Metagenome / Metatranscriptome Family F085212

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085212
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	61 residues
Representative Sequence	MRAFQETTKDWVGNVSNHIYYLTDDKSKMVAFYNVDTKQVKKFIKPIRFDMRYRTFKELKHK
Number of Associated Samples	87
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	65.45 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	62.16 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (56.757 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (17.117 % of family members)
Environment Ontology (ENVO)	Unclassified (50.450 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (68.468 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 33.33% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF14743	DNA_ligase_OB_2	18.02
PF01068	DNA_ligase_A_M	16.22
PF00011	HSP20	5.41
PF04675	DNA_ligase_A_N	2.70
PF00268	Ribonuc_red_sm	1.80
PF01818	Translat_reg	1.80
PF16790	Phage_clamp_A	1.80
PF05118	Asp_Arg_Hydrox	1.80
PF00301	Rubredoxin	0.90
PF07460	NUMOD3	0.90
PF00004	AAA	0.90
PF00149	Metallophos	0.90
PF08406	CbbQ_C	0.90
PF00085	Thioredoxin	0.90
PF13361	UvrD_C	0.90
PF00355	Rieske	0.90
PF13759	2OG-FeII_Oxy_5	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	18.92
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	16.22
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	5.41
COG0208	Ribonucleotide reductase beta subunit, ferritin-like domain	Nucleotide transport and metabolism [F]	1.80
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	1.80
COG0714	MoxR-like ATPase	General function prediction only [R]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.69 %
Unclassified	root	N/A	6.31 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	90.09 %
Unclassified	root	N/A	6.31 %
cellular organisms	root	All Organisms → cellular organisms	3.60 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	56.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Unclassified	root	N/A	6.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.70 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.90 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	56.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Unclassified	root	N/A	6.31 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.90 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	56.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Unclassified	root	N/A	6.31 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	56.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Unclassified	root	N/A	6.31 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	0.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	51.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Unclassified	root	N/A	6.31 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.90 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	0.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	51.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Unclassified	root	N/A	6.31 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.90 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	0.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	51.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Unclassified	root	N/A	6.31 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.90 %
Methanobrevibacter	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter	0.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	51.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Unclassified	root	N/A	6.31 %
Methanobrevibacter ruminantium	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → Methanobrevibacter ruminantium	0.90 %
Streptomyces brasiliscabiei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces brasiliscabiei	0.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	51.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Unclassified	root	N/A	6.31 %
Methanobrevibacter ruminantium M1	strain	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → Methanobrevibacter ruminantium → Methanobrevibacter ruminantium M1	0.90 %
Streptomyces brasiliscabiei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces brasiliscabiei	0.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352004\|2199786156	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	125313	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1000507	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	30543	Open in IMG/M
3300001837\|RCM39_1079586	All Organisms → Viruses → Predicted Viral	1215	Open in IMG/M
3300001848\|RCM47_1162340	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	585	Open in IMG/M
3300002354\|B570J29626_1007679	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	798	Open in IMG/M
3300002835\|B570J40625_100114614	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3244	Open in IMG/M
3300003277\|JGI25908J49247_10041089	All Organisms → Viruses → Predicted Viral	1248	Open in IMG/M
3300003412\|JGI25912J50252_10005094	All Organisms → Viruses → Predicted Viral	4456	Open in IMG/M
3300004763\|Ga0007746_1408112	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	567	Open in IMG/M
3300004766\|Ga0007747_1314702	Not Available	706	Open in IMG/M
3300005581\|Ga0049081_10006763	All Organisms → Viruses → Predicted Viral	4339	Open in IMG/M
3300005581\|Ga0049081_10012100	All Organisms → cellular organisms → Bacteria → Proteobacteria	3261	Open in IMG/M
3300005581\|Ga0049081_10070931	All Organisms → Viruses → Predicted Viral	1310	Open in IMG/M
3300005581\|Ga0049081_10179598	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	765	Open in IMG/M
3300005584\|Ga0049082_10029241	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1923	Open in IMG/M
3300005941\|Ga0070743_10001492	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8910	Open in IMG/M
3300007169\|Ga0102976_1105628	All Organisms → Viruses → Predicted Viral	2117	Open in IMG/M
3300007171\|Ga0102977_1155571	All Organisms → Viruses → Predicted Viral	2155	Open in IMG/M
3300007562\|Ga0102915_1280111	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	539	Open in IMG/M
3300007590\|Ga0102917_1054996	All Organisms → Viruses → Predicted Viral	1398	Open in IMG/M
3300007593\|Ga0102918_1000437	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8526	Open in IMG/M
3300007603\|Ga0102921_1109086	All Organisms → Viruses → Predicted Viral	1005	Open in IMG/M
3300007716\|Ga0102867_1110296	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	735	Open in IMG/M
3300007962\|Ga0102907_1093872	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	785	Open in IMG/M
3300008055\|Ga0108970_10348828	All Organisms → Viruses → Predicted Viral	1620	Open in IMG/M
3300008055\|Ga0108970_10920424	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	657	Open in IMG/M
3300008117\|Ga0114351_1169735	All Organisms → Viruses → Predicted Viral	1177	Open in IMG/M
3300008120\|Ga0114355_1037354	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5360	Open in IMG/M
3300008259\|Ga0114841_1003061	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13794	Open in IMG/M
3300008962\|Ga0104242_1030388	Not Available	925	Open in IMG/M
3300009026\|Ga0102829_1201806	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	646	Open in IMG/M
3300009151\|Ga0114962_10144618	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1435	Open in IMG/M
3300009151\|Ga0114962_10638962	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	549	Open in IMG/M
3300009159\|Ga0114978_10221791	All Organisms → Viruses → Predicted Viral	1186	Open in IMG/M
3300009182\|Ga0114959_10000248	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	52140	Open in IMG/M
3300009182\|Ga0114959_10020025	All Organisms → Viruses → Predicted Viral	4274	Open in IMG/M
3300009182\|Ga0114959_10043563	All Organisms → Viruses → Predicted Viral	2647	Open in IMG/M
3300009182\|Ga0114959_10192327	All Organisms → Viruses → Predicted Viral	1061	Open in IMG/M
3300009182\|Ga0114959_10336877	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	747	Open in IMG/M
3300010158\|Ga0114960_10065397	All Organisms → Viruses → Predicted Viral	2104	Open in IMG/M
3300010158\|Ga0114960_10246773	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	913	Open in IMG/M
3300010158\|Ga0114960_10301762	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	803	Open in IMG/M
3300010307\|Ga0129319_1131066	Not Available	584	Open in IMG/M
3300010885\|Ga0133913_10446083	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3416	Open in IMG/M
3300011268\|Ga0151620_1000013	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	68373	Open in IMG/M
3300011268\|Ga0151620_1013826	All Organisms → Viruses → Predicted Viral	2857	Open in IMG/M
3300012345\|Ga0157139_1002278	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	947	Open in IMG/M
3300012346\|Ga0157141_1046754	Not Available	534	Open in IMG/M
3300012347\|Ga0157142_1000039	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	72100	Open in IMG/M
3300013014\|Ga0164295_10304785	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1201	Open in IMG/M
3300013093\|Ga0164296_1166062	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	870	Open in IMG/M
3300013372\|Ga0177922_11053107	All Organisms → Viruses → Predicted Viral	1817	Open in IMG/M
3300017777\|Ga0181357_1046539	All Organisms → Viruses → Predicted Viral	1700	Open in IMG/M
3300020141\|Ga0211732_1149062	All Organisms → Viruses → Predicted Viral	3784	Open in IMG/M
3300020151\|Ga0211736_10978188	All Organisms → Viruses → Predicted Viral	4464	Open in IMG/M
3300020160\|Ga0211733_10116200	All Organisms → Viruses → Predicted Viral	3127	Open in IMG/M
3300020572\|Ga0207909_1062478	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	559	Open in IMG/M
3300020710\|Ga0214198_1004934	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1867	Open in IMG/M
3300021138\|Ga0214164_1045223	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	993	Open in IMG/M
3300021519\|Ga0194048_10050176	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1688	Open in IMG/M
3300021962\|Ga0222713_10078122	All Organisms → Viruses → Predicted Viral	2425	Open in IMG/M
3300021962\|Ga0222713_10627899	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	623	Open in IMG/M
3300021963\|Ga0222712_10004049	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	15562	Open in IMG/M
3300021963\|Ga0222712_10012488	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7537	Open in IMG/M
3300021963\|Ga0222712_10615799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces brasiliscabiei	625	Open in IMG/M
3300021963\|Ga0222712_10696658	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	573	Open in IMG/M
3300022407\|Ga0181351_1106132	All Organisms → Viruses → Predicted Viral	1078	Open in IMG/M
3300022591\|Ga0236341_1002183	Not Available	10199	Open in IMG/M
3300022602\|Ga0248169_103236	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	18821	Open in IMG/M
3300022746\|Ga0228701_1000041	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	166547	Open in IMG/M
3300023174\|Ga0214921_10539257	Not Available	541	Open in IMG/M
3300023184\|Ga0214919_10017719	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8185	Open in IMG/M
3300024346\|Ga0244775_10101692	All Organisms → Viruses → Predicted Viral	2444	Open in IMG/M
3300024346\|Ga0244775_10902208	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	702	Open in IMG/M
3300024346\|Ga0244775_10944248	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	683	Open in IMG/M
3300024348\|Ga0244776_10123392	All Organisms → Viruses → Predicted Viral	1913	Open in IMG/M
3300024484\|Ga0256332_1127774	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → Methanobrevibacter ruminantium → Methanobrevibacter ruminantium M1	544	Open in IMG/M
3300024557\|Ga0255283_1069811	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	761	Open in IMG/M
3300024562\|Ga0256336_1004559	All Organisms → Viruses → Predicted Viral	2690	Open in IMG/M
3300024568\|Ga0255238_1131986	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	590	Open in IMG/M
3300026569\|Ga0255277_1017652	All Organisms → Viruses → Predicted Viral	1862	Open in IMG/M
3300026570\|Ga0255274_1124036	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	655	Open in IMG/M
3300027156\|Ga0255078_1090398	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	586	Open in IMG/M
3300027218\|Ga0208165_1039220	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	701	Open in IMG/M
3300027259\|Ga0208178_1032271	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	969	Open in IMG/M
3300027261\|Ga0208933_1004158	All Organisms → Viruses → Predicted Viral	2285	Open in IMG/M
3300027278\|Ga0208439_1018912	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1424	Open in IMG/M
3300027278\|Ga0208439_1022243	All Organisms → Viruses → Predicted Viral	1302	Open in IMG/M
3300027336\|Ga0255128_1088442	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	597	Open in IMG/M
3300027586\|Ga0208966_1055195	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1130	Open in IMG/M
3300027597\|Ga0255088_1053788	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	794	Open in IMG/M
3300027608\|Ga0208974_1012066	All Organisms → Viruses → Predicted Viral	2781	Open in IMG/M
3300027608\|Ga0208974_1098209	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	784	Open in IMG/M
3300027659\|Ga0208975_1024652	All Organisms → Viruses → Predicted Viral	1951	Open in IMG/M
3300027659\|Ga0208975_1118414	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	757	Open in IMG/M
3300027679\|Ga0209769_1230616	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	567	Open in IMG/M
3300027708\|Ga0209188_1000380	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	44844	Open in IMG/M
3300027708\|Ga0209188_1026170	All Organisms → cellular organisms → Bacteria	2871	Open in IMG/M
3300027708\|Ga0209188_1029746	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2628	Open in IMG/M
3300027732\|Ga0209442_1000320	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	28941	Open in IMG/M
3300027747\|Ga0209189_1199983	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	824	Open in IMG/M
3300027782\|Ga0209500_10031398	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2989	Open in IMG/M
3300027782\|Ga0209500_10126711	All Organisms → Viruses → Predicted Viral	1230	Open in IMG/M
3300027798\|Ga0209353_10088203	All Organisms → Viruses → Predicted Viral	1406	Open in IMG/M
3300027808\|Ga0209354_10275170	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	673	Open in IMG/M
3300028393\|Ga0304728_1175026	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	761	Open in IMG/M
3300031758\|Ga0315907_10131751	All Organisms → Viruses → Predicted Viral	2127	Open in IMG/M
3300031857\|Ga0315909_10312176	All Organisms → Viruses → Predicted Viral	1169	Open in IMG/M
3300031884\|Ga0316220_1161135	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	801	Open in IMG/M
3300032050\|Ga0315906_10044662	All Organisms → Viruses → Predicted Viral	4667	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.20%
Host-Associated	Host-Associated	1.80%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.20%
Plants	Host-Associated → Plants	1.80%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	75.68%
Marine	Environmental → Aquatic → Marine	22.52%
Leaf	Host-Associated → Plants → Leaf	1.80%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	31.53%
Lentic	Environmental → Aquatic → Freshwater → Lentic	26.13%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	12.61%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.01%
River	Environmental → Aquatic → Freshwater → River	8.11%
Lotic	Environmental → Aquatic → Freshwater → Lotic	6.31%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	1.80%
Creek	Environmental → Aquatic → Freshwater → Creek	0.90%
Coastal	Environmental → Aquatic → Marine → Coastal	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	31.53%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	19.82%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	12.61%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.01%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	8.11%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	6.31%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.41%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	1.80%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	17.12%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	12.61%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	9.01%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	9.01%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	8.11%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	5.41%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.41%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.41%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.50%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.60%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.70%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.80%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.90%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.90%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352004	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300001837	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM39, ROCA_DNA237_0.2um_Ob_C_3a	Environmental	Open in IMG/M
3300001848	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM47, ROCA_DNA265_0.2um_TAP-S_3a	Environmental	Open in IMG/M
3300002354	Freshwater microbial communities from Lake Mendota, WI - 21JUN2010 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300004763	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004766	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300007169	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Bottom layer) 8 sequencing projects	Environmental	Open in IMG/M
3300007171	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface layer) 8 sequencing projects	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007593	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental	Open in IMG/M
3300007716	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3	Environmental	Open in IMG/M
3300007962	Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010307	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012345	Freshwater microbial communities from Burnt River, Ontario, Canada - S22	Environmental	Open in IMG/M
3300012346	Freshwater microbial communities from Emily Creek, Ontario, Canada - S29	Environmental	Open in IMG/M
3300012347	Freshwater microbial communities from Fish Creek, Ontario, Canada - S48	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020572	Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022591	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S2	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300022746	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17_Aug_MG	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024484	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024557	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024562	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024568	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026569	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026570	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027156	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8h	Environmental	Open in IMG/M
3300027218	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3 (SPAdes)	Environmental	Open in IMG/M
3300027259	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3 (SPAdes)	Environmental	Open in IMG/M
3300027261	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3 (SPAdes)	Environmental	Open in IMG/M
3300027278	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 (SPAdes)	Environmental	Open in IMG/M
3300027336	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepC_8d	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027597	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepB_8d	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300028393	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2199943294	2199352004	Freshwater	MRAFLETTKDWAHPCPNHIYYLTDDKSKLVAFYNVVTKKVTKMSKPIRFDTRYRTFKELK
TBL_comb48_EPIDRAFT_100050721	3300000439	Freshwater	MRAFQEITPDWVGNVPNHIYYLTDNKEKMVAFYNVNSGEVKKFIKPMRFDMRYRKFKELKHK*
RCM39_10795863	3300001837	Marine Plankton	MKAFQETTKDWVGNVSNHIYYLSDDKRKMYAFYNVDSGVVKKFSKPIGFDPRYRTFKELKHK*
RCM47_11623402	3300001848	Marine Plankton	MRVFQETTKDWVGNVTNHIYYLTDNKEKMVAFYNVNTKTVKKFIKPIRFDMRYRTFKELKHK*
B570J29626_10076792	3300002354	Freshwater	TKDWAHPCPNHIYYLTDDKSKLVAFYNVVTKKVTKMSKPIRFDTRYRTFKELK*
B570J40625_1001146147	3300002835	Freshwater	MRVFQETTKDWAVKCPNHIYLLTDDKSKMVAFYNVDTKKVTKFSKPIRFDTRYRTFKELK
JGI25908J49247_100410891	3300003277	Freshwater Lake	IRLMKAFVETTKDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKTFIKPIGFDPRYRTFKELKRK*
JGI25912J50252_100050941	3300003412	Freshwater Lake	MKAFVETTKDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKTFIKPIGFDPRYRTFKE
Ga0007746_14081122	3300004763	Freshwater Lake	MKAFVETTKDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKTFIKPIGFDPRYRTFKELKRK*
Ga0007747_13147022	3300004766	Freshwater Lake	MRALQETTSDWSHKVSNHIYYVNDNRTKLVAFYNVDTKTTKKFSKPLPFYTKYRTFKELK
Ga0049081_100067638	3300005581	Freshwater Lentic	KDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKKFIKPIAFDPRYRTFKELKRK*
Ga0049081_100121008	3300005581	Freshwater Lentic	MKAFVETTKDWAHPVSNHIYYLSDDKRKMYAFYNIDTQTVKKFIKPIGFDPRYRTFKELKRK*
Ga0049081_100709312	3300005581	Freshwater Lentic	KDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKKFIKPIGFDPRFRTFKELKRK*
Ga0049081_101795982	3300005581	Freshwater Lentic	MRVFQEITNDWVGNVTNHIYYLTDDKSKMVAFYNMDTKQVKKFIKPIRFDMRYRRFKELKHK*
Ga0049082_100292413	3300005584	Freshwater Lentic	MKAFLETTKDWSHPCPNHIYYLTDDKSKLVAFYNVVTNKVTKMSKPIRFDTRYRTFKELKQK*
Ga0070743_1000149215	3300005941	Estuarine	MRVFQETTPDWVGNVSNHIYYLTDDKSKMVAFYNVDTGVVKKFIKPIRFDMRYRKFKELKHK*
Ga0102976_11056284	3300007169	Freshwater Lake	FLETTKDWVGDVPNHIYYLTDDKSKMVAFYNVVTGETKKFKKPIGFDTRRRTFKELKRK*
Ga0102977_11555714	3300007171	Freshwater Lake	MRAFLETTKDWVGDVPNHIYYLTDDKSKMVAFYNVVTGETKKFKKPIGFDTRRRTFKELKRK*
Ga0102915_12801112	3300007562	Estuarine	MRVFKETTKDWVGNVSNHIYYLTDDKSKMVAFYNVDTKQVKKFIKPIRIDMRYRTFKELK
Ga0102917_10549961	3300007590	Estuarine	MRVFKETTKDWVGNVSNNIYYLTDDKSKMVAFYNVDTKQVKKFIKPIRIEMR
Ga0102918_100043715	3300007593	Estuarine	FQETTPDWVGNVSNHIYYLTDDKSKMVAFYNVDTGVVKKFIKPIRFDMRYRKFKELKHK*
Ga0102921_11090862	3300007603	Estuarine	MRDFKETTQDWVGNVSNHIYYLTDDKSKMVAFYNVDTKQVKKFIKPIRIDMRYRTFKELK
Ga0102902_10861462	3300007644	Estuarine	VKCPNHIYLLTDDKSKMVAFYNVDTKKVTKFSKPIRFDTRYRTFKELK*
Ga0102867_11102961	3300007716	Estuarine	PLWLLQENRMRVFQETTPDWVGNVSNHIYYLTDDKSKMVAFYNVDTGVVKKFIKPIRFDMRYRKFKELKHK*
Ga0102907_10938722	3300007962	Estuarine	VFLFHAGSPLWLLQENRMRVFQETTPDWVGNVSNHIYYLTDDKSKMVAFYNVDTGVVKKFIKPIRFDMRYRKFKELKHK*
Ga0108970_103488283	3300008055	Estuary	MKAFQETTKDWVGNVSNHIYYLSDDKRKLYAFYNVDTGLVKKFTKPIGFDPRYRTFKELKRK*
Ga0108970_109204242	3300008055	Estuary	MKAFQETTKDWTGDVSNHIYYLSDDKRKLHAFYNVDTGLVKKFNKPIGFDPRYRTFKELRRK*
Ga0114351_11697352	3300008117	Freshwater, Plankton	MKAFVETTKDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKKFIKSIAFDPRYRTFKELKRK*
Ga0114355_10373544	3300008120	Freshwater, Plankton	MKAFVETTKDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKKFIKPIAFDPHATIRLNS*
Ga0114841_100306110	3300008259	Freshwater, Plankton	MKAFVETTKDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKKFIKPIAFDPRYRTFKELKRK*
Ga0104242_10303881	3300008962	Freshwater	MKDFQETTKDWVGNVSNHIYYLSDDKRKLYAFYNVDTGLVKKFNKPIGFDPRY
Ga0102829_12018062	3300009026	Estuarine	VGNVTNHIYYLTDDKSKMVAFYNMDTKQVKKFIKPIRFDMRYRRFKELKHK*
Ga0114962_101446182	3300009151	Freshwater Lake	MRVFQETTSDWVGNVTNHIYYLTDDKSKMVAFYNVNTGEVKKFIKPIRFDMRYRKFKELKHK*
Ga0114962_106389621	3300009151	Freshwater Lake	WVGKVSNHIYYLTDDKSKMVAFYNVDTKQIKKFIKPIRFDMRYRTFKELKHK*
Ga0114978_102217912	3300009159	Freshwater Lake	MRAFQETTKDWVGNVSNHIYYLTDDKSKMVAFYNVDTKQIKKFIKPIRFDMRYRTFKELKHK*
Ga0114959_1000024846	3300009182	Freshwater Lake	MRAFQETTKDWVGNVSNHIYYLTDDKSKMVAFYNVDTKQVKKFIKPIRFDMRYRTFKELKHK*
Ga0114959_100200256	3300009182	Freshwater Lake	MRAFQETTKDWVGKVSNHIYYLTDNKEKMVAFYNVDTGEVKKFSQPIRFDKRYRTFKELKRK*
Ga0114959_100435632	3300009182	Freshwater Lake	MRAFQETTSTWTSNVTNHIYYLNDTKEFMVAFYNVNTGEVKKFSKRIKFDMRHRTFKELKHK*
Ga0114959_101923272	3300009182	Freshwater Lake	MRVFQETTSDWVVNVTNHIYYLTDDKSKMVAFYNVNTGEVKKFIKPIRFDMRYRKFKELKHK*
Ga0114959_103368772	3300009182	Freshwater Lake	MRVFQETTKNWVGNVPNHIYYLTDNKEKMVAFYNVNTKTIKKFIQPIRFDSRYRTFKELKHI*
Ga0114960_100653974	3300010158	Freshwater Lake	MRVFQETTSDWVGNVTNHIYYLTDDKSKMVAFYNVNTGVVKKLIKPIRFDMRYRKFKELKHK*
Ga0114960_102467731	3300010158	Freshwater Lake	VGKVSNHIYYLTDNKEKMVAFYNVDTGEVKKFSQPIRFDKRYRTFKELKRK*
Ga0114960_103017622	3300010158	Freshwater Lake	MRAFQETTKDWVGKVSNHIYYLTDDKSKMVAFYNVDTKQIKKFIKPIRFDMRYRTFKELKHK*
Ga0129319_11310662	3300010307	Aqueous	MRALQETTSDWSHKVSNHIYYVSDNRTKLVAFYNVDTKTTKKFSKPLPFYTKYRTLKELK
Ga0133913_1044608310	3300010885	Freshwater Lake	MRVFQETTKDWVGNVTNHIYYLTDNKEKMVAFYNVNTKQIKKFIKPIRFDTRRRTFKELKHI*
Ga0151620_100001349	3300011268	Freshwater	MKAYQETTKDWVGDVANHIYYLSDDKRKLYAFYNVNTGSVKTFKKPIGFDPRYRTFKELKRK*
Ga0151620_10138264	3300011268	Freshwater	MKVFQETTKDWVGNVSNHIYYLSDDKRKLHAFYNVDTGLVKKFNKPIGFDPRYRTFKELRRK*
Ga0157139_10022782	3300012345	Freshwater	PDWVGNVSNHIYYLTDDKSKMVAFYNVDTGVVKKFIKPIRFDMRYRKFKELKHK*
Ga0157141_10467542	3300012346	Freshwater	MRVFQETTKDWVGDVTNHIYYLTDNKEKMVAFFNVNTGLIKKFKNPIRFDMRRRTFKELKHK*
Ga0157142_100003932	3300012347	Freshwater	MRVFQETTKDWAVDCPNHIYYLTDDKSKMVAFYNVNTGKTTKFKKPIGFDTRRRTFKELKRK*
Ga0164295_103047851	3300013014	Freshwater	MKAFQETTKDWRVPVPNHIYYLTDDKKRMIAFYNVVTKTVKKFSKPMHFDTKYRTFKELK
Ga0164296_11660622	3300013093	Freshwater	MRAFQETTKDWVGNVTNHIYYLTDNKEKLVAFYNVNTGVVKKFKKPIRFDMRYRTFKELKHK*
Ga0177922_110531071	3300013372	Freshwater	PLRLLSESSMRVFQEITNDWVGNVTNHIYYLTDDKSKMVAFYNMDTKQVKKFIKPIRFDMRYRRFKELKHK*
Ga0181357_10465391	3300017777	Freshwater Lake	VPLLLAWSSLWLLQESSMRVFQETTDWKEHGVPNHIYYTSDSKSKIYAFYNTVTGEIKKFSKPIRWDMRYRTFKELKHK
Ga0211732_11490624	3300020141	Freshwater	MRVFQETTPDWVGNVSNHIYYLTDDKSKMVAFYNVDTGVVKKFIKPIRFDMRYRKFKELKHK
Ga0211736_109781885	3300020151	Freshwater	MRVFQETTKDWVGNVTNHIYYLTDNKEKMVAFYNVNTKQIKKFIKPIRFDTRHRTFKELKHI
Ga0211733_101162003	3300020160	Freshwater	MRVFQETTPDWVGNVSNHIYYLTDDKSKMVAFYNVNTGVVKKFIKPIRFDMRYRKFKELKHK
Ga0207909_10624782	3300020572	Freshwater	MKAFVETTKDWAHPVSNHIYYLSEDKRKMYAFYNIDTQTVKTFIKPIGFDPRYRTFKELKRK
Ga0214198_10049342	3300020710	Freshwater	MRAFQEITPDWVGNVPNHIYYLTDNKEKMVAFYNVNSGEVKKFIKPMRFDMRYRKFKELKHK
Ga0214164_10452231	3300021138	Freshwater	IMRAFQEITPDWVGNVPNHIYYLTDNKEKMVAFYNVNSGEVKKFIKPMRFDMRYRKFKELKHK
Ga0194048_100501762	3300021519	Anoxic Zone Freshwater	MRAFQETTKDWVGKVSNHIYYLTDNKEKMIAFYNVDTGEVKKFSQPIRFDKRYRTFKELKRK
Ga0222713_100781224	3300021962	Estuarine Water	MKAYQETTKDWVGDVANHIYYLSDDKRKLYAFYNVNTGSVKTFKKPIGFDPRYRTFKELKRK
Ga0222713_106278991	3300021962	Estuarine Water	MKAFQETTKDWTGDVSNHIYYLSDDKRKLHAFYNVDTGLVKKFNKPIGFDPRYRTFKELRRK
Ga0222712_100040497	3300021963	Estuarine Water	MRALQETTSDWIHKVSNHIYYVTNDRSKLVAFYNIDTKEVKKFSKPLPFYTKYRTFKELK
Ga0222712_1001248817	3300021963	Estuarine Water	MRVFQETTPDWVGNVSNHIYYLTDDKSKMVAFYNVDSGVVKKFIKPIRFDMRYRKFK
Ga0222712_106157992	3300021963	Estuarine Water	MKVFQETTKDWVGNVSNHIYYLSDDKRKLHAFYNVDTGLVKKFNKPIGFDPRYRTFKELRRK
Ga0222712_106966581	3300021963	Estuarine Water	MRVLQETTKDWSQKVSNHIYYVNDDRSKLIAFYNIDTKTVKKFSKPLPFYTKYRTFKELK
Ga0181351_11061324	3300022407	Freshwater Lake	MRAFQETTKDWAHPCPNHIYYLTDDKSKMVAFYNVNTGEVKKFSKPIRFD
Ga0236341_10021837	3300022591	Freshwater	MRAFQEITPDWVGNVTNHIYYLTDNKEKMVAFYNVNTGEVKKFIKPIRFDMRYRKFKELKHK
Ga0248169_10323619	3300022602	Freshwater	MRAFQETTKDWVGNVTNHIYYLTDNKEKLVAFYNVNTGVVKKFKKPIRFDMRYRTFKELKHK
Ga0228701_1000041247	3300022746	Freshwater	MRVLQETTKDWSQKVSNHIYYVTDDKCKLVAFYNVDTKTTKKFSKPLPFYTKYRTFKELK
Ga0214921_105392572	3300023174	Freshwater	MRVFQEITPDWVGNVTNHIYYLTDDKSKMVAFYNVNTGEVKKFINPIRFDMRYRKFKELKHK
Ga0214919_100177196	3300023184	Freshwater	MKAFVETTKDWSTPVSNHIYYLSDDKRKMYAFYNIDTKTVKTFIKPIGFDPRYRTFKELKRK
Ga0244775_101016923	3300024346	Estuarine	MKAFQETTKDWVGNVSNHIYYLSDDKRKLYAFYNVSTKKVTKLKKPIGFDPRYRTFKELK
Ga0244775_109022082	3300024346	Estuarine	MRALQETTSDWSHKVSNHIYYVTNDRSKLVAFYNVDTKTTKKFSKPLPFYTKYRTFKELK
Ga0244775_109442482	3300024346	Estuarine	MRVFQETTKDWVGNVSNHIYYLTDDKSKMVAFYNVDTKQVKKFIKPIRIDMRYRTFKELK
Ga0244776_101233923	3300024348	Estuarine	MRVFQETTKDWSVKCPNHIYLLTDDKSKMVAFYNVDTKKVTKFSKPIRFDTRYRTFKELK
Ga0256332_11277741	3300024484	Freshwater	MKAFQETTKDWVGNVSNHIYYLSDDKRKLYAFYNVDTGLVKKFNKPIGFDPRYRTFKELRRKXISMFFXMS
Ga0255283_10698111	3300024557	Freshwater	MKAFQETTKDWVGDVSNHIYYLSDDKRKLYAFYNVDTGLVKKFNKPIGFDPRYRTFKELRRK
Ga0256336_10045594	3300024562	Freshwater	MKAFQETTKDWVGNVSNHIYYLSDDKRKLYAFYNVDTGLVKKFNKPIGFDPRYRIFKELRRK
Ga0255238_11319861	3300024568	Freshwater	MKAFQETTKDWVGNVSNHIYYLSDDKRKLYAFYNVDTGLVKKFTKPIGFDPRYRT
Ga0255277_10176522	3300026569	Freshwater	MKAFQETTKDWVGNVSNHIYYLSDDKRKMYAFYNVDTGLVKKFNKPIGFDPRYRTFKELRRK
Ga0255274_11240361	3300026570	Freshwater	MKAFQETTKDWVGNVSNHIYYLSDDKRKLYAFYNVDTGLVKKFNKPIGFDPRYRTFKEL
Ga0255078_10903982	3300027156	Freshwater	MRVFQETTPDWVGNVSNHIYYLTDDKSKMVAFYNVDSGVVKKFIKPIRFDMRYRKFKELKHK
Ga0208165_10392202	3300027218	Estuarine	PLWLLQENRMRVFQETTPDWVGNVSNHIYYLTDDKSKMVAFYNVDTGVVKKFIKPIRFDMRYRKFKELKHK
Ga0208178_10322713	3300027259	Estuarine	MRVFQETTPDWVGNVSNHIYYLTDDKSKMVAFYNVDTGVVKKFIKPIRFDMRYRKFKELKHKR
Ga0208933_10041584	3300027261	Estuarine	ETTPDWVGNVSNHIYYLTDDKSKMVAFYNVDTGVVKKFIKPIRFDMRYRKFKELKHK
Ga0208439_10189121	3300027278	Estuarine	ETTKDWAVKCPNHIYLLTDDKSKMVAFYNVDTKKVTKFSKPIRFDTRYRTFKELK
Ga0208439_10222434	3300027278	Estuarine	MRVFQETTKDWAVKCPNHIYLLTDDKSKMVAFYNVDTKKVTKFSKPIRFD
Ga0255128_10884422	3300027336	Freshwater	MKAFQETTSDWSGNVSNHIYYLTDDKAKMVAFYNVDTGRITKFKKPIRFDTRYRKFKELKHKXISMHS
Ga0208966_10551954	3300027586	Freshwater Lentic	MKAFLETTKDWSHPCPNHIYYLTDDKSKLVAFYNVVTNKVTKMSKPIRFDTRYRTFKELKQK
Ga0255088_10537881	3300027597	Freshwater	MKAFQETTKDWVGNVSNHIYYLSDDKRKMYAFYNVDTGLVKKFNKPIGFDPRYRTFKELR
Ga0208974_10120662	3300027608	Freshwater Lentic	MKAFVETTKDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKKFIKPIGFDPRFRTFKELKRK
Ga0208974_10982092	3300027608	Freshwater Lentic	MRVFQEITNDWVGNVTNHIYYLTDDKSKMVAFYNMDTKQVKKFIKPIRFDMRYRRFKELKHK
Ga0208975_10246523	3300027659	Freshwater Lentic	LLSENRMRVFQEITNDWVGNVTNHIYYLTDDKSKMVAFYNMDTKQVKKFIKPIRFDMRYRRFKELKHK
Ga0208975_11184142	3300027659	Freshwater Lentic	WTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKKFIKPIAFDPRYRTFKELKRK
Ga0209769_12306161	3300027679	Freshwater Lake	PLLLAWSSLWLLQESSMRVFQETTDWKEHGVPNHIYYTSDSKSKIYAFYNTVTGEIKKFSKPIRWDMRYRTFKELKHK
Ga0209188_100038026	3300027708	Freshwater Lake	MRAFQETTKDWVGNVSNHIYYLTDDKSKMVAFYNVDTKQVKKFIKPIRFDMRYRTFKELKHK
Ga0209188_10261705	3300027708	Freshwater Lake	LLLVWLALWLSQGSGMRVFQEITPDWVGNVANHIYYLTDNKEKMVAFYNVDTGEVKKFSQPIRFDKRYRTFKELKRK
Ga0209188_10297464	3300027708	Freshwater Lake	MRAFQETTSTWTSNVTNHIYYLNDTKEFMVAFYNVNTGEVKKFSKRIKFDMRHRTFKELKHK
Ga0209442_10003203	3300027732	Freshwater Lake	MKAFVETTKDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKTFIKPIGFDPRYRTFKELKRK
Ga0209189_11999832	3300027747	Freshwater Lake	MRVFQETTSDWVGNVTNHIYYLTDDKSKMVAFYNVNTGEVKKFIKPIRFDMRYRKFKELKHK
Ga0209500_100313987	3300027782	Freshwater Lake	MRVFKEITKDWVGNVSNHIYYLTDDKSKMVAFYNVDTKQVKKFIKPIRIDMRYRTFKELK
Ga0209500_101267112	3300027782	Freshwater Lake	MRVFQETTKDWVGNVTNHIYYLTDNKEKMVAFYNVNTKQIKKFIKPIRFDTRRRTFKELKHI
Ga0209353_100882033	3300027798	Freshwater Lake	MRAFQETTKDWVGNVSNHIYYLTDDKSKMVAFYNVDTKQIKKFIKPIRFDMRYRTFKELKHK
Ga0209354_102751702	3300027808	Freshwater Lake	RLLSESIMRAFQETTKDWVGNVSNHIYYLTDDKSKMVAFYNVDTKQIKKFIKPIRFDMRYRTFKELKHK
Ga0304728_11750262	3300028393	Freshwater Lake	MRAFQETTKDWVGKVSNHIYYLTDDKSKMVAFYNVDTKQIKKFIKPIRFDMRYRTFKELKHK
Ga0315907_101317512	3300031758	Freshwater	MKAFVETTKDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKKFIKPIAFDPRYRTFKELKRK
Ga0315909_103121761	3300031857	Freshwater	TTKDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKKFIKPIGFDPRFRTFKELKRK
Ga0316220_11611351	3300031884	Freshwater	MRAFQETTKDWVGNVTNHIYYLTDNKEKLVAFYNVNTGVVKKFKKPIRFDMRYRT
Ga0315906_100446625	3300032050	Freshwater	MKAFVETTKDWTTPVSNHIYYLSDDKRKMYAFYNIDTQTVKKFIKPIAFDPRFRTFKELKRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085212

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences