Metagenome Family F088474

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088474
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	81 residues
Representative Sequence	MELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSAVKLRH
Number of Associated Samples	71
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.81 %
% of genes near scaffold ends (potentially truncated)	35.78 %
% of genes from short scaffolds (< 2000 bps)	83.49 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.147 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (22.936 % of family members)
Environment Ontology (ENVO)	Unclassified (28.440 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.376 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.82% β-sheet: 31.78% Coil/Unstructured: 51.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF07589	PEP-CTERM	10.09
PF13683	rve_3	3.67
PF12902	Ferritin-like	2.75
PF03372	Exo_endo_phos	1.83
PF07769	PsiF_repeat	1.83
PF02518	HATPase_c	1.83
PF09349	OHCU_decarbox	1.83
PF08305	NPCBM	0.92
PF03364	Polyketide_cyc	0.92
PF04430	DUF498	0.92
PF13699	DUF4157	0.92
PF06983	3-dmu-9_3-mt	0.92
PF01522	Polysacc_deac_1	0.92
PF00011	HSP20	0.92
PF06078	DUF937	0.92
PF00144	Beta-lactamase	0.92
PF01161	PBP	0.92
PF00408	PGM_PMM_IV	0.92
PF00413	Peptidase_M10	0.92
PF00753	Lactamase_B	0.92
PF00781	DAGK_cat	0.92
PF13676	TIR_2	0.92
PF01476	LysM	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.83
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.92
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.92
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.92
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.92
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.92
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.92
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.92
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.92
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.92
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.92
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.92
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.92
COG5549	Predicted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.15 %
Unclassified	root	N/A	23.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.15 %
Unclassified	root	N/A	23.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.15 %
Unclassified	root	N/A	23.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.20 %
Unclassified	root	N/A	23.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.18 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	42.20 %
Unclassified	root	N/A	23.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.01 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.92 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.20 %
Unclassified	root	N/A	23.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	8.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.75 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.92 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.20 %
Unclassified	root	N/A	23.85 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	8.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.75 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.92 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.92 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.92 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.20 %
Unclassified	root	N/A	23.85 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	8.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.92 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.92 %
Candidatus Scalinduaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae	0.92 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.20 %
Unclassified	root	N/A	23.85 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	8.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.75 %
Bacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus	0.92 %
Candidatus Scalindua	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua	0.92 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.92 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.20 %
Unclassified	root	N/A	23.85 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	8.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.75 %
Bacillus subtilis group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group	0.92 %
Candidatus Scalindua rubra	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua → Candidatus Scalindua rubra	0.92 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.92 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.20 %
Unclassified	root	N/A	23.85 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	8.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.75 %
Bacillus subtilis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus subtilis	0.92 %
Candidatus Scalindua rubra	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua → Candidatus Scalindua rubra	0.92 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.92 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_342655_length_1158_cov_5.264249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1190	Open in IMG/M
3300000559\|F14TC_104899755	Not Available	518	Open in IMG/M
3300000881\|JGI10215J12807_1091729	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300000881\|JGI10215J12807_1184213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300000891\|JGI10214J12806_10837810	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua → Candidatus Scalindua rubra	757	Open in IMG/M
3300003371\|JGI26145J50221_1014174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300004114\|Ga0062593_102200646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300004157\|Ga0062590_100483353	Not Available	1049	Open in IMG/M
3300004157\|Ga0062590_101388945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300004463\|Ga0063356_101080734	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300004463\|Ga0063356_101989719	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300004463\|Ga0063356_104968708	Not Available	571	Open in IMG/M
3300004480\|Ga0062592_101778598	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005093\|Ga0062594_100514845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300005295\|Ga0065707_10157220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1593	Open in IMG/M
3300005328\|Ga0070676_10963507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300005333\|Ga0070677_10327238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300005356\|Ga0070674_100082651	Not Available	2298	Open in IMG/M
3300005406\|Ga0070703_10214344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300005441\|Ga0070700_100288981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1192	Open in IMG/M
3300005458\|Ga0070681_10392395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1299	Open in IMG/M
3300005530\|Ga0070679_101236923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300006844\|Ga0075428_100042986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	4968	Open in IMG/M
3300006844\|Ga0075428_100045795	Not Available	4806	Open in IMG/M
3300006844\|Ga0075428_100555158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1228	Open in IMG/M
3300006844\|Ga0075428_100762624	All Organisms → cellular organisms → Bacteria → Proteobacteria	1029	Open in IMG/M
3300006844\|Ga0075428_100842311	Not Available	974	Open in IMG/M
3300006844\|Ga0075428_102179992	Not Available	572	Open in IMG/M
3300006845\|Ga0075421_100062925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4684	Open in IMG/M
3300006845\|Ga0075421_100231001	All Organisms → cellular organisms → Bacteria	2275	Open in IMG/M
3300006845\|Ga0075421_100357098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1764	Open in IMG/M
3300006845\|Ga0075421_101226110	Not Available	835	Open in IMG/M
3300006846\|Ga0075430_100103474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2377	Open in IMG/M
3300006846\|Ga0075430_100198906	All Organisms → cellular organisms → Bacteria → Proteobacteria	1664	Open in IMG/M
3300006846\|Ga0075430_100408580	Not Available	1120	Open in IMG/M
3300006846\|Ga0075430_101060388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300006846\|Ga0075430_101644742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus subtilis	527	Open in IMG/M
3300006853\|Ga0075420_100235308	Not Available	1594	Open in IMG/M
3300006876\|Ga0079217_10086590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1371	Open in IMG/M
3300006876\|Ga0079217_10131615	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300006894\|Ga0079215_10078689	Not Available	1383	Open in IMG/M
3300006894\|Ga0079215_10376403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	826	Open in IMG/M
3300006894\|Ga0079215_10831679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300006918\|Ga0079216_10183687	Not Available	1128	Open in IMG/M
3300006969\|Ga0075419_11280160	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300006969\|Ga0075419_11388559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300007004\|Ga0079218_10005054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	5794	Open in IMG/M
3300007004\|Ga0079218_10174648	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300007004\|Ga0079218_12590857	Not Available	602	Open in IMG/M
3300007004\|Ga0079218_12732831	Not Available	590	Open in IMG/M
3300007004\|Ga0079218_14003160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300009100\|Ga0075418_10781589	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300009100\|Ga0075418_11382839	Not Available	763	Open in IMG/M
3300009146\|Ga0105091_10346512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300009156\|Ga0111538_11082324	Not Available	1014	Open in IMG/M
3300009157\|Ga0105092_10034283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2700	Open in IMG/M
3300009610\|Ga0105340_1047676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1670	Open in IMG/M
3300009610\|Ga0105340_1095269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300010399\|Ga0134127_12581948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300011119\|Ga0105246_12041412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300011412\|Ga0137424_1060243	Not Available	716	Open in IMG/M
3300011412\|Ga0137424_1118643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300011422\|Ga0137425_1030919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1159	Open in IMG/M
3300011422\|Ga0137425_1127817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300011432\|Ga0137428_1080233	Not Available	904	Open in IMG/M
3300012898\|Ga0157293_10297961	Not Available	532	Open in IMG/M
3300012900\|Ga0157292_10006141	Not Available	2483	Open in IMG/M
3300014326\|Ga0157380_10013965	All Organisms → cellular organisms → Bacteria	5864	Open in IMG/M
3300015201\|Ga0173478_10732506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300017965\|Ga0190266_11209431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300018083\|Ga0184628_10231588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	969	Open in IMG/M
3300018422\|Ga0190265_11907592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300018429\|Ga0190272_12235108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300018469\|Ga0190270_10173874	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300018469\|Ga0190270_10649064	All Organisms → cellular organisms → Bacteria → Proteobacteria	1038	Open in IMG/M
3300018469\|Ga0190270_11163542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300018469\|Ga0190270_11223326	Not Available	790	Open in IMG/M
3300022901\|Ga0247788_1069979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300023057\|Ga0247797_1005205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1419	Open in IMG/M
3300025885\|Ga0207653_10434303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300025893\|Ga0207682_10407257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300025908\|Ga0207643_10025387	All Organisms → cellular organisms → Bacteria → Proteobacteria	3274	Open in IMG/M
3300025937\|Ga0207669_10247839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1324	Open in IMG/M
3300025937\|Ga0207669_10964330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300025938\|Ga0207704_10601142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	900	Open in IMG/M
3300026976\|Ga0207525_102836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	823	Open in IMG/M
3300027364\|Ga0209967_1024382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	893	Open in IMG/M
3300027385\|Ga0207540_100805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300027533\|Ga0208185_1081925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300027543\|Ga0209999_1067710	Not Available	683	Open in IMG/M
3300027665\|Ga0209983_1008410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2111	Open in IMG/M
3300027682\|Ga0209971_1004173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	3427	Open in IMG/M
3300027722\|Ga0209819_10331170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300027886\|Ga0209486_10014013	All Organisms → cellular organisms → Bacteria	3649	Open in IMG/M
3300027886\|Ga0209486_10016990	All Organisms → cellular organisms → Bacteria → Proteobacteria	3351	Open in IMG/M
3300027886\|Ga0209486_10930235	Not Available	579	Open in IMG/M
3300027886\|Ga0209486_11139712	Not Available	532	Open in IMG/M
3300027909\|Ga0209382_10039969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	5620	Open in IMG/M
3300027909\|Ga0209382_10040097	Not Available	5611	Open in IMG/M
3300027909\|Ga0209382_10655673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1135	Open in IMG/M
3300027909\|Ga0209382_11626326	Not Available	637	Open in IMG/M
3300028587\|Ga0247828_10050882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1793	Open in IMG/M
3300030619\|Ga0268386_10700291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300031913\|Ga0310891_10054144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1132	Open in IMG/M
3300032012\|Ga0310902_10021032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2859	Open in IMG/M
3300032179\|Ga0310889_10134296	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300033551\|Ga0247830_11662353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300034115\|Ga0364945_0015503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1973	Open in IMG/M
3300034150\|Ga0364933_038684	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.55%
Host-Associated	Host-Associated	39.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.54%
Plants	Host-Associated → Plants	39.45%
Aquatic	Environmental → Aquatic	11.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.17%
Sediment	Environmental → Aquatic → Sediment	8.26%
Freshwater	Environmental → Aquatic → Freshwater	2.75%
Floodplain	Environmental → Terrestrial → Floodplain	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.26%
Loam	Environmental → Terrestrial → Soil → Loam	5.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.75%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	22.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	22.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	13.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.09%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.34%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026976	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A4-11 (SPAdes)	Environmental	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027385	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A5-11 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_01879550	2140918013	Soil	MNKYERGDRNMELTLEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH
F14TC_1048997552	3300000559	Soil	MGEVITLEIDDEGCGRLEFGLPADASEEDIAYIESLVPRRESGWRELLDPRSDEVVFSCRPSLTGESLLQEAASSVV
JGI10215J12807_10917291	3300000881	Soil	EITLEIDDDGCGRLEFELPLDATDEDVTYIESLVPRIESGLLELRDLNTDEVVLSCRPSLTGESLLKTATRSAVKLKH*
JGI10215J12807_11842131	3300000881	Soil	IDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH*
JGI10214J12806_108378102	3300000891	Soil	DGCGRLEFELPLDATDEDVTYIESLVPRIESGLLELRDLNTDEVVLSCRPSLTGESLLKTATRSAVKLKH*
JGI26145J50221_10141741	3300003371	Arabidopsis Thaliana Rhizosphere	MELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH*
Ga0062593_1022006461	3300004114	Soil	MDVITLEIDDDGCGQLQFELPADASAEEVAYIESLVPQIETGLLELRDPGTGEVVFSCRPSLTGESLLKTATRSAVKLRH*
Ga0062590_1004833532	3300004157	Soil	MNHGNYSRNRRDGCGRLEFELPLDATDEDVTYIESLVPRIESGLLELRDLNTDEVVLSCRPSLTGESLLKTATRSAVK
Ga0062590_1013889451	3300004157	Soil	MDVITLEIDDDGCGQLQFELPADASAEEVAYIESLVPKIETGLLELRDPGTGEVVFSCRPSLTGESLLKTATRSAVKLRH*
Ga0063356_1010807342	3300004463	Arabidopsis Thaliana Rhizosphere	TRVDAGTMEVITLEIDDDGCGQLQFELPADATAEEVAYIESLVPRIETGLLELRDPGTDEVVFSCRPSLTGESLLKTATRSAVTLRH*
Ga0063356_1019897192	3300004463	Arabidopsis Thaliana Rhizosphere	MELTLEIDDDGCGRLQFELPADATDEDVAYIESLVPRIETGSIELQDPGTGQVVFSCRPSLTGESLLKTATRSAVKLTH*
Ga0063356_1049687081	3300004463	Arabidopsis Thaliana Rhizosphere	MEVMLKIDNNGLGRLEFELPADALEEDIAYIESLLPRLESGRVDLLDPDSEEVVFSCKPSLTGESLLQEAASCVVKVLD*
Ga0062592_1017785981	3300004480	Soil	IDDDGCGQLQFELPADATDEEVAYIQSLVPQIETGLLELRDPETGEVVLSCRPSLTGESLLKTATGSAVKLKH*
Ga0062594_1005148451	3300005093	Soil	ITLEIDDDGCGRLEFELPLDATDEDVTYIERLVPRIESGLLELRDLNTDEVVLSCRPSLTGESLLKTATRSAVKLKH*
Ga0065707_101572203	3300005295	Switchgrass Rhizosphere	MELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELHDPGTGQVVFSCRPSLTGESLLKTAT
Ga0070676_109635071	3300005328	Miscanthus Rhizosphere	MEVITLEIDDDGCGRLEFELPADATAEEVAYIESLVPRIGTGLLELRDPGTGEVVFSCRPSLTGESLLKTATRSAVKLRH*
Ga0070677_103272382	3300005333	Miscanthus Rhizosphere	MDVITLEIDDDGCGRLQFELPADASAEEVAYIESLVPQIETGLLELRDPGTGEVVFSCRPSLTGESLLKTATRSAVKLRH*
Ga0070674_1000826511	3300005356	Miscanthus Rhizosphere	MEVVTLEIDDDGCGRLRFELPADAPAEEVAYIESLVPRIGTGLLELRDPGTGEVVFSCRPSLTGESLLKTATRSAVKLRH*
Ga0070703_102143442	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VDAEAMELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH*
Ga0070700_1002889811	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	TLEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH*
Ga0070681_103923952	3300005458	Corn Rhizosphere	MELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSAVKLRH*
Ga0070679_1012369231	3300005530	Corn Rhizosphere	AERRWCPCANSRVDAEAMELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH*
Ga0075428_1000429861	3300006844	Populus Rhizosphere	MELITLEIDDDGCGRLQFELPADATAEEVAYIESLVPRIETGLLELRDPGTGEVIFSCRPSFTGVLLLKTATRSAVTLRH*
Ga0075428_1000457959	3300006844	Populus Rhizosphere	MDRYARGYRNMELVTLEIDDDGCGRLQFELPADATAEEVAYIESLVPRIETGLLELRDPGTDEVVFSCRPSLTGESLLKTATRSAVKLSH*
Ga0075428_1005551583	3300006844	Populus Rhizosphere	MSVAWICNAWMQAMDVITLEIDDDGCGRLQFELPADASDEEVAYIESLVPRIESGLLELRDPSTGEVVFSCQPSLTAEALLKTATRSAAKLRQ*
Ga0075428_1007626242	3300006844	Populus Rhizosphere	VSLTGKPTNLSLEIDDDGCGRLQFELPADATDEDIAYIELVPRVESGLLELRDPGTGEVVFSCRPSFTGVLLLKTATRSAVMLTH*
Ga0075428_1008423112	3300006844	Populus Rhizosphere	MELTLEIDDDGCGRLQFELPADATDEDVAYIESLVPRIETGLLELQDPGTGQVVFSCRPSLTGESLLKTATRSTVKLTH*
Ga0075428_1021799921	3300006844	Populus Rhizosphere	MDVILKIDNNGRGRLEFELPADALKEDIAYIESLIPRLESGRLELLDPDSDEVVFSCRPSLTGESLLQETASCVVKVHH*
Ga0075421_1000629255	3300006845	Populus Rhizosphere	MNLSLEIDDDGCGRLQFELPADATDEDIAYIELVPRVESGLLELRDPGTGEVVSSCRPSFTGVLLLKTATRSAVMLRH*
Ga0075421_1002310015	3300006845	Populus Rhizosphere	MEVITLEIDDDGCGRLEFELPADATAEEVAYIESLVPRIETGLLELWDPRTDEVVFSCQPSLTGGSLLKTATRSAVTLRH*
Ga0075421_1003570984	3300006845	Populus Rhizosphere	MELILEIDDDGCGQLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTASRSAVKLRH*
Ga0075421_1012261102	3300006845	Populus Rhizosphere	VINTSVDRNMDLILEIDDDGCGRLQFELPGDATDEDVAYIESLVPRIETGSIELHDPRTGQVVFSCRPSLTGESLLKTATRSAVKLTH*
Ga0075430_1001034745	3300006846	Populus Rhizosphere	VQAVGHRRDNSPPLMMDCGWLRGDRVYEHRRGHRNMELITLEIDDDGCGRLQFELPADATAEEVAYIESLVPRIETGLLELRDPGTGEVIFSCRPSFTGVLLLKTATRSAVTLRH*
Ga0075430_1001989065	3300006846	Populus Rhizosphere	MNLSLEIDDDGCGRLQFELPADATDEDIAYIELVPRVESGLLELRDPGTGEVVFSCRPSFTGVLLLKTATRSAVMLRH*
Ga0075430_1004085802	3300006846	Populus Rhizosphere	MVSMGKYARGGRNMELTLEIDDDGCGRLQFELPADATDEDVAYIESLVPRIETGLLELQDPGTGQVVFSCRPSLTGESLLKTATRSTVKLTH*
Ga0075430_1010603882	3300006846	Populus Rhizosphere	MEVITLEIDDDGCGRLEFELPADATAEEVAYIESLVPRIETGLLELWDPGTDEVVFRCQPSLTGGSLLKTATRSAVTLRH*
Ga0075430_1016447421	3300006846	Populus Rhizosphere	MDVITLEIDDDGCGQLQFELPADASDEEVAYIESLVPRIESGLLELRDPSTGEVVFSCQPSLTAEALLKTATRSAAKLRQ*
Ga0075420_1002353084	3300006853	Populus Rhizosphere	VSLTGKPTNLSLEIDDDGCGRLQFELPADATDEDIAYIELVPRVESGLLELRDPGTGEVVFSCRPSFTGVLLLKTATRSAVMLRH*
Ga0079217_100865903	3300006876	Agricultural Soil	MDLTLEIDDDGCARLQFELPADATDEDVAYIESLVPRIETGLIELEDPGTGQVVFSCRPSVTGESLLKTATRSTVKLTH*
Ga0079217_101316153	3300006876	Agricultural Soil	GRNTDTANEIDDDGCGRLQFDLPADATDEDVAYIESLVPRIEIGWLQLQDPGTGQVIFSCRPSLTCESLLKTAISTVKLTQHSEVDA*
Ga0079215_100786894	3300006894	Agricultural Soil	MEVITLEIDEDGCGRLQFELPADASDAEVAYIESLVPRVESGLLELRDPGTGEVVFSCRPSFTGVLLLKTATRSAVMLRH*
Ga0079215_103764031	3300006894	Agricultural Soil	MDLTLEIDDDGCGRLQFELPADATDEDVAYIESLVPRIETGLIELEDPGTGQVVFSCRPSLTGESLLKTATRSTVKLTH*
Ga0079215_108316792	3300006894	Agricultural Soil	MELITLEIDDDGCGQLQFELPADSTAEEVAYIESLVPRVESGLLELRDPGTGEVVFGCRPSFTGVLLLKTATRSAV
Ga0079216_101836873	3300006918	Agricultural Soil	MDLTLEIDDDGCGRLQFELPADATDEDVAYIESLVPRIETGLIELEDPGTGQVVFSCRPSLTGESLLK
Ga0075419_112801601	3300006969	Populus Rhizosphere	VSLTGKPTNLSLEIDDDGCGRLQFELPADATDEDIAYIELVPRVESGLLELRDPGTGEVVSSCRPSFTGVLLLKTATRSAVMLTH*
Ga0075419_113885591	3300006969	Populus Rhizosphere	MEVITLEIDDDGCGRLEFELPADATAEEVAYIESLVPRIETGLLELRDPGTGEVVFSCRPSLTGESLLKTATCSGVKLKH*
Ga0079218_100050546	3300007004	Agricultural Soil	MDLNLEIDDDGCGRLQFELPADATEEDVAYIKSLVPRIEAGLLQLEDPGTGQVVFSCRPSLTGESLLKTATRSTVKLTH*
Ga0079218_101746482	3300007004	Agricultural Soil	MDLTLEIDDDGCGRLQFELPADATDEDVAYIESLVPRIETGLIELEDPGTGQVVFSCRPSVTGESLLKTATRSTVKLTH*
Ga0079218_125908571	3300007004	Agricultural Soil	MDLALEIDDDGCGRLQFELPADATDEDVAYIESLVPRIEIGWLQLQDPGTGQVIFSCRPSLTCESL
Ga0079218_127328311	3300007004	Agricultural Soil	MELITLAIDDDGCGRLQFELPADSTAEEVAYIESLVPRVESGLLELRDPGTGEVVFGCRPSFTGVLLLKTATRSAVKLRH*
Ga0079218_140031602	3300007004	Agricultural Soil	MEITLEIDDDGCGRLEFELPADATDEDVTYIKSLVPRIASGLLELRDPSTDEVVLSCRPSLTGESLLKTATGSAVKLKH*
Ga0075418_107815892	3300009100	Populus Rhizosphere	LTGKPTNLSLEIDDDGCGRLQFELPADATDEDIAYIELVPRVESGLLELRDPGTGEVVFSCRPSFTGVLLLKTATRSAVMLTH*
Ga0075418_113828391	3300009100	Populus Rhizosphere	RVDAEAMELILEIDDDGCGRLEFELPLDATHEDVTYIESLVPRIESGLLELRDPSTDEVVFRCRPSLTGESLLKTATRSAVKLRH*
Ga0105091_103465121	3300009146	Freshwater Sediment	MEVITLEIDDDGCGRLQFELPADATAEEVAYIESLVPRIEPGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSAVKLTH*
Ga0111538_110823241	3300009156	Populus Rhizosphere	MELILEIDDDGCGQLQFELPADATDEEVAYIESLVPQIETGLLELRDPETGEVVLSCRPSLTGEVLLKTATRSAVKLKHRNKKPGAWPGSMLRPM*
Ga0105092_100342834	3300009157	Freshwater Sediment	MEVTLEIDDDGCGRLQFELPADATDEDVAYIESLVPQIETGLLELQDPGTGQVVFSCRPSLTGESLLKTATRSAVKLSY*
Ga0105340_10476762	3300009610	Soil	MEVITLEIDDHGCGRLQFELPADATNEEIAYIESLVPRIKTGLLELRDPGTGEVVLSCRPSLLKTATRSAVKLRH*
Ga0105340_10952692	3300009610	Soil	ARGLGIMEVITLEIDADGCGRLQFELPADTSPEEVAYIESLVPRIEPGLLKLRGPGTGEVVFSCRPSLTGESLLKTATCSAVTLRH*
Ga0134127_125819481	3300010399	Terrestrial Soil	EAMELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH*
Ga0105246_120414121	3300011119	Miscanthus Rhizosphere	MPPRAVELTVPSFGTDIQGVDAGIMDVITLEIDDDGCGQLQFELPADASAEEVAYIESLVPKIETGLLELRDPGTGEVVFSCRPSLTGESLLKTATRSAVKLRH*
Ga0137424_10602431	3300011412	Soil	MEVITLEIDADGCGRLQFELPDDATAEEVAYIESLVPRIDHGLLELREPGTGEVVFSCRPSLTGESLLKTATCSAVTLRH*
Ga0137424_11186432	3300011412	Soil	LTIDDGSLLSERRLCPWSENARGAGIMEVITLEIDDHGCGRLQFELPADATNEEIAYIESLVPRIKTGLLELRDPGTGEVVLSCRPSLLKTATRSAVKLRH*
Ga0137425_10309191	3300011422	Soil	NTARGAGIMEVITLEIDDDGCGRLQFELPDDATAEEVAYIESLVPRIDHGLLELRDPGTGEVVFSCRPSLTGESLLKTATCSAVTLRH*
Ga0137425_11278171	3300011422	Soil	MDQYARGARIMGVITLEIDDHGCGRLQFELPADATDEEVAYIESLVPRIKTGLLELRDPGTGEVVLSCRPSLTGESLLKTATSSGVKLKH*
Ga0137428_10802332	3300011432	Soil	MQVITLEIDADGCVRLQFELPDDATAEEVAYIESLVPRIDHGLLELRDPGTGEVVFSCRPSLTGKSLLKTATRSAVKLRH*
Ga0157293_102979612	3300012898	Soil	TLEIDDDGCGRLEFELPLDATDEDVTYIERLEPRIESGLLELRDLNTDEVVLSCRPSLTGESLLKTATRSAVKLKH*
Ga0157292_100061413	3300012900	Soil	DDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH*
Ga0157380_100139652	3300014326	Switchgrass Rhizosphere	MELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELHDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH*
Ga0173478_107325061	3300015201	Soil	MEITLEIDDDGCGRLEFELPLDATDEDVTYIESLVPRIESGLLELRDLNTDEVVLSCRPSLTGESL
Ga0190266_112094311	3300017965	Soil	VPSFGTDIQRVDAGMDVITLEIDDDGCGRLQFELPADATAEEVAYIESLVPQLETGLLELRDPGTGEVVFSCRPSLTGESLLKTATRSAVKLRH
Ga0184628_102315882	3300018083	Groundwater Sediment	MDSCRLRGDCVPNNARGLGIMEVITLEIDADGCGRLQFELPDDATAEEVAYIESLVPRIDHGLLELRDPGTGEVVFSCRPSLTGESLLKTATCSAVTLRH
Ga0190265_119075922	3300018422	Soil	MEVITLEIDDDGCGRLQFELPADATAEEVAYIESLVPRIETGLLELRDPGTGEVVFSCRPSFTGVLLLKTATRSAVKLRQCRFDRRPPIASSWQGAEAS
Ga0190272_122351082	3300018429	Soil	MEVITLEIDDHGCGRLQFELPADATDEEVAYIESLVPRIKTGLLELRDPGTGEVVLSCRPSLLKTATRSAVKLRH
Ga0190270_101738742	3300018469	Soil	MEVITLEIDADGCGRLQFELPDDATAEEVAYIESLVPRIDHGLLELRDPGTGEVVFSCRPSLTGDSLLKTATSSGVKLKH
Ga0190270_106490642	3300018469	Soil	MEVITLEIDDDGCGQLQFELPADATADEVAYIESLVPRIEPGLLELRDPGTDEVVFSCRPSLTGESLLKTATRSAVTLRH
Ga0190270_111635421	3300018469	Soil	MEVITLEIDDHGCGRLQFELPADATNEEIAYIESLVPRIKTGLLELRDPGTGDVVLSCRPSLLKTARRSAVMLRH
Ga0190270_112233261	3300018469	Soil	MDPRGCGSMEVITLEIDEDGCGRLQFELPADTTAEEVAYIESLVPQIETGLLELRDPGTGEVVFSCRPSFTGVLLLKTATCSAVTLRH
Ga0247788_10699792	3300022901	Soil	ILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH
Ga0247797_10052052	3300023057	Soil	MELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH
Ga0207653_104343031	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	ANSRVDAEAMELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH
Ga0207682_104072573	3300025893	Miscanthus Rhizosphere	MDVITLEIDDDGCGRLQFELPADASAEEVAYIESLVPKIETGLLELRDPGTGEVVFSCRPSLTGESLLKTATRSAVKLRH
Ga0207643_100253877	3300025908	Miscanthus Rhizosphere	MDVITLEIDDDGCGQLQFELPADASAEEVAYIESLVPKIETGLLELRDPGTGEVVFSCRPSLTGESL
Ga0207669_102478391	3300025937	Miscanthus Rhizosphere	PAERRWCPCANSRVDAEAMELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH
Ga0207669_109643301	3300025937	Miscanthus Rhizosphere	MEVVTLEIDDDGCGRLRFELPADAPAEEVAYIESLVPRIGTGLLELRDPGTGEVVFSCRPSLTGESLLKTATRSAVKLRH
Ga0207704_106011422	3300025938	Miscanthus Rhizosphere	MELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRS
Ga0207525_1028361	3300026976	Soil	MELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKL
Ga0209967_10243822	3300027364	Arabidopsis Thaliana Rhizosphere	MELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEV
Ga0207540_1008052	3300027385	Soil	MELTLEIDDEGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH
Ga0208185_10819252	3300027533	Soil	SGWLRGDCVHGSITRADAGIMELITLEIDDDGCGRLQFELPADATNEEIAYIESLVPRIKTGLLELRDPGTGEVVLSCRPSLLKTATRSAVKLRH
Ga0209999_10677102	3300027543	Arabidopsis Thaliana Rhizosphere	VDAEAMELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTRSRELRRD
Ga0209983_10084101	3300027665	Arabidopsis Thaliana Rhizosphere	LEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH
Ga0209971_10041732	3300027682	Arabidopsis Thaliana Rhizosphere	MELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSAVKLKH
Ga0209819_103311701	3300027722	Freshwater Sediment	MEVTLEIDDDGCGRLQFELPADATDEDVAYIESLVPQIETGLLELQDPGTGQVVFSCRPSLTGESLLKTATRSAVKLSY
Ga0209486_100140134	3300027886	Agricultural Soil	MDLTLEIDDDGCGRLQFELPADATDEDVAYIESLVPRIETGLIELEDPGTGQVVFSCRPSLTGESLLKTATRSTVKLTH
Ga0209486_100169904	3300027886	Agricultural Soil	MEVITLEIDEDGCGRLQFELPADASDAEVAYIESLVPRVESGLLELRDPGTGEVVFSCRPSFTGVLLLKTATRSAVMLRH
Ga0209486_109302352	3300027886	Agricultural Soil	MDLNLEIADDGCGRLQFELPADATDADVAYIKSLVPRIEAGLLQLEDPGTGQVVFSCRPSLTGESLLKTATRSTVKLTH
Ga0209486_111397121	3300027886	Agricultural Soil	MDLALEIDDDGCGRLQFELPADATDEDVAYIESLVPRIEIGWLQLQDPGTGQVIFSCRPSLTCESLLKTAISTVKLTQHSEVDA
Ga0209382_100399695	3300027909	Populus Rhizosphere	MELITLEIDDDGCGRLQFELPADATAEEVAYIESLVPRIETGLLELRDPGTGEVIFSCRPSFTGVLLLKTATRSAVTLRH
Ga0209382_100400972	3300027909	Populus Rhizosphere	MELVTLEIDDDGCGRLQFELPADATAEEVAYIESLVPRIETGLLELWDPRTDEVVFSCQPSLTGGSLLKTATRSAVTLRH
Ga0209382_106556732	3300027909	Populus Rhizosphere	MELILEIDDDGCGQLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTASRSAVKLRH
Ga0209382_116263261	3300027909	Populus Rhizosphere	NMDLILEIDDDGCGRLQFELPGDATDEDVAYIESLVPRIETGSIELHDPRTGQVVFSCRPSLTGESLLKTATRSAVKLTH
Ga0247828_100508821	3300028587	Soil	MELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELHDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH
Ga0268386_107002911	3300030619	Soil	MEVITLEIDDDGCGRLQFELPDDATAEEVAYIESLVPRIDHGLLELREPGTGEVVFSCWPSLTGESLLKTATSSGVKLKH
Ga0310891_100541442	3300031913	Soil	VNSRVDAEAMELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH
Ga0310902_100210323	3300032012	Soil	MELILEIDDDGCGRLQFELPADATAEDVAYIESLVPRIKTGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH
Ga0310889_101342962	3300032179	Soil	GCGRLEFELPLDATDEDVTYIESLVPRIESGLLELRDLNTDEVVLSCRPSLTGESLLKTATRSAVKLKH
Ga0247830_116623532	3300033551	Soil	CGRLQFELPADATAEDVAYIESLVPRIETGLLELRDPGTGQVVFSCRPSLTGESLLKTATRSEVKLTH
Ga0364945_0015503_554_796	3300034115	Sediment	MEVVTLEIDDDGCGRLQFELPADATAEEVAYIESLVPRIETGLLELRDPGTGEVVFSCRPSLTGESLLKTGTRSAVKLRH
Ga0364933_038684_109_351	3300034150	Sediment	MEVVTLEIDDDGCGRLQFELPADATAEEVAYIESLVPRIETGLLELWDPGTGEVVFSCRPSLTGESLLKTATRSAVKLRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088474

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences