Metagenome / Metatranscriptome Family F092942

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092942
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	57 residues
Representative Sequence	MDEQDVRERAEALCAALVAGDIERVTEDFSKELRQNLGEVLALLPLPSNEATVDS
Number of Associated Samples	88
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.20 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	86.92 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.505 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (29.907 % of family members)
Environment Ontology (ENVO)	Unclassified (25.234 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.766 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.96% β-sheet: 0.00% Coil/Unstructured: 59.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01494	FAD_binding_3	8.41
PF04075	F420H2_quin_red	6.54
PF01326	PPDK_N	3.74
PF02653	BPD_transp_2	3.74
PF00596	Aldolase_II	2.80
PF01451	LMWPc	2.80
PF04030	ALO	1.87
PF00903	Glyoxalase	1.87
PF04952	AstE_AspA	1.87
PF13365	Trypsin_2	1.87
PF13662	Toprim_4	0.93
PF01979	Amidohydro_1	0.93
PF12680	SnoaL_2	0.93
PF05977	MFS_3	0.93
PF00892	EamA	0.93
PF00156	Pribosyltran	0.93
PF01243	Putative_PNPOx	0.93
PF08837	DUF1810	0.93
PF00486	Trans_reg_C	0.93
PF01048	PNP_UDP_1	0.93
PF00005	ABC_tran	0.93
PF08275	Toprim_N	0.93
PF01807	zf-CHC2	0.93
PF01695	IstB_IS21	0.93
PF13649	Methyltransf_25	0.93
PF00291	PALP	0.93
PF03988	DUF347	0.93
PF01047	MarR	0.93
PF01865	PhoU_div	0.93
PF10604	Polyketide_cyc2	0.93
PF01545	Cation_efflux	0.93
PF12867	DinB_2	0.93
PF00089	Trypsin	0.93
PF06803	DUF1232	0.93
PF03466	LysR_substrate	0.93
PF13540	RCC1_2	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	16.82
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	8.41
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	8.41
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	8.41
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	3.74
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.87
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	1.87
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.93
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.93
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.93
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.93
COG1392	Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family	Inorganic ion transport and metabolism [P]	0.93
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.93
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.93
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.93
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	0.93
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.93
COG4705	Uncharacterized membrane-anchored protein	Function unknown [S]	0.93
COG5579	Uncharacterized conserved protein, DUF1810 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.50 %
Unclassified	root	N/A	21.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.50 %
Unclassified	root	N/A	21.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.50 %
Unclassified	root	N/A	21.50 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.40 %
Unclassified	root	N/A	21.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	35.51 %
Unclassified	root	N/A	21.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10.28 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.87 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.93 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	32.71 %
Unclassified	root	N/A	21.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.54 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.87 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.93 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.93 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	32.71 %
Unclassified	root	N/A	21.50 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.87 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.87 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.93 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.93 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.93 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.93 %
Thermoanaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	32.71 %
Unclassified	root	N/A	21.50 %
Desulfocapsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae	1.87 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.87 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.93 %
Thermoanaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.93 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	32.71 %
Unclassified	root	N/A	21.50 %
Desulfopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfopila	1.87 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.93 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.93 %
Thermanaeromonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermanaeromonas	0.93 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	32.71 %
Unclassified	root	N/A	21.50 %
Desulfopila aestuarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfopila → Desulfopila aestuarii	1.87 %
unclassified Amycolatopsis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis	0.93 %
Thermanaeromonas toyohensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermanaeromonas → Thermanaeromonas toyohensis	0.93 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.93 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	32.71 %
Unclassified	root	N/A	21.50 %
Desulfopila aestuarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfopila → Desulfopila aestuarii	1.87 %
Amycolatopsis sp. ATCC 39116	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. ATCC 39116	0.93 %
Thermanaeromonas toyohensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermanaeromonas → Thermanaeromonas toyohensis	0.93 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.93 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918024\|NODE_303720_length_5489_cov_18.965931	All Organisms → cellular organisms → Bacteria	5539	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104565842	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300001361\|A30PFW6_1432307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	548	Open in IMG/M
3300001402\|JGI20195J14853_1005994	Not Available	3411	Open in IMG/M
3300001537\|A2065W1_10537507	All Organisms → cellular organisms → Bacteria → Terrabacteria group	578	Open in IMG/M
3300001538\|A10PFW1_10707347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300001870\|JGI24129J20441_1065930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	735	Open in IMG/M
3300002068\|JGIcombinedJ21913_10004041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermanaeromonas → Thermanaeromonas toyohensis	7062	Open in IMG/M
3300002071\|JGIcombinedJ21915_10118760	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300002071\|JGIcombinedJ21915_10284049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	564	Open in IMG/M
3300002071\|JGIcombinedJ21915_10296955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	547	Open in IMG/M
3300002347\|JGIcombinedJ26865_1060825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300002515\|JGI24144J35610_10000443	All Organisms → cellular organisms → Bacteria	13180	Open in IMG/M
3300002515\|JGI24144J35610_10075459	All Organisms → cellular organisms → Bacteria → Proteobacteria	815	Open in IMG/M
3300002550\|JGI24131J36419_10098432	Not Available	728	Open in IMG/M
3300002563\|JGI24138J36424_10059402	Not Available	1013	Open in IMG/M
3300002564\|JGI24134J36421_10122176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	599	Open in IMG/M
3300004643\|Ga0062591_102169973	Not Available	577	Open in IMG/M
3300005180\|Ga0066685_10065693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2367	Open in IMG/M
3300005557\|Ga0066704_10334557	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300005938\|Ga0066795_10244225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	532	Open in IMG/M
3300006046\|Ga0066652_100116947	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2181	Open in IMG/M
3300006605\|Ga0074057_11973269	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300006796\|Ga0066665_10291621	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300006864\|Ga0066797_1194655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. ATCC 39116	708	Open in IMG/M
3300006864\|Ga0066797_1271161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	592	Open in IMG/M
3300006864\|Ga0066797_1327639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	535	Open in IMG/M
3300006949\|Ga0075528_10033015	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300006950\|Ga0075524_10028590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2233	Open in IMG/M
3300006950\|Ga0075524_10242457	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300009012\|Ga0066710_101156340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1198	Open in IMG/M
3300009156\|Ga0111538_13117584	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300010337\|Ga0134062_10371675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	693	Open in IMG/M
3300011106\|Ga0151489_1518393	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300011200\|Ga0137471_102585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	959	Open in IMG/M
3300012005\|Ga0120161_1067842	Not Available	938	Open in IMG/M
3300012045\|Ga0136623_10002132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7102	Open in IMG/M
3300012187\|Ga0136622_10222591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	794	Open in IMG/M
3300012680\|Ga0136612_10021864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3191	Open in IMG/M
3300012685\|Ga0137397_11353715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	503	Open in IMG/M
3300012913\|Ga0157298_10302421	Not Available	568	Open in IMG/M
3300012914\|Ga0157297_10532341	Not Available	501	Open in IMG/M
3300012941\|Ga0162652_100095381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300012960\|Ga0164301_10575426	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300012984\|Ga0164309_11154961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	647	Open in IMG/M
3300012985\|Ga0164308_11570974	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012988\|Ga0164306_11043462	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300013104\|Ga0157370_11394036	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300013296\|Ga0157374_12282195	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300013296\|Ga0157374_12300151	Not Available	566	Open in IMG/M
3300013306\|Ga0163162_10741772	Not Available	1102	Open in IMG/M
3300013758\|Ga0120147_1089906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300013772\|Ga0120158_10493783	Not Available	540	Open in IMG/M
3300015165\|Ga0167628_1076209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	629	Open in IMG/M
3300015199\|Ga0167647_1088951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	789	Open in IMG/M
3300017787\|Ga0183260_10219042	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1326	Open in IMG/M
3300017787\|Ga0183260_10786672	Not Available	597	Open in IMG/M
3300017789\|Ga0136617_11151648	Not Available	584	Open in IMG/M
3300018054\|Ga0184621_10342652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300018469\|Ga0190270_11414618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	742	Open in IMG/M
3300018469\|Ga0190270_13202834	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300018476\|Ga0190274_10927280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	940	Open in IMG/M
3300018476\|Ga0190274_11269284	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300018476\|Ga0190274_13891099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300018482\|Ga0066669_10729995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	873	Open in IMG/M
3300019876\|Ga0193703_1059388	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300021080\|Ga0210382_10387090	Not Available	618	Open in IMG/M
3300021080\|Ga0210382_10434992	Not Available	581	Open in IMG/M
3300021080\|Ga0210382_10521257	Not Available	526	Open in IMG/M
3300021363\|Ga0193699_10176345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	884	Open in IMG/M
3300024055\|Ga0247794_10172078	Not Available	687	Open in IMG/M
3300025481\|Ga0208079_1082592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	629	Open in IMG/M
3300025484\|Ga0208587_1000747	All Organisms → cellular organisms → Bacteria	17862	Open in IMG/M
3300025495\|Ga0207932_1042943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1058	Open in IMG/M
3300025499\|Ga0207931_1000638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfopila → Desulfopila aestuarii	12723	Open in IMG/M
3300025692\|Ga0209744_1133508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	818	Open in IMG/M
3300025718\|Ga0209123_1212078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	629	Open in IMG/M
3300025836\|Ga0209748_1007291	All Organisms → cellular organisms → Bacteria	5135	Open in IMG/M
3300025846\|Ga0209538_1252648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	637	Open in IMG/M
3300025852\|Ga0209124_10001166	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfopila → Desulfopila aestuarii	11001	Open in IMG/M
3300025852\|Ga0209124_10081884	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300025865\|Ga0209226_10088289	Not Available	1414	Open in IMG/M
3300025865\|Ga0209226_10133751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1117	Open in IMG/M
3300025865\|Ga0209226_10281286	Not Available	705	Open in IMG/M
3300025878\|Ga0209584_10094579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1098	Open in IMG/M
3300025878\|Ga0209584_10310232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	607	Open in IMG/M
3300025888\|Ga0209540_10265573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	989	Open in IMG/M
3300025888\|Ga0209540_10462455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	676	Open in IMG/M
3300026343\|Ga0209159_1112658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1163	Open in IMG/M
3300026523\|Ga0209808_1305075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300026530\|Ga0209807_1354704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300026540\|Ga0209376_1072120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1873	Open in IMG/M
3300028420\|Ga0210366_10206082	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	750	Open in IMG/M
3300028711\|Ga0307293_10033683	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300028799\|Ga0307284_10366234	All Organisms → cellular organisms → Bacteria → Terrabacteria group	584	Open in IMG/M
3300028802\|Ga0307503_10697222	Not Available	570	Open in IMG/M
3300028811\|Ga0307292_10046619	Not Available	1611	Open in IMG/M
3300028885\|Ga0307304_10458095	Not Available	581	Open in IMG/M
3300029990\|Ga0311336_11365645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	621	Open in IMG/M
3300030006\|Ga0299907_10336006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1226	Open in IMG/M
3300031229\|Ga0299913_10187468	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300031229\|Ga0299913_12073928	Not Available	514	Open in IMG/M
3300031669\|Ga0307375_10821472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300031726\|Ga0302321_100889525	Not Available	1009	Open in IMG/M
3300032456\|Ga0335394_10595640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	864	Open in IMG/M
3300033811\|Ga0364924_008113	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1904	Open in IMG/M
3300034114\|Ga0364938_012886	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1192	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.33%
Host-Associated	Host-Associated	4.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.11%
Aquatic	Environmental → Aquatic	11.21%
Plants	Host-Associated → Plants	4.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.44%
Freshwater	Environmental → Aquatic → Freshwater	9.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.74%
Peat	Environmental → Terrestrial → Peat	1.87%
Floodplain	Environmental → Terrestrial → Floodplain	1.87%
Marine	Environmental → Aquatic → Marine	0.93%
Sediment	Environmental → Aquatic → Sediment	0.93%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.77%
Ice	Environmental → Aquatic → Freshwater → Ice	6.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Clay	Environmental → Terrestrial → Soil → Clay	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	36.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.28%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	5.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.87%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.93%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	29.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.41%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	5.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	5.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.80%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.87%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.93%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918024	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001402	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001870	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211	Environmental	Open in IMG/M
3300002068	Barrow Graham LP Ref core NGADG0004-212 (Barrow Graham LP Ref core NGADG0004-212,NGADG0011-311, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002071	Barrow Graham LP Ref core NGADG0011-312 (Barrow Graham LP Ref core NGADG0011-312,NGADG0011-212, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300002515	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A	Environmental	Open in IMG/M
3300002550	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211	Environmental	Open in IMG/M
3300002563	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312	Environmental	Open in IMG/M
3300002564	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011200	Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 6 - S13.3.30.a - transect 3, age 5 years, surface depth)	Environmental	Open in IMG/M
3300012005	Permafrost microbial communities from Nunavut, Canada - A15_80cm_0M	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300015165	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3A, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025499	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025718	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-31A (SPAdes)	Environmental	Open in IMG/M
3300025836	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)	Environmental	Open in IMG/M
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300028420	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.641 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300032456	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (spades assembly)	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300034114	Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B_all_v_00722120	2140918024	Soil	MDEQDVRERAEALCAALVAGDIERVTEDFSKELRQNLGEVLALLPLPS
INPhiseqgaiiFebDRAFT_1045658421	3300000364	Soil	MDEEDVRERAGAFCEAIVAGNIDRAIEDLSKELRQNLGEVLTLFPIPAQEAS
A30PFW6_14323071	3300001361	Permafrost	MQEVDVREHAEALCGALVAGDVGRAIEEFSKELRGNLGEVLVLLPLPATEATIESIDGGGSGFVVVLRLVGETEEVQI
JGI20195J14853_10059941	3300001402	Arctic Peat Soil	MEEHDVRERAEALCVALVAGDIGRATEDFSKELREHLGEVLALLPLPSSEATVESIDRGGGSGY
A2065W1_105375071	3300001537	Permafrost	MDEPAVRKHAQAFCDKLVAGDVDRAIEDFSKELRQHVGEVLALLPLPANEGTVESVAQGGSG
A10PFW1_107073472	3300001538	Permafrost	MEEQLVRERAEALCAALVAGDVEXXXXXXXXTEDFSKELRQNLGEVLVLLPLPSTEATIESIDAGGSGFIVVLRLVGETDEVLI
JGI24129J20441_10659301	3300001870	Arctic Peat Soil	MEEQDVREHAEALCAALVAGDIERVTEDFSKELRQNLGEVLALLPLPSNEATVDSIDR
JGIcombinedJ21913_100040416	3300002068	Arctic Peat Soil	MEEHDVRERAEALCAALVAGDIERVTEDFSKELRQHLGEVLALLPLPSSEATVESIDR
JGIcombinedJ21915_101187603	3300002071	Arctic Peat Soil	MDEQDVRDRAEALCAAAVAGDIDRVIEDFSPELRHNL
JGIcombinedJ21915_102840491	3300002071	Arctic Peat Soil	MEEQDVRERAEALCEALLAGDIGRATEDFSKELRQNLGEVLALLPLPSSEATVESIDRGGGSGYTVVLRLVGETEEV
JGIcombinedJ21915_102969551	3300002071	Arctic Peat Soil	MEEQDVRERAEALCAAVVAGDIDRVTEDFSKELRHNLGEVLALLPLPSNGATVESVDRGGGSGYT
JGIcombinedJ26865_10608252	3300002347	Arctic Peat Soil	MDEQDVRERAEALCAALVAGDIERVTEDFSKELRQNLGEVLALLPLPSNEATVDSIDRGGGSGYTVVLRLVGE
JGI24144J35610_100004431	3300002515	Arctic Peat Soil	MEEHDVRERAEALCVALVAGDIGRATEDFSKELRQHLGEVLALLPLPSSEATVESIDRGGGSGYTVVL
JGI24144J35610_100754591	3300002515	Arctic Peat Soil	MDEQDVRERAEALCAALVAGDIERVTEDFSKELRQNLGEVLALLPLPSNEATVDSIDR
JGI24131J36419_100984321	3300002550	Arctic Peat Soil	MEEHDVRERAEALCVALVAGDIGRATEDFSKELREHLGEVLALLPLPSSEATVESIDRGGGSGYTVVL
JGI24138J36424_100594021	3300002563	Arctic Peat Soil	MEEQDVRERAEALCAAVVAGDIDRVTEDFSKELRHNLGEVLALLPLPSNGATVESVDRGGGSGYTVVL
JGI24134J36421_101221761	3300002564	Arctic Peat Soil	MEEHDVRERAEALCVALVAGDIGRATEDFSKELRQHLGEVLALLPLPSSEATVESIDRGGGSGYTVVLRLVGETEEVL
Ga0062591_1021699731	3300004643	Soil	MEEPQVRERAEAMCAALVTGDVGQATEAFSKELRQNLGEVVALLPLP
Ga0066685_100656931	3300005180	Soil	MDEPALRERAAALCDALVAGDIDRATEDFSKELRQNLGTVLALLPL
Ga0066704_103345571	3300005557	Soil	MDEPALRERAAALCDALVAGDIDRATEDFSKELRQNLGTVLALLPLPSHEATVESVEHGGSGYNIMIRLVGETEEVLIQT
Ga0066795_102442252	3300005938	Soil	MEEQDVREHAEALCAALVAGDIERVTEDFSKELRQNLGEV
Ga0066652_1001169472	3300006046	Soil	MEEPAVRERAEAFCAALVVGDIGLATEHFSQELKRNMGEVVALLPLPAVAATVDTIERAGSGFAVVLRVTG
Ga0074057_119732692	3300006605	Soil	MEEPQVRERAEAMCAALVAGDVGKATEAFSKELRQNLGEVVALLPLPA
Ga0066665_102916214	3300006796	Soil	MDEPALRERAAALCDALVAGDIDRATEDFSKELRQNLGTVLALLPLPSHEATVESVEH
Ga0066797_11946551	3300006864	Soil	MEEQDVREHAEALCAALVAGDIERVTEDFSKELRQNLGEVLALLPLPSNEATVDSIDRGGGSGYTVVLRLVGETDEVLIQTRW
Ga0066797_12711612	3300006864	Soil	MDEQDVRERAEALCAAAVAGDIDRVIEDFSPELRHNLGEVLALLPLPSDSATIDRIERGGGSGYTVVLR
Ga0066797_13276391	3300006864	Soil	MEEQNVRERAEALCAALVAGDIDRVIEDFSKELRQNLGEVLALLPLPSNEAT
Ga0075528_100330151	3300006949	Arctic Peat Soil	LIRTFEGQPMEEHDVRERAEALCVALVAGDIGRATEDFSKELREHLGEVLALLPLPS
Ga0075524_100285901	3300006950	Arctic Peat Soil	MEEHDVRERAEALCAALVAGDIERVTEDFSKELRQHLGEV
Ga0075524_102424571	3300006950	Arctic Peat Soil	MDEQDVRERAEALCAALVAGDIERVTEDFSKELRQ
Ga0066710_1011563404	3300009012	Grasslands Soil	MDEPALRERAAALCDALVAGDIDRATEDFSKELRQNLGTV
Ga0111538_131175841	3300009156	Populus Rhizosphere	MDEQAVRDHALALCDALVAGDIGAATQDFSAELRHNLGEVVALLPLPATEAT
Ga0134062_103716752	3300010337	Grasslands Soil	MDEPALRERAAALCDALVAGDIDRATEDFSKELRQNLGTVLALLPLPSHEATVESVEHGGSGYNI
Ga0151489_15183931	3300011106	Soil	MMEEAQVRERAEAMCAALVAGDVGKATEDFSKELRQNLGEVVA
Ga0137471_1025852	3300011200	Glacier Forefield Soil	MEEQHVRDRAEVLCAALVTGDIELATQDFSKELRQNLGEVLALLPLPLSEA
Ga0120161_10678421	3300012005	Permafrost	MDEQAVRERAQAVCDALVAGDIKLATEDFSNELRQNLGEVLGLLPLPSNEATVDSVDHGGSGYKVVIRVVGG
Ga0136623_1000213211	3300012045	Polar Desert Sand	MDEDTIRERAQALCDALVAGDIDLATSDFSPELRKHLGEVIALLP
Ga0136622_102225911	3300012187	Polar Desert Sand	MDEPTVREHAQTLCDALVAGNVELAIADFSKELRQNLGEVVSLLPLPSI
Ga0136612_100218641	3300012680	Polar Desert Sand	MEEPIVREHAEAFCAALVAGDIERAIEELSPELRQNLGEVLALLP
Ga0137397_113537151	3300012685	Vadose Zone Soil	MDEEVIRQHASALGDALVAGDIDLATQDFSPELRKHLGEVLGLLPLP
Ga0157298_103024211	3300012913	Soil	MMEEPQVRERAEAMCAALVAGDVGKATEAFSKELRQNLGEVVALLPLP
Ga0157297_105323411	3300012914	Soil	MMEEAQVRERADALCAALVVGDVGKATEDFSKELRQNLG
Ga0162652_1000953812	3300012941	Soil	MDETQVRERAEAVCAALVAGDVGKATEDFSKELRQNLGEVVA
Ga0164301_105754262	3300012960	Soil	MEEPQVRERAEAMCAALVAGDVGQATEDFSKELRQNLGEVVALLPLPA
Ga0164309_111549612	3300012984	Soil	MEDQPMDEEAVRARAQALCEAIVAGDIDRAIEDFSTELRQHLGEVIALLPLPATEATIESIEHSGSGDNVVLRL
Ga0164308_115709741	3300012985	Soil	MEEPQVRERAEAMCAALVAGDVGKATEVFSKELRQNLGEVVALLPLPATEGTVDS
Ga0164306_110434622	3300012988	Soil	MEEPQVRERAEAMCAALVAGDVGQATEDFSKELRQNLGEVVALLPLPATEATVDSIERGSSGFVVVLRLVG
Ga0157370_113940362	3300013104	Corn Rhizosphere	MEEPQVRERAEAMCAALVAGDVGTATEDFSKELRQNLGEVVALLPLPATEATI
Ga0157374_122821951	3300013296	Miscanthus Rhizosphere	MEEPQVRERAEAMCAALVAGDVGTATEDFSKELRQNLGEVVAL
Ga0157374_123001511	3300013296	Miscanthus Rhizosphere	MDEQAVRDRALTLCDALVAGDIGAATQDFSAELRHNLGEVVALLPLPATEATADSVARSPSGFTVVIRIIGDAQ
Ga0163162_107417722	3300013306	Switchgrass Rhizosphere	MDEQDVRDRAEAVCAALVAGDVDGAIGAFSEELRRNL
Ga0120147_10899062	3300013758	Permafrost	MDEPAVRKHAQAFCDKLVAGDVDRAIEDFSKELRQHVGEVLALLPLPANEGTVESVAQGGSGYTVVIRLAGEI
Ga0120158_104937831	3300013772	Permafrost	MEELDVRNRTEAVCAALVQGDMGGATTDFSNELRQHLGEVLALLPLPLSEATIE
Ga0167628_10762092	3300015165	Glacier Forefield Soil	MEDQDVRERAEALCAALVAGDIERATEDFSKELRQNLGEVLVLLPLPAVAGTIESV
Ga0167647_10889511	3300015199	Glacier Forefield Soil	MEEQDVRARAEALCAALVSGDIEQATADFSAELRHNLGEVIALMPLPATAASVASVERGGSSAFVAILELVGET
Ga0183260_102190422	3300017787	Polar Desert Sand	MEEQDVRAHAEALCAGLVAGDIERATTDFSKELRQNLGEVLALL
Ga0183260_107866722	3300017787	Polar Desert Sand	VDEQAVRKHAEAYCAALVAGDVERAAEDLSSELRSNLG
Ga0136617_111516482	3300017789	Polar Desert Sand	MDEQLLRERAEALCAALLAGDIERATVDLSDALRANLGAFVVLLPLPLTE
Ga0184621_103426521	3300018054	Groundwater Sediment	MDDEAVREHAQALCDALVAGDIDRATTDFSQELRKHLGEVLSLLPLPSTEATVESVDRGGSAHVVVLRLV
Ga0190270_114146181	3300018469	Soil	MEESDVRERAEAMCAALVDGDIARATEDFSRELQQHLGEV
Ga0190270_132028342	3300018469	Soil	MDETQVRERAEAVCEALVAGDVGKATEDFSKELRQNLGEVVALLPLPATEGTVESIDRGGGSSFTVV
Ga0190274_109272801	3300018476	Soil	MDEAAVRERAGALCDKLVAGDIDGAIEDFSKELRQNLGEVIA
Ga0190274_112692842	3300018476	Soil	MDETQVRERAEAVCEALVAGDVGKATEDFSKELRQNLGEVVALLPLPATEGTVESIDRGGGSSF
Ga0190274_138910991	3300018476	Soil	MEESDVRERAEAMCAALVDGDIARATEDFSRELQQHLG
Ga0066669_107299953	3300018482	Grasslands Soil	MDEPALRERAAALCDALVAGDIDRATEDFSKELRQNLGTVLALLPLPSHEATVESV
Ga0193703_10593881	3300019876	Soil	MEEPQVRERAEAMCAALVAGDVGKATEDFSKELRQNLGEVVALLPLPATEATVDSIERGSSGFV
Ga0210382_103870902	3300021080	Groundwater Sediment	MDADAVRDHARAFSDALVAGDIERATADFSKELKQRLGEVLALFPL
Ga0210382_104349922	3300021080	Groundwater Sediment	MDEQAVREHAQALCDALVAGDVDKAIEVFSKELRQNLGEVIALLPLPSSEAT
Ga0210382_105212571	3300021080	Groundwater Sediment	MDEQAVRDRAQSLCDALVAGDIGLATEDLSKELRQNLGEVLSLLPLPSTGATIE
Ga0193699_101763451	3300021363	Soil	MDEQDVRAGAEALCGALVRGDIEQATEAFSVELRRNLGEV
Ga0247794_101720781	3300024055	Soil	MEEPQVRERAEAMCAALVAGDVGKATEAFSKELRQNLGEVVALLPLPATEATVDSIERGSSGF
Ga0208079_10825921	3300025481	Arctic Peat Soil	MEEQDVRERAEALCAAVVAGDIDRVIEDFSKELRQNLGEVLALLPLPSSEA
Ga0208587_10007471	3300025484	Arctic Peat Soil	MEEHDVRERAEALCAALVAGDIERVTEDFSKELRQHL
Ga0207932_10429432	3300025495	Arctic Peat Soil	MEEQDVRERAEALCAAVVAGDIDRVTEDFSKELRHNLGEVLALLPLPSNGATVESVDRGG
Ga0207931_100063810	3300025499	Arctic Peat Soil	MEEHDVRERAEALCVALVAGDIGRATEDFSKELREHLGEVLALL
Ga0209744_11335082	3300025692	Arctic Peat Soil	MDEQDVRERAEALCAALVAGDIERVTEDFSKELRQNLGEVLALLPLPSNEATVDSIDRGGGSGYTVVL
Ga0209123_12120781	3300025718	Arctic Peat Soil	MEEHDVRERAEALCVALVAGDIGRATEDFSKELRQNLGEVLALLPLPSNEATVESIDRGGGSGYT
Ga0209748_10072919	3300025836	Arctic Peat Soil	MDEQDVRERAEALCAALVAGDIERVTEDFSKELRQNLGEVLALLPLPSNEATVDS
Ga0209538_12526482	3300025846	Arctic Peat Soil	MDEQAVRNRAQGVCEALVAGDIDRASEDFSKELRQNLGEVLALLPLPTNDASVESVEHGGAGFN
Ga0209124_100011669	3300025852	Arctic Peat Soil	MEEHDVRERAEALCVALVAGDIGRATEDFSKELREHLGEVLALLPLPSSEATVESIDRGGGSGYTVVLRLVG
Ga0209124_100818841	3300025852	Arctic Peat Soil	MEEQDVRERAEALCAAVVAGDIDRVTEDFSKELRHNLGEVLALLPLPSNGAT
Ga0209226_100882893	3300025865	Arctic Peat Soil	MDEQDVRERAEALCAAAVAGDIDRVIEDFSPELRHNLGEVLA
Ga0209226_101337513	3300025865	Arctic Peat Soil	MEEQDVREHAEALCAALVAGDIERVTEDFSKELRQNLGEVLAFLPLPSNEATVDSIDRGGGSGYTVVLRLVGETDEVLIQ
Ga0209226_102812862	3300025865	Arctic Peat Soil	MDEQDVRDRAEALCAAAVAGDIDRVIEDFSPELRHNLGEVLAL
Ga0209584_100945792	3300025878	Arctic Peat Soil	MDEQAVRNRAQGVCEALVAGDIDRASEDFSKELRQNLGEVLALLPLPTNDATVESVEHGGAGFN
Ga0209584_103102322	3300025878	Arctic Peat Soil	MDEQDVRERAEALCAAAVAGDIDRVIEDFSPELRHNLGEVLALLPLPSSHAT
Ga0209540_102655732	3300025888	Arctic Peat Soil	MEEQDVREHAEALCAALVAGDIERVTEDFSKELRQNLGEVLALLPLPSNE
Ga0209540_104624551	3300025888	Arctic Peat Soil	MEEQDVRERAEALCAALVAGDIERVTEDFSKELRQNLGEVLALLPLPSNE
Ga0209159_11126581	3300026343	Soil	MDEPALRERAAALCDALVAGDIDRATEDFSKELRQNLGTVLALLPLPSHEATVESVEHGGSGYNIMIRLVGETEEVLIQTRW
Ga0209808_13050751	3300026523	Soil	MDEPALRERAAALCDALVAGDIDRATEDFSKELRQNLGTVLALLPLPSHEATVESVEHGGSGYNIM
Ga0209807_13547042	3300026530	Soil	MDEPALRERAAALCDALVAGDIDRATEDFSKELRQNLGTVLALLPLPSHEATVESVEHGGSGYSIVIRLVGETEPLGREQGAAAEVVDED
Ga0209376_10721206	3300026540	Soil	MDEPALRERAAALCDALVAGDIDRATEDFSKELRQNLGTVLALLPLP
Ga0210366_102060821	3300028420	Estuarine	MDDQQVRERAEAMCAALVAGDVSRMSEDVSDELRQKLGEVLALLPLPTTEATVESITHGGAAYVVV
Ga0307293_100336833	3300028711	Soil	MDEQAVRDRAQSLCEALVAGDIGLATEDFSKELRQNLGEVLSLLPLPSTEATIESVEHAGPGYN
Ga0307284_103662341	3300028799	Soil	MVTDMDEEAIRGRAQALCSALVSGDIGRATEDFSRELRQNLGEVLSLLPLPATEA
Ga0307503_106972222	3300028802	Soil	MEEPQVRERAEAMCAALVAGDVGQATEAFSKELRQNLGEVVALLPLPATEATVDSIERGS
Ga0307292_100466191	3300028811	Soil	MDEQAVREHAQALCDALVAGDVDKAIEVFSKELRQNLGEVIALLPLPSSEATVESVEHGGAGYNVVIRLVG
Ga0307304_104580952	3300028885	Soil	MDEQAVRDRAQSLCEALVAGDIGLATEDFSKELRQNLGEVLSLLPLPSTEATIESVEHAGPGYNVTLR
Ga0311336_113656451	3300029990	Fen	MDEQGVRDRAEALCAAAVAGDIDRVIEDFSAELRHNLGEVLALLPLPANQATVETIERSGGSGGYA
Ga0299907_103360063	3300030006	Soil	MDEATVRARAQEMCDALVAGEIDRSTENFSPELRSNLGEVIAQLPL
Ga0299913_101874684	3300031229	Soil	MDEAIVRAHAQGFCDALIAGEIDRATEDFSPELRSNLGQVIAQLPLPITEATVESVEVG
Ga0299913_120739281	3300031229	Soil	MDADAVRDQAQSFGEALVAGDIERATEDLSAELRQRLGEVLA
Ga0307375_108214721	3300031669	Soil	MEEQDVRERAEALCAAVVAGDIDRVIEDFSKELRQNLGE
Ga0302321_1008895251	3300031726	Fen	MDEQDVRERAEALCAAAVAGDIDRVIEDFSPELRHNLGEVLALLPLPSSHATVETIERGGGSGYTVVLRLVGEAEEVQV
Ga0335394_105956401	3300032456	Freshwater	MEEPIVREHAEALCAALVAGDIERAIEELSPELRQNLGEVLALLPLPLTQATIESAERGSGSGFVVVIQLVGASETV
Ga0364924_008113_1761_1904	3300033811	Sediment	MDEQAVREHARALCAALVAGDIDRAIEDFSKELRQNLGEVLALLPLPS
Ga0364938_012886_1019_1192	3300034114	Sediment	MDEQAVREHARALCAALVAGDIDRAIEDFSKELRQNLGEVLALLPLPSNEATVESVDH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092942

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences