NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F075676

Metagenome Family F075676

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F075676
Family Type Metagenome
Number of Sequences 118
Average Sequence Length 55 residues
Representative Sequence MRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKISTYLGGLTIPAP
Number of Associated Samples 57
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 85.59 %
% of genes near scaffold ends (potentially truncated) 29.66 %
% of genes from short scaffolds (< 2000 bps) 77.12 %
Associated GOLD sequencing projects 54
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (87.288 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(44.915 % of family members)
Environment Ontology (ENVO) Unclassified
(55.932 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(74.576 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 60.71%    β-sheet: 0.00%    Coil/Unstructured: 39.29%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF07811TadE 12.62
PF00482T2SSF 11.65
PF01478Peptidase_A24 2.91
PF00072Response_reg 1.94
PF16976RcpC 1.94
PF13384HTH_23 0.97
PF11967RecO_N 0.97


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A87.29 %
All OrganismsrootAll Organisms12.71 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003432|JGI20214J51088_10995977Not Available551Open in IMG/M
3300003541|JGI20214J51650_10798855Not Available660Open in IMG/M
3300003891|Ga0063011_10052488Not Available532Open in IMG/M
3300004048|Ga0055494_10049335Not Available805Open in IMG/M
3300004155|Ga0066600_10026684Not Available1882Open in IMG/M
3300005839|Ga0068707_1041878Not Available2194Open in IMG/M
3300005839|Ga0068707_1054092Not Available1783Open in IMG/M
3300008002|Ga0100390_10523215Not Available529Open in IMG/M
3300009037|Ga0105093_10953223Not Available507Open in IMG/M
3300009075|Ga0105090_10512664Not Available729Open in IMG/M
3300009131|Ga0115027_10420395Not Available940Open in IMG/M
3300009455|Ga0114939_10505523Not Available530Open in IMG/M
3300009503|Ga0123519_10195010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_161421Open in IMG/M
3300009783|Ga0116158_10029592Not Available4078Open in IMG/M
3300010302|Ga0116202_10435194Not Available583Open in IMG/M
3300010342|Ga0116252_10263907Not Available1035Open in IMG/M
3300010355|Ga0116242_10004048All Organisms → cellular organisms → Bacteria26202Open in IMG/M
3300013090|Ga0163209_1162183Not Available768Open in IMG/M
3300013090|Ga0163209_1162183Not Available768Open in IMG/M
3300013090|Ga0163209_1211138Not Available666Open in IMG/M
3300013090|Ga0163209_1319065Not Available532Open in IMG/M
3300013091|Ga0163210_1231668Not Available651Open in IMG/M
(restricted) 3300013123|Ga0172368_10082196Not Available1952Open in IMG/M
(restricted) 3300013123|Ga0172368_10087004Not Available1873Open in IMG/M
(restricted) 3300013123|Ga0172368_10101924Not Available1670Open in IMG/M
(restricted) 3300013123|Ga0172368_10139622All Organisms → Viruses → Predicted Viral1330Open in IMG/M
(restricted) 3300013123|Ga0172368_10143299Not Available1305Open in IMG/M
(restricted) 3300013123|Ga0172368_10143299Not Available1305Open in IMG/M
(restricted) 3300013123|Ga0172368_10402557Not Available617Open in IMG/M
(restricted) 3300013123|Ga0172368_10535905Not Available504Open in IMG/M
(restricted) 3300013125|Ga0172369_10025852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin3255224Open in IMG/M
(restricted) 3300013125|Ga0172369_10088704Not Available2076Open in IMG/M
(restricted) 3300013125|Ga0172369_10219349Not Available1071Open in IMG/M
(restricted) 3300013125|Ga0172369_10219349Not Available1071Open in IMG/M
(restricted) 3300013125|Ga0172369_10251746Not Available968Open in IMG/M
(restricted) 3300013125|Ga0172369_10383126Not Available712Open in IMG/M
(restricted) 3300013125|Ga0172369_10395690Not Available696Open in IMG/M
(restricted) 3300013136|Ga0172370_10020383All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin3256584Open in IMG/M
(restricted) 3300013136|Ga0172370_10087084Not Available2277Open in IMG/M
(restricted) 3300013136|Ga0172370_10390117Not Available769Open in IMG/M
(restricted) 3300013136|Ga0172370_10458883Not Available685Open in IMG/M
(restricted) 3300013136|Ga0172370_10463796Not Available679Open in IMG/M
(restricted) 3300013136|Ga0172370_10536422Not Available613Open in IMG/M
(restricted) 3300013136|Ga0172370_10559485Not Available595Open in IMG/M
(restricted) 3300013137|Ga0172375_10121751All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium2197Open in IMG/M
(restricted) 3300013137|Ga0172375_10460834Not Available859Open in IMG/M
(restricted) 3300013137|Ga0172375_10460834Not Available859Open in IMG/M
(restricted) 3300013137|Ga0172375_10873466Not Available547Open in IMG/M
(restricted) 3300013138|Ga0172371_10343855Not Available1150Open in IMG/M
(restricted) 3300013138|Ga0172371_10514601Not Available860Open in IMG/M
(restricted) 3300013138|Ga0172371_10655798Not Available721Open in IMG/M
(restricted) 3300013138|Ga0172371_10687951Not Available696Open in IMG/M
(restricted) 3300013138|Ga0172371_10791626Not Available629Open in IMG/M
(restricted) 3300013138|Ga0172371_10903429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-1571Open in IMG/M
3300020074|Ga0194113_10005179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi16857Open in IMG/M
3300020074|Ga0194113_10032075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi5451Open in IMG/M
3300020074|Ga0194113_10032075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi5451Open in IMG/M
3300020074|Ga0194113_10096956Not Available2600Open in IMG/M
3300020074|Ga0194113_10143058Not Available2000Open in IMG/M
3300020074|Ga0194113_10143058Not Available2000Open in IMG/M
3300020074|Ga0194113_10171701Not Available1772Open in IMG/M
3300020074|Ga0194113_10171701Not Available1772Open in IMG/M
3300020074|Ga0194113_10190702Not Available1653Open in IMG/M
3300020074|Ga0194113_10190702Not Available1653Open in IMG/M
3300020074|Ga0194113_10373174Not Available1056Open in IMG/M
3300020074|Ga0194113_10373174Not Available1056Open in IMG/M
3300020074|Ga0194113_10586368Not Available788Open in IMG/M
3300020083|Ga0194111_10054397Not Available3495Open in IMG/M
3300020083|Ga0194111_10313462Not Available1074Open in IMG/M
3300020084|Ga0194110_10046897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_163947Open in IMG/M
3300020221|Ga0194127_10120870Not Available1915Open in IMG/M
3300020222|Ga0194125_10211811Not Available1374Open in IMG/M
3300021074|Ga0194044_10364067Not Available542Open in IMG/M
3300021075|Ga0194063_10027368All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium2870Open in IMG/M
3300021075|Ga0194063_10027368All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium2870Open in IMG/M
3300021473|Ga0194043_1199987Not Available667Open in IMG/M
(restricted) 3300023177|Ga0233423_10021538Not Available2837Open in IMG/M
(restricted) 3300023177|Ga0233423_10021538Not Available2837Open in IMG/M
(restricted) 3300023177|Ga0233423_10181360Not Available900Open in IMG/M
(restricted) 3300023177|Ga0233423_10494675Not Available519Open in IMG/M
(restricted) 3300023208|Ga0233424_10320249Not Available595Open in IMG/M
(restricted) 3300024054|Ga0233425_10009115All Organisms → cellular organisms → Bacteria12763Open in IMG/M
(restricted) 3300024054|Ga0233425_10009115All Organisms → cellular organisms → Bacteria12763Open in IMG/M
(restricted) 3300024300|Ga0233420_10007356Not Available3465Open in IMG/M
(restricted) 3300024300|Ga0233420_10007356Not Available3465Open in IMG/M
(restricted) 3300024300|Ga0233420_10136044Not Available819Open in IMG/M
(restricted) 3300024300|Ga0233420_10219875Not Available645Open in IMG/M
(restricted) 3300024333|Ga0233422_10038192Not Available1835Open in IMG/M
(restricted) 3300024333|Ga0233422_10044134Not Available1706Open in IMG/M
(restricted) 3300024341|Ga0233421_10245336Not Available636Open in IMG/M
3300025136|Ga0209610_1078870Not Available1134Open in IMG/M
3300025882|Ga0209097_10329573Not Available594Open in IMG/M
3300026293|Ga0209227_1083252Not Available971Open in IMG/M
3300027841|Ga0209262_10077097Not Available1539Open in IMG/M
3300027841|Ga0209262_10077097Not Available1539Open in IMG/M
3300027863|Ga0207433_10614754Not Available606Open in IMG/M
3300027885|Ga0209450_10565650Not Available831Open in IMG/M
3300027885|Ga0209450_11034887Not Available580Open in IMG/M
3300027887|Ga0208980_10287427Not Available954Open in IMG/M
3300027887|Ga0208980_10319642Not Available899Open in IMG/M
3300027897|Ga0209254_10290315Not Available1256Open in IMG/M
(restricted) 3300029286|Ga0247841_10591889Not Available689Open in IMG/M
(restricted) 3300029286|Ga0247841_10844720Not Available538Open in IMG/M
3300031463|Ga0272448_1086305Not Available2077Open in IMG/M
3300031834|Ga0315290_11154793Not Available645Open in IMG/M
3300031873|Ga0315297_10129468Not Available2032Open in IMG/M
3300031873|Ga0315297_10129468Not Available2032Open in IMG/M
3300031873|Ga0315297_10863247Not Available753Open in IMG/M
3300032143|Ga0315292_11167444Not Available634Open in IMG/M
3300032156|Ga0315295_11250639Not Available726Open in IMG/M
3300032164|Ga0315283_10495434Not Available1327Open in IMG/M
3300032164|Ga0315283_11144865Not Available815Open in IMG/M
3300032177|Ga0315276_10454678Not Available1374Open in IMG/M
3300032177|Ga0315276_12043517Not Available584Open in IMG/M
3300032256|Ga0315271_11966103Not Available500Open in IMG/M
3300032342|Ga0315286_10436368Not Available1372Open in IMG/M
3300033557|Ga0316617_101432130Not Available695Open in IMG/M
3300034128|Ga0370490_0274547Not Available558Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater44.92%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake15.25%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment10.17%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater3.39%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland3.39%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge3.39%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment2.54%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater2.54%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.69%
Anoxic Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water1.69%
Hot SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring1.69%
Anoxygenic And ChlorotrophicEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic1.69%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.85%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.85%
AquiferEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer0.85%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.85%
Anoxygenic And Chlorotrophic Microbial MatEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic Microbial Mat0.85%
Hot Spring SedimentsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediments0.85%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.85%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.85%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.85%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003432Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003541Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003891Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing sample CP Core 1 1cmEnvironmentalOpen in IMG/M
3300004048Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2EnvironmentalOpen in IMG/M
3300004155Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11EnvironmentalOpen in IMG/M
3300005839Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP NP MetaGEnvironmentalOpen in IMG/M
3300008002Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-14EnvironmentalOpen in IMG/M
3300009037Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009075Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009455Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal SpringEnvironmentalOpen in IMG/M
3300009503Hot spring microbial communities from Yellowstone National Park - Yellowstone National Park OP-RAMG-02EnvironmentalOpen in IMG/M
3300009783Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC052_MetaGEngineeredOpen in IMG/M
3300010302Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 325m metaGEnvironmentalOpen in IMG/M
3300010342AD_JPNAca1EngineeredOpen in IMG/M
3300010355AD_USDVcaEngineeredOpen in IMG/M
3300013090Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_160mEnvironmentalOpen in IMG/M
3300013091Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_220mEnvironmentalOpen in IMG/M
3300013123 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11mEnvironmentalOpen in IMG/M
3300013125 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.25mEnvironmentalOpen in IMG/M
3300013136 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.5mEnvironmentalOpen in IMG/M
3300013137 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1mEnvironmentalOpen in IMG/M
3300013138 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_12mEnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020083Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300mEnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300020221Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100mEnvironmentalOpen in IMG/M
3300020222Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250mEnvironmentalOpen in IMG/M
3300021074Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-17mEnvironmentalOpen in IMG/M
3300021075Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L373-20mEnvironmentalOpen in IMG/M
3300021473Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-15mEnvironmentalOpen in IMG/M
3300023177 (restricted)Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_112_MGEnvironmentalOpen in IMG/M
3300023208 (restricted)Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MGEnvironmentalOpen in IMG/M
3300024054 (restricted)Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_140_MGEnvironmentalOpen in IMG/M
3300024300 (restricted)Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_102_MGEnvironmentalOpen in IMG/M
3300024333 (restricted)Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_110_MGEnvironmentalOpen in IMG/M
3300024341 (restricted)Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_107_MGEnvironmentalOpen in IMG/M
3300025136Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025882Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC052_MetaG (SPAdes)EngineeredOpen in IMG/M
3300026293Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant NP 2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027841Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)EnvironmentalOpen in IMG/M
3300027863Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01 (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300027897Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)EnvironmentalOpen in IMG/M
3300029286 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_18mEnvironmentalOpen in IMG/M
3300031463Hot spring sediment microbial communities from Yellowstone National Park, WY, United States - YNP-CB-019-1EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300034128Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI20214J51088_1099597723300003432WetlandMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGTVAAWLGGLTIPAP*
JGI20214J51650_1079885513300003541WetlandMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP*
Ga0063011_1005248813300003891Hot Spring SedimentsVRLIISQKGAELSEIVAGLLVVLVAGVAATQVMFNGLDSAASKISSWLDSLTIPAP*
Ga0055494_1004933513300004048Natural And Restored WetlandsMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGTVAAWLGGLTIPAP
Ga0066600_1002668433300004155FreshwaterMRFFKSQRGAELSEIVAGLLVVLVAGVAATGVMFNGLDTAAGKISTYLGGLTIPTP*
Ga0068707_104187813300005839Anoxygenic And ChlorotrophicVRLIISQKGAELSEIVAGLLVVLVAGIAATQVMFNGLDTAASKISSWLDSLTIPAP*
Ga0068707_105409223300005839Anoxygenic And ChlorotrophicMRFFKSQRGAELSEIVAGLLVVLVAGIAATSVMFNGLDDAAQKISTYLGGLTIPAP*
Ga0100390_1052321513300008002AquiferMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP*
Ga0105093_1095322313300009037Freshwater SedimentMFKSQRGAELSEIVAGLLVVLVAGVAATSIMFNGLDTAAGTVSAWLG
Ga0105090_1051266423300009075Freshwater SedimentMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGTVVAWLGGLTIAA
Ga0115027_1042039513300009131WetlandMFKSQRGAELSEIVAGLLVVLVAGVAATSIMFNGLDTAAGTVSGWLGGLTIPAP*
Ga0114939_1050552313300009455GroundwaterMFKSQRGAELSEIVAGLLVVLVAGVAATSIMFNGLDTAAGTVSAWLGGLTIPAP*
Ga0123519_1019501013300009503Hot SpringVRLIISQKGAELSEIVAGLLVVLVAGVAATQVMFNGLDSAASKISSYLGGLTIPAP*
Ga0116158_1002959253300009783Anaerobic Digestor SludgeMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAAKISTYLGGLTIPAP*
Ga0116202_1043519433300010302Anoxic Lake WaterMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAATKISTFLGGLTIPAP*
Ga0116252_1026390733300010342Anaerobic Digestor SludgeMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKISTYLGGLTIPAP*
Ga0116242_1000404853300010355Anaerobic Digestor SludgeMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAAKISTYLGGLTIPAP*
Ga0163209_116218323300013090FreshwaterMRFFKSQRGAELSELVAGLLVVLVAGVAATSVMFNGLDTAASKISTYLGGLTIPTP*
Ga0163209_116218333300013090FreshwaterMFKSQRGAELAEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP*
Ga0163209_121113823300013090FreshwaterMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTI
Ga0163209_131906513300013090FreshwaterMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDSAATKISSYLGGLTIPAP*
Ga0163210_123166813300013091FreshwaterQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAATKISTFLGGLTIPTP*
(restricted) Ga0172368_1008219633300013123FreshwaterMRFFNSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKISTYLGGLTIPAP*
(restricted) Ga0172368_1008700433300013123FreshwaterMRFFKSQRGAELSEIIAGLLVVLVAGVAATSVMFNGLDSAATKISSYLGGLTIPAP*
(restricted) Ga0172368_1010192433300013123FreshwaterMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDSAATKISSYLGGLTIPAP*
(restricted) Ga0172368_1013962233300013123FreshwaterMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDSAATKISTFLGGLTIPAP*
(restricted) Ga0172368_1014329933300013123FreshwaterMRFFKSQHGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAASKISTFLGGLTIPAP*
(restricted) Ga0172368_1014329943300013123FreshwaterMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVTFNGLDTAAGTVSGWLGGLTIPAP*
(restricted) Ga0172368_1040255723300013123FreshwaterMRFFQSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDAAATKISSYLGGLTIPAP*
(restricted) Ga0172368_1053590523300013123FreshwaterMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAAKISTYLGGLTIPAP*
(restricted) Ga0172369_1002585213300013125FreshwaterMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPA
(restricted) Ga0172369_1008870413300013125FreshwaterMFKSQRGAELSEIVAGLLVVLVAGVAATSIMFNGLDTAAGTVSGWLGGLTIPAP
(restricted) Ga0172369_1021934933300013125FreshwaterMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDAAATKISSYLGGLTIPAP*
(restricted) Ga0172369_1021934943300013125FreshwaterMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKISTYLGGLTIPAP*
(restricted) Ga0172369_1025174623300013125FreshwaterMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWL
(restricted) Ga0172369_1038312613300013125FreshwaterRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP*
(restricted) Ga0172369_1039569013300013125FreshwaterMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPA
(restricted) Ga0172370_1002038343300013136FreshwaterMRFFKSQRGAELSELVAGLLVVLVAGVAATSVMFNGLDSAATKISSYLGGLTIPAP*
(restricted) Ga0172370_1008708433300013136FreshwaterMFKSQRGAELSEIVAGLLVVLVAGVAATSIMFNGLATAAGTVSGWLGGLAILAPWTDRGQE*
(restricted) Ga0172370_1039011713300013136FreshwaterMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGG
(restricted) Ga0172370_1045888313300013136FreshwaterAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP*
(restricted) Ga0172370_1046379623300013136FreshwaterMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWIGGLTIPAP*
(restricted) Ga0172370_1053642213300013136FreshwaterTQSSTVEVSSMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP*
(restricted) Ga0172370_1055948533300013136FreshwaterMRFFKSQRGAELSELVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWIGGLTIPAP*
(restricted) Ga0172375_1012175153300013137FreshwaterLSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP*
(restricted) Ga0172375_1046083413300013137FreshwaterELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP*
(restricted) Ga0172375_1046083423300013137FreshwaterMRFLKSQRGAELSEIIAGLLVVLVAGVAATSVMFNGLDSAATKISSYLGGLTIPAP*
(restricted) Ga0172375_1087346613300013137FreshwaterVRFFKSQRGAELSEIVAGLLVVLVAGVAAISIMFNGLDTAAGKISTFLGGLTIPAP*
(restricted) Ga0172371_1034385523300013138FreshwaterMFKSQRGAELSEIIAGLLVVLVAGVAATSVMFNGLDSAATKISSYLGGLTIPAP*
(restricted) Ga0172371_1051460113300013138FreshwaterKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP*
(restricted) Ga0172371_1065579823300013138FreshwaterMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVAT
(restricted) Ga0172371_1068795133300013138FreshwaterFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP*
(restricted) Ga0172371_1079162613300013138FreshwaterVRFFKSQRGAELSEIVAGLLVVLVAGVAAISIMFNGLDTAATKISTFLGGLTIPAP*
(restricted) Ga0172371_1090342913300013138FreshwaterMRFLNSQRGAELSELVAGLLVVLVAGVAATSVMFNGLDTAASKVATWIGGLTIPAP*
Ga0194113_10005179123300020074Freshwater LakeMRMFKSERGAELSEIVAGLLVVLVAGVAATSVMFNGLDSAATKISSYLGGLTIPAP
Ga0194113_1003207533300020074Freshwater LakeMRLFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP
Ga0194113_1003207543300020074Freshwater LakeMRFLKSQRGAELSELVAGLLVVLVAGVAATSVMFNGLDTAASKVATWIGGLTIPAP
Ga0194113_1009695663300020074Freshwater LakeMRFFKSQRGAELSEIVAGLLVVLVAGVAAISVMFNGLDSAATKISSYLGGLTIPAP
Ga0194113_1014305813300020074Freshwater LakeSSMRLFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP
Ga0194113_1014305823300020074Freshwater LakeMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWIGGLTIPAP
Ga0194113_1017170133300020074Freshwater LakeMRFFKSQRGAELSELVAGLLVVLVAGVAATSVMFNGLDSAATKISSYLGGLTIPAP
Ga0194113_1017170143300020074Freshwater LakeMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP
Ga0194113_1019070213300020074Freshwater LakeMRMFKSQRGAELSELVAGLLVVLVAGIAATSVMFNGLDTAASKIATFIGGLTIPAP
Ga0194113_1019070223300020074Freshwater LakeMRMFKSQRGAELSEIVAGLLVVLVAGIAATSVMFNGLDTAASKISTFLGGLTIPAP
Ga0194113_1037317413300020074Freshwater LakeEVSSMRMFKSQRGAELSEIVAGLLVVLVAGIAATSVMFNGLDTAAAKISTYLGGLTIPAP
Ga0194113_1037317423300020074Freshwater LakeMRFFRSQRGAELSEIVAGLLVVLVAGIAATSVMFNGLDTAASKISTFLGGLTIPAP
Ga0194113_1058636833300020074Freshwater LakeMRFCKSQRGAELSELVAGLLVVLVAGVAATSVMFNGLDAAATKISSYLGGLTIPAP
Ga0194111_1005439763300020083Freshwater LakeMRFFKSQRGAELSEIIAGLLVVLVAGVAATSVMFNGLDSAATKISSYLGGLTIPAP
Ga0194111_1031346223300020083Freshwater LakeMRMFKSQRGAELSEIVAGLLVVLVAGIAATSVMFNGLDTAAAKISTYLGGLTIPAP
Ga0194110_1004689733300020084Freshwater LakeMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDSAAAKISSYLGGLTIPAP
Ga0194127_1012087053300020221Freshwater LakeMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATFFGGLTIPAP
Ga0194125_1021181143300020222Freshwater LakeRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIPAP
Ga0194044_1036406713300021074Anoxic Zone FreshwaterVHLLNSQRGAELSEIVVGLLVILVAGVAAVNIMFNGLDDAATKISAYITGLTIPAP
Ga0194063_1002736873300021075Anoxic Zone FreshwaterMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAASKISTYLGGLTIPTP
Ga0194063_1002736883300021075Anoxic Zone FreshwaterMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGTVAAWLGGLTVPAP
Ga0194043_119998733300021473Anoxic Zone FreshwaterVHLLNSQRGAELSEIVVGLLVILVAGVAATSIMFNGLDNAATKIATYIGALTIPQP
(restricted) Ga0233423_1002153843300023177FreshwaterMRLFKSQRGAELSEIVAGLLVVLVAGIAATSVMFNGLDTAAAKIATFIGGLTIPAP
(restricted) Ga0233423_1002153853300023177FreshwaterMRFFQSQRGAELSEIVAGLLVVLVAGIAATSVMFNGLDTAASKINTFLGGLTIPAP
(restricted) Ga0233423_1018136013300023177FreshwaterMRLFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLTIP
(restricted) Ga0233423_1049467523300023177FreshwaterMRFFKSQRGAELSELVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWIGGLTIPAP
(restricted) Ga0233424_1032024923300023208FreshwaterMRMFKSQRGAELSEIVAGLLVVLVAGIAATSVMFNGLDTAAGKVATWLGGLTIPAP
(restricted) Ga0233425_1000911563300024054FreshwaterMRFFMSQRGAELSEIVAGLLVVLVAGVVATSVMFNGLDTAAGKISTYLGGLTIPAP
(restricted) Ga0233425_1000911573300024054FreshwaterMRMFKSQRGAELSEIVAGLLVVLVAGVAATSIMFNGLDTAAGTVSAWLGGLTIPAP
(restricted) Ga0233420_1000735643300024300FreshwaterMRFFKSQRGAELSEIVAGLLVVLVAGIAATSVMFNGLDTAASKINTFLGGLTIPAP
(restricted) Ga0233420_1000735653300024300FreshwaterMRLFKSQRGAELSEIVAGLLVVLVAGIAATSVMFNGLDTAASKIATFIGGLTIPAP
(restricted) Ga0233420_1013604433300024300FreshwaterMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDSAATKISSYLGGLTIPAP
(restricted) Ga0233420_1021987523300024300FreshwaterMRFLNSQRGAELSELVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWIGGLTIPAP
(restricted) Ga0233422_1003819243300024333FreshwaterMRLFKSQRGAELSEIVAGLLVVLVAGIAATSVMFNGLDTAAAKISTYISGLTIPAP
(restricted) Ga0233422_1004413423300024333FreshwaterMRFLNSQRGAELSELVAGLLVVLVAGVAATSVMFNGLDTAASKVATWIGGLTIPAP
(restricted) Ga0233421_1024533623300024341FreshwaterMRMFKSQRGAELSEIVAGLLVVMVAGVAATSVMFNGLDTAAGKVATWLGGLTIP
Ga0209610_107887013300025136Anoxic Lake WaterMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAATKISTFLGGLTIPAP
Ga0209097_1032957323300025882Anaerobic Digestor SludgeMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAAKISTYLGGLTIPAP
Ga0209227_108325223300026293Anoxygenic And Chlorotrophic Microbial MatMRFFKSQRGAELSEIVAGLLVVLVAGIAATSVMFNGLDDAAQKISTYLGGLTIPAP
Ga0209262_1007709723300027841FreshwaterMRMFKSQRGAELSEIVAGLLDVLVAGVAATSVMFNGLDTAAGTVAAWLGGLTIPAP
Ga0209262_1007709733300027841FreshwaterMRFFKSQRGAELSEIVAGLLVVLVAGVAATGVMFNGLDTAAGKISTYLGGLTIPTP
Ga0207433_1061475413300027863Hot SpringMRLIRSQKGAELSEIVAGLLVVLVAGIAATQVMFNGLDTAASKISSWLGGLTIPAP
Ga0209450_1056565033300027885Freshwater Lake SedimentMRFLKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAANKISTYLGGLTIPTP
Ga0209450_1103488713300027885Freshwater Lake SedimentMRLFKSQRGAELSEIVAGLLVVLVAGVAATSIMFNGLDTAAGTVAAWLGGLTIPAP
Ga0208980_1028742713300027887WetlandFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAANKISTYLGGLTIPTP
Ga0208980_1031964213300027887WetlandMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVATWLGGLT
Ga0209254_1029031513300027897Freshwater Lake SedimentMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAANKISTYLGGLTIPTP
(restricted) Ga0247841_1059188913300029286FreshwaterMRFLRSTRGAEMSEVIAGLLVILVAGVAAVSVMFDGLDTAANKISTWLGGLNIGTP
(restricted) Ga0247841_1084472013300029286FreshwaterMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAATKISTFLG
Ga0272448_108630513300031463SedimentMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDDAAQKISTYLGGLTIPAP
Ga0315290_1115479313300031834SedimentMRFFKSQRGAELSEIVAGLLVVLVAGVAATGVMFNGLDTAAGKISTYLGGLTI
Ga0315297_1012946813300031873SedimentSMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGTVAAWLGGLTIPAP
Ga0315297_1012946823300031873SedimentMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAANKISTYLGGLTIPAP
Ga0315297_1086324723300031873SedimentMRMFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKVAT
Ga0315292_1116744413300032143SedimentMRFFTSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAATKISTYLGGLTIPTP
Ga0315295_1125063923300032156SedimentMRFFKSQRGAELSEIVAGLLVVLVAGGAATGVMFNGLDTAAGKISTYLGGLTIPTP
Ga0315283_1049543423300032164SedimentMRFFKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAAGKISTYLGGLTIPTP
Ga0315283_1114486533300032164SedimentMRFIKSQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAANKISTYLGGLTIPTP
Ga0315276_1045467813300032177SedimentRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAANKISTYLGGLTIPTP
Ga0315276_1204351733300032177SedimentQRGAELSEIVAGLLVVLVAGVAATSVMFNGLDTAATKISTFLGGLTIPAP
Ga0315271_1196610333300032256SedimentFFKSQRGAELSEIVAGLLVVLVAGVAATGVMFNGLDTAAGKISTYLGGLTIPTP
Ga0315286_1043636843300032342SedimentMRMFKSQRGAELSEIVAGLLVVLVAGVAATSIMFNGLDTAAGTVAAWLGGLTIPAP
Ga0316617_10143213013300033557SoilMRMFKSQRGAELSEIVAGLLVVLVAGVAATSIMFNGLDTAAGTVSGWLGGLTI
Ga0370490_0274547_309_4733300034128Untreated Peat SoilMFKSQRGAELSEIVAGLLVVLVAGVAATSIMFNGLDTAAGTVAAWLGGLTIPAP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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