Metagenome / Metatranscriptome Family F092662

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092662
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	99 residues
Representative Sequence	ASDGVRWEIAHVLRSGHANKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVDRILALRATSPELILMYYARPERDAYLIVARLAFEDTVPYATTQ
Number of Associated Samples	101
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	19.61 %
% of genes near scaffold ends (potentially truncated)	72.90 %
% of genes from short scaffolds (< 2000 bps)	83.18 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.486 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.953 % of family members)
Environment Ontology (ENVO)	Unclassified (25.234 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.729 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.60% β-sheet: 22.22% Coil/Unstructured: 53.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13676	TIR_2	6.54
PF13531	SBP_bac_11	5.61
PF01734	Patatin	1.87
PF00211	Guanylate_cyc	1.87
PF05589	DUF768	1.87
PF04311	DUF459	0.93
PF00027	cNMP_binding	0.93
PF00501	AMP-binding	0.93
PF07647	SAM_2	0.93
PF08379	Bact_transglu_N	0.93
PF12697	Abhydrolase_6	0.93
PF14015	DUF4231	0.93
PF01274	Malate_synthase	0.93
PF13091	PLDc_2	0.93
PF17158	MASE4	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.87
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.87
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.87
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.87
COG2225	Malate synthase	Energy production and conversion [C]	0.93
COG2845	Peptidoglycan O-acetyltransferase, SGNH hydrolase family	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
All Organisms	root	All Organisms	35.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
cellular organisms	root	All Organisms → cellular organisms	35.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.30 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.50 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.87 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.28 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	7.48 %
beta proteobacterium MWH-P2sevCIIIb	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium MWH-P2sevCIIIb	1.87 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.93 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.48 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.61 %
beta proteobacterium MWH-P2sevCIIIb	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium MWH-P2sevCIIIb	1.87 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.93 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.93 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.48 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.87 %
beta proteobacterium MWH-P2sevCIIIb	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium MWH-P2sevCIIIb	1.87 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.93 %
unclassified Rhodopseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas	0.93 %
Acinetobacter calcoaceticus/baumannii complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex	0.93 %
Methylorubrum populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi	0.93 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.48 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1.87 %
beta proteobacterium MWH-P2sevCIIIb	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium MWH-P2sevCIIIb	1.87 %
Rhodopseudomonas sp. AAP120	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. AAP120	0.93 %
Methylorubrum populi BJ001	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi → Methylorubrum populi BJ001	0.93 %
Acinetobacter baumannii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii	0.93 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.93 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_102691130	Not Available	576	Open in IMG/M
3300002126\|JGI24035J26624_1005411	Not Available	1223	Open in IMG/M
3300002886\|JGI25612J43240_1038098	Not Available	692	Open in IMG/M
3300003368\|JGI26340J50214_10092540	Not Available	782	Open in IMG/M
3300004152\|Ga0062386_100581865	Not Available	914	Open in IMG/M
3300004479\|Ga0062595_100436364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	955	Open in IMG/M
3300004633\|Ga0066395_10011251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3322	Open in IMG/M
3300005332\|Ga0066388_106719612	Not Available	579	Open in IMG/M
3300005441\|Ga0070700_100697046	Not Available	807	Open in IMG/M
3300005456\|Ga0070678_101973808	Not Available	552	Open in IMG/M
3300005466\|Ga0070685_11572592	Not Available	508	Open in IMG/M
3300005615\|Ga0070702_100366672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi → Methylorubrum populi BJ001	1020	Open in IMG/M
3300005713\|Ga0066905_101907602	Not Available	550	Open in IMG/M
3300006172\|Ga0075018_10172222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium MWH-P2sevCIIIb	1011	Open in IMG/M
3300006174\|Ga0075014_100301273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	845	Open in IMG/M
3300006354\|Ga0075021_10959247	Not Available	557	Open in IMG/M
3300007265\|Ga0099794_10318994	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300009038\|Ga0099829_10694902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	845	Open in IMG/M
3300009143\|Ga0099792_11165128	Not Available	522	Open in IMG/M
3300009792\|Ga0126374_10601964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	811	Open in IMG/M
3300010040\|Ga0126308_10047495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2480	Open in IMG/M
3300010043\|Ga0126380_11812998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	552	Open in IMG/M
3300010048\|Ga0126373_11012714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	896	Open in IMG/M
3300010358\|Ga0126370_12339056	Not Available	529	Open in IMG/M
3300010360\|Ga0126372_10985842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	853	Open in IMG/M
3300010361\|Ga0126378_10088712	All Organisms → cellular organisms → Bacteria → Proteobacteria	3018	Open in IMG/M
3300010361\|Ga0126378_11823671	Not Available	692	Open in IMG/M
3300010366\|Ga0126379_11487231	Not Available	783	Open in IMG/M
3300010366\|Ga0126379_13793613	Not Available	506	Open in IMG/M
3300010398\|Ga0126383_11403502	Not Available	788	Open in IMG/M
3300011271\|Ga0137393_11085601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	680	Open in IMG/M
3300012199\|Ga0137383_10879200	Not Available	654	Open in IMG/M
3300012202\|Ga0137363_11299063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	616	Open in IMG/M
3300012359\|Ga0137385_11231816	Not Available	610	Open in IMG/M
3300012897\|Ga0157285_10206793	Not Available	620	Open in IMG/M
3300012924\|Ga0137413_10977506	Not Available	662	Open in IMG/M
3300012929\|Ga0137404_11060430	Not Available	743	Open in IMG/M
3300012971\|Ga0126369_10118442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2434	Open in IMG/M
3300012971\|Ga0126369_12431063	Not Available	610	Open in IMG/M
3300013100\|Ga0157373_11075649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	602	Open in IMG/M
3300013308\|Ga0157375_10363780	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300015371\|Ga0132258_12112743	Not Available	1415	Open in IMG/M
3300016270\|Ga0182036_10133379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1743	Open in IMG/M
3300016294\|Ga0182041_10546512	Not Available	1011	Open in IMG/M
3300016357\|Ga0182032_11706909	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300016357\|Ga0182032_11868136	Not Available	525	Open in IMG/M
3300016371\|Ga0182034_10566509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii	955	Open in IMG/M
3300018000\|Ga0184604_10236758	Not Available	636	Open in IMG/M
3300018482\|Ga0066669_10925477	Not Available	782	Open in IMG/M
3300019882\|Ga0193713_1186583	Not Available	536	Open in IMG/M
3300019885\|Ga0193747_1008302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2507	Open in IMG/M
3300019886\|Ga0193727_1167184	Not Available	579	Open in IMG/M
3300019887\|Ga0193729_1282965	Not Available	502	Open in IMG/M
3300020010\|Ga0193749_1029585	Not Available	1065	Open in IMG/M
3300021178\|Ga0210408_11173561	Not Available	588	Open in IMG/M
3300021413\|Ga0193750_1081887	Not Available	598	Open in IMG/M
3300021418\|Ga0193695_1110360	Not Available	583	Open in IMG/M
3300021560\|Ga0126371_10283790	Not Available	1778	Open in IMG/M
3300021560\|Ga0126371_10637478	Not Available	1214	Open in IMG/M
3300021560\|Ga0126371_11325125	Not Available	853	Open in IMG/M
3300024330\|Ga0137417_1325120	Not Available	1559	Open in IMG/M
3300025315\|Ga0207697_10349020	Not Available	657	Open in IMG/M
3300025972\|Ga0207668_11397407	Not Available	631	Open in IMG/M
3300026377\|Ga0257171_1057872	Not Available	674	Open in IMG/M
3300026764\|Ga0207470_101850	Not Available	650	Open in IMG/M
3300026814\|Ga0207586_101435	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300027617\|Ga0210002_1026191	Not Available	956	Open in IMG/M
3300027671\|Ga0209588_1197383	Not Available	628	Open in IMG/M
3300027874\|Ga0209465_10096021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1452	Open in IMG/M
3300027882\|Ga0209590_10875913	Not Available	567	Open in IMG/M
3300027903\|Ga0209488_10724833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	711	Open in IMG/M
3300028715\|Ga0307313_10275390	Not Available	524	Open in IMG/M
3300028719\|Ga0307301_10245584	Not Available	584	Open in IMG/M
3300028768\|Ga0307280_10393937	Not Available	516	Open in IMG/M
3300028774\|Ga0302208_10157191	Not Available	557	Open in IMG/M
3300028784\|Ga0307282_10166084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium MWH-P2sevCIIIb	1049	Open in IMG/M
3300028824\|Ga0307310_10744148	Not Available	504	Open in IMG/M
3300028869\|Ga0302263_10200953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	794	Open in IMG/M
3300028884\|Ga0307308_10476695	Not Available	598	Open in IMG/M
3300030001\|Ga0302272_1097100	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300031057\|Ga0170834_108627953	Not Available	585	Open in IMG/M
3300031093\|Ga0308197_10099148	Not Available	859	Open in IMG/M
3300031226\|Ga0307497_10194453	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300031231\|Ga0170824_113792254	Not Available	1214	Open in IMG/M
3300031543\|Ga0318516_10006951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5267	Open in IMG/M
3300031546\|Ga0318538_10004182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5329	Open in IMG/M
3300031561\|Ga0318528_10185247	Not Available	1112	Open in IMG/M
3300031573\|Ga0310915_10058986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2500	Open in IMG/M
3300031640\|Ga0318555_10204689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1064	Open in IMG/M
3300031679\|Ga0318561_10157613	Not Available	1221	Open in IMG/M
3300031713\|Ga0318496_10191470	Not Available	1123	Open in IMG/M
3300031719\|Ga0306917_10242769	Not Available	1377	Open in IMG/M
3300031723\|Ga0318493_10033906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2340	Open in IMG/M
3300031753\|Ga0307477_10746605	Not Available	652	Open in IMG/M
3300031896\|Ga0318551_10022214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2970	Open in IMG/M
3300031912\|Ga0306921_12248049	Not Available	573	Open in IMG/M
3300031942\|Ga0310916_10252953	Not Available	1485	Open in IMG/M
3300031947\|Ga0310909_10051577	All Organisms → cellular organisms → Bacteria	3163	Open in IMG/M
3300031962\|Ga0307479_10683260	Not Available	1006	Open in IMG/M
3300032052\|Ga0318506_10016112	All Organisms → cellular organisms → Bacteria	2639	Open in IMG/M
3300032261\|Ga0306920_100029354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. AAP120	7818	Open in IMG/M
3300034820\|Ga0373959_0064193	Not Available	818	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.59%
Host-Associated	Host-Associated	8.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.11%
Plants	Host-Associated → Plants	8.41%
Aquatic	Environmental → Aquatic	7.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.67%
Freshwater	Environmental → Aquatic → Freshwater	3.74%
Sediment	Environmental → Aquatic → Sediment	3.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.74%
Peat	Environmental → Terrestrial → Peat	2.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.77%
Loam	Environmental → Terrestrial → Soil → Loam	6.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.30%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.80%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026764	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A2w-11 (SPAdes)	Environmental	Open in IMG/M
3300026814	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-10 (SPAdes)	Environmental	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028774	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E2_3	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030001	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1026911301	3300000955	Soil	VAHVLQSGHANKTLFFLNPAIDVQIRTRQLMEHFGVSAADLASVDVNRILAIRMTSPQQLILMFCKKPERDAYLVAARLAFGNHTEAGSENSGWG*
JGI24035J26624_10054112	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	ASDGVRWEIAHVLQSGHAGKTLFFLNPSTDVQTRKRQLQEDFGVSAADLASIDVDRVLALRTTSTDQLILMVCDKPERDAYLVAARLAFEGRAGNLTMSAKGR*
JGI25612J43240_10380981	3300002886	Grasslands Soil	TATMLARDADRIVLCVDASDGVRWEIAHVLQSGHAGKTLFFLNPSXDVQTRTRLLMEDFGVSASDLASVNIDRILALRATSPEQAILMFSAKPERDAYLVAARLAFEDTVAHATTP*
JGI26340J50214_100925401	3300003368	Bog Forest Soil	LARDADRIVLCVDASDGVRWEIAHVLREGHANKTLFFLNPSIDVRTRTRLLMEDFSVSAADLASVNVDSILALRLTSPEQPILMFCVKPERDAYLVVARLAFEDNRQADSAQVSVAA*
Ga0062387_1003508071	3300004091	Bog Forest Soil	RTRLLMEDFSVSAADLASVNVDSILALRLTSPEQPILMFCVKPERDAYLVVARLAFERSPVSVARDTAQPG*
Ga0062389_1010879582	3300004092	Bog Forest Soil	LFFLNPSIDVRMRTRLLMEDFSVSAADLASVNVDSILALRLTSPEQPILMFCVKPERDAYLVVARLAFERSPVSVARDTAQPG*
Ga0062386_1005818651	3300004152	Bog Forest Soil	IVLCVDASDGVRWEIAHVLREGHANKTLFFLNPSIDVRTRTRLLMEDFSVSAADLASVNVDSILALRLTSPEQPILMFCVKPERDAYLVVARLAFVDNRQADSAQVSVAA*
Ga0062595_1004363642	3300004479	Soil	LRSGHANKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVDRILALRVTSPEQLILMFYARPERDAYLVVARLAFEDSVAYTTTQ*
Ga0066395_100112512	3300004633	Tropical Forest Soil	VLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ*
Ga0066388_1067196121	3300005332	Tropical Forest Soil	VRWEIAHVLRSGHAGKTLFLLNPSVDAQTRSRLLMEDFGVPAASLTSVDVDRVLALRVTSPEHLTLTLCAKPERDAYLVAVRLAFDDVKVFKSVARPTGLEPVLPP*
Ga0070700_1006970462	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	WEIEHVLQSGHANKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVYRILALRATSPEQAISVFYAKPERDAYLVAARLAFEDTTAHATTL*
Ga0070678_1019738081	3300005456	Miscanthus Rhizosphere	TMLARDADRIVLCVDASNGVRWEIAHVLQTGYANKTLFFLNPSIDLETRTRLLMEDFGVSAADLASLNLDSILAVRLTSPDQPTLLFCAKPERDAYLVAARLAFENPAVHAASS*
Ga0070685_115725921	3300005466	Switchgrass Rhizosphere	ANKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVYRILALRATSPEQAISVFYAKPERDAYLVAARLAFEDTTAHAATL*
Ga0070702_1003666721	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	DASDGVRWEIAHVLQSGHANKTLFFLNPPVDVQTRTRLLMEDFGVSAADLASVNVYRILALRATSPEQAISVFYAKPERDAYLVAARLAFEDTTAHATTL*
Ga0066905_1019076021	3300005713	Tropical Forest Soil	RDADRIVLCIDASDGVRWEVANVLQSGYANKTLFFLNPSVDVQTRTRQLMEDFDVSAADLSSVDVDRILAIRVTSPEQLIFMFCKKPERDAYLVAARLAFEDQAGTV*
Ga0075018_101722222	3300006172	Watersheds	VLCVDASDGVRWEIAHVLQSGHAGKTLFFLNPSLDVQTRTRLLMEDFAVSAADLASVNVDRILALRATSPEQAILMFCAKPERDAYLVVARLAFEDAVAHVTTP*
Ga0075014_1003012732	3300006174	Watersheds	VLQNGHASKTLFFINPSIDVQTRTGLLTQDFGVSVADVGSVDVDRLLALRATSPDQLVLMFSAKPERDSYLVAARLAFEDTVTLATHAVSAER*
Ga0075021_109592471	3300006354	Watersheds	TVTMLARDADRIVLCVDASGGVRWEIAHVLQSGHAGKTLFFLNPSVDVETRTRLLMEDFAVSAADLASVNVDRILALRATSPEQAILMFCAKPERDAYLVAARLAFEDSVAHVTTR*
Ga0099794_103189941	3300007265	Vadose Zone Soil	GHASKTLFFLNPSIDVPIRTRLLMEDFGVSVADLASVDVERILALRATSPEQAILMFCAKPERDAYLVVARLAFEDTVAHVTTP*
Ga0099829_106949021	3300009038	Vadose Zone Soil	DADRIVLCVDAGDGVRWEIAHVLQSGHADKTLFFLNPSVEVQTRTRLLTEDFGVSAADLASVNVERILALRATSPEQAILMFYAKPERDAYLVAARLAFEDTVAHVTKQ*
Ga0099792_111651282	3300009143	Vadose Zone Soil	TVTMLARDADRIVLCVDASHGVRWEIAHVLQSGHADKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNADRILALRATSPEQAILVFCAKPERDAYLVVARLAFEDTVAQVTTP*
Ga0126374_106019641	3300009792	Tropical Forest Soil	MLARDADRIVLCVDASDGVRWEIAHVLRSGHANKTLFFLNPSVDVQTRTRLLMEDFGACAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ*
Ga0126308_100474951	3300010040	Serpentine Soil	GVRWEIAHVLRNGHADKTLFFLNPSLDVKTRTRLLMEDFAVSAADLSSVDVNRILALRATSPEQPILMFCAKPERDAYLVVARLAFAGDVAPAMTQ*
Ga0126314_104060191	3300010042	Serpentine Soil	KALFFLNPSLDVKTRTRLLMEDFALSAADLSSVDVDRILALRATSPEQPILMFCAKPERDAYLVVARLAFAGDVAPAMTQ*
Ga0126380_118129982	3300010043	Tropical Forest Soil	WEIAHVLQAGHANKTVFFLNPSIDLRTRRRLLLEDFAASDADLTSINIDSILAIRLTSLDQPILLFCARPERDAYLVAARLAFEDPAVHAATLCSKPHVDTVKNNRL*
Ga0126373_110127141	3300010048	Tropical Forest Soil	GRGIVLCVDASDGVRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ*
Ga0126370_123390561	3300010358	Tropical Forest Soil	HGVRWEIAHVLRSGHAGKTLFLLNPSVDVQTRSRLLIEEFGVPAASLTSVDVDRVLALRVTSPGHLTLTLCARPERDAYLVAARLAFDDAKILK*
Ga0126372_109858422	3300010360	Tropical Forest Soil	LPTLGRGIVLCVDASNGARWEIAHVLRNGHANKTLFFLNPSVDVQSRTRLLIEDFGACAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ*
Ga0126378_100887125	3300010361	Tropical Forest Soil	VRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLIEDFGACAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ*
Ga0126378_118236712	3300010361	Tropical Forest Soil	VLCVDASDGVRWEIAHVLRSGHATKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVDRILALRATSPELILMYYARPERDAYLIVARLAFEDTVPYATTQ*
Ga0126379_114872312	3300010366	Tropical Forest Soil	ASDGVRWEIAHVLRSGHANKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVDRILALRATSPELILMYYARPERDAYLIVARLAFEDTVPYATTQ*
Ga0126379_137936131	3300010366	Tropical Forest Soil	GHAKKTLFFLNPSIDVRTRTRLLMEDFGVSAADLASVNLDSIVALRLTSPEQPILMLCAKPERDAYLVAARLAFEDPAAQAATS*
Ga0126383_114035022	3300010398	Tropical Forest Soil	VRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ*
Ga0137393_110856012	3300011271	Vadose Zone Soil	DADRIVLCVDASDGVRWEIAHVLRSGHADKTLFFLNPSVDVQTRTRLLVEDFGVSAADLASVNVDRILALRATSPEQAITMFCAKPERDAYLVVARLAFEDTVAHATTP*
Ga0137364_111347931	3300012198	Vadose Zone Soil	KTLFFLNPSIDVQTRTRLLMEDFGVSAADLASVNVDCILALRATSPEQLILMFAKPERDSYLVAARLAFEDTVAHATTQ*
Ga0137383_108792001	3300012199	Vadose Zone Soil	ASDGVRWEIAHVLRSGHASKTLFFLNPSIDVQTRTRLLMEEFGVSAADLASVDVDRILALRATLPEPAILMFCAKPERDAYLVVARLAFEDTVAHVTTP*
Ga0137363_112990631	3300012202	Vadose Zone Soil	EIAHVLQSGHAGKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNIDRILALRATSPEQAILMFSAKPERDAYLVVARLAFEDTVAHATTP*
Ga0137384_108055372	3300012357	Vadose Zone Soil	LFFLNPSVDVQTRTRLLVEDFGVSAADLASVNVDRILALRATSPEQAIMMFCAKPERDAYLVVARLAFEDTVAHVTTP*
Ga0137385_112318161	3300012359	Vadose Zone Soil	ARDADRIVLCVDASHGVRWEIAHVLQGGHADKTLFFLNPSVDVQTRTRLLVEDFGVSAADLASVDVDRILALRATLPEPAILMFCAKPERDAYLVAARLAFEDTVALVTTP*
Ga0157285_102067931	3300012897	Soil	TVTMLARDADRIVLCIDASDGVRWEIAHVLQSGHAGKTLFFLNPSTDVQTRKRQLQEDFGVSAADLASIDVDRVLALRTTSTDQLILMVCDKPERDAYLVAARLAFEGRAGNLTMSAKGR
Ga0137413_109775061	3300012924	Vadose Zone Soil	RIVLCVDASDGVRWEIAHVLQSGHAGKTLFFLNPSLDVQTRTRLLMEDFGVSASDLASVNIDRILALRATSPEQAILMFSAKPERDAYLVAARLAFEDTVAHATTP*
Ga0137404_110604301	3300012929	Vadose Zone Soil	GHAGKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNIDRILALRATSPEQAILMFSAKPERDAYLVVARLAFEDTVAHATKP*
Ga0126369_101184422	3300012971	Tropical Forest Soil	VRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACAADLGSVNVDRILALRATSPELILMFYARPERDAYLVVARLAFEDTVAYATMQ*
Ga0126369_124310632	3300012971	Tropical Forest Soil	VLNGHAKKTLFFLNPSIDVQTRTRLLREDFGVSPTDLASLNLHHLLALQAGPPEHLTLIFCSKPERDAYLVAARLAFDDNSRTA*
Ga0157373_110756491	3300013100	Corn Rhizosphere	IAHVLQNGHANKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVYRILALRATSPEQAISVFYAKPERDAYLVAARLAFEDTTAHATTL*
Ga0157375_103637802	3300013308	Miscanthus Rhizosphere	VLCVDASNGVRWEIAHVLQTGYANKTLFFLNPSIDLETRTRLLMEDFGVSAADLASLNLDSILAVRLTSPDQPTLLFCAKPERDAYLVAARLAFENPAVHAASS*
Ga0132258_121127432	3300015371	Arabidopsis Rhizosphere	ASDGVRWEIAHVLQSGHAGKTLFFLNPSTDVQTRKRQLQEDFAVSAADLASVDVDRILALHTTSTDHLILMMCDKPERDAYLVAARLAFEGLAGNQTISAKGQ*
Ga0182036_101333793	3300016270	Soil	VTMLARDADRIVLCVDASDGVRWEIAHVLRSGHATKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVDRILALRATSPELILMYYARPERDAYLIVARLAFEDTVPYATTQ
Ga0182041_105465122	3300016294	Soil	MLARDADRIVLCVDASDGVRWEIAHVLRSGHATKTLFFLNPSVDVQTRTRLLMEDFGASAADLGSVNVDRILALRPTSPELILMYYARPERDAYLIVARLAFEDTVPYATTQ
Ga0182032_117069092	3300016357	Soil	GHANKTLFFLNPSVDVQSRTRLLMEDFGACAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ
Ga0182032_118681361	3300016357	Soil	VRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGAWAADLGSVNVDRILALRATSPELILMYYAAPERDAYLVVARLAFADSVAHAITQ
Ga0182034_105665092	3300016371	Soil	VRWEIAHVLRSGHATKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVDRILALRATSPELILMYYARPERDAYLIVARLAFEDTVPYATTQ
Ga0184604_102367582	3300018000	Groundwater Sediment	DGVRWEIAHVLQSGHAGKTLFFLNPSLDVPTRTRLLMEDFGVSAAALASVTVDRILALRANSPEQEILMFCAKPERDAYLVVARLAFEDTVAHVTTP
Ga0066669_109254771	3300018482	Grasslands Soil	VLQSGHADKTLFFLNPSVDVQTRTRLLTEDFGVSAADLASVDVDRILALRSISPEQAILMFCAKPERDAYLVVARLAFEDT
Ga0193713_11865832	3300019882	Soil	MLARDADRIVLCVDASDGVRWEIAHVLQSGHAGKTLFFLNPSLDVQTRTRLLMEDFGVSASDLASVNIDRILALRATSPEQAILMFSAKPERDAYLVVARLAFEDAVAHVATS
Ga0193747_10083021	3300019885	Soil	DKTLFFLNPSVDVQTRTRLLVEDFGVSAADLASVNVDRILALRTISPEQAIMMFCAKPERDAYLVVARLAFEDTVAHVIEQ
Ga0193727_11671841	3300019886	Soil	TMLARDADRIVLCVDASHGVRWEIAHVLQSGHANKTLFFLNPSVDVETRTRLLVEDFGVSAADLASVNVDRILALRATSPEQAILMFCARPERDAYLVAARLAFEDTVAHVTKQ
Ga0193729_12829651	3300019887	Soil	KTLFFLNPSVDVQTRTRLLTEDFGVSAADLASVNVDRILALRATSPEQAIMMFCAKPERDAYLVVARLAFEDTVAHVIEQ
Ga0193749_10295851	3300020010	Soil	MLARDADRIVLCVDASHGVRWEIAHVLQGGHADKTLFFLNPSVDVQTRTRLLTEDFGVSAADLASVNVDRILALRTISPEQEILMFCAKPERDAYLVVARLAFEDTVAHVTTP
Ga0210408_111735611	3300021178	Soil	MLARDADRIVLCVDASDGVRWEIAHVLQAGHANKTLFFLNPSIDVATRSRLLMEDFGVSATDLAPLDLDSILAVRLTSPEQPRLLFCAKPERDAYLVVARIAFGDPAAYPGKL
Ga0193750_10818871	3300021413	Soil	RIVLCVDASHGVRWEIAHVLQGGHADKTLFFLNPSVDVQTRTRLLTEDFGVSAADLASVNVDRILALRTISPEQAIMMFCAKPERDAYLVVARLAFEDTVAHVIEQ
Ga0193695_11103601	3300021418	Soil	GHADKTLFFLNPSVDVQTRTRLLVEDFGVSAADLASVNVDRILALRTISPEQAIMMFCAKPERDAYLVVARLAFEDTVAHVIEQ
Ga0126371_102837902	3300021560	Tropical Forest Soil	RIVLCVDASDGVRWEIAHVLRSGHANKTLFFLNPSVDVQTRTRLLMEDFGVSPADLASVNVDRILALRATSPELILMYYARPERDAYLIVARLAFEDTVPYATTQ
Ga0126371_106374782	3300021560	Tropical Forest Soil	VRWEIAHVLRNGHANKTLFFLNPSVDVQSRTRLLMEDFGACAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ
Ga0126371_113251252	3300021560	Tropical Forest Soil	GHAKKTLFFLNPSIDVRTRTRLLMENFGVSAADLGSVNLDRVVALRLPSPKQPILMFCAKPERDAYLVAARLAFEDPAAQAATS
Ga0137417_13251202	3300024330	Vadose Zone Soil	MLARDADRIVLCVDASDGVRWEIAHVLQSGHADKTLFFLNPSLDVQTRTRLLMEDFGVSAADLASVNIDRILALRATSPEQAILMFSAKPERDAYLVVARLAFEDTVAHVATS
Ga0207697_103490201	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	DRIVLCVDASDGVRWEIAHVLQSGHANKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVYRILALRATSPEQAISVFYAKPERDAYLVAARLAFEDTTAHATTL
Ga0207668_113974071	3300025972	Switchgrass Rhizosphere	GVRWEIAHVLQSGHANKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVYRILALRATSPEQAISVFYAKPERDAYLVAARLAFEDTTAHATTL
Ga0257171_10578722	3300026377	Soil	DASDGVRWEIAHVLQSGHAGKTLFFLNPSLDVQTRTRLLMEDFGVSASDLASVNIDRILALRATSPEQAILMFSAKPERDAYLVAARLAFEDTVAHATTP
Ga0207470_1018501	3300026764	Soil	RIVLCIDASDGVRWEIAHVLQSGHAGKTLFFLNPSTDVQTRKRQLQEDFGVSAADLASIDVDRVLALRTTSTDQLILMVCDKPERDAYLVAARLAFEGRAGNLTMSAKGR
Ga0207586_1014351	3300026814	Soil	TMLARDADRIVLCIDASDGVRWEIAHVLQSGHAGKTLFFLNPSTDVQTRKRQLQEDFGVSAADLASIDVDRVLALRTTSTDQLILMVCDKPERDAYLVAARLAFEGRAGNLTMSAKGR
Ga0210002_10261911	3300027617	Arabidopsis Thaliana Rhizosphere	YASDGVRWEIAHVLQSGHAGKTLFFLNPSTDVQTRKRQLQEDFGVSAADLASIDVNRVLALRTTSTDQLILMVCDKPERDAYLVAARLAFEGRAGNLTMSAKGR
Ga0209588_11973831	3300027671	Vadose Zone Soil	MLARDADRIVLCVDASDGVRWEIAHVLQSGHAGKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNIDRILALRATSPEQAILMFSAKPERDAYLVVARLAFEDTVAHVATS
Ga0209465_100960213	3300027874	Tropical Forest Soil	VLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ
Ga0209590_108759131	3300027882	Vadose Zone Soil	CVDAGDGVRWEIAHVLQSGHADKTLFFLNPSVEVQTRTRLLMEDFGVSAADLASVNVERILALRATSPEQAILMFYAKPERDAYLVAARLAFEDTVAHVTKQ
Ga0209488_107248331	3300027903	Vadose Zone Soil	TVTMLARDADRIVLCVDASHGVRWEIAHVLQSGHADKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNADRILALRATSPEQAILVFCAKPERDAYLVVARLAFEDTVAQVTTP
Ga0307313_102753901	3300028715	Soil	LCVDASHGVRWEIAHVLQSGHADKTLFFLNPSVDVQTRTRLLTEDFGVSAADLASVNVDRILALRATSPEQAIMMFCAKPERDAYLVVARLAFEDTVAHVTTP
Ga0307301_102455841	3300028719	Soil	SGHADKTLFFLNPSVDVQTRTRLLTEDFGVSAADLASVNVDRILALRATSPEQSILMFCAKPERDAYLVVARLAFEDTVAHATAQ
Ga0307280_103939371	3300028768	Soil	ADRVVLCIDASDGVRWEVAHVLQSGHANKTLFFLNPAIDVQIRTRQLMEHFGVSAADLSSVDVNRILAIRMTSPQQLILMFCKKPERDAYLVAARLAFENHTEAESENSGSG
Ga0302208_101571911	3300028774	Fen	MLARDADRIVLCVDASDGVRWEIAHVLQGGHANKTLFFLNPSLDIRTRTRLLTEDFGVSAADLVPLNLDGVLALRLSSPERPILLFCAKPERDAYLVVARLAFGDPAASAATS
Ga0307282_101660841	3300028784	Soil	LCVDASHGVRWEIAHVLQGGHADKTLFFLNPSVDVQTRTRLLVEDFGVSAADLASVNVDRILALRATSPEQAIMMFCAKPERDAYLVVARLAFEDTVAHVTTP
Ga0307310_107441481	3300028824	Soil	EIAHVLQGGHADKTLFFLNPSVDVQTRTRLLTEDFGVSAADLASVNVDRILALRTISPEQAIMMFCAKPERDAYLVVARLAFEDTVAHVIEQ
Ga0302263_102009532	3300028869	Fen	MLARDADRIVLCVDASDGVRWEIAHVLQGGHANKTLFFLNPSLDIRTRTRLLTEDFGVSAADLVPLNLDGVLALRLSSPERPILLFCAKPERDANLVVARLAFGDPAASAATS
Ga0307308_104766951	3300028884	Soil	ARDADRIVLCVDASDGVRWEIAHVLQGGHADKTLFFLNPSVDVQTRTRLLTEDFGVSAADLASVNVDRILALRTISPEQAIMMFCAKPERDAYLVVARLAFEDTVAHVIEQ
Ga0302272_10971001	3300030001	Bog	HVLQGGHANKTLFFLNPSLDIRTRTRLLTEDFGVSAADLVPLNLDGVLALRLSSPERPILLFCAKPERDAYLVVARLAFGDPAASAATS
Ga0170834_1086279531	3300031057	Forest Soil	KTLFFLNPSVDVQTRTRLLLEDFGVSAADLASVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATTQ
Ga0308197_100991482	3300031093	Soil	EIAHVLQGGHADKTLFFLNPSVDVQTRTRLLVEDFGVSAADLASVNVDRILALRATSPEQAIMMFCAKPERDAYLVVARLAFEDTVAHVTTP
Ga0307497_101944532	3300031226	Soil	LCIDASDGVRWEIAHVLQSGHANKTLFFLNPSIDVQTRTRQLMEDFGVSAAHLASVDVDRILALRTTSPDQLILMLCDKPERDAYLVAARLAFEHQAGGLTMSALGH
Ga0170824_1137922541	3300031231	Forest Soil	ASDGVRWEIAHVLRSGHANKTLFFLNPSIDVQTRTRQLMEDFGVSAAHLASVDVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATTQ
Ga0318516_100069517	3300031543	Soil	VCRCSDGVRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACATDLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ
Ga0318538_100041826	3300031546	Soil	VCRCSDGVRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ
Ga0318528_101852471	3300031561	Soil	VCRCSDGVRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAF
Ga0310915_100589864	3300031573	Soil	VLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACATDLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ
Ga0318555_102046891	3300031640	Soil	DAHWQETVTMLARDADRIVLCVDASDGVRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACATDLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATM
Ga0318561_101576132	3300031679	Soil	MLARDADRIVLCVDASDGVRWEIAHVLRSGHATKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVDRILALRATSPELILMYYARPERDAYLIVARLAFEDTVPYATTQ
Ga0318496_101914703	3300031713	Soil	VCRCSDGVRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGAWAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ
Ga0306917_102427691	3300031719	Soil	VRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACATDLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ
Ga0318493_100339062	3300031723	Soil	VCRCSDGVRWEIAHVLRSGYANKTLFFLNPSVDVQSRTRLLMEDFGACAADLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ
Ga0307477_107466051	3300031753	Hardwood Forest Soil	WEIAHVLRNGHANKTLFFVNPSTDVQTRTRLLTEDFGVSAAGLASVDVDRILALQATSPEQLILIFCAKPERDAYLIAARLAFEDKTAFAPNRANEAGVDGKTLDP
Ga0318551_100222142	3300031896	Soil	VLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACATDLGSVNVDRILALRATSPELILMYYARPERDAYLVVERLAFEDTVAYATMQ
Ga0306921_122480491	3300031912	Soil	CVDASDGVRWEIAHVLRSGHANKTLFFLNPAVDVQTRIRLLMEDFGAFAADLGSVNVDRILALRVTSPELILMYYAAPERDAYLVVARLAFADSVAHAITQ
Ga0310916_102529531	3300031942	Soil	WEIAHVLRSGHANKTLFFLNPSVDVQTRTRLLMEDFGVSAADLASVNVDRILALRATSPELILMYYARPERDAYLIVARLAFEDTVPYATTQ
Ga0310909_100515771	3300031947	Soil	VCRCSDGVRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACATDLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAF
Ga0307479_106832602	3300031962	Hardwood Forest Soil	CVDASAGVRWEIAHVLRNGHATKTLFFVNPLTDAQTRTRLLTEDFGVSAADLVSVDVDRLLALRATSPEQLILIFCAKPERDAYLVAARLAFEDK
Ga0318506_100161121	3300032052	Soil	GVRWEIAHVLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACATDLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAFEDTVAYATMQ
Ga0306920_1000293541	3300032261	Soil	VLRSGHANKTLFFLNPSVDVQSRTRLLMEDFGACATDLGSVNVDRILALRATSPELILMYYARPERDAYLVVARLAF
Ga0373959_0064193_51_350	3300034820	Rhizosphere Soil	VRWEIAHVLQSGHAGKTLFFLNPSTDVQTRKRQLQEDFGVSAADLASVDVDRVLALRTTSTDQLILMVCDKPERDAYLVAARLAFEGRAGNLTMSAKGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092662

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences