Metagenome / Metatranscriptome Family F091661

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091661
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	129 residues
Representative Sequence	MDGPHDIDQSTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYNGPNLGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQG
Number of Associated Samples	100
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.17 %
% of genes near scaffold ends (potentially truncated)	93.46 %
% of genes from short scaffolds (< 2000 bps)	85.98 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.439 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.645 % of family members)
Environment Ontology (ENVO)	Unclassified (42.991 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.794 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.12% β-sheet: 0.00% Coil/Unstructured: 46.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00491	Arginase	7.48
PF13191	AAA_16	2.80
PF13601	HTH_34	1.87
PF08281	Sigma70_r4_2	1.87
PF00211	Guanylate_cyc	1.87
PF00589	Phage_integrase	0.93
PF00106	adh_short	0.93
PF08240	ADH_N	0.93
PF01988	VIT1	0.93
PF00196	GerE	0.93
PF00296	Bac_luciferase	0.93
PF07963	N_methyl	0.93
PF05147	LANC_like	0.93
PF01872	RibD_C	0.93
PF12681	Glyoxalase_2	0.93
PF04978	DUF664	0.93
PF00696	AA_kinase	0.93
PF00300	His_Phos_1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	7.48
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.87
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.93
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.93
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.93
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.93
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.93
COG4403	Lantibiotic modifying enzyme	Defense mechanisms [V]	0.93

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.44 %
Unclassified	root	N/A	20.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.44 %
Unclassified	root	N/A	20.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.44 %
Unclassified	root	N/A	20.56 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	67.29 %
Unclassified	root	N/A	20.56 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	47.66 %
Unclassified	root	N/A	20.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17.76 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	47.66 %
Unclassified	root	N/A	20.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.35 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	47.66 %
Unclassified	root	N/A	20.56 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.80 %
Bifidobacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales	0.93 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	47.66 %
Unclassified	root	N/A	20.56 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.80 %
Bifidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae	0.93 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	47.66 %
Unclassified	root	N/A	20.56 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1.87 %
Bifidobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium	0.93 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.93 %
Kibdelosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	47.66 %
Unclassified	root	N/A	20.56 %
Amycolatopsis taiwanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis taiwanensis	1.87 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.93 %
Kibdelosporangium banguiense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium banguiense	0.93 %
Bifidobacterium subtile	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium subtile	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FHA1B5K04XPQBS	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300000956\|JGI10216J12902_120325651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	903	Open in IMG/M
3300002495\|BRMGV_1004388	Not Available	769	Open in IMG/M
3300004633\|Ga0066395_10447826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	736	Open in IMG/M
3300004635\|Ga0062388_101689109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300005435\|Ga0070714_101427231	Not Available	676	Open in IMG/M
3300005437\|Ga0070710_10070328	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300005538\|Ga0070731_10574885	Not Available	750	Open in IMG/M
3300005598\|Ga0066706_10091431	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300005614\|Ga0068856_101430519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	706	Open in IMG/M
3300005764\|Ga0066903_100750933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1732	Open in IMG/M
3300005764\|Ga0066903_103969333	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300005764\|Ga0066903_104906505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	710	Open in IMG/M
3300006028\|Ga0070717_12136233	Not Available	504	Open in IMG/M
3300006034\|Ga0066656_10725327	Not Available	638	Open in IMG/M
3300006046\|Ga0066652_101180572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300006052\|Ga0075029_100601255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M
3300006059\|Ga0075017_100844819	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300006102\|Ga0075015_100597033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium subtile	646	Open in IMG/M
3300006797\|Ga0066659_11315550	Not Available	603	Open in IMG/M
3300009012\|Ga0066710_101222177	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300009520\|Ga0116214_1044069	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1614	Open in IMG/M
3300009672\|Ga0116215_1115655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1200	Open in IMG/M
3300010048\|Ga0126373_13325585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300010303\|Ga0134082_10249141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	736	Open in IMG/M
3300010358\|Ga0126370_10559057	Not Available	979	Open in IMG/M
3300010358\|Ga0126370_10943708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	783	Open in IMG/M
3300010396\|Ga0134126_10793150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1071	Open in IMG/M
3300012285\|Ga0137370_10895397	Not Available	549	Open in IMG/M
3300012356\|Ga0137371_10806120	Not Available	715	Open in IMG/M
3300012358\|Ga0137368_10763527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300012961\|Ga0164302_10051871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2041	Open in IMG/M
3300012971\|Ga0126369_12552838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300015374\|Ga0132255_100993747	Not Available	1258	Open in IMG/M
3300016294\|Ga0182041_10371413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1208	Open in IMG/M
3300016341\|Ga0182035_10547108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	994	Open in IMG/M
3300016357\|Ga0182032_11294793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	629	Open in IMG/M
3300016371\|Ga0182034_11015206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	717	Open in IMG/M
3300016387\|Ga0182040_10283308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1260	Open in IMG/M
3300016422\|Ga0182039_10563582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	992	Open in IMG/M
3300017944\|Ga0187786_10064827	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300017961\|Ga0187778_10285609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1065	Open in IMG/M
3300017961\|Ga0187778_10755307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium banguiense	661	Open in IMG/M
3300017973\|Ga0187780_10973873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	618	Open in IMG/M
3300017993\|Ga0187823_10379157	Not Available	510	Open in IMG/M
3300018007\|Ga0187805_10451953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	599	Open in IMG/M
3300018060\|Ga0187765_10715108	Not Available	659	Open in IMG/M
3300018064\|Ga0187773_10648514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	652	Open in IMG/M
3300018468\|Ga0066662_12869330	Not Available	512	Open in IMG/M
3300021377\|Ga0213874_10302633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300021560\|Ga0126371_11449520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	816	Open in IMG/M
3300022467\|Ga0224712_10280857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	775	Open in IMG/M
3300025917\|Ga0207660_10640710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	866	Open in IMG/M
3300025929\|Ga0207664_11967436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300025931\|Ga0207644_10351619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1197	Open in IMG/M
3300027696\|Ga0208696_1009477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4060	Open in IMG/M
3300027874\|Ga0209465_10628203	Not Available	530	Open in IMG/M
3300028281\|Ga0247689_1030930	Not Available	728	Open in IMG/M
3300031240\|Ga0265320_10337950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	666	Open in IMG/M
3300031543\|Ga0318516_10686188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300031544\|Ga0318534_10185022	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300031561\|Ga0318528_10395394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	742	Open in IMG/M
3300031564\|Ga0318573_10790245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300031668\|Ga0318542_10739843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300031680\|Ga0318574_10123165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1456	Open in IMG/M
3300031681\|Ga0318572_10514537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	713	Open in IMG/M
3300031682\|Ga0318560_10757838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	524	Open in IMG/M
3300031719\|Ga0306917_10475148	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300031723\|Ga0318493_10430448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	724	Open in IMG/M
3300031724\|Ga0318500_10553503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis taiwanensis	581	Open in IMG/M
3300031748\|Ga0318492_10247886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300031765\|Ga0318554_10226635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1064	Open in IMG/M
3300031771\|Ga0318546_10905367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	621	Open in IMG/M
3300031781\|Ga0318547_10792020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	590	Open in IMG/M
3300031792\|Ga0318529_10132417	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300031793\|Ga0318548_10354796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	720	Open in IMG/M
3300031795\|Ga0318557_10173231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	981	Open in IMG/M
3300031796\|Ga0318576_10208749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	919	Open in IMG/M
3300031798\|Ga0318523_10610333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300031805\|Ga0318497_10142525	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300031831\|Ga0318564_10002635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6305	Open in IMG/M
3300031833\|Ga0310917_10326266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1040	Open in IMG/M
3300031846\|Ga0318512_10046042	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300031879\|Ga0306919_10837150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	706	Open in IMG/M
3300031879\|Ga0306919_11334636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis taiwanensis	542	Open in IMG/M
3300031890\|Ga0306925_10153149	All Organisms → cellular organisms → Bacteria	2481	Open in IMG/M
3300031890\|Ga0306925_11946651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	557	Open in IMG/M
3300031893\|Ga0318536_10021871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2911	Open in IMG/M
3300031945\|Ga0310913_10454675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	909	Open in IMG/M
3300032008\|Ga0318562_10774148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300032009\|Ga0318563_10228518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1004	Open in IMG/M
3300032009\|Ga0318563_10261467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	935	Open in IMG/M
3300032039\|Ga0318559_10007285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3812	Open in IMG/M
3300032066\|Ga0318514_10164926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1153	Open in IMG/M
3300032067\|Ga0318524_10016385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3238	Open in IMG/M
3300032076\|Ga0306924_10089879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3455	Open in IMG/M
3300032091\|Ga0318577_10528872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300032094\|Ga0318540_10461633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	613	Open in IMG/M
3300032897\|Ga0335071_11286625	Not Available	676	Open in IMG/M
3300032955\|Ga0335076_10686569	Not Available	905	Open in IMG/M
3300033289\|Ga0310914_10203255	All Organisms → cellular organisms → Bacteria	1769	Open in IMG/M
3300033803\|Ga0314862_0162879	Not Available	545	Open in IMG/M
3300034124\|Ga0370483_0010712	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2589	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.33%
Host-Associated	Host-Associated	4.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.78%
Aquatic	Environmental → Aquatic	6.54%
Plants	Host-Associated → Plants	4.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.78%
Freshwater	Environmental → Aquatic → Freshwater	2.80%
Sediment	Environmental → Aquatic → Sediment	2.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%
Marine	Environmental → Aquatic → Marine	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.35%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Oil-Contaminated Sediment	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated Sediment	0.93%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Mangrove Soil	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated Sediment → Mangrove Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002495	454 Fosmid Sequence	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_01500940	2070309004	Green-Waste Compost	MQGTHETTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPSVRQQQAEGVADPGVVRPRQ
JGI10216J12902_1203256512	3300000956	Soil	MQGTPDIDQAARADDGDSLDPREAARLLAQSEREARRQFNLSPQWITAFMGAVILLAYGALWLSTRGQHPYKGPSLAVVALVYGAVALAIAASVKVYRRATAGVSGPPVRQQQVEGIAILVSFVLGSPVLQGAMKH
BRMGV_10043882	3300002495	Mangrove Soil	MQGTRDIHQTAGSDDGNGLDPREAARLLVQTEREAQRQFSLSPLWITAVMGAIVLVAYGALWFSTRAQHPYIGPSLGVVGLVYAVVAVAIAASVKVYRRATAGVRGLSVRQQQAEGV
Ga0066395_104478261	3300004633	Tropical Forest Soil	MEGSHDIDRTARADDGDGLDPREAARLLGQAEQEARRQFNLSPLWLTALMGAVILVAYGALWLSTRGQHPYNGPNLGVVALVYTAVAVAIAASVKVYRRATAGVGGPSVRQQQVEGIAILVSFVLG
Ga0062388_1016891091	3300004635	Bog Forest Soil	MQGKPDVEETTGANDAEELDPREAARLLAEAKREARRQFDLGPPWITAFGGGVILVAYGALWLSVRGQHPYAGPSLGVIALVYAAVAISIAVSAKVYRSATAGVKGPSLRQQRLEGVAILVSLILGGPVLQG
Ga0070714_1014272311	3300005435	Agricultural Soil	MQGTHDVHLTTTDDEGDRLDPREAARLLTQSEREARRQFNLSPHWINAVMGAVILVAYGSLWLSTRGQHLYRGPSPAVVALVYTAVAVALAVSVKVYRRATAGVRGPSVRQQQLEGIAILVSFVLGSPVLQGAMKHYRASDAIVYGVIPAA
Ga0070710_100703281	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTGDIDQSTEAVDEDALDPSEAARLLAQTEQEAQRQFDLSPLWITVVMGAVIFVAYGALWLSTRGQDPYRGPSIGVVGLVYAAVAIAITAAVKVYRRATAGVSGPSVRRQQVEGIAILVSFVLGSPVLQG
Ga0070731_105748852	3300005538	Surface Soil	LHHKANGGDSAKRGTHDIDESSTADHGEGLDPGEAARLLAQTERDAKRQFNFSPPWVTAFGGVVIAVSYGALWLSTRGQHPYGGPSAGALVLVYAAVVVSIAVSAKLYQRATVGVSGPSVRQQRAEGVAILASFVLGSPILQGAMKNAGASHAIVYG
Ga0066706_100914314	3300005598	Soil	MQGTHDVDQTARADDGDGLDPGEAARLLAQTEREARRQFNLSPQWINAVMGAVILVAYGSLWLSTRGQHPYKGPSLGVVALVYAAVAVAVAVSVKVYRRATAGVSG
Ga0068856_1014305191	3300005614	Corn Rhizosphere	VRLLAQTEREARRQFNLSPQWIDAVMGAVILVAYGSLWLSTRRQHPYTGPSLGVVALVYAAVAVALGVSVKVYRRATAGVSGPALRQQQAEGVAILVSFVLGSPVLQGAARHYGASDGIVYGVIPAAA
Ga0066903_1007509333	3300005764	Tropical Forest Soil	MQGAHDIDQAARADDGDGLDPRGAARLLARTEREAQRQFDLSPRWLTAVMGGVILVAYGALWLSTRGQHPYTGPSLGVVALVYAAVAVAIAASVKVYRRATAGVSGP
Ga0066903_1039693331	3300005764	Tropical Forest Soil	MQGTYDLGRSTGTDEGDGLDPREAARLLAETERDARRQFNLSPQWVNVVMGAVILIAYGSLWLSTRGQHPYTGPSLGVVALVYGAVAVAFAVSVKVYRRATAGVSGPAVTQQKAEGLAILASFVL
Ga0066903_1049065052	3300005764	Tropical Forest Soil	MQGTHETTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVALVYAAVAVAIAASVKVYRRATAGVSGPSVRQQQVEG
Ga0070717_121362331	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNGTHDADRATRAGDGDELDPREAAQLLAQTERDARRQFDLSPLWINAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVALVYTAVAVALAVSVKVYRRATAGVSGPAVRQQQAEGVAILVSFVLGSPVLQ
Ga0066656_107253272	3300006034	Soil	MQGTHDVDQTARADDGDGLDPGEAARLLAQTEREARRQFNLSPQWINAVMGAVILVAYGSLWLSTRGQHPYKGPSLGMVALVYAAVAVAIALSVTVYRRATAGVSGPSVRQQQLEGVAILVSFVLGSPVLQGALK
Ga0066652_1011805721	3300006046	Soil	MRGTHDVDQTTRADDGDGLDPREAARLLAQTERDARRQFNLSPQWINAVMGAVILVAYGSLWLSTRGQHPYKGPSLGVVALVYAAVAVAVAVSVKVYRRATAGVSGPSVRQQQLEGVAILVSFVLG
Ga0075029_1006012551	3300006052	Watersheds	MDGPHGNDQTTRADDGDGLDPREAARLLAQTEQEAQRQFNLSPLWITAVMGVVILLAYGALWLSTRGQHPYKGPSLGVVALVYAAVAVAIAVSVKVYRRATAGLSGPSVRQQQVEGVAILVSFVLGSPVLQGAMKHY
Ga0075017_1008448191	3300006059	Watersheds	MQGTHDTHETATANDGDRLDPQEAARLLAHTRRDAQRQFDLSPPWISVFMGAVILIAYGSLWVSTRGQHPYKGPSLGVVGLVYAAVAVSIAVSVRVYRRATAGVSGPSVRQQQVEGIAILVSFILGSPVLQGAMKHYGASDAIVY
Ga0075015_1005970331	3300006102	Watersheds	MNGEGQATEVVSTDDGDALDPREAARLLAQTEQEAQRQFNLSPLWITAVMGVVILVAYGALWLSTRGQHPYKGPSLGVVTLVYAAVAVAIAVSVKVYRRATAGLSGPSVRQQQVEGV
Ga0066659_113155502	3300006797	Soil	MQGTHDVDQTTRADDGDGLDPREAARLLAQTEREARRQFNLSPQWINAVMAAVILVAYGSLWLSTRGHHPYKGPSLGVVALVYAAVAVAFAVSMKVYRRATAGVSGPSTRQ
Ga0066710_1012221773	3300009012	Grasslands Soil	MQGTHDVDQTARADDGDGLDPGEAARLLAQSEREARRQFNLSPQWINAVMGAVILVAYGSLWLSTRGQHPYKGPSLGVVALVYAAVAVAVAVSVKVYRRASAGVSGPSVRQQ
Ga0116214_10440693	3300009520	Peatlands Soil	MQGTVDTHNTGTAGDGGPLGPREAARLLEETKREAKRQLSFSPPLIMAAMAILILVAYGALWLSTRGQHPYKGPSLGVVGLVYAAVAVSIAMSVKVLRPYWESRAAKPTGGSSAQHSPS*
Ga0116215_11156553	3300009672	Peatlands Soil	MQGTVDTHNTGTAGDGGPLGPREAARLLEETKREAKRQLSFSPPLIMAAMAILILVAYGALWLSTRGQHPYKGPSLGVVGLVYAAVAVSIAMSVKVLRPYWESRAAKPTGGSLAQHSPS*
Ga0126373_133255851	3300010048	Tropical Forest Soil	MQGTHETTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPSVRQQQLEGV
Ga0134082_102491411	3300010303	Grasslands Soil	MQGTHDVDQTTRADDGDGLDPREAARLLAQTEREARRQFNLSPQWINAVMGAVILVAYGSLWLSTRGQHPYKGPSLGVVALVYVAVAVAFAVSVKVYRRATAGVSGPAVRQQQVEGVAILVSFVLGSPVLQGALKHYGASDAIVYGVIPA
Ga0126370_105590571	3300010358	Tropical Forest Soil	MEGSHDIDRTARADDGDGLDPREAARLLGQAEQEARRQFNLSPLWLTALMGAVILVAYGALWLSTRGQHPYNGPNLGVVALVYTAVAVAIAASVKVYRRATAGVSGPPVRQQQIEGIAILVSFVLGSPVLQGAMKHYGASDAI
Ga0126370_109437081	3300010358	Tropical Forest Soil	VDGPHDIDQTTSSDGEGLDPREAARLLAQTEQEAQRQFNLSPLWITAVMGAVIFVAYGALWLSTRGQHPYQGPNLGVVALVYAAVAVAIAASVKVYRRATVGVSGPPVRQQQFEGVAILVSFVRGSPVLQGGMKHYGSSDAIVYGVIP
Ga0126379_120806971	3300010366	Tropical Forest Soil	MDGAHDIDRATGDSDGLDPKEAARLLTQTEKEARRQFNLSPLWITAVMGAVILVAYGALWLSTRGQDPYKGPSIGVVGLVYAAVAIAIAAAVKVYRRAASGVSGPSVRQQHVEGIAILVSFVLGSPVLQGAMRHYGASDTIVYGVIPAAAPLIIVGTTVLGIAASKADWPQFCAALAVVI
Ga0134128_122705371	3300010373	Terrestrial Soil	MWAMQGTHDIDEPSSAHDGDTLDPREAARLLTKTERDAKHQFDLSPPLLTVFMGVVILAGYAVLWLSVRGQHPYKGPSGGAIALVYAAVAVAIALTVKVYRRATAGVSGPNKRQQQVEGVAILISFIGSPILQGALRHYGASDALVYGVIPAAAPLIIVGTTVLGVAGSKEDWPQFGAALMVVIGGMIA
Ga0136449_1025479451	3300010379	Peatlands Soil	MQGTHDIDKPTTADDGEGLDPREAARLLAQTERDAKRQFNLSPPWTLAFGGAVIAVSYGALWLSTRGQHPYGGPSAGAIVLVYAAVAVSIAVSARVYRRATAGVSGPSVRQQQLEGVAILVSFVLGSPVLQGALKHYGASHAIVYGMIPAAVPLIIVGTTVLGIAASKADWPQFGAALAVVTG
Ga0134126_107931503	3300010396	Terrestrial Soil	MWAMQGTHDIDEPSSAHDGDTLDPREAARLLTKTERDAKHQFDLSPPLLTVFMGVVILAGYAVLWLSVRGQHPYKGPSGGAIALVYAAVAVAIALTVKVYRRATAGVSGPNKRQQQVEGVAILISFIGSPILQGALRHYGASDALVYGVIPAAAP
Ga0137370_108953971	3300012285	Vadose Zone Soil	MQGTHDVDQTTRADDGDGLDPREAALLLAQTEREARRQFHLSPQWINAVMGAVSLVAYGSLWLSTRGQHPYKGPSLGMVALVYAAVAVAIAVSVKVYRRATAGVSGPSVRQQQLEGVAILVSFVLGSPV
Ga0137371_108061202	3300012356	Vadose Zone Soil	MPGTRDTDQATRADDGDGLDPREAARLVAQTKREAQRQFNLSPPWITAVTGAVVLLAYGALWLSTRAQHPYKGPSLGVVALVYAAVAVAVAVSVKVYRRAPAGVSGPAVRQQQVEGVAILVSFVLGSPVLQGAMKHYAASDAI
Ga0137368_107635271	3300012358	Vadose Zone Soil	MQGTPDVDQTTRADGDGLDPREAARLFAQTEREARRQFNLSPQWINAVMGAVILVAYGSLWLSTRGQHPYKGPSLGVVALVYAAVAVAFAVSVKVYRRATTGVSGPSTRQQQVEGGAILVSFVLGSPVLQGALRHY
Ga0164302_100518713	3300012961	Soil	MNGTRDTSKMAPADPGGLDPREAARLLAETEREARRQFNLSPQWINVVMGAVILVAYGSLWLSTRGQHPYTGPSLGVVALVYAAVAVAFAVAVKVYRRATAGVSGPALLQQQAEGVAILVSFVLGSPVLQGAARHYGAS
Ga0126369_125528381	3300012971	Tropical Forest Soil	MQGTHETTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPSVRQ
Ga0132255_1009937471	3300015374	Arabidopsis Rhizosphere	MNGEGDAAEVVSTDDGDGLDPRDAARLLAQAERKARRQFNLNPLSITAVTGAVIFVAYGALWLSTRGQHPYQGPTLGVVALVYVAVAVAIAVSVKVYRRATPGVSGPAVRQQQAEGVAILVSFVLGSPVLQGALKHYGAGDAIVYGVIP
Ga0182041_103714131	3300016294	Soil	MEGPHDIGQSPRASDSDGLDPREAARLLAQTEREAQRQFNLSPMWITAVMGAVILVAYGALWLSTRGQHPYKGPNFGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQGAMKHYGASDAIVYGVIPAA
Ga0182035_105471083	3300016341	Soil	MDGPHDIDQSTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYNGPNLGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQGAMKHYGASDAIVYG
Ga0182032_112947931	3300016357	Soil	MDGPHDIDQSTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVALVYAAVAVAIAAAVKVYRRANAGVSGPPVRQQQLEGVAILVSFVLGSPVLQGAMKHYGASDAIVYGV
Ga0182034_110152061	3300016371	Soil	MQGTHESDETTSNEDAGELDPREAARLLDEASRHARRQFSLSPPWITVFGAVVVLVAYGALWLSTRGQAPYTGPSLGAIALVYAAVAVSVAVSVKVYRRATAGVRGPTRRQQTVEGVAILISYLG
Ga0182040_102833083	3300016387	Soil	MDGPHDIDQSTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYNGPNLGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQGAMKHYGASDAIVYGVIPAAA
Ga0182039_105635821	3300016422	Soil	MEGPHDIGQSPRAGDSDRLDPREAARMLAQTEREAQRQFNLSPMWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQGAMKHYGASDAIVYGVIPAAA
Ga0187786_100648271	3300017944	Tropical Peatland	MHRPHDDDELDPTEAARLLARTEREAQRQFDLSPQWVNAVMGAVILVAYGSLWLSTRGQHPYTGPSLGVIALVYVAVAVAFAVSVKVYRRATAGV
Ga0187778_102856092	3300017961	Tropical Peatland	MQGTHDIDKTTTANDDGDGLDPREAARLLEQTKREARRRFDLSPPWITVLMGAVILVAYGALWLSTRGQHPYKGPSLGVVGLVYAAVAVAIAVSVKVYRRATSGVSGPSIRRQKVEGVAILVSFLGS
Ga0187778_107553071	3300017961	Tropical Peatland	MQGTHDNDETTTDGDGEELDPREAAQLLAQTEREARRQFNLSPQWMNAVMGAVILVAYGSLWLSTRGQHPYKGPSLGGVALVYVGVVVALAVSVKVYRRATAGVSGPSVRQQQVEG
Ga0187780_109738731	3300017973	Tropical Peatland	MQGKHDIEETTEANDGEGLDPREAARLLAQTERDARRQFDLSPPWITVFGGGLILVAYGALWLSVRGQHPYTGPSLGVIALVYAAVAVSIAVSAKVYRRATAGVKGPSVRRQQLEGVAILVSFILGSPVLQ
Ga0187823_103791571	3300017993	Freshwater Sediment	MDGEGDATEAVSTDDGEGLDPREAARLLAETEREAQRQFDLNPLWITVVMSAIVLGAYGVLWFSTRGQHPYKGPSLGVVGLVYAAVAVTVAASVKVYRRATAGVSGPSVRQQQAEGVAIL
Ga0187805_104519531	3300018007	Freshwater Sediment	MQGTHDTDQTEPVDGGGELDPREAARLLDQTKRDARRQFDLSPPWITAFMGAVILVGYGALWLSTRGQHPYKGPSLGAIALIYTAIVVSIAVSVKVYRRATA
Ga0187765_107151081	3300018060	Tropical Peatland	MEATHDNHMATTDEHGDELDPREAARLLARTEREARRVFDVSPQWINALMGTLILVAYGSLWLSTRGQHPYEGPNLGVVALVYGAVAVAFAVSVKVFRRATAGVSGPSVRQQKVEGVAILVSFVLGSPVLQGALRHYGASNGIVYGVIPAA
Ga0187773_106485141	3300018064	Tropical Peatland	VDGPHDIDQTTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAAWVKVYRRATAGVSGPSVRQQQVEGVAILVSFVLGSPVLQGAMKHYRASDAIVYGVIPAA
Ga0066662_128693301	3300018468	Grasslands Soil	MQGTHDIDQTARADDGDGLDPREAARLLAQAEREARQQFNLSPQWVNGVMGAVILVAYGALWLSTRGQHPYKGPDLGVVALVYAAVAVALAVSVKVYRRARAGVSGPSVRQQQLEGVAILVSFVLGSPVLQGALKHYGASRAIVYGIIPAGAPLIIVGTTVLGIAA
Ga0213874_103026331	3300021377	Plant Roots	MQGTHDTDQSTTADDGNGLDPRDAARLLAQTKREAQRQFDLSPQWINVVMGAVILVAYGSLWLSTRGQHPYTGPNLGVVALVYAAVAVAIAVSVKVYRRATAGVSGPPVKQQQFEGVAILVSFVLGSPVLQGAMKHY
Ga0210389_106564761	3300021404	Soil	MNDTPDSEETQASDDDGFDPHDAARLLEEADSEARRQFSLSSPLVTVIGAGVILVAYGALWLSTRGQHPYTGPNLGVIALVYTAVAVAIAVSVRVYRRATAGVSGPAERQRKVEGVAILVSYIGSPVLQGALKHYGASPSIVYGMIPAAVPLIIVGTTVVAIGASKGDWPQFGAAL
Ga0126371_114495202	3300021560	Tropical Forest Soil	MQGTHETTRADDGDGLDPREAARLLAQTELEAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVALVYAAVAVAIAASVKVYRRATAGVSGPSVRQQQ
Ga0224712_102808571	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTHDIDEPSSAHDGDTLDPREAARLLTKTERDAKHQFDLSPPLLTVFMGVVILAGYAVLWLSVRGQHPYKGPSGGAIALVYAAVAVAIALTVKVYRRATAGVSGPNRRQQQVEGVAILISFI
Ga0207660_106407102	3300025917	Corn Rhizosphere	MNGTRDTSKMAPADPGGLDPREAARLLAETEREARRQFNLSPQWINVVMGAVILVAYGSLWLSTRGQHPYTGPSLGVVALVYAAVAVAFAVAVKVYRRATAGVSGPALRQQQAE
Ga0207664_119674361	3300025929	Agricultural Soil	MQGTGDIDQSTEAVDEDALDPSEAARLLAQTEQEAQRQFDLSPLWITVVMGAVIFVAYGALWLSTRGQDPYRGPSIGVVGLVYAAVAIAITAAVKVYRRATAGVSGPSVRR
Ga0207644_103516193	3300025931	Switchgrass Rhizosphere	VRLLAQTEREARRQFNLSPQWIDAVMGAVILVAYGSLWLSTRRQHPYTGPSLGVVALVYAAVAVALAVSVKVYRRATAGVSGPSVRRQQVEGVAI
Ga0208696_10094775	3300027696	Peatlands Soil	MQGTVDTHNTGTAGDGGPLGPREAARLLEETKREAKRQLSFSPPLIMAAMAILILVAYGALWLSTRGQHPYKGPSLGVVGLVYAAVAVSIAMSVKVLRPYWESRAAKPTGGSSAQHSPS
Ga0209465_106282031	3300027874	Tropical Forest Soil	MEGSHDIDRTARADDGDGLDPREAARLLGQAEQEARRQFNLSPLWLTALMGAVILVAYGALWLSTRGQHPYNGPNLGVVALVYTAVAVAIAASVKVYRRATAGVGGPSVRQQQVEGIAILVSF
Ga0247689_10309301	3300028281	Soil	VRLLAQTEREARRQFNLSPQWIDAVMGAVILVAYGSLWLSTRRQHPYTGPSLGVVALVYAAVAVALAVSVKVYRRATAGVS
Ga0265320_103379501	3300031240	Rhizosphere	MQGTHDVSQRTDDGDGLDPREAARLLAQTEREARRQFNLSPQWINGLMGAVILLAYGSLWLSTRGQHPYQGPNLGVVALVYTAVAVAFAVSVKVYRRATAGVSGPALRQQQVEGVAILISFVLGSPVLQGALRHSGASHAIVYGVI
Ga0318516_106861881	3300031543	Soil	MEGPHDIGQSPRASDSDGLDPREAARLLAQTEREAQRQFNLSPMWITAVMGAVILVAYGALWLSTRGQHPYKGPNFGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAIL
Ga0318534_101850221	3300031544	Soil	MDGPHDIDQTTRADDGDGLDPREAARLLAQTEREAQRQFDLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPPVRQQQLEGVAILVSFVLG
Ga0318528_103953943	3300031561	Soil	MDGPHDIDQTTRADDGDGLDPREAARLLAQTEREAQRQFDLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAASVKVYRRATAGVS
Ga0318573_107902451	3300031564	Soil	MQGTNDIDKTATANDRDGLDPREAAKLLAQAQRDAKREFSLSPPWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVGLAYAAVAVSIAVSVRVYQRATAGVSGPSVKQ
Ga0318542_107398431	3300031668	Soil	MQGTNDIDKTATANDRDGLDPREAAKLLAQAQRDAKREFSLSPPWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVGLVYAAVAVSIAVSVRVYQRATAGVSGPAVKQRQAEGIAILVSFIFGSPVL
Ga0318574_101231651	3300031680	Soil	MEGPHDIGQSPRASDSDGLDPREAARLLAQTEREAQRQFNLSPMWITAVMGAVILVAYGALWLSTRGQHPYKGPNFGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQGAMKHYGASDAIVYG
Ga0318572_105145372	3300031681	Soil	MDGPHDIDQSTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYNGPNLGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQGAMKH
Ga0318560_107578381	3300031682	Soil	MEGPHDIGQSPRASDSDGLDPREAARLLAQTEREAQRQFNLSPMWITAVMGAVILVAYGALWLSTRGQHPYKGPNFGVVALVYAAVAVAIAASVKVYRRATAGVS
Ga0306917_104751481	3300031719	Soil	MDGPHDIDQTTRADDGDGLDPREAARLLAQTEREAQRQFDLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPPVRQQQLEGVAILVSFVLGSPVLQ
Ga0318493_104304481	3300031723	Soil	MQGTHETTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPSVRQQQAEGVAILVSFVLGSPVL
Ga0318500_105535031	3300031724	Soil	MQGTHETRRADDGDGLDPREAARLLVQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTREQHPYKGPSLGVVALVYAAVAVAIAAAVTVYRRATAGVSGPSVRQQQAEGVAILVSFVLGSPVLQGAMKHYGASDAIVYG
Ga0318492_102478862	3300031748	Soil	MQGTHETRRADDGDGLDPREAARLLVQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVR
Ga0318554_102266351	3300031765	Soil	MQGTHETRRADDGDGLDPREAARLLVQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTREQHPYKGPSLGVVALVYAAVAVAIAAAVTVYRRATAGVSGPSVRQQQAEGVAILVSFVLGSPVLQGAMKH
Ga0318546_109053671	3300031771	Soil	MQGTNDIDKTATANDRDGLDPREAAKLLAQAQRDAKREFSLSPPWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVGLVYAAVAVSIAVSVRVYQRATAGVSGPSVKQRQAEGIAILVSFIFGSPVLQGAMKHYGASDAIV
Ga0318547_107920201	3300031781	Soil	MDGPHDIDQSTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYNGPNLGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQG
Ga0318529_101324171	3300031792	Soil	MDGPHDIDQTTRADDGDGLDPREAARLLAQTEREAQRQFDLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQA
Ga0318548_103547962	3300031793	Soil	MQGTHETTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPSVRQQQAEGVAILVSFVLGS
Ga0318557_101732311	3300031795	Soil	MQGTHESDETTSNEDAGELDPREAARLLDEASRHARRQFSLSPPWITVFGAVVVLVAYGALWLSTRGQDPYTGPSLGAIALVYAAVAVSVAVSVKVYRRATAGVRGPTRRQQTVEG
Ga0318576_102087491	3300031796	Soil	MEGPHDIGQSPRASDSDGLDPREAARLLAQTEREAQRQFNLSPMWITAVMGAVILVAYGALWLSTRGQHPYKGPNFGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQ
Ga0318523_106103331	3300031798	Soil	MQGTHDVGRSSGGDDGDGLDPHEAERLLAQTEREARRQFNLSPQWINVVMGAVILVAYGSLWLSTRGQHPYTGPSLGVVALVYAAVAVAFAVAVKVYRRATSGVTGPAVTQQKAEGLAILASFVLGSPVLQGALKHYGAGNALVYGVIPAAAPLIIVGTTALG
Ga0318497_101425251	3300031805	Soil	MDGPHDIDQTTRADDGDGLDPREAARLLAQTEREAQRQFDLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPPVRQQQLEGVA
Ga0318564_100026355	3300031831	Soil	MEGPHDIGQSPRASDSDGLDPREAARLLAQTEREAQRQFNLSPMWITAVMGAVILVAYGALWLSTRGQHPYKGPNFGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVL
Ga0310917_103262661	3300031833	Soil	MDGPHDIDQSTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYNGPNLGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQGAMKHY
Ga0318512_100460424	3300031846	Soil	MDGPHDIDQTTRADDGDGLDPREAARLLAQTEREARRQFDLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQA
Ga0306919_108371501	3300031879	Soil	MEGPHDIGQSPRASDSDGLDPREAARLLAQTEREAQRQFNLSPMWITAVMGAVILVAYGALWLSTRGQHPYKGPNFGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQGAMKHYG
Ga0306919_113346361	3300031879	Soil	MQGTHETRRADDGDGLDPREAARLLVQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTREQHPYKGPSLGVVALVYAAVAVAIAAAVTVYRRATAGVSGPSVRQQ
Ga0306925_101531491	3300031890	Soil	MDGPHDIDQSTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPSVRQQQAEGVAILVSFVLGSPVLQGAMKH
Ga0306925_119466511	3300031890	Soil	MQGTHQTTRAGDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPSLGVVALVYAAVAVAIAASVKVYRRATAGVSGPSVRQQQV
Ga0318536_100218712	3300031893	Soil	MEGPHDIGQSPRASDSDGLDPREAARLLAQTEREAQRQFNLSPMWITAVMGAVILVAYGALWLSTRGQHPYKGPNFGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQGAMKHYGASDAI
Ga0310913_104546753	3300031945	Soil	MDGPHDIDQSTRADDGDGLDPREAARLLAQTEREAQRQFNLSPLWITAVMGAVILVAYGALWLSTRGQHPYNGPNLGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAIL
Ga0318562_107741481	3300032008	Soil	MNGTLDNDQNTADDERSLDPREAAALIKQTETQAQRQFTLSPPWVTAVMGAVILVAYGALWLSTRGQHPYKGPSAGAIVLVYTAVAVSFAVLAKVYQRATAGVTGPSVRQQKVMGIAVAIAFLGSPVIQGAMKHYGASDAIVY
Ga0318563_102285182	3300032009	Soil	MDGPHDIDQTTRADDGDGLDPREAARLLAQTEREAQRQFDLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPPVRQQQLEGVAILVSFVLGSPVLQGAMKHYGASDAIVYG
Ga0318563_102614671	3300032009	Soil	MEGPHDIGQSPRASDSDGLDPREAARLLAQTEREAQRQFNLSPMWITAVMGAVILVAYGALWLSTRGQHPYKGPNFGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQQAEGVAILVSFVLGSPVLQGAMKHYGASDAIVYGVI
Ga0318559_100072851	3300032039	Soil	MDGPHDIDQTTRADDGDGLDPREAARLLAQTEREAQRHFDLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPPVRQQQLEGVAILVSFVLGSPVLQGAMK
Ga0318514_101649262	3300032066	Soil	MEGPHDIGQSPRASDSDGLDPREAARLLAQTEREAQRQFNLSPMWITAVMGAVILVAYGALWLSTRGQHPYKGPNFGVVALVYAAVAVAIAASVKVYRRATAGVSG
Ga0318524_100163855	3300032067	Soil	MDGPHDIDQTTRADDGDGLDPREAARLLAQTEREAQRHFDLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPPVR
Ga0306924_100898791	3300032076	Soil	MEGPHDIGQSPRAGDSDRLDPREAARMLAQTEREAQRQFNLSPMWITAVMGAVILVAYGALWLSTRGQHPYKGPNFGVVGLVYAAVAVAIAASVKVYRRATAGVSGPPVRQ
Ga0318577_105288721	3300032091	Soil	MQGTHESDETTSNEDAGELDPREAARLLDEASRHARRQFSLSPPWITVFGAVVVLVAYGALWLSTRGQDPYTGPSLGAIALVYAAVAVSVAVSVKGYRRATAGVRGPTRRQQTVEG
Ga0318540_104616332	3300032094	Soil	MDGPHDIDQTTRADDGDGLDPREAARLLAQTEREAQRQFDLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAAAVKVYRRATTPR
Ga0335071_112866252	3300032897	Soil	SSMDGPHHIDQTTRADDGDELDPREAARLLAHTEQEAQRQFNLNPLWITAVMGAVVLAAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAASVKVYRRATAGVSGPPVRQQAR
Ga0335076_106865691	3300032955	Soil	VQGTNDIDQPAKADDGDGLDPREAAQLLARTQREAQRQFDLSPAWLTVVTGAVVLVAYGALWLSTRGQHPYEGPSLGVVGLVYAGVAVAIAASVKIYRRATSGVRGP
Ga0310914_102032553	3300033289	Soil	MDGPHDIDQTTRADDGDGLDPREAARLLAQTEREARRQFDLSPLWITAVMGAVILVAYGALWLSTRGQHPYKGPNLGVVALVYAAVAVAIAAAVKVYRRATAGVSGPPVRQQQLEGVAILVSFVLG
Ga0314862_0162879_124_543	3300033803	Peatland	MTDDDSDGLDPREAARLLEQASREARHQFSLNPPWITAFGAVVVLVAYGALWLSTRGQHPYAGPSLGVIALVYAAVVVSIVVSAKVYRRATAGVTGATRRQQAVEGAAILLSYLGSAVLQGALKHHGAGDAIVYGMIPAA
Ga0370483_0010712_1_327	3300034124	Untreated Peat Soil	MLSFVPQSQRRSIVQGPHDIGDTTTDSDDDGLDPREAARLLAKAERDAKRQFNLSPPWIMVFGGAVILVAYGALWLSTRGQHPYTGPSLGVVALVYVAVIVAIAVSVKV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091661

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences