NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090845

Metagenome Family F090845

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090845
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 84 residues
Representative Sequence LIEKLTLEDEESSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Number of Associated Samples 82
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.86 %
% of genes near scaffold ends (potentially truncated) 93.52 %
% of genes from short scaffolds (< 2000 bps) 86.11 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (89.815 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere
(21.296 % of family members)
Environment Ontology (ENVO) Unclassified
(55.556 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.444 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.91%    β-sheet: 11.82%    Coil/Unstructured: 47.27%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF02502LacAB_rpiB 24.07
PF12681Glyoxalase_2 4.63
PF00903Glyoxalase 3.70
PF00464SHMT 3.70
PF07589PEP-CTERM 2.78
PF13650Asp_protease_2 1.85
PF06772LtrA 1.85
PF02660G3P_acyltransf 0.93
PF13410GST_C_2 0.93
PF13488Gly-zipper_Omp 0.93
PF00155Aminotran_1_2 0.93
PF02566OsmC 0.93
PF07238PilZ 0.93
PF00248Aldo_ket_red 0.93
PF07632DUF1593 0.93
PF04909Amidohydro_2 0.93
PF02643DUF192 0.93
PF08717CoV_NSP8 0.93
PF01266DAO 0.93
PF13231PMT_2 0.93
PF01544CorA 0.93
PF13537GATase_7 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0698Ribose 5-phosphate isomerase RpiBCarbohydrate transport and metabolism [G] 24.07
COG0112Glycine/serine hydroxymethyltransferaseAmino acid transport and metabolism [E] 3.70
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 3.70
COG4292Low temperature requirement protein LtrA (function unknown)Function unknown [S] 1.85
COG0344Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferaseLipid transport and metabolism [I] 0.93
COG0598Mg2+ and Co2+ transporter CorAInorganic ion transport and metabolism [P] 0.93
COG1430Uncharacterized conserved membrane protein, UPF0127 familyFunction unknown [S] 0.93
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 0.93
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.81 %
UnclassifiedrootN/A10.19 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2119805009|FNTS007_GKN1E7E02FTAETAll Organisms → cellular organisms → Bacteria501Open in IMG/M
3300000956|JGI10216J12902_102959259All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SM33981Open in IMG/M
3300000956|JGI10216J12902_120443129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. G1241599Open in IMG/M
3300004156|Ga0062589_101027941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas772Open in IMG/M
3300004156|Ga0062589_101122923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis745Open in IMG/M
3300004213|Ga0066648_10177254All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae1199Open in IMG/M
3300004463|Ga0063356_103512984All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae675Open in IMG/M
3300004479|Ga0062595_100185395All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis1265Open in IMG/M
3300005093|Ga0062594_100287523All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1238Open in IMG/M
3300005093|Ga0062594_102553298All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas562Open in IMG/M
3300005328|Ga0070676_10148498All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis1498Open in IMG/M
3300005329|Ga0070683_101512665All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300005331|Ga0070670_100103346All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis2454Open in IMG/M
3300005333|Ga0070677_10091624All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae1323Open in IMG/M
3300005333|Ga0070677_10922641All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas506Open in IMG/M
3300005339|Ga0070660_101217060All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas638Open in IMG/M
3300005347|Ga0070668_100242119All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1494Open in IMG/M
3300005353|Ga0070669_102011364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis505Open in IMG/M
3300005354|Ga0070675_102265596All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005355|Ga0070671_100039752All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae3905Open in IMG/M
3300005355|Ga0070671_101791101All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas545Open in IMG/M
3300005356|Ga0070674_100868182All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae784Open in IMG/M
3300005367|Ga0070667_100238045All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. NSE70-11625Open in IMG/M
3300005456|Ga0070678_101536657All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae624Open in IMG/M
3300005577|Ga0068857_101258380All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas717Open in IMG/M
3300005578|Ga0068854_100671839All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. NSE70-1891Open in IMG/M
3300005614|Ga0068856_101886034All Organisms → cellular organisms → Bacteria → Proteobacteria609Open in IMG/M
3300005618|Ga0068864_102131143All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas567Open in IMG/M
3300006061|Ga0081201_103104All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00572182Open in IMG/M
3300006169|Ga0082029_1230662All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae767Open in IMG/M
3300006178|Ga0075367_10604069All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae697Open in IMG/M
3300006624|Ga0101567_10127470All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae520Open in IMG/M
3300006954|Ga0079219_10215449All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300006954|Ga0079219_10282928All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae1013Open in IMG/M
3300006954|Ga0079219_12451142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas507Open in IMG/M
3300009094|Ga0111539_12806200Not Available564Open in IMG/M
3300009551|Ga0105238_10682664All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. NSE70-11038Open in IMG/M
3300010036|Ga0126305_10222116All Organisms → cellular organisms → Bacteria1205Open in IMG/M
3300010042|Ga0126314_10273526All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis1201Open in IMG/M
3300010044|Ga0126310_11383843All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis572Open in IMG/M
3300010375|Ga0105239_13570051Not Available505Open in IMG/M
3300012046|Ga0136634_10407738All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis568Open in IMG/M
3300012212|Ga0150985_109565734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis680Open in IMG/M
3300012960|Ga0164301_11557335All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis547Open in IMG/M
3300013102|Ga0157371_11182929All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300014326|Ga0157380_10474409All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1208Open in IMG/M
3300014326|Ga0157380_12638243All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas569Open in IMG/M
3300014497|Ga0182008_10772868All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis555Open in IMG/M
3300015371|Ga0132258_12247736All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1369Open in IMG/M
3300015373|Ga0132257_103162613Not Available600Open in IMG/M
3300018466|Ga0190268_10609854All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium776Open in IMG/M
3300018466|Ga0190268_11059935All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300018481|Ga0190271_12583282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis609Open in IMG/M
3300018920|Ga0190273_10040669All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae2279Open in IMG/M
3300025875|Ga0210040_10002130All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas28449Open in IMG/M
3300025907|Ga0207645_10135594All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis1603Open in IMG/M
3300025919|Ga0207657_10915058Not Available675Open in IMG/M
3300025920|Ga0207649_10099372All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1922Open in IMG/M
3300025930|Ga0207701_11690802All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. G124506Open in IMG/M
3300025931|Ga0207644_10004456All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00079092Open in IMG/M
3300025933|Ga0207706_11046605Not Available684Open in IMG/M
3300025944|Ga0207661_11314813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis664Open in IMG/M
3300025960|Ga0207651_10892538All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis791Open in IMG/M
3300025972|Ga0207668_10078870All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2380Open in IMG/M
3300025986|Ga0207658_10687459All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas924Open in IMG/M
3300028379|Ga0268266_10813898All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas902Open in IMG/M
3300028587|Ga0247828_10801230All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis597Open in IMG/M
3300028590|Ga0247823_10636165All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis803Open in IMG/M
3300028590|Ga0247823_10657817All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Kordiimonadales → Kordiimonadaceae → Kordiimonas → Kordiimonas aestuarii788Open in IMG/M
3300031547|Ga0310887_10527663All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300031548|Ga0307408_100386908Not Available1197Open in IMG/M
3300031824|Ga0307413_10014252All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas4029Open in IMG/M
3300031824|Ga0307413_11422459Not Available611Open in IMG/M
3300031847|Ga0310907_10377264All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis733Open in IMG/M
3300031852|Ga0307410_10101225All Organisms → cellular organisms → Bacteria2065Open in IMG/M
3300031852|Ga0307410_10267491All Organisms → cellular organisms → Bacteria1336Open in IMG/M
3300031852|Ga0307410_10615200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis907Open in IMG/M
3300031852|Ga0307410_10663057All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola876Open in IMG/M
3300031852|Ga0307410_10989356Not Available725Open in IMG/M
3300031854|Ga0310904_10941144All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas612Open in IMG/M
3300031901|Ga0307406_10109904All Organisms → cellular organisms → Bacteria → Proteobacteria1896Open in IMG/M
3300031903|Ga0307407_10644132All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300031908|Ga0310900_10635713All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas848Open in IMG/M
3300031908|Ga0310900_11904397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis507Open in IMG/M
3300031940|Ga0310901_10148495All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis896Open in IMG/M
3300031940|Ga0310901_10446521All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis571Open in IMG/M
3300031943|Ga0310885_10802770All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas534Open in IMG/M
3300031944|Ga0310884_10458202All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300031995|Ga0307409_100005643All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas7243Open in IMG/M
3300031995|Ga0307409_100041954All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas3422Open in IMG/M
3300031995|Ga0307409_100144464All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola2055Open in IMG/M
3300031995|Ga0307409_102864695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis510Open in IMG/M
3300032002|Ga0307416_101884761All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis701Open in IMG/M
3300032002|Ga0307416_102124809All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria663Open in IMG/M
3300032002|Ga0307416_103278559All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas542Open in IMG/M
3300032004|Ga0307414_11321121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis669Open in IMG/M
3300032004|Ga0307414_11902648All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis555Open in IMG/M
3300032005|Ga0307411_10510139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis1018Open in IMG/M
3300032005|Ga0307411_10947031All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis768Open in IMG/M
3300032012|Ga0310902_10115008All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis1465Open in IMG/M
3300032126|Ga0307415_100201316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis1580Open in IMG/M
3300032126|Ga0307415_100458861All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis1103Open in IMG/M
3300032179|Ga0310889_10116589All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis1158Open in IMG/M
3300034146|Ga0334964_111090All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis516Open in IMG/M
3300034175|Ga0334939_0240093All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomicrobium593Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere21.30%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil12.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere10.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere5.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere5.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.63%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.70%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.78%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.78%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater1.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.85%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.85%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.93%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil0.93%
BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust0.93%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.93%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.93%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.93%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.93%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.93%
Petroleum SedimentEngineered → Industrial Production → Engineered Product → Unclassified → Unclassified → Petroleum Sediment0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2119805009Soil microbial communities from sample at FACE Site NTS_007 Nevada Test SiteEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004213Groundwater microbial communities from aquifer - Crystal Geyser CG19_WC_8/21/14_NAEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300006061Microbial communities from petroleum pipeline sediment, Khambat, Gujarat, IndiaEngineeredOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006624Soil microbial communities from the Leymus chinensis steppe, China - after adding 1.75 g N m- 2, yr-1EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300012046Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300025875Groundwater microbial communities from aquifer - Crystal Geyser CG19_WC_8/21/14_NA (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300034146Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 60SNSEnvironmentalOpen in IMG/M
3300034175Biocrust microbial communities from Mojave Desert, California, United States - 35SMCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FNTS007_045395602119805009SoilSDGKRYNRQELDAIHEIVPSLAAALRVARGRYSRESLMQQQLDEMAARLRQLEGGAAKPA
JGI10216J12902_10295925923300000956SoilSVGTLLIGRRSDGNRYNKQEIEAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGTPKPA*
JGI10216J12902_12044312913300000956SoilDESSVGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRYSRESAMQQRMEEMAARLAQLEGGAPKPA*
Ga0062589_10102794113300004156SoilKLTLEDEESSVGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRYSRESAMQQRMEEMAARLAQLEGGAPKPA*
Ga0062589_10112292323300004156SoilPRLIERLTLADEETSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVSRGRFSRDSSMQQKLDEMAARLAQLEGGAPKPA*
Ga0066648_1017725433300004213GroundwaterSRSLGIIDEAVHPAAAAVVMDLPHGRELVAARGVRSERDPKLIEAIDLADEEGSVGRLLLGRRSDGNRYNRQELEAVRQLVPHVADALRVAGHRHSRESQLQQQIEAMAARLAQLESGAPKPA*
Ga0063356_10351298423300004463Arabidopsis Thaliana RhizosphereDDRKLIEKLTLEDEETSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA*
Ga0062595_10018539533300004479SoilNASAIVLDTAMSQELIAAREVNSADDPRLIERLTLADEETSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVSRGRFSRDSSMQQKLDEMAARLAQLEGGAPKPA*
Ga0062594_10028752333300005093SoilRDAESAADPKLIEHLVLADEESSVGTLLIGRRSDGNRYNRQELEAVRELIPNLADALRVARSRHSRESVLQQRIEEMAARLAQIEGGRPKPA*
Ga0062594_10255329813300005093SoilEESSVGTLLIGRRSDGNRYNRQELEAVQEMIPHLADALRVARSRHSRESVLQQRIDEMAARLAQIEGGQPKPA*
Ga0070676_1014849823300005328Miscanthus RhizosphereIVLDTAMSQELIAAREVNSADDPRLIERLTLADEETSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVSRGRFSRDSSMQQKLDEMAARLAQLEGGAPKPA*
Ga0070683_10151266523300005329Corn RhizospherePKLIEKLVLEDEESSVGVLLIGRRSDGNRYNRQEIDAIREIIPSLAEALRVARGRYSRDNMMQQRLDEMAARLAQLEGGAAKPA*
Ga0070670_10010334633300005331Switchgrass RhizosphereSADDPRLIERLTLADEETSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVSRGRFSRDSSMQQKLDEMAARLAQLEGGAPKPA*
Ga0070677_1009162433300005333Miscanthus RhizosphereLIAAREVTSAEDPQLIEKLVLEDEESSVGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQQLQEMAARLAQLEGGSPKPA*
Ga0070677_1092264123300005333Miscanthus RhizosphereATGRDLLASRDAESAADPKLIEHLVLADEESSVGTLLIGRRSDGNRYNRQELEAVRELIPNLADALRVARSRHSRESVLQQRIEEMAARLAQIEGGRPKPA*
Ga0070660_10121706023300005339Corn RhizosphereASRDAESAADPKLIEHLVLADEESSVGTLLIGRRSDGNRYNRQELEAVRELIPNLADALRVARSRHSRESVLQQRIEEMAARLAQIEGGRPKPA*
Ga0070661_10053781833300005344Corn RhizosphereLGRRSDRNRYSRKQLEAVEELIPSLAEALRIARSHHSRESVMQRRLDEMAARLAQLEGGGPRPEPA*
Ga0070668_10024211943300005347Switchgrass RhizosphereGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQQLQEMAARLAQLEGGSPKPA*
Ga0070669_10201136413300005353Switchgrass RhizosphereDTAMGQELIAARGVTSAEDPKLIEKLVLEDEESSVGVLLIGRRSDGNRYNRQEIDAIREIIPSLAEALRVARGRYSRDNMMQQRLDEMAARLAQLEGGAAKPA*
Ga0070675_10226559613300005354Miscanthus RhizosphereIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQQLQEMAARLAQLEGGSPKPA*
Ga0070671_10003975233300005355Switchgrass RhizosphereVTSADDPKLIEKLTLEDEESSVGTLLIGRRSDGNRYNKQEIEAIREIVPSLAEALRVARGRFSRESAMQQQLEQMAARLAQLEGGTPKPA*
Ga0070671_10179110123300005355Switchgrass RhizosphereDDPHLIERVAIADEESPVGELLLGRRSDGNRYNREQMEALKALMPSLAEALRVARSHHSRESEMQQRLDEMAARLAQLEGGTPKPA*
Ga0070674_10086818223300005356Miscanthus RhizosphereTSREMIAARAAESEEDSRLIERLPLVDDEGSIGELLIGRRSDGNRYNRQELEAIREIIPSLADALRVARGRYSRENMMQQRLDEMAARLAQLEGGAAKPA*
Ga0070667_10023804513300005367Switchgrass RhizosphereRRSDGNRYNRQEIDAIREIIPSLAEALRVARGRYSRDNMMQQRLDEMAARLAQLEGGAAKPA*
Ga0070678_10153665723300005456Miscanthus RhizosphereREVTSAEDPQLIEKLVLEDEESSVGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQQLQEMAARLAQLEGGSPKPA*
Ga0068857_10125838013300005577Corn RhizosphereEVTSADDTKLIERLTLEDEESSVGTLLIGRRSDGNRYNRQEIEAIREIIPSLAEALRFARGRFSRESAMQQQLQEMAARLAQLEGGAPKPA*
Ga0068854_10067183913300005578Corn RhizosphereNRYNRQEIDAIREIIPSLAEALRVARGRYSRDNMMQQRLDEMAARLAQLEGGAAKPA*
Ga0068856_10188603423300005614Corn RhizosphereLGRRSDRNRYNRQQLEAVEELIPSLAEALRIARSHHSRENEMQRRHEEMAARLAQLEGGGPKPKPV*
Ga0068864_10213114323300005618Switchgrass RhizosphereSSVGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQQLQEMAARLAQLEGGSPKPA*
Ga0068851_1111643123300005834Corn RhizosphereDRNRYNRQQLEAVEELIPSLAEALRIARSHHSRENEMQRRLEEMAARLAQLEGGGPKPKPV*
Ga0081201_10310413300006061Petroleum SedimentPAASAIVLDTAMGLELIAARGEVASPDDPRLIEKLVLEDEESSVGTLLIGRRSDGNRYNRQEMDAIREIIPSLAEALRVARGRFSRESAMHQRMEEMAARLAQLEGGTPKPA*
Ga0082029_123066223300006169Termite NestSAIVLDTALSQELIAAREVTSAEDPRLIERLTLEDEESSVGTLLLGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRYSRENMMQQRLDEMAARLAQLEGGAPRPA*
Ga0075367_1060406923300006178Populus EndosphereAESEEDSRLIERLPLADDEGSIGMLLIGRRSDGNRYNRQELEAIREIIPSLADSLRVARGRYSRENMMQQRLDEMAQRLAQLEGGAPKPA*
Ga0101567_1012747013300006624SoilAIVLDTALSQDLIAAREVTSAEDPRLIERLTLEDEESSVGTLLLGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRYSRENMMQQRLDEMAARLAQLEGGEPKPA*
Ga0079219_1021544933300006954Agricultural SoilVGTLLLGRRSDGNRYNRQQLEAVEELIPSLAEALRVARSHQARESGMQQRLDEMAARLAQLEGGAPKPA*
Ga0079219_1028292813300006954Agricultural SoilDEESSVGTLLIGRRSDGNRYNRQQLDAVHQLIPSLAEALRVARSHHSRESEMQQRLDEMAARLAQLEGGAPKPA*
Ga0079219_1245114223300006954Agricultural SoilNATSEDDPELVEQLTLADEESSVGTLLLGRRSDGNRYNRQQLEAVEELIPSLAEALRVARSHQARESGMQQRLDEMAARLAQLEGGAPKPA*
Ga0111539_1280620013300009094Populus RhizosphereHLVLADEESSVGTLLIGRRSDGNRYNRQELEAVRELIPNLADALRVARSRHSRESVLQQRIEEMAARLAQIEGGRPKPA*
Ga0105238_1068266413300009551Corn RhizospherePKLIEKLVLEDEESSVGVLLIGRRSDGNRYNRQEIDAIREIIPSLAVALRVARGRYSRDNMMQQRLDEMAARLAQLEGGAAKPA*
Ga0126305_1022211613300010036Serpentine SoilVTLADEETSVGTLLIGRRSGGHRYSKQELDAIQEIVPSLAEALRVSRGRCSRDSQMQERLDEVAARLAQLEGGAARPL*
Ga0126314_1027352613300010042Serpentine SoilLDTALREELIAVRGASSADDPRLIERVTLADEETSVGSLLIGRRSGGHRYSKQELDAIQEIVPSLAEALRVSRGRYSRDSQMQERLHE
Ga0126310_1138384313300010044Serpentine SoilEETSVGTLLIGRRSGGHRYSKQELDAIQEIVPSLAEALRVSRGRYSRDSQMQERLDEMAARLAQLEGGAARPL*
Ga0105239_1357005123300010375Corn RhizosphereRSDGNRYNREQMEALQTLMPSLAEALRVARSHHSRESEMQHRLDEMAARLAQLEGGTPNPA*
Ga0136634_1040773813300012046Polar Desert SandAITLDLQPDCETAVCRNVSSATDPRLIERLALADEGSPVGSLLIGRRSDGNRYNRQELKAIQQLVPYLAEALRVARGRLSREDMMQRRLDEMAARLAQIEGAAPKPA*
Ga0150985_10956573423300012212Avena Fatua RhizosphereLEDDESPVGVLLLGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRYSRDNMMQQRLDEMAARLAQLEGGAPKPA*
Ga0164301_1155733523300012960SoilALSHELIAARDVSSASDPRLVERLTLADEDSSVGTLLLGRRSDGNRYNRIELEAVQEIIPPLAQALRVARSRYSRENMMQERLDQMAARLAQLEGGAPKPA*
Ga0157371_1118292913300013102Corn RhizosphereSSEDPQLIEKLVLEDEESSVGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQQLQEMAARLAQLEGGSPKPA*
Ga0157380_1047440913300014326Switchgrass RhizosphereAREVTGSEDPQLIGKLLLEDEGSSVGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQQLQEMAARLAQLEGGSPKPA*
Ga0157380_1263824313300014326Switchgrass RhizospherePVGVLLLGRRSDGNRYNRQELEAIREIIPALAEALRVARGRHSRESMMQQQLEEMATRLAQLEGGAPKPA*
Ga0182008_1077286823300014497RhizosphereLSRELIAARDVSSADDPELVERLSLTDEEGPVGTLLLGRRSDRNRYSRQQLEAVEELVPALTEALRIARSHHSRASDMQQRLDEMAARLAQLEGGAEPKPA*
Ga0132258_1224773613300015371Arabidopsis RhizosphereDPKLVEKLVLEDEESSVGMLLIGRRSDGNRYNRQEIDAIREIIPSLAEALRVARGRYSRDNMMQQRLDEMAARLAQLEGGAPKPV*
Ga0132257_10316261313300015373Arabidopsis RhizosphereERLVLADEESRVGTLLIGRRSDGNRYNRQELEAVQELIPHLADALRVARSRHSRESDLQQRLEEMAARLAQIEGGQPKPA*
Ga0190268_1060985433300018466SoilVGRRSDGNRYNRQELDAIQEIVPSLAAALRVSRGRYSRESLMQQQLDEMAARLQQLEGSVAKPA
Ga0190268_1105993513300018466SoilSDGNRYNRQEREAIREIIPSLAEALRVSRGRFSRESAMQQRMEEMAARLAQLEGGTPKPA
Ga0190271_1258328223300018481SoilSAADPKLIEKLTLEDEESSVVTLLIGRRSDGNRYNRQEIDAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0190273_1004066933300018920SoilSAADPKLIEKLTLEDEESSVGILFIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0210040_10002130333300025875GroundwaterMQSPADRRVHDRLLLEDEEGPVGRLLLGRRSDGNRYNSQELKAVRELVPNLADALRVARSRHSRESVLQQQLEAMAARLAQLEGGAPKPA
Ga0207645_1013559413300025907Miscanthus RhizosphereTAMSQELIAAREVNSADDPRLIERLTLADEETSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVSRGRFSRDSSMQQKLDEMAARLAQLEGGAPKPA
Ga0207657_1091505823300025919Corn RhizosphereASRDAESAADPKLIEHLVLADEESSVGTLLIGRRSDGNRYNRQELEAVRELIPNLADALRVARSRHSRESVLQQRIEEMAARLAQIEGGRPKPA
Ga0207649_1009937213300025920Corn RhizosphereTAMGQELIAARGVTSAEDPKLIEKLVLEDEESSVGVLLIGRRSDGNRYNRQEIDAIREIIPSLAEALRVARGRYSRDNMMQQRLDEMAARLAQLEGGAAKPA
Ga0207649_1052944813300025920Corn RhizosphereLGRRSDRNRYSRKQLEAVEELIPSLAEALRIARSHHSRESVMQRRLDEMAARLAQLEGGGPRPEPA
Ga0207701_1169080223300025930Corn, Switchgrass And Miscanthus RhizosphereLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRYSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0207644_10004456113300025931Switchgrass RhizosphereAARNASSADDPHLIERLAIADEESPVGVLLLGRRSDGNRYNREQMEALQTLMPSLAEALRVARSHHSRESEMQHRLDEMAARLAQLEGGTPNPA
Ga0207706_1104660523300025933Corn RhizosphereVGTLLLGRRSDGNRYNRQQFEAIEELIPALAEALRIARSHHSRESVMQQRLDEMAARLAQLEGGGAPKPA
Ga0207661_1131481323300025944Corn RhizosphereVTSAEDPKLIEKLVLEDEESSVGVLLIGRRSDGNRYNRQEIDAIREIIPSLAEALRVARGRYSRDNMMQQRLDEMAARLAQLEGGAAKPA
Ga0207651_1089253813300025960Switchgrass RhizosphereAARGVTSAEDPKLIEKLVLEDEESSVGVLLIGRRSDGNRYNRQEIDAIREIIPSLAEALRVARGRYSRDNMMQQRLDEMAARLAQLEGGAAKPA
Ga0207668_1007887013300025972Switchgrass RhizosphereLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQQLQEMAARLAQLEGGSPKPA
Ga0207658_1068745913300025986Switchgrass RhizosphereSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQQLQEMAARLAQLEGGSPKPA
Ga0268266_1081389823300028379Switchgrass RhizosphereSDGNRYNRQELEAIREIIPSLADALRVARGRYSRENMMQQRLDEMAARLAQLEGGAAPNP
Ga0247828_1080123023300028587SoilDPKLIEELTLEDEESSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRFSRETAMQQRMEEMAARLAQLEGGAPKTA
Ga0247823_1063616513300028590SoilIVLDTAMGHELIAAREVTSADDPKLIEKLTLEDEESSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRFSRETAMQQRMEEMAARLAQLEGGAPKPA
Ga0247823_1065781713300028590SoilAMGHQLIAAREVTSAEDSKLVEKLTLEDEESSVGTLLMGRRSDGNRYNRQEIDAVREIIPSLAEALRVARGRFSRESAMHQKMEEMAARLAQLEGGTPKPA
Ga0310887_1052766313300031547SoilIEKLVLEDEESSVGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQQLQEMAARLAQLEGGSPKPA
Ga0307408_10038690813300031548RhizosphereLADDETSVGTLPIGRRSDGNRYNPQELEAMREIIPSLAEALRVSRGRFSRVSAMQQRMEEMAARLAQLEG
Ga0307413_1001425253300031824RhizosphereTLEDEESSVGTLFIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0307413_1142245913300031824RhizosphereSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGASKPA
Ga0310907_1037726413300031847SoilRSDGNRYNRQELEAIREIIPSLAEALRVSRGRFSRDSSMQQKLDEMAARLAQLEGGAPKP
Ga0307410_1010122513300031852RhizosphereSREATSADDPRLVEQLTLADEETSVGTLLIGRRSDGNRYNRQELEAIRQIVPSLAEALRVSRGRYSRESLMQQRLDDMAAKLALLEQGTPKPA
Ga0307410_1026749123300031852RhizosphereLIEKLTLEDEESSVGTLLIGRRSDGNRYNRQEIDAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0307410_1061520013300031852RhizosphereVLDTAMGHELIAAREVTSAADPKLIEKLTLEDEESSVGTLFIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0307410_1066305723300031852RhizosphereLIEKLTLEDEESSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0307410_1098935613300031852RhizosphereEESSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVARSRFSRESDMQQRLEEMAARLAQLEGGSPKPA
Ga0310904_1094114413300031854SoilSILLADEESSVGKLLLGRRSDGNRYNRQELEAVRELVPNLAEALRVARGRHSRETVMQQKLEEMAARLAQLEGGSPKPA
Ga0307406_1010990413300031901RhizosphereAREVTSAADPKLIEKLTLEDEESSVGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0307407_1064413223300031903RhizosphereLEDDETSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVSRGRFSRVSAMQQRMEEMAARLAQLEGGAPKPA
Ga0310900_1063571323300031908SoilVRGTDSADDRRLIESILLADEESSVGKLLLGRRSDGNRYNRQELEAVRELVPNLAEALRVARGRHSRETVMQQKLEQMAARLAQLEGGSPKPA
Ga0310900_1190439723300031908SoilSHSPQLLAARGTDSADDRRLIESIVLADEESSVGKLLLGRRSDGNRYNRQELEAVRELVPHLAEALRVARGRHSRETVMQQQLEAMAARIAQLEGGSPKPA
Ga0310901_1014849513300031940SoilLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVSRGRFSRDSSMQQKLDEMAARLAQLEGGAPKPA
Ga0310901_1044652123300031940SoilVTSSEDPQLIEKLVLEDEEGSVGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQQLQEMAARLAQLEGGSPKPA
Ga0310885_1080277023300031943SoilGKLLLGRRSDGNRYNRQELEAVRELVPNLAEALRVARGRHSRETVMQQKLEEMAARLAQLEGGSPKPA
Ga0310884_1045820213300031944SoilDEESSVGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQQLQEMAARLAQLEGGSPKPA
Ga0307409_100005643123300031995RhizosphereGEVTSADDPRLIEKLVLEDEESSVGTLLIGRRSDGNRYNRQEIDAIREIIPSLAEALRVARGRFSRESAMHQKMEEMAARLAQLEGGTPKPA
Ga0307409_10004195423300031995RhizosphereLADDETSVGTLPIGRRSDGNRYNPQELEAMREIIPSLAEALRVSRGRFSRVSAMQQRMEEMAARLAQLEGGAPKPA
Ga0307409_10014446433300031995RhizosphereDTAMGHELIAARDVSSADDPKLIEKLTLEDEESSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0307409_10286469523300031995RhizosphereGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0307416_10188476113300032002RhizosphereASAIVLDTAMGHELIAAREVTSADDPKLIEKLTLEDEESSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0307416_10212480913300032002RhizosphereLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0307416_10327855913300032002RhizosphereREVTSADDPRLVEKLTLADEESSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRFSRESLMQQRLDEMAARLAQLEGGAPKPA
Ga0307414_1132112113300032004RhizosphereDEESSVGTLLIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0307414_1190264813300032004RhizosphereVLDTPHGTELVAAREVQSANDPKLVESLPLADEEGPVGTLRLGRRSDGNRYNRQELEAVRQIIPHLADALRVARGRYSREAMLQQQMEAMAARLAQLEGGAPKPA
Ga0307411_1051013913300032005RhizosphereAIVLDTAMGHELIAAREVTSAADPKLIEKLTLEDEESSVGTLFIGRRSDGNRYNKQEIDAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0307411_1094703113300032005RhizosphereLIGRRSDGNRYNRQELEAIREIIPSLAEALRVARGRFSRESAMQQRMEEMAARLAQLEGGAPKPA
Ga0310902_1011500823300032012SoilIVLDTAMSQELIAAREVNSADDPRLIERLTLADEETSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVSRGRFSRDSSMQQKLDEMAARLAQLEGGAPKPA
Ga0307415_10020131623300032126RhizosphereAIVLDTAKTHELIAALEVVSAEDPRLIEKLTLADDETSVGTLPIGRRSDGNRYNPQELEAMREIIPSLAEALRVSRGRFSRVSAMQQRMEEMAARLAQLEGGAPKPA
Ga0307415_10045886113300032126RhizosphereLADEETSVGTLLIGRRSDGNRYNRQELEAIRQIVPSLAEALRVSRGRYSRESLMQQRLDDMAAKLALLEQGTPKPA
Ga0310889_1011658923300032179SoilSVGTLLIGRRSDGNRYNRQELEAIREIIPSLAEALRVSRGRFSRDSSMQQKLDEMAARLAQLEGGAPKPA
Ga0334964_111090_243_5153300034146Sub-Biocrust SoilATAADDPRFIERVTLADEETSVGTLLLGRRSDGKRYNKLELDAVREIVPSLAAALRVSRGRFSRDSQMQQRLDEMAARLAQLEGGTPRLA
Ga0334939_0240093_357_5933300034175BiocrustILLADEETSVGTLLVGRRADGNRYNRQELDAIEEIVPSLAAALRVSRGRYSRESLMQQQLDEMAARLRQLEGGAVKPA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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