_c0485587All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300000156|NODE_c0658071All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2422Open in IMG/M
3300000956|JGI10216J12902_103706826All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter1199Open in IMG/M
3300000956|JGI10216J12902_105916314All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter845Open in IMG/M
3300003324|soilH2_10231410All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1261Open in IMG/M
3300003792|Ga0055540_1008144All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae3820Open in IMG/M
3300004463|Ga0063356_100063683All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis3794Open in IMG/M
3300004463|Ga0063356_102802301All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae751Open in IMG/M
3300004463|Ga0063356_106312862All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae508Open in IMG/M
3300005295|Ga0065707_10321243All Organisms → cellular organisms → Bacteria → Proteobacteria966Open in IMG/M
3300005332|Ga0066388_103705432All Organisms → cellular organisms → Bacteria → Proteobacteria780Open in IMG/M
3300005365|Ga0070688_101133892All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter626Open in IMG/M
3300005366|Ga0070659_101491534All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp. OV174602Open in IMG/M
3300005511|Ga0077121_10046358All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis4645Open in IMG/M
3300005511|Ga0077121_10049571All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis4431Open in IMG/M
3300005515|Ga0077122_10181385All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1754Open in IMG/M
3300005560|Ga0066670_10552886All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300006038|Ga0075365_10255284All Organisms → cellular organisms → Bacteria1232Open in IMG/M
3300006038|Ga0075365_10844927All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. B156646Open in IMG/M
3300006169|Ga0082029_1284542All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter monticola522Open in IMG/M
3300006169|Ga0082029_1470475All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae5157Open in IMG/M
3300006169|Ga0082029_1807792All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae12578Open in IMG/M
3300006186|Ga0075369_10418466All Organisms → cellular organisms → Bacteria → Proteobacteria633Open in IMG/M
3300006845|Ga0075421_100328941All Organisms → cellular organisms → Bacteria → Proteobacteria1851Open in IMG/M
3300006846|Ga0075430_100120109All Organisms → cellular organisms → Bacteria → Proteobacteria2191Open in IMG/M
3300006894|Ga0079215_10949175All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_64_12624Open in IMG/M
3300007790|Ga0105679_10112458All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1945Open in IMG/M
3300009094|Ga0111539_10971046All Organisms → cellular organisms → Bacteria → Proteobacteria988Open in IMG/M
3300009148|Ga0105243_12813414All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae527Open in IMG/M
3300010037|Ga0126304_10535570All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales787Open in IMG/M
3300010397|Ga0134124_10971514All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium860Open in IMG/M
3300012212|Ga0150985_109543361Not Available668Open in IMG/M
3300012212|Ga0150985_112386273All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae827Open in IMG/M
3300012212|Ga0150985_115250337Not Available501Open in IMG/M
3300012212|Ga0150985_115343085All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales543Open in IMG/M
3300012212|Ga0150985_119446164All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1187Open in IMG/M
3300012469|Ga0150984_100910784All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter agri563Open in IMG/M
3300012469|Ga0150984_112765189Not Available553Open in IMG/M
3300012469|Ga0150984_112817925All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300012469|Ga0150984_115378154All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales991Open in IMG/M
3300012469|Ga0150984_116007519All Organisms → cellular organisms → Bacteria → Proteobacteria692Open in IMG/M
3300012469|Ga0150984_116521762All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales742Open in IMG/M
3300012469|Ga0150984_119371503All Organisms → cellular organisms → Bacteria → Proteobacteria517Open in IMG/M
3300012469|Ga0150984_121412666Not Available567Open in IMG/M
3300012985|Ga0164308_10922667All Organisms → cellular organisms → Bacteria → Proteobacteria771Open in IMG/M
3300012988|Ga0164306_10818231All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. B156752Open in IMG/M
3300012988|Ga0164306_10914683Not Available716Open in IMG/M
3300014326|Ga0157380_13530268All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae501Open in IMG/M
3300014497|Ga0182008_10071077All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1712Open in IMG/M
3300015201|Ga0173478_10827662Not Available511Open in IMG/M
3300015261|Ga0182006_1294365All Organisms → cellular organisms → Bacteria → Proteobacteria533Open in IMG/M
3300018465|Ga0190269_10011746All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3934Open in IMG/M
3300018465|Ga0190269_10114915All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1341Open in IMG/M
3300018481|Ga0190271_12649548All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300020156|Ga0196970_1028359All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1308Open in IMG/M
3300025273|Ga0209673_1016223All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae2795Open in IMG/M
3300025273|Ga0209673_1032431All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1609Open in IMG/M
3300025302|Ga0207426_1097575All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae765Open in IMG/M
3300025907|Ga0207645_10074774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia2169Open in IMG/M
3300025909|Ga0207705_10046999All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3103Open in IMG/M
3300025909|Ga0207705_10098538All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae2148Open in IMG/M
3300025909|Ga0207705_11253816All Organisms → cellular organisms → Bacteria → Proteobacteria567Open in IMG/M
3300025926|Ga0207659_10696129All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium870Open in IMG/M
3300025931|Ga0207644_11043075All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium687Open in IMG/M
3300025932|Ga0207690_11231880All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp. CG9_12625Open in IMG/M
3300026089|Ga0207648_12220602All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter monticola509Open in IMG/M
3300027880|Ga0209481_10132225All Organisms → cellular organisms → Bacteria → Proteobacteria1223Open in IMG/M
3300028587|Ga0247828_10036137All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter2058Open in IMG/M
3300028587|Ga0247828_10297806All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter888Open in IMG/M
3300028592|Ga0247822_10696579All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter821Open in IMG/M
3300028596|Ga0247821_10046073All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae2371Open in IMG/M
3300028596|Ga0247821_10180142All Organisms → cellular organisms → Bacteria → Proteobacteria1240Open in IMG/M
3300028596|Ga0247821_11213964All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300028608|Ga0247819_10095256All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter1483Open in IMG/M
3300028608|Ga0247819_10333988All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. B156858Open in IMG/M
3300031547|Ga0310887_11061314All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae519Open in IMG/M
3300031548|Ga0307408_100107820All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae2134Open in IMG/M
3300031548|Ga0307408_100253013All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1454Open in IMG/M
3300031548|Ga0307408_101181384All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus713Open in IMG/M
3300031548|Ga0307408_101630409Not Available613Open in IMG/M
3300031562|Ga0310886_10942534All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter551Open in IMG/M
3300031726|Ga0302321_101148221All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. B156889Open in IMG/M
3300031824|Ga0307413_11861886All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae540Open in IMG/M
(restricted) 3300031825|Ga0255338_1014652All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae4623Open in IMG/M
3300031858|Ga0310892_10565541All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter766Open in IMG/M
3300031938|Ga0308175_100126160All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax2411Open in IMG/M
3300031938|Ga0308175_101232588All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae832Open in IMG/M
3300031938|Ga0308175_101825877All Organisms → cellular organisms → Bacteria → Proteobacteria681Open in IMG/M
3300031938|Ga0308175_102598097All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter567Open in IMG/M
3300031939|Ga0308174_10250297All Organisms → cellular organisms → Bacteria1376Open in IMG/M
3300031939|Ga0308174_10333062All Organisms → cellular organisms → Bacteria → Proteobacteria1206Open in IMG/M
3300031939|Ga0308174_11003588All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter ginsenosidimutans708Open in IMG/M
3300031939|Ga0308174_11097072All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae677Open in IMG/M
3300031939|Ga0308174_11695348Not Available543Open in IMG/M
3300031995|Ga0307409_102808038All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae515Open in IMG/M
3300031996|Ga0308176_10550131All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1180Open in IMG/M
3300032012|Ga0310902_10265346All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1041Open in IMG/M
3300032012|Ga0310902_10548782All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter761Open in IMG/M
3300032074|Ga0308173_10273963All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1440Open in IMG/M
3300032074|Ga0308173_11126138All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae732Open in IMG/M
3300032144|Ga0315910_10326236All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300033004|Ga0335084_10190201Not Available2132Open in IMG/M
3300033550|Ga0247829_10916627All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae729Open in IMG/M
3300034384|Ga0372946_0172790All Organisms → cellular organisms → Bacteria1036Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil24.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.55%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere7.55%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere5.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.72%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere4.72%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.72%
Arabidopsis RootHost-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root3.77%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.77%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest2.83%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.83%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere2.83%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil1.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.89%
Sugar Cane Bagasse Incubating BioreactorEngineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor1.89%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.94%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.94%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.94%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.94%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.94%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.94%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.94%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000156Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobicEngineeredOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003792Arabidopsis rhizosphere microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2Host-AssociatedOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005511Combined assembly of arab plate scrape MF_Col (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005515Combined assembly of arab plate scrape MF_Cvi (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006186Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300020156Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_5-13CEnvironmentalOpen in IMG/M
3300025273Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025302Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031825 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T4_195EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_077697222228664021SoilMPDRLPTLDPEVKPPDYRVPRGRSGVGAESALETLMKDLERVRKAKEAWGELPDAIDSRQFRF
ICChiseqgaiiDRAFT_066380413300000033SoilMPDRLPTLDPEVXPPDFRVPRGRSGVGAESALETLMKDLERVRKAKEAWGELPDAIDSRQFRF*
NODE_048558723300000156Sugar Cane Bagasse Incubating BioreactorMPERIVYLDPEVKPPEYRVPRGRSGVGAQSALETLLKDLERIRRAREAYGDAPRANEHLQFRF*
NODE_065807123300000156Sugar Cane Bagasse Incubating BioreactorMSQSIPFLDPEVKPPDYRVPRGRSGQGSKSALETLLKDIDRVQRAKDAYGDLPKRPDGPFRF*
JGI10216J12902_10370682613300000956SoilMAGVVAFTMDPIPFLDPEVKPPEYRVPRGRSGVGAQSALEILLQDLERIRRAKEAYGEPPQRQETLQFRF*
JGI10216J12902_10591631423300000956SoilMQEPILFLDPEVKPPEFRVPRGRSGIGAQSALETLLSDLERIRKAKEAYAQLFQDIEQAVLRH*
soilH2_1023141033300003324Sugarcane Root And Bulk SoilMPQPIPYLDPEVKPPDYRVPRGRSGEGSKSALETLLKDIDRIQRAKEAWGDLPQRPEGGWRF*
Ga0055540_100814433300003792Arabidopsis RootMAQPIPFLDPEVKPPDYRVPRGRSGHGAKSALETLLKDLDRVRRAKEAYGDLPKRPDSSLRY*
Ga0063356_10006368363300004463Arabidopsis Thaliana RhizosphereMEPSLQPDPEVKPPDYRVPRGRSGAGASSAFLQLMKDLERVQRAKEYYGDLPPRKPAPPA
Ga0063356_10280230123300004463Arabidopsis Thaliana RhizosphereMQQPIPFLDPEVKPPDYRVPRGRSGQGSKSALETLLKDLDRVRRAKEAYGDLPKPPDSAFRLA*
Ga0063356_10631286213300004463Arabidopsis Thaliana RhizosphereMADAAIPWPWPDPEVRPPEYRVPRGRSGVGAQSALDTLLQDLERIRRAKEAYGELPLPGHVLQFRF*
Ga0065707_1032124323300005295Switchgrass RhizosphereMEERILILDPEVKPPEYRVPRGRSGVGASSALETLLSDLERIRKAREAYAQLFQGIEQAVTRH*
Ga0066388_10370543223300005332Tropical Forest SoilMACGARSGYHFVPTMAQPIPFLDPEVKPPDYRVPRGRSGHGSKSALETLLKDLDRVRRAKEAYGDLPKRPDSSLPY*
Ga0070688_10113389213300005365Switchgrass RhizosphereMEEPILFFDPEVKPPDYRVPRGRSGVGAQSALETLLSDLERIRKAREAYTQLFRGIEDAITRH*
Ga0070659_10149153413300005366Corn RhizosphereMSDVPYLDPEVKPPEYRIPRGRSGEGAHTALMTLLKDLERVRRAKEAYGDLPPRKPGPLLGA*
Ga0077121_1004635813300005511Arabidopsis RhizosphereMAQPIPFLDPEVKPPDYRVPRGRSGHGAKSALETLLKDLDRVRRAKEAYGDLPKR
Ga0077121_1004957153300005511Arabidopsis RhizosphereMSQPIPFLDPEVKPPDYRIPRGRSGHGSKSALETLLKDLDRVRRAKEAYGDLPKRPDSSLRY*
Ga0077122_1018138523300005515Arabidopsis RootMEPIAYLDPEVRPPEYRVPRGRSGVGAQSALETLLRDLERIRRAKEAYGDLARTQENSQFLF*
Ga0066670_1055288613300005560SoilEVKPPEYRVPRGRSGHGSRSALETLLRDLDRVQRAKEAYGDLPPRHDSPFRF*
Ga0075365_1025528433300006038Populus EndosphereMSQSIPFLDPEVKPPEYRVPRGRSGHGSKTALETWLKDIDRVQRAKEAYGDLPRRPGPAVPY*
Ga0075365_1084492723300006038Populus EndosphereMAAVNAMEPISYLDPEVRPPEYRVPRGRSGVGAQSALDTLLRDLERIRQAKEAYGDLPRRAEQWQFRF*
Ga0082029_128454223300006169Termite NestMEERILFLDPEVKPPHYRVPRGRSGVGAQSALETLLSDLERIRKAKEAYTELFQGIEQALTRH*
Ga0082029_147047573300006169Termite NestMQDHTAPLDPEVKPPHYRVPRGRSGVGAQSALETLLKDLERIRRAREAYGDLPQGPERLLYRF*
Ga0082029_1807792113300006169Termite NestMPDRIVYLDPEVKPPEYRVPRGRSGVGAKSALDTLIQDLERIRRAREAYGDLPRPAENWQFRF*
Ga0075369_1041846633300006186Populus EndosphereMSQSIPFLDPEVKPPEYRVPRGRSGHGSKTALETWLKDIDRVQRAKEAYGDLPRRPGPALPY*
Ga0075421_10032894123300006845Populus RhizosphereMVDRIPYLDPEVRPPEYRVPRGRSGVGAQSALETLLRDLERIRRAREAYGDLPRHPENLQFRF*
Ga0075430_10012010923300006846Populus RhizosphereMVDRIPYPDPEVRPPEYRVPRGRSGVGAQSALETLLRDLERIRRAREAYGDLPRHPENLQFRF*
Ga0079215_1094917513300006894Agricultural SoilELPAMPDRIAFLDPEVRPPEYRVPRGRSGIGSQSALETLLRDLERIRQAKEAYGDLPPRSEHLQLRF*
Ga0105679_1011245853300007790SoilMPDRIVHLDPEVKPPEYRVPRGRSGVGSQSALETLVQDLERIRRAREAYGDLPPLAEQQQFRF*
Ga0111539_1097104623300009094Populus RhizosphereMSQSIPFLDPEVKPPEYRVPRGRSGHGSKTALETWLKDIDRVQRAKEAYGDLPQRPGPALPY*
Ga0105243_1281341423300009148Miscanthus RhizosphereMPQPIPYLDPEVKPPDYRVPRGRSGHGSMSALETLLKDIDRVQRAKEAYGDVPTRPDPALPY*
Ga0126304_1053557023300010037Serpentine SoilMQPVPFRDAEVKPPEYRVPRGRSGVGAQSALEILLKDLERIRRAKEAYGEPADREMLQFRF*
Ga0134124_1097151423300010397Terrestrial SoilMQDRILFLDPEVKPPEYRVPRGRSGVGAQSALETLLSDLERIRKAKEAYRQLFQGIEQAVTRH*
Ga0150985_10954336113300012212Avena Fatua RhizosphereTMSQRIPYLDPEVKPPDYRVPRGRSGQGSRSALETLLKDIDRVQRAKEAYGDLPKRSDSPFRL*
Ga0150985_11238627323300012212Avena Fatua RhizosphereMVSASLTFALPSIAMEPLSYLDPEVRPPEYRVPRGRSGVGAQSALETLLNDLERIRRAKEAYGDDAPRRQEQQWQFRF*
Ga0150985_11525033713300012212Avena Fatua RhizosphereIPFLDPEVKPPDYRIPRGRSGHGSKSALETLLKDLDRVRRAKEAYGDLPKPPDSSFRLA*
Ga0150985_11534308523300012212Avena Fatua RhizosphereMSQRIPYLDPEVKPPEYRVPRGRSGHGSRSALETLLRDLDRVQRAKEAYGDLPPRRDSYRL*
Ga0150985_11944616423300012212Avena Fatua RhizosphereEPLSYLDPEVRPPEYRVPRGRSGVGAQSALETLLNDLERIRRAKEAYGDTQGRLEQWQFRF*
Ga0150984_10091078413300012469Avena Fatua RhizosphereMPQRIVYLDPEVKPPEYRVPRGRSGTGAQSALETLLHDMERIRRAKEAYGDLPRRSDELQFRF*
Ga0150984_11276518923300012469Avena Fatua RhizosphereAALATMAPTMSQRIPYLDPEVKPPDYRVPRGRSGEGSKSALETLLKDISRVQQAKQAYGDLPKRSEADSRF*
Ga0150984_11281792513300012469Avena Fatua RhizosphereMEPISYLDPEVRPPEYRVPRGRSGVGAQSALDTLLNDLERIRQAKEAYGDLPVRPEQWQFRF*
Ga0150984_11537815423300012469Avena Fatua RhizosphereMQESIAYRDPEVKPPEYRVPRGRSGVGAQSALETLLRDLERIRRAREAYGDTPRLSDQLQFRF*
Ga0150984_11600751913300012469Avena Fatua RhizosphereIPYLDPEVKPPDYRVPRGRSGNGSRSAFETLLKDIDRVQRAKEAYGDLPQRPDSALRF*
Ga0150984_11652176223300012469Avena Fatua RhizosphereMVSASLTFALPSIAMEPLSYLDPEVRPPEYRVPRGRSGVGAQSALDTLLNDLERIRRAKEAYGDTQGRLEQWQFRF*
Ga0150984_11937150313300012469Avena Fatua RhizospherePYLDPEVKPPEYRVPRGRSGHGSRSALETLLRDLDRVQRAKEAYGDLPPRQDSYRL*
Ga0150984_12141266623300012469Avena Fatua RhizospherePEVKPPDYRVPRGRSGHGSMSALETLLKDIDRVQRAKEAYGDLPKRSDSPFRL*
Ga0164308_1092266723300012985SoilMSQSIPFLDPEVKPPDYRVPRGRSGMGSKTALETWLKDIDRVQRAKEAYGDLPRRPDPALPY*
Ga0164306_1081823123300012988SoilMDAASVPFALPSIAMEPISYLDLEVRPPEYRVPRGRSGVGAQSALETLLNDLERIRRAKEAYGDLPSAQEKWQFRF*
Ga0164306_1091468313300012988SoilTMQPIPFLDPEVKPPDYRIPRGRSGHGSRSALETLLKDLDRVRRAKEAYGDLPKPPDSSFRLA*
Ga0157380_1353026813300014326Switchgrass RhizosphereMPQPIPYLDPEVKPPDYRVPRGRSGHGSMSALETLLKDIDRVQRAKEAYGDLPHRPDSPSFPY*
Ga0182008_1007107723300014497RhizosphereMSDVPYLDPEVKPPEYRIPRGRSGEGAHTALMTLLKDLERVRRAKEAYGDLPPREPGPLHGA*
Ga0173478_1082766223300015201SoilMSQSIPYLDPEVKPPDYRVPRGRSGHGSMSALETWLKDIDRVQRAKEAYGDLPRRPDPALPY*
Ga0182006_129436523300015261RhizosphereMSDVPYLDPEVKPPEYRIPRGRSGEGAHTSLMTLLKDLERVRRAKEAYGDLPPR
Ga0190269_1001174633300018465SoilMQDRILFLDPEVKPPEYRVPRGRSGVGAQSALDTLLSDLARIRKAKEAYAELFRGIEQALTRH
Ga0190269_1011491523300018465SoilMQERILFLDPEVKPPNFRVPRGRSGVGAQSALETLLSDLERIRKAKEAYAELFQGIEHAVVARH
Ga0190271_1264954823300018481SoilPEVKPPEYRVPRGRSGIGANSALETLMQDLERIRRAKEAYGDQKPLYESTQFRF
Ga0196970_102835933300020156SoilMPDRTACLDPEVKPPDYRVPRGRSGVGAQTALDTLLRDLERVRLAREAYGDLPAASEQQQFRF
Ga0209673_101622333300025273Arabidopsis RootMAQPIPFLDPEVKPPDYRVPRGRSGHGAKSALETLLKDLDRVRRAKEAYGDLPKRPDSSLRY
Ga0209673_103243143300025273Arabidopsis RootMSQPIPFLDPEVKPPDYRIPRGRSGHGSKSALETLLKDLDRVRRAKEAYGDLPKRPDSSLRY
Ga0207426_109757523300025302Arabidopsis RhizosphereMEPIAYLDPEVRPPEYRVPRGRSGVGAQSALETLLRDLERIRRAKEAYGDLARTQENSQFLF
Ga0207645_1007477413300025907Miscanthus RhizosphereLDPEVKPPEYRVPRGRSGVGASSALETLLSDLERIRKAREAYAQLFQGIEQAVTRH
Ga0207705_1004699913300025909Corn RhizosphereDPDVKPPDYRVPRGRSGIGSKSALETLLKDIDRVQRAKEAYGDLPRQPGAGWRR
Ga0207705_1009853843300025909Corn RhizosphereVKPPEYRVPRGRSGVGAQSALDTLLKDLERIRLARQAYGDLPRNVEGLQLRF
Ga0207705_1125381613300025909Corn RhizospherePDQILYPDPEVKPPEYRVPRGRSGVGSQSALDTLVKDLERIRLAKQAYGDLPRGVEGMQFRF
Ga0207659_1069612913300025926Miscanthus RhizosphereMAGVAPFAMDPIPFLDPEVKPPEYRVPRGRSGVGAQSALDILLQDLERIRRAKEAYGEPPQRPEMLQFRF
Ga0207644_1104307523300025931Switchgrass RhizosphereSCDKATAMEQPILYLDPEVKPPDFRVPRGRSGVGAQSALETLMADLERVRKAREAYLQLFQTIEQAVMRH
Ga0207690_1123188023300025932Corn RhizosphereMSDVPYLDPEVKPPEYRIPRGRSGEGAHTALMTLLKDLERVRRAKEAYGDLPPRKPGPLLGA
Ga0207648_1222060223300026089Miscanthus RhizosphereAHTVMEERILILDPEVKPPEYRVPRGRSGVGASSALETLLSDLERIRKAREAYAQLFQGIEQAVTRH
Ga0209481_1013222523300027880Populus RhizosphereMVDRIPYLDPEVRPPEYRVPRGRSGVGAQSALETLLRDLERIRRAREAYGDLPRHPENLQFRF
Ga0247828_1003613733300028587SoilMVDRIPFLDPEVRPPEYRVPRGRSGVGAQSALETLLRDLERIRRAREAYGELPRQPENLQFRF
Ga0247828_1029780633300028587SoilMAGVAAFAMDPIPFLDPEVKPPEYRVPRGRSGVGAQSALEILLQDLERIRRAKEAYGELPQRLGALRQ
Ga0247822_1069657913300028592SoilMEERILILDPEVKPPEYRVPRGRSGVGASSALETLLSDLERIRKAREAYAQLFQGIEQAV
Ga0247821_1004607333300028596SoilMAGVAAFAMDPIPFLDPEVKPPEYRVPRGRSGVGAQSALEILLQDLERIRRAKEAYGELPQRSETLQFRF
Ga0247821_1018014233300028596SoilMEERILILDPEVKPPEYRVPRGRSGVGASSALETLLSDLERIRKAREAYAQLFQGIEQAVTRH
Ga0247821_1121396423300028596SoilVASHENFGYHSQRCAMANRFEVPDPEVRPPEYRVPRGRSGVGSETALETLLSDLERIRRAKESWGEPAERPESWQFRF
Ga0247819_1009525623300028608SoilMEEPILILDPEVKPPEYRVPRGRSGVGASSALETLLSDLERIRKAREAYAQLFKGIEQAVTRH
Ga0247819_1033398833300028608SoilMANRIPYFDPEVKPPDYRVPRGRSGQGSKSALETLLKDIDRVRRAKEAWGDLPPRQDSQVRY
Ga0310887_1106131423300031547SoilMPQPIPYLDPEVKPPDYRVPRGRSGHGSMSALETLLKDIDRVQRAKEAYGDLPHRPDSPSFPY
Ga0307408_10010782023300031548RhizosphereMPDRIVCLDPEVKPPEYRVPRGRSGMGATSALETLLQDLERIRRAREAYGDLPPHAGQQQFRF
Ga0307408_10025301323300031548RhizosphereMPDRIVYLDPEVKPPEYRVPRGRSGHGSKSALETLLQDLERVRRAKEAYGDVPRSADLPQYRF
Ga0307408_10118138423300031548RhizosphereMADRIPYLDAEVKPPEYRVPRGRSGVGAQSALETLLRDLERIRRAKEAYGDLPRQPEHWQFRF
Ga0307408_10163040913300031548RhizosphereMPDRIVYLDPEVKPPEYRVPRGRSGTGATSALETLLQDLERIRRAREAYGDLPPHAGQQQFRF
Ga0310886_1094253413300031562SoilMAGVVAFTMDPIPFLDPEVKPPEYRVPRGRSGVGAQSALEILLQDLERIRRAKEAYGEPPQRQETLQFRF
Ga0302321_10114822123300031726FenMAAAKVMEPISYLDPEVRPPEYRVPRGRSGVGAQSALETLMRDLERIRQAKEAYGDQPKRPDQWQFRF
Ga0307413_1186188623300031824RhizosphereMQKRIEYLDPEVRPPEYRVPRGRSGVGAETALETLLSDLERIRRAKEAYGEPSERPESWQFRF
(restricted) Ga0255338_101465233300031825Sandy SoilMQDRIVFLDPEVKPPEYRVPRGRSGVGARSALETLLSDLERIRKAREGYAQLFQGIEQAVHRH
Ga0310892_1056554123300031858SoilMDPIPFLDPEVKPPEYRVPRGRSGVGAQSALEILLQDLERIRRAKEAYGEPPQRQEMLQFRF
Ga0308175_10012616023300031938SoilMPDRIPAPDPEVKPPEYRVPRGRSGIGAQSALDTLVKDLERIRLARQAWGDLPRSGSEAVQFRF
Ga0308175_10123258823300031938SoilMPDRILFADPEVKPPEYRVPRGRSGVGAQSALETLVKDLERIRLARQAYGDLPRQFEALQLRF
Ga0308175_10182587723300031938SoilMPDRILFPDPEVKPPEYRVPRGRSGVGAQSALDTLLKDLERIRLAKQAYGDLPRQFEGLQLRF
Ga0308175_10259809723300031938SoilMAGVVVTAMQTVPFRDPEVKPPEYRVPRGRSGIGAQSALEILLKDLERIRRAKEAYGEPAERETFQFRF
Ga0308174_1025029723300031939SoilMQEPILYLDPEVKPPYYRVPRGRSGVGAQSALETLLNDLERIRKAKEAYRQLFQGIEEAVTRH
Ga0308174_1033306243300031939SoilMAQRIPYLDPEVKPPDYRVPRGRSGHGAREALETLLRDLDRVQRAKEAWGDL
Ga0308174_1100358813300031939SoilMPDRIPFLDPEVKPPEYRVPRGRSGVGAQSALDTLAKDLERIRLARQAYGDLPHSFETLQLRF
Ga0308174_1109707223300031939SoilMPNPILIADPQVKPPEYRVPRGRSGVGSQSALDTLLKDLERIRLAKQAYGDLPRSFEGLQLRF
Ga0308174_1169534823300031939SoilMVSCEWLPLPVTMQPIPFLDPEVKPPDYRIPRGRSGHGSKSALETLLKDLDRVRRAKEAYGDLPKPPDSSFRLA
Ga0307409_10280803823300031995RhizosphereMANRIPYLDPEVKPPEYRVPRGRSGVGAKSALETLLHDLERIRRAREAHGDLPPRADELQLRF
Ga0308176_1055013123300031996SoilMVSCEWLPLPVTMQPIPFLDPEVKPPDYRIPRGRSGHGSMSALETLLKDLDRVRRAKEAYGDLPKPPDSSFRLA
Ga0310902_1026534613300032012SoilHPRSSVAMEEPILFFDPEVKPPDYRVPRGRSGVGAQSALETLLSDLERIRKAREAYTQLFRGIEDAITRH
Ga0310902_1054878223300032012SoilMVGVFAFSMDPIPFLDPEVKPPEYRVPRGRSGVGAQSALEILLQDLERIRRAKEAYGEPPQRQETLQFRF
Ga0308173_1027396333300032074SoilMPNRTLIADPEVKPPEYRVPRGRSGVGSQSALDTLLKDLERIRLAKQAYGDLPRSFEGLQLRF
Ga0308173_1112613813300032074SoilMAQRIPYLDPEVKPPDYRVPRGRSGHGAREALETLLRDLDRVQRAKEAWGDLPPRQDSPSRF
Ga0315910_1032623633300032144SoilMPQPIPYLDPEVKPPDYRVPRGRSGQGSMSALETLLKDIDRIQRAKAAYGDLPQRPDSPAFPY
Ga0335084_1019020123300033004SoilMNQAVHPLDPEVKPPEYRVPRGRSGVGAQSALETLLKDLERIRRAREAYGDAPRRAEPWFRF
Ga0247829_1091662723300033550SoilMAGVIAFAMDPIPFLDPEVKPPEYRVPRGRSGVGAQSALEILLQDLERIRRAKEAYGEPPRRQETLQFRF
Ga0372946_0172790_307_4983300034384SoilMPHRITFLDPEVKPPEYRVPRGRSGVGSDSALETLLHDLERIRRAKEAYGDLPERPDHLQFRF

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