NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092927

Metagenome Family F092927

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092927
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 83 residues
Representative Sequence MKVLDTLTITEKGQAQFPASWRKQAGLMQGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEGQTVAFPRVKRHTMPFK
Number of Associated Samples 84
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 41.12 %
% of genes near scaffold ends (potentially truncated) 16.82 %
% of genes from short scaffolds (< 2000 bps) 68.22 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (85.047 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog
(20.561 % of family members)
Environment Ontology (ENVO) Unclassified
(24.299 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(34.579 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.64%    β-sheet: 15.45%    Coil/Unstructured: 70.91%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF01850PIN 28.97
PF04055Radical_SAM 2.80
PF04542Sigma70_r2 1.87
PF00248Aldo_ket_red 1.87
PF13204DUF4038 1.87
PF02604PhdYeFM_antitox 0.93
PF04255DUF433 0.93
PF13091PLDc_2 0.93
PF00472RF-1 0.93
PF00873ACR_tran 0.93
PF00687Ribosomal_L1 0.93
PF03703bPH_2 0.93
PF01041DegT_DnrJ_EryC1 0.93
PF13476AAA_23 0.93
PF13580SIS_2 0.93
PF03104DNA_pol_B_exo1 0.93
PF01609DDE_Tnp_1 0.93
PF02978SRP_SPB 0.93
PF04264YceI 0.93
PF00453Ribosomal_L20 0.93
PF00528BPD_transp_1 0.93
PF04845PurA 0.93
PF00654Voltage_CLC 0.93
PF12543DUF3738 0.93
PF08338DUF1731 0.93
PF12857TOBE_3 0.93
PF00593TonB_dep_Rec 0.93
PF03745DUF309 0.93
PF02355SecD_SecF 0.93
PF06144DNA_pol3_delta 0.93
PF07927HicA_toxin 0.93
PF00132Hexapep 0.93
PF14310Fn3-like 0.93
PF00085Thioredoxin 0.93
PF07971Glyco_hydro_92 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 1.87
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 1.87
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 1.87
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 1.87
COG0038H+/Cl- antiporter ClcAInorganic ion transport and metabolism [P] 0.93
COG0081Ribosomal protein L1Translation, ribosomal structure and biogenesis [J] 0.93
COG0216Protein chain release factor RF1Translation, ribosomal structure and biogenesis [J] 0.93
COG0292Ribosomal protein L20Translation, ribosomal structure and biogenesis [J] 0.93
COG0341Preprotein translocase subunit SecFIntracellular trafficking, secretion, and vesicular transport [U] 0.93
COG0342Preprotein translocase subunit SecDIntracellular trafficking, secretion, and vesicular transport [U] 0.93
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.93
COG0417DNA polymerase B elongation subunitReplication, recombination and repair [L] 0.93
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.93
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.93
COG0541Signal recognition particle GTPaseIntracellular trafficking, secretion, and vesicular transport [U] 0.93
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.93
COG1090NAD dependent epimerase/dehydratase family enzymeGeneral function prediction only [R] 0.93
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 0.93
COG1186Protein chain release factor PrfBTranslation, ribosomal structure and biogenesis [J] 0.93
COG1466DNA polymerase III, delta subunitReplication, recombination and repair [L] 0.93
COG1547Predicted metal-dependent hydrolaseFunction unknown [S] 0.93
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 0.93
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.93
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 0.93
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 0.93
COG2812DNA polymerase III, gamma/tau subunitsReplication, recombination and repair [L] 0.93
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.93
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.93
COG3293TransposaseMobilome: prophages, transposons [X] 0.93
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.93
COG3402Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 0.93
COG3428Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 0.93
COG3537Putative alpha-1,2-mannosidaseCarbohydrate transport and metabolism [G] 0.93
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.93
COG5421TransposaseMobilome: prophages, transposons [X] 0.93
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.93
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.05 %
UnclassifiedrootN/A14.95 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2100351007|LWFCAn_GLQU6AQ01DITAKNot Available512Open in IMG/M
3300001398|JGI20207J14881_1000774All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia11449Open in IMG/M
3300002408|B570J29032_109545819All Organisms → cellular organisms → Bacteria → PVC group858Open in IMG/M
3300003321|soilH1_10303246All Organisms → cellular organisms → Bacteria → Proteobacteria1710Open in IMG/M
3300004805|Ga0007792_10077011Not Available1013Open in IMG/M
3300004806|Ga0007854_10040583All Organisms → cellular organisms → Bacteria2366Open in IMG/M
3300004806|Ga0007854_10176989All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300006052|Ga0075029_100472026All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300006638|Ga0075522_10006767All Organisms → cellular organisms → Bacteria7962Open in IMG/M
3300006950|Ga0075524_10362527All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae638Open in IMG/M
3300009159|Ga0114978_10762813Not Available547Open in IMG/M
3300009161|Ga0114966_10066674All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2500Open in IMG/M
3300009175|Ga0073936_10011015All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales11019Open in IMG/M
3300009175|Ga0073936_10044998All Organisms → cellular organisms → Bacteria4186Open in IMG/M
3300009430|Ga0114938_1015016All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3338Open in IMG/M
3300009502|Ga0114951_10072574All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae2013Open in IMG/M
3300009684|Ga0114958_10120743All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1341Open in IMG/M
3300014160|Ga0181517_10470653All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae638Open in IMG/M
3300014161|Ga0181529_10000027All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia169148Open in IMG/M
3300014493|Ga0182016_10268727All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1058Open in IMG/M
3300014495|Ga0182015_10283136Not Available1087Open in IMG/M
3300014499|Ga0182012_10003163All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia17587Open in IMG/M
3300014501|Ga0182024_10121347All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium3738Open in IMG/M
3300014655|Ga0181516_10131422Not Available1267Open in IMG/M
3300017988|Ga0181520_10000095All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia169148Open in IMG/M
3300020048|Ga0207193_1493980All Organisms → cellular organisms → Bacteria → PVC group812Open in IMG/M
3300020057|Ga0163151_10028983All Organisms → cellular organisms → Bacteria4443Open in IMG/M
3300020164|Ga0194037_1053797All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1519Open in IMG/M
3300020186|Ga0163153_10227437Not Available918Open in IMG/M
3300020513|Ga0208090_1053694Not Available504Open in IMG/M
3300020581|Ga0210399_10674242Not Available851Open in IMG/M
3300021069|Ga0194062_1039080All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1568Open in IMG/M
3300021070|Ga0194056_10016448Not Available3076Open in IMG/M
3300021070|Ga0194056_10109076All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae996Open in IMG/M
3300021072|Ga0194057_10102100All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Luteolibacter → Luteolibacter pohnpeiensis1045Open in IMG/M
3300021072|Ga0194057_10333554Not Available520Open in IMG/M
3300021075|Ga0194063_10160662All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae947Open in IMG/M
3300021181|Ga0210388_10000816All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales24866Open in IMG/M
3300021181|Ga0210388_11425037All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae581Open in IMG/M
3300021433|Ga0210391_10275108All Organisms → cellular organisms → Bacteria1321Open in IMG/M
3300021473|Ga0194043_1226413Not Available615Open in IMG/M
3300022555|Ga0212088_10008698All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales16893Open in IMG/M
3300022555|Ga0212088_10055460All Organisms → cellular organisms → Bacteria4166Open in IMG/M
3300022555|Ga0212088_10236439All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1397Open in IMG/M
3300023068|Ga0224554_1007833All Organisms → cellular organisms → Bacteria3954Open in IMG/M
3300023088|Ga0224555_1209418Not Available531Open in IMG/M
3300025106|Ga0209398_1059829All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → unclassified Verrucomicrobiae → Verrucomicrobiae bacterium Tous-C4TDCM966Open in IMG/M
3300025505|Ga0207929_1056550Not Available743Open in IMG/M
3300025679|Ga0207933_1000635All Organisms → cellular organisms → Bacteria32784Open in IMG/M
3300025838|Ga0208872_1031056All Organisms → cellular organisms → Bacteria2367Open in IMG/M
3300025838|Ga0208872_1142065All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae845Open in IMG/M
3300025891|Ga0209585_10304764All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae638Open in IMG/M
3300026283|Ga0209368_1078402All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae500Open in IMG/M
3300027563|Ga0209552_1178396Not Available536Open in IMG/M
3300027712|Ga0209499_1063585All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1475Open in IMG/M
3300027756|Ga0209444_10057700All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1722Open in IMG/M
3300027885|Ga0209450_10423392All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae972Open in IMG/M
3300027885|Ga0209450_10532229Not Available860Open in IMG/M
(restricted) 3300028559|Ga0247831_1163008All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae870Open in IMG/M
3300028666|Ga0265336_10023327All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1963Open in IMG/M
3300028745|Ga0302267_10029984All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae3527Open in IMG/M
3300028745|Ga0302267_10097111All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1454Open in IMG/M
3300028785|Ga0302201_10126049All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Aeoliella → unclassified Aeoliella → Aeoliella sp. ICT_H6.21124Open in IMG/M
3300028866|Ga0302278_10163318All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1146Open in IMG/M
3300028866|Ga0302278_10182798All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1059Open in IMG/M
3300029911|Ga0311361_10018950All Organisms → cellular organisms → Bacteria12869Open in IMG/M
3300029911|Ga0311361_10180124All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae2667Open in IMG/M
3300029911|Ga0311361_10217638All Organisms → cellular organisms → Bacteria2310Open in IMG/M
3300029911|Ga0311361_10330634All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1676Open in IMG/M
3300029911|Ga0311361_10855822All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae792Open in IMG/M
3300029911|Ga0311361_10956247All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300029913|Ga0311362_10976698All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae666Open in IMG/M
3300029915|Ga0311358_10086020All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae3304Open in IMG/M
3300029915|Ga0311358_10671476All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae767Open in IMG/M
3300029922|Ga0311363_10206361All Organisms → cellular organisms → Bacteria2374Open in IMG/M
3300029951|Ga0311371_10100059All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula4619Open in IMG/M
3300029951|Ga0311371_10643173All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1350Open in IMG/M
3300029952|Ga0311346_10485289All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300029953|Ga0311343_11043973All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae638Open in IMG/M
3300029957|Ga0265324_10034596All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1759Open in IMG/M
3300029957|Ga0265324_10097030All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1002Open in IMG/M
3300030503|Ga0311370_10462134All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1571Open in IMG/M
3300030519|Ga0302193_10186103All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1174Open in IMG/M
3300030520|Ga0311372_11398722All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae873Open in IMG/M
3300030688|Ga0311345_10566415All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae954Open in IMG/M
3300030688|Ga0311345_10774881All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae757Open in IMG/M
3300030737|Ga0302310_10233175All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1060Open in IMG/M
3300030743|Ga0265461_13262144All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae547Open in IMG/M
3300031231|Ga0170824_103711052All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae566Open in IMG/M
3300031259|Ga0302187_10344463All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae720Open in IMG/M
3300031525|Ga0302326_10783610All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula1377Open in IMG/M
3300031726|Ga0302321_102989567All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae552Open in IMG/M
3300031788|Ga0302319_11606422All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae572Open in IMG/M
3300031788|Ga0302319_11900030All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae510Open in IMG/M
3300031813|Ga0316217_10000609All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia49696Open in IMG/M
3300031813|Ga0316217_10329567All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae584Open in IMG/M
3300031951|Ga0315904_10000622All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales56378Open in IMG/M
3300032018|Ga0315272_10252803Not Available848Open in IMG/M
3300032722|Ga0316231_1279425All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae670Open in IMG/M
3300033402|Ga0326728_10018620All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia13655Open in IMG/M
3300033984|Ga0334989_0209158All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → unclassified Verrucomicrobiae → Verrucomicrobiae bacterium Tous-C4TDCM1070Open in IMG/M
3300033995|Ga0335003_0236394All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae853Open in IMG/M
3300033996|Ga0334979_0117638All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae1638Open in IMG/M
3300034022|Ga0335005_0021660All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Haloferula → unclassified Haloferula → Haloferula sp. BvORR0714503Open in IMG/M
3300034051|Ga0335024_0025070All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae3383Open in IMG/M
3300034051|Ga0335024_0052504All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → unclassified Verrucomicrobiae → Verrucomicrobiae bacterium Tous-C4TDCM2305Open in IMG/M
3300034357|Ga0335064_0021578All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → unclassified Verrucomicrobiae → Verrucomicrobiae bacterium Tous-C4TDCM3403Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog20.56%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater7.48%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater7.48%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater5.61%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil5.61%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.61%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion4.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.67%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.74%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater2.80%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.80%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake1.87%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.87%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat1.87%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater1.87%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog1.87%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.87%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.87%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.93%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment0.93%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.93%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.93%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment0.93%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.93%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.93%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.93%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.93%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.93%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.93%
Wastewater TreatmentEngineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Wastewater Treatment0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2100351007Sediment microbial communities from Lake Washington, Seattle, for Methane and Nitrogen Cycles, sample from flow sorted aerobic plus nitrateEnvironmentalOpen in IMG/M
3300001398Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012EnvironmentalOpen in IMG/M
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300004805Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6MEnvironmentalOpen in IMG/M
3300004806Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006950Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-oneEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009175Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaGEnvironmentalOpen in IMG/M
3300009430Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big SpringEnvironmentalOpen in IMG/M
3300009502Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaGEnvironmentalOpen in IMG/M
3300009684Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaGEnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014161Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300020057Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2EnvironmentalOpen in IMG/M
3300020164Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L304-6mEnvironmentalOpen in IMG/M
3300020186Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1EnvironmentalOpen in IMG/M
3300020513Freshwater microbial communities from Lake Mendota, WI - 20JUL2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021069Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L224-25mEnvironmentalOpen in IMG/M
3300021070Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-13mEnvironmentalOpen in IMG/M
3300021072Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-15mEnvironmentalOpen in IMG/M
3300021075Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L373-20mEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021473Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-15mEnvironmentalOpen in IMG/M
3300022555Alinen_combined assemblyEnvironmentalOpen in IMG/M
3300023068Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24EnvironmentalOpen in IMG/M
3300023088Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34EnvironmentalOpen in IMG/M
3300025106Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring (SPAdes)EnvironmentalOpen in IMG/M
3300025505Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025679Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025838Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08 (SPAdes)EnvironmentalOpen in IMG/M
3300025891Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)EnvironmentalOpen in IMG/M
3300026283Wastewater treatment Type I Accumulibacter community from EBPR Bioreactor in Madison, WI, USA - Reactor 1_4/24/2008_ DNA (SPAdes)EngineeredOpen in IMG/M
3300027563Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027712Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027756Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300028559 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_1mEnvironmentalOpen in IMG/M
3300028666Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaGHost-AssociatedOpen in IMG/M
3300028745Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3EnvironmentalOpen in IMG/M
3300028785Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2EnvironmentalOpen in IMG/M
3300028866Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2EnvironmentalOpen in IMG/M
3300029911III_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029913III_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300029952II_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029953II_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029957Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaGHost-AssociatedOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030519Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030688II_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300030737Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2EnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031259Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300031813Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoAEnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300032018Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middleEnvironmentalOpen in IMG/M
3300032722Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033984Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030EnvironmentalOpen in IMG/M
3300033995Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056EnvironmentalOpen in IMG/M
3300033996Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004EnvironmentalOpen in IMG/M
3300034022Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058EnvironmentalOpen in IMG/M
3300034051Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097EnvironmentalOpen in IMG/M
3300034357Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME12May2017-rr0187EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
LWFCAn_020841902100351007Freshwater SedimentTEKGQAQFPASWRKQAGLMHGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEGQSVAFPKVKRHTMPFK
JGI20207J14881_1000774133300001398Arctic Peat SoilMADLNTLTLTAKGQAQFPVGWRRQAGLLRGGPCDVRVIDDGRQSLLITPRIQKRRGAVGLLAHLKRQKLPFPKVERHVLPYK*
B570J29032_10954581923300002408FreshwaterMNHYYMKPLDTLTITEKGQAQFPASWRKQAGLMHGGPCDVRVLDDGRQSLLITPRPKKRRGAVGLLAHLEDQTIAFPKVKRHTMPFK*
soilH1_1030324633300003321Sugarcane Root And Bulk SoilMRELDTITITEKGQATFPASWRRQVGLLRGGPCDVRVLNDGRQSLLITPRTQRRRGATGLQLLAHLKKQKAAFPPVERHFMPFK*
Ga0007792_1007701123300004805FreshwaterMDYYLMKVLDTLTITEKGQAQFPAGWRKQAGLMHGGPCDVRVLDDGRQSLLITPRPQKRRGAAGLLAHLEAQSVAFPKVKRHTMPFK*
Ga0007854_1004058313300004806FreshwaterMRKFETITVTAKGQAQFPAAWRKLAGLMQGGPCDVRPLNDGRQSLIITPRPQKRRGATGLLAHLKRQKLPFPKVERHPLPFNVAHFKLLEPLGLEVVNPLA*
Ga0007854_1017698923300004806FreshwaterMRDFETITITAKGQAQFPAGWRKLAGLAQGGSCDVRLANDGRQSLIITPRVRTRRGAVGLLAHLQRQEVPFPKVERHHLPFK*
Ga0075029_10047202623300006052WatershedsMISGPVLDATAKVRNHYLMRELDTLTITEKGQATFPAAWRRQVGLLRGGPCDVRVLNDGRQSLLITPRAQKRRGATGLQLLAHLKKQAIAFPPVERHVMPFK*
Ga0075522_1000676733300006638Arctic Peat SoilMDYYFMADLDTLTLTAKGQAQFPVGWRRQAGLLRGGPCDVRVIDDGRQSLLITPRVQKRRGAVGLLAHLKRQKLPFPKIERHVLPYK*
Ga0075524_1036252723300006950Arctic Peat SoilMRELDTITITVKGQAQFPASWRKQAGLSRGGPCDVRPLNDGRQSLIITPRARPRRGAAGLLKHLETFSVSLPEVERHLMPSK*
Ga0114978_1076281313300009159Freshwater LakeMKYYHMKALDTLTITEKGQAQFPVSWRKQVGLMKGGPCEVRVLDDGRHSLLITPRPQKRRGAVGLLAHLEGQTIAFPKVERHTMPSK*
Ga0114966_1006667443300009161Freshwater LakeMKYYHMKALDTLTITEKGQAQFPVSWRTQVGLMKGGPCEVRVLDDGRHSLLITPRPQKRRGAVGLLAHLEGQTIAFPKVERHTMPFK*
Ga0073936_10011015113300009175Freshwater Lake HypolimnionMKVLDTLTITDKGQAQFPVSWRKLAGLMHGGPCDVRVLDDGRQSLLITPRQQKRRGAVGLLAHLQGQTVAFPKVERHTMPFK*
Ga0073936_1004499863300009175Freshwater Lake HypolimnionMNRYHMKVLDTLTITDKGQAQFPVSWRKQAGLMHGGPCDVRVLDDGRQSLLITPRQQKRRGAVGLLAHLQGQTVAFPKVERHTMPFK*
Ga0114938_101501633300009430GroundwaterMNHYRMRNLDTITITEKGQAQFPASWRKQAGLMRGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEDQPVAFPKVERHTMPFK*
Ga0114951_1007257433300009502FreshwaterMRNFDTITITAKGQAQFPVKWRKLAGLALGGSCDVRPANDGRQSLIITPRVRTRLGAVGLLAHLQRQEVPFPKVERHHLPFK*
Ga0114958_1012074323300009684Freshwater LakeMDYYHMKVLDTLTITEKGQAQFPASWRKQAGLVHGGPCDVRVLDDGRLSLLITPRPQKRRGAVGLLAHLEGQSVAFPKVKRHTMPFK*
Ga0181517_1047065323300014160BogMRDLETITITEKGQAQFPASWRKLAGLAQGGPCDVRPLNDGRQSLIITPRPQKRRGVSGLLAHLKRQEMPFPKVERHPLPFK*
Ga0181529_1000002773300014161BogMRDLETITITEKGQAQFPASWRKLAGLAQGGPCDVRPLNDGRQSLIITPRAQKRRGASGLLAYLKRQEVPFPKVERHHLPFK*
Ga0182016_1026872733300014493BogMRELQTLTITEKGQAQFPASWRKTAGLMHGGPCDVRLVNDGRQSLLITPRPRRRRGAVGLLKHLQNQPAAFPKGERHTMPAK*
Ga0182015_1028313613300014495PalsaMDYYFMADLDTLTLTAKGQAQFPVGWRRQAGLLRGGPCDVRVIDDGRQSLLITPRVQKRRGAVGLLTHLKRQKLPFPKIERHVLPYK*
Ga0182012_1000316383300014499BogMRELQTLTITEKGQAQFPASWRKTAGLMHGGPCDVRLVNDGRQSLLITPRPRRRRGAVGLLKHLQNQPAAFPKVERHTMPAK*
Ga0182024_1012134733300014501PermafrostMRDLETITITEKGQAQFPASWRKLAGLAHGGPCDVRPLNDGRQSLIITPRAQKRRGAAGLLAHLKRQELPFPKVERHHLPFK*
Ga0181516_1013142223300014655BogMRNLNPMTITEKGLAQFPAARRKLAGLRHGGLCDVHLVDDGRQSLLITPRCQERRGAVGLLKHLQRQPAAYPKVERHTMPGK*
Ga0181520_1000009573300017988BogMRDLETITITEKGQAQFPASWRKLAGLAQGGPCDVRPLNDGRQSLIITPRAQKRRGASGLLAYLKRQEVPFPKVERHHLPFK
Ga0207193_149398013300020048Freshwater Lake SedimentSMKTLDTLTITEKGQAQFPASWRKQAGLLHGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEGQTIAFPKVKRHTMPFK
Ga0163151_1002898383300020057Freshwater Microbial MatMNHYYWNMRHLDTITITEKGQATFPASWRRDVGLLHGGPCDVRILDDGRKSLLITPRVQKRRGAAGLLAHLKKQTVAFPVVERHVMPLK
Ga0194037_105379723300020164Anoxic Zone FreshwaterMDHYRMKVLDTLTITEKGQAQFPASWRKQAGLVHGGPCDVRVLDDGRLSLLITPRPQKRRGAVGLLAHLEGQSVAFPKVKRHTMPFK
Ga0163153_1022743713300020186Freshwater Microbial MatMNHYYWNMRHLDTITITEKGQATFPASWRRDVGLLHGGPCDVRILDDGRKSLLITPRVQKRRGAAGLLAHLKKQTVAFPLVERHVMPLK
Ga0208090_105369423300020513FreshwaterMNHYYMKPLDTLTITEKGQAQFPASWRKQAGLMHGGPCDVRVLDDGRQSLLITPRPKKRRGAVGLLAHLEDQTIAFPKVKRHTMPFK
Ga0210399_1067424223300020581SoilMDYYIMADLDTLTLTAKGQAQFPVGWRRQAGLLRGGPCDVRVIDDGRQSLLITPRVQKRRGAVGLLAHLKRQKLPFPKVQRHVLPYK
Ga0194062_103908013300021069Anoxic Zone FreshwaterVMDYYRMRDLDTLTITEKGQAQFPASWRKQAGLVHGGPCDVRVLDDGRQSLLITPRPQKRRGAAGLLAHLEGQTVAFPKVKRHTMPFK
Ga0194056_1001644833300021070Anoxic Zone FreshwaterMNYYRMKVLDTLTITEKGQAQFPVSWRKQAGLMHGGPCDVRVLDDGRQSLLITPRSQKRRGAVGLLAHLEGQTVAFPKVKRHTMPFK
Ga0194056_1010907613300021070Anoxic Zone FreshwaterMDYYHVKVLDTLTITAKGQAQFPASWRKQEGLMRGGPCDVRVLDDGRQSLLITPRPQQRRGAAGLLAHLEGQTVAFPKVKRHTMPFQSHS
Ga0194057_1010210013300021072Anoxic Zone FreshwaterQFPASWRKQAGLMRGGPCDVRVLDDGRQSLLITPRPQQRRGAVGLLAHLEGQTVAFPKVKRHTMPFKSCA
Ga0194057_1033355413300021072Anoxic Zone FreshwaterMDYYHVKVLDTLTITAKGQAQFPASWRKQEGLMRGGPCDVRVLDDGRQSLLITPRPQQRRGAVGLLAHLEG
Ga0194063_1016066223300021075Anoxic Zone FreshwaterMDYYRMKVLDTLTITEKGQAQFPASWRKQAGLMHGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEGQTVAFPKVKRHTMPFK
Ga0210388_10000816253300021181SoilMNHYFMHRDLDTITITEKGQAQFPANWRKAAGLLHGGPCDVRVLNDGRQSLLITPRAQKRRGAAGLLAHLKNQNVAFPPVERHTMPFK
Ga0210388_1142503713300021181SoilRDLDTITITAKGQAQFPASWRKQAGLLKGGPCDVRVLNDGRQSLIITPRVQKRRGMVGLLAHLKRQKLPFPKVERHVMPFK
Ga0210391_1027510843300021433SoilMLDGSGNVMNYYSMRDLDTITITAKGQAQFPATWRRKAGLLKGGPCDVRPLNDGHNSLIITPRAQKRRGAVGLLAHLKKREFPFPKVERHILPFK
Ga0194043_122641313300021473Anoxic Zone FreshwaterMDCYRMKVLDTLTITEKGQAQFPASWRKQAGLMHGGPCDVRVLDDGRQSLLITPRPQQRRGAVGLLAHLEGQTVAFPKVKRHTMPFKSCA
Ga0212088_10008698113300022555Freshwater Lake HypolimnionMKVLDTLTITDKGQAQFPVSWRKLAGLMHGGPCDVRVLDDGRQSLLITPRQQKRRGAVGLLAHLQGQTVAFPKVERHTMPFK
Ga0212088_1005546033300022555Freshwater Lake HypolimnionMNRYHMKVLDTLTITDKGQAQFPVSWRKQAGLMHGGPCDVRVLDDGRQSLLITPRQQKRRGAVGLLAHLQGQTVAFPKVERHTMPFK
Ga0212088_1023643923300022555Freshwater Lake HypolimnionMRNFDTITITAKGQAQFPVKWRKLAGLALGGSCDVRPANDGRQSLIITPRVRTRLGAVGLLAHLQRQEVPFPKVERHHLPFK
Ga0224554_100783333300023068SoilMDYYFMADLDTLTLTAKGQAQFPVGWRRQAGLLRGGPCDVRVIDDGRQSLLITPRVQKRRGAVGLLAHLKRQKLPFPKIERHVLPYK
Ga0224555_120941823300023088SoilGQAQFPVGWRRQAGLLRGGPCDVRVIDDGRQSLLITPRVQKRRGAVGLLAHLKRQKLPFPKIERHVLPYK
Ga0209398_105982923300025106GroundwaterMNHYRMRNLDTITITEKGQAQFPASWRKQAGLMRGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEDQPVAFPKVERHTMPFK
Ga0207929_105655023300025505Arctic Peat SoilMADLDTLTLTAKGQAQFPVGWRRQAGLLRGGPCDVRMIDDGRQSLLITPRVQKRRGAVGLLAHLKRQKLPFPKIERHVLPYK
Ga0207933_1000635113300025679Arctic Peat SoilMADLNTLTLTAKGQAQFPVGWRRQAGLLRGGPCDVRVIDDGRQSLLITPRIQKRRGAVGLLAHLKRQKLPFPKVERHVLPYK
Ga0208872_103105643300025838FreshwaterMRKFETITVTAKGQAQFPAAWRKLAGLMQGGPCDVRPLNDGRQSLIITPRPQKRRGATGLLAHLKRQKLPFPKVERHPLPFNVAHFKLLEPLGLEVVNPLA
Ga0208872_114206523300025838FreshwaterMRDFETITITAKGQAQFPAGWRKLAGLAQGGSCDVRLANDGRQSLIITPRVRTRRGAVGLLAHLQRQEVPFPKVERHHLPFK
Ga0209585_1030476423300025891Arctic Peat SoilMRELDTITITVKGQAQFPASWRKQAGLSRGGPCDVRPLNDGRQSLIITPRARPRRGAAGLLKHLETFSVSLPEVERHLMPSK
Ga0209368_107840223300026283Wastewater TreatmentMNCYLMKSLDTLTITEKGQAQFPASWRKQAGLMHGGPCDVRVLDDGRQSLLITPRPQKRRGAAGLLKHLESQTVAFPKVERHTMPFK
Ga0209552_117839613300027563Freshwater LakeMKYYHKKAIDILTITEKGQAQFPVSWRNQVGLMKGGHCEIRVLDDGRHSLLITPRPQKRRGAVGLLAHLEGQTIAFPKVERHTMPFK
Ga0209499_106358513300027712Freshwater LakeMDYYHMKVLDTLTITEKGQAQFPASWRKQAGLVHGGPCDVRVLDDGRLSLLITPRPQKRRGAVGLLAHLEGQSVAFPKVKRHTMPFK
Ga0209444_1005770033300027756Freshwater LakeMNYYHMKALDTLTITEKGQAQFPVSWRNQVGLMKGGHCEVRVLDDGRHSLLITPRPQKRRGAVGLLAHLEGQTIAFPKVERHTMPFK
Ga0209450_1042339223300027885Freshwater Lake SedimentMNPYRMKVLDTLTITEKGQAQFPASWRKQAGLMHGGPCDVRMLDDGRQSLLITPRPQKRRGALGLLAHLESQTVAFPKVRRHTMPFK
Ga0209450_1053222923300027885Freshwater Lake SedimentMNHYHMKVLDTLTITEKGQAQFPASWRKQAGLMHGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEGQTVAFPKVKRHTMPFK
(restricted) Ga0247831_116300823300028559FreshwaterMNCYLMKALDTLTITEKGQAQFPASWRKQAGLMQGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLESQTVAFPRVKRHTMPFK
Ga0265336_1002332723300028666RhizosphereMNHYRMRELDTLTITAKGQAQFPASWRKQAGLSHGGPCDLRPLNDGRQSLIITPRVRQRRGAAGLLKHLETFSVSLPKVARHTMPLK
Ga0302267_1002998423300028745BogMTITEKGQAQFPASWRKTAGLLQGGPCDVRLVNDGRQSLLITPRRQQRRGAVGLLKHLQSQSAAFPKVERHIMPSK
Ga0302267_1009711113300028745BogMRELQTLTITEKGQAQFPASWRKTAGLMHGGPCDVRLVNDGRQSLLITPRPRRRRGAVGLLKHLQNQPAAFPK
Ga0302201_1012604923300028785BogMRELKTMTITEKGQAQFPASWRKTAGLLQGGPCDVRLVNDGRQSLLITPRRQQRRGAVGLLKHLQSQSAAFPKVERHIMPSK
Ga0302278_1016331833300028866BogMTITEKGQAQFPASWRKTAGLLQGGPCDVRLVNDGRHSLLITPRRQQRRGAVGLLKHLQSQSAAFPKVERHTMPAK
Ga0302278_1018279823300028866BogMSELKTMTITEKGQAQFPASWRKTAGLLQGGPCDVRIVNDGRQSLLITPRRQQRRGAVGLLKHLQNQPAAFPKVERHTMPLK
Ga0311361_10018950103300029911BogMRDLDTITITAKGQAQFPARWRKQAGLLKGGPCDVRELNDGRQSLIITPRVQKRRGAVGLLAHLKRQKLPFPKVERHVMPFK
Ga0311361_1018012433300029911BogMTITEKGQAQFPASWRKTAGLLQGGPCDVRLVNDGRQSLLITPRRQQRRGAVGLLKHLQSQSAAFPKVERHTMPAK
Ga0311361_1021763813300029911BogMRELQTLTITEKGQAQFPASWRKTAGLMHGGPCDVRLVNDGRQSLLITPRPRRRRGAVGLLKHLQNQPAAFPKGERHTMPAK
Ga0311361_1033063423300029911BogMTITEKGQAQFPASWRKTAGLLQGGPCDVRLVNDGRHSLLITPRRQQRRGAVGLLKHLQSQSVAFPKVERHTMPPK
Ga0311361_1085582223300029911BogMREFNTLTISEKGQAQFPAGWRKAAGLLQGGPCDVRLVNDGRQSLLIAPRRQQRRGAVGLLKHLRSQSVAFPKVERHTMPAKRAI
Ga0311361_1095624723300029911BogMRELKTMTITAKGQAQFPASWRKTVGLLHGGACDVRLVNDRRQSLLITPCRQQRRGAVGLLKHLQNQSAAFPKVERHTMPAK
Ga0311362_1097669823300029913BogTLTITEKGQAQFPASWRKTAGLMQGGPCDVRLVNDGRQSLLITPRPRRRRGAVGLLKHLQNQPAAFPKGERHTMPAK
Ga0311358_1008602033300029915BogMRELKTMTITEKGQAQFPASWRKTAGLLQGGPCDVRLVNDGRQSLLITPRRQQRRGAVGLLKHLQSQSAAFPKVERHTMPAK
Ga0311358_1067147613300029915BogMTITEKGQAQFPASWRKTAGLLQGGPCDVRLVNDGRHSLLITPRRQQRRGAVGLLKHLQSQSVAFPKVERHTMPSK
Ga0311363_1020636113300029922FenMSELKTMTITEKGQAQFPASWRKTAGLLQGGPCDVRMVNDGRQSLLITPRRQQRRGAVGLLKHLQNQPAAFPKVERHTMPLK
Ga0311371_1010005953300029951PalsaMRDLDTITITEKGQATFPSGWRRKAGLLKGGPCDVRILNDGRQSLLITPRPQKRRGASGLLAHLKKQTVAFPPVERNYMPA
Ga0311371_1064317323300029951PalsaMRDLDTITITAKGQAQFPASWRKQAGLLKGGPCDVRVLNDGRQSLIITPRVQKRRGMVGLLAHLKRQKLPFPKVERHVMPFK
Ga0311346_1048528923300029952BogMRELQTLTITEKGQAQFPASWRKTAGLMHGGPCDVRLVNDGRQSLLITPRPRRRRGAVGLLKHLQNQPAAFPKVERHTMPAK
Ga0311343_1104397313300029953BogMTITEKGQAQFPASWRKTAGLLQGGPCDVRLVNDGRHSLLITPRRQQRRGAVGLLKHLQSQSVAFPKV
Ga0265324_1003459633300029957RhizosphereMNHYIMRDLDTITITKKGQAQFPASWRKVAGLLQGGPCDVRVVNDGRQSLLITPRVQKRRGAAGLLAHLKSQTVAFPVVERHTMPAK
Ga0265324_1009703023300029957RhizosphereMNHYMMRDLDTITITKKGQAQFPASWRKVAGLLQGGPCDVRVVNDGRQSLLITPRVQKRRGAAGLLAHLKSQTVAFPLVERHTMPAK
Ga0311370_1046213433300030503PalsaDLDTITITAKGQAQFPASWRKQAGLLKGGPCDARVLNDGRQSLIITPRVQKRRGMVGLLAHLKKRKIPFPKVERHIMPFK
Ga0302193_1018610333300030519BogLVRELKTMTITEKGQAQFPASWRKTAGLLQGGPCDVRLVNDGRQSLLITPRRQQRRGAVGLLKHLQSQSAAFPKVERHIMPSK
Ga0311372_1139872213300030520PalsaMNHYFAMRDLDTITITEKGQATFPSGWRRKAGLLKGGPCDVRILNDGRQSLLITPRKQKRRGAAGLLAHLKKQTVGFPPVERNYLPAK
Ga0311345_1056641513300030688BogTFMRELKTMTITEKGQAQFPASWRKTAGLLQGGPCDVRLVNDGRQSLLITPRRQQRRGAVGLLKHLQSQSAAFPKVERHTMPAK
Ga0311345_1077488123300030688BogMTITEKGQAQFPASWRKTAGLLQGGPCDVRIVNDGRQSLLITPRRQQRRGAVGLLKHLQNQPAAFPKVERHTMPLK
Ga0302310_1023317513300030737PalsaMNHYFAMRDLDTITITEKGQATFPSGWRRKAGLLKGGPCDVRILNDGRQSLLITPRPQKRRGASGLLAHLKKQTVAFPPVERNYMPA
Ga0265461_1326214413300030743SoilETITITEKGQAQFPASWRKLAGLAHGGPCDVRPLNDGRQSLIITPRAQKRRGAAGLLAHLKRQELPFPKVERHHLPFK
Ga0170824_10371105213300031231Forest SoilMNHYFMHRDLDTLTITEKGQAQFPANWRKAAGLLHGGPCDVRVLNDGRQSLLITPRAQKRRGAAGLLAHLKSQTVAFPPVERHTMPFK
Ga0302187_1034446313300031259BogTITEKGQAQFPASWRKTAGLLQGGPCDVRLVNDGRQSLLITPRRQQRRGAVGLLKHLQSQSAAFPKVERHIMPSK
Ga0302326_1078361013300031525PalsaMRDLHTVTITDKGQAELPAKWRKAAGLLHGGSCDVRILNDGRQSLLITPRAQKRRGAAGLLAHLKNQTVAFL
Ga0302321_10298956713300031726FenMNCYHMKVLDTLTITEKGQAQFPASWRKLAGLMHGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEGQTVAFPKVKRHTMPFK
Ga0302319_1160642223300031788BogMRDLDTITITAKGQAQFPASWRKQAGLLKGGPCDVRELNDGRQSLIITPRVQKRRGAVGLLAHLKRQKLPFPKVERHVMPFK
Ga0302319_1190003013300031788BogMRELKTMTITAKGQAQFPASWRKTVGLLHGGACDVRLVNDGRQSLLITPRRQQRRGAVGLLKHLQNQSAAFPKVERHTMPAK
Ga0316217_10000609163300031813FreshwaterMRELGTITVTAKGQAQFPASWRKLAGLAQGGPCDVRPLNDGRQSLIITPRAQKRRGASGLLAHLKRQELPFPKVERHHLFFK
Ga0316217_1032956723300031813FreshwaterMGDLETITVTAKGQAQFPASWRKLAGLAQGGPCDVRPLNDGRQSLIITPRAQKRRGASGLLAHLKRQELPFPKVERHHLFFKRAS
Ga0315904_10000622263300031951FreshwaterMNHYCMKELDTLTITEKGQAQFPASWRKQAGLMRGGPCDVRVLDDGRQSLLITPRPQKRRGAAGLLAHLEGQTVAFPKVERHAMPFK
Ga0315272_1025280323300032018SedimentMNCYHMKVLDTLTITEKGQAQFPASWRKQAGLMHGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEGQTVAFPKVKRHTMPLK
Ga0316231_127942523300032722FreshwaterLTITAKGQAQFPASWRKQAGLLRGGPCDIRVLNDGRQSLIITPRVQKRRGAAGLLAHLKQREIPFPKVERHILPSK
Ga0326728_1001862023300033402Peat SoilMRDLETITVTEKGQAQFPASWRKLAGLAHGGPCDVRPLNDGRQSLIITPRVQKRRGASGLLAHLKRQAMPFPKVERHHLPFK
Ga0334989_0209158_604_8523300033984FreshwaterMKVLDTLTITEKGQAQFPASWRKQAGLMQGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEGQTVAFPRVKRHTMPFK
Ga0335003_0236394_551_8143300033995FreshwaterMNCYFMKALDTLTITEKGQAQFPASWRKQAGLMQGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEGQTVAFPRVKRHTMPFK
Ga0334979_0117638_78_3413300033996FreshwaterMNYYLMKVLDTLTITEKGQAQFPASWRKQAGLMQGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLKHLEGQTVAFPEVERHTMPFK
Ga0335005_0021660_3965_42283300034022FreshwaterMNHYRMKDLDTLTITAKGQAQFPASWRKQAGLMRGGPCDLRVLDDGRQSLLITPRPQKRRGAVGLLAHLEDQAVAFPKVERHTMPFK
Ga0335024_0025070_12_2603300034051FreshwaterMKALDTLTITEKGQAQFPASWRKQAGLMQGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEGQTVAFPRVKRHTMPFK
Ga0335024_0052504_2010_22733300034051FreshwaterMNCYFMKALDTLTITEKGQAQFPASWRKQAGLMQGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEGQTVAFPKVNRHTMPFK
Ga0335064_0021578_3174_34013300034357FreshwaterMNCYFMKALDTLTITEKGQAQFPASWRKQAGLMQGGPCDVRVLDDGRQSLLITPRPQKRRGAVGLLAHLEGQTVAF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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