Basic Information | |
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Family ID | F074468 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 119 |
Average Sequence Length | 50 residues |
Representative Sequence | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPDEWKP |
Number of Associated Samples | 103 |
Number of Associated Scaffolds | 119 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 100.00 % |
% of genes near scaffold ends (potentially truncated) | 93.28 % |
% of genes from short scaffolds (< 2000 bps) | 89.92 % |
Associated GOLD sequencing projects | 97 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.35 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (81.513 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (19.328 % of family members) |
Environment Ontology (ENVO) | Unclassified (41.176 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (87.395 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 4.05% β-sheet: 13.51% Coil/Unstructured: 82.43% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.35 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 119 Family Scaffolds |
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PF11246 | Phage_gp53 | 84.87 |
PF12322 | T4_baseplate | 1.68 |
PF08722 | Tn7_TnsA-like_N | 1.68 |
PF05496 | RuvB_N | 0.84 |
PF11056 | UvsY | 0.84 |
COG ID | Name | Functional Category | % Frequency in 119 Family Scaffolds |
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COG2255 | Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB | Replication, recombination and repair [L] | 0.84 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 97.48 % |
Unclassified | root | N/A | 2.52 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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2022920000|QLn_FQAYR3Y01EWHL9 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 517 | Open in IMG/M |
2225789001|2226150600 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 522 | Open in IMG/M |
2236876005|none_p170358 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 519 | Open in IMG/M |
3300000928|OpTDRAFT_10037084 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1700 | Open in IMG/M |
3300000928|OpTDRAFT_10159624 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1293 | Open in IMG/M |
3300000928|OpTDRAFT_10202443 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1170 | Open in IMG/M |
3300000928|OpTDRAFT_10206085 | All Organisms → Viruses → Predicted Viral | 1329 | Open in IMG/M |
3300000929|NpDRAFT_10479488 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 821 | Open in IMG/M |
3300000930|BpDRAFT_10097459 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 2853 | Open in IMG/M |
3300000930|BpDRAFT_10109543 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 4678 | Open in IMG/M |
3300001778|ACM18_1097078 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 511 | Open in IMG/M |
3300007345|Ga0070752_1122577 | All Organisms → Viruses → Predicted Viral | 1092 | Open in IMG/M |
3300007345|Ga0070752_1401548 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 506 | Open in IMG/M |
3300007539|Ga0099849_1339114 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 536 | Open in IMG/M |
3300007540|Ga0099847_1146757 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 703 | Open in IMG/M |
3300007540|Ga0099847_1253453 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 504 | Open in IMG/M |
3300007554|Ga0102820_1021701 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1580 | Open in IMG/M |
3300007557|Ga0102821_1120678 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 666 | Open in IMG/M |
3300007557|Ga0102821_1141977 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 610 | Open in IMG/M |
3300007644|Ga0102902_1256729 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 513 | Open in IMG/M |
3300007667|Ga0102910_1019060 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1541 | Open in IMG/M |
3300007667|Ga0102910_1059771 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 875 | Open in IMG/M |
3300007716|Ga0102867_1060262 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1001 | Open in IMG/M |
3300007960|Ga0099850_1144771 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 959 | Open in IMG/M |
3300007962|Ga0102907_1159247 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 581 | Open in IMG/M |
3300008259|Ga0114841_1263122 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 549 | Open in IMG/M |
3300009003|Ga0102813_1118911 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 835 | Open in IMG/M |
3300009003|Ga0102813_1133538 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 780 | Open in IMG/M |
3300009055|Ga0102905_1143362 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 509 | Open in IMG/M |
3300009086|Ga0102812_10482398 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 677 | Open in IMG/M |
3300009420|Ga0114994_10149843 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1580 | Open in IMG/M |
3300009436|Ga0115008_10538481 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 836 | Open in IMG/M |
3300009496|Ga0115570_10127949 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1210 | Open in IMG/M |
3300009512|Ga0115003_10428566 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 776 | Open in IMG/M |
3300009705|Ga0115000_10354173 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 941 | Open in IMG/M |
3300010150|Ga0098056_1151703 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 782 | Open in IMG/M |
3300010300|Ga0129351_1384092 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 525 | Open in IMG/M |
3300017719|Ga0181390_1070036 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 988 | Open in IMG/M |
3300017726|Ga0181381_1074259 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 730 | Open in IMG/M |
3300017749|Ga0181392_1135320 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 725 | Open in IMG/M |
3300017762|Ga0181422_1200925 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 600 | Open in IMG/M |
3300017762|Ga0181422_1231881 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 549 | Open in IMG/M |
3300017818|Ga0181565_10002251 | All Organisms → cellular organisms → Bacteria | 14736 | Open in IMG/M |
3300017957|Ga0181571_10597528 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 667 | Open in IMG/M |
3300017958|Ga0181582_10904770 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 519 | Open in IMG/M |
3300017962|Ga0181581_10838408 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 546 | Open in IMG/M |
3300017967|Ga0181590_10597630 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 755 | Open in IMG/M |
3300017986|Ga0181569_10139948 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1717 | Open in IMG/M |
3300018041|Ga0181601_10352398 | Not Available | 799 | Open in IMG/M |
3300018048|Ga0181606_10718489 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 504 | Open in IMG/M |
3300018049|Ga0181572_10165676 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1445 | Open in IMG/M |
3300018049|Ga0181572_10549677 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 706 | Open in IMG/M |
3300018410|Ga0181561_10550222 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 515 | Open in IMG/M |
3300018421|Ga0181592_10718752 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 665 | Open in IMG/M |
3300018424|Ga0181591_11149245 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 520 | Open in IMG/M |
3300019765|Ga0194024_1160934 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 530 | Open in IMG/M |
3300020055|Ga0181575_10499774 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 653 | Open in IMG/M |
3300020184|Ga0181573_10230739 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Emdodecavirus → Sinorhizobium virus N3 | 964 | Open in IMG/M |
3300020184|Ga0181573_10440034 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 589 | Open in IMG/M |
3300020189|Ga0181578_10141743 | All Organisms → Viruses → Predicted Viral | 1277 | Open in IMG/M |
3300020191|Ga0181604_10282736 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 762 | Open in IMG/M |
3300020207|Ga0181570_10315349 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 778 | Open in IMG/M |
3300021185|Ga0206682_10107239 | All Organisms → Viruses → Predicted Viral | 1375 | Open in IMG/M |
3300021185|Ga0206682_10171516 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 1007 | Open in IMG/M |
3300021335|Ga0213867_1022258 | All Organisms → Viruses → Predicted Viral | 2575 | Open in IMG/M |
3300021336|Ga0210307_1021861 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1575 | Open in IMG/M |
3300021364|Ga0213859_10214054 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 890 | Open in IMG/M |
3300021368|Ga0213860_10151304 | All Organisms → Viruses → Predicted Viral | 1022 | Open in IMG/M |
3300021373|Ga0213865_10267902 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 810 | Open in IMG/M |
3300021425|Ga0213866_10568680 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 532 | Open in IMG/M |
3300022053|Ga0212030_1029251 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 762 | Open in IMG/M |
3300022068|Ga0212021_1069688 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 721 | Open in IMG/M |
3300022198|Ga0196905_1120718 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 687 | Open in IMG/M |
3300022822|Ga0222646_101842 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 4766 | Open in IMG/M |
3300022900|Ga0255771_1020885 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Emdodecavirus → Sinorhizobium virus N3 | 4359 | Open in IMG/M |
3300022934|Ga0255781_10000610 | All Organisms → cellular organisms → Bacteria | 28796 | Open in IMG/M |
3300022939|Ga0255754_10064600 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 2080 | Open in IMG/M |
3300023698|Ga0228682_1024031 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 815 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10063203 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1817 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10395192 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 505 | Open in IMG/M |
(restricted) 3300024261|Ga0233439_10100003 | All Organisms → Viruses → Predicted Viral | 1487 | Open in IMG/M |
(restricted) 3300024261|Ga0233439_10375477 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 589 | Open in IMG/M |
3300024281|Ga0228610_1020488 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 791 | Open in IMG/M |
3300024294|Ga0228664_1100058 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 625 | Open in IMG/M |
3300024320|Ga0233398_1079545 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 797 | Open in IMG/M |
3300024329|Ga0228631_1040529 | All Organisms → Viruses | 1319 | Open in IMG/M |
3300024332|Ga0228659_1034208 | All Organisms → Viruses | 1161 | Open in IMG/M |
3300024348|Ga0244776_10167435 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 1588 | Open in IMG/M |
3300024348|Ga0244776_10599432 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 695 | Open in IMG/M |
3300024413|Ga0233393_1109865 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 586 | Open in IMG/M |
3300025617|Ga0209138_1127462 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 692 | Open in IMG/M |
3300025658|Ga0209659_1229290 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 502 | Open in IMG/M |
3300025674|Ga0208162_1181272 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 550 | Open in IMG/M |
3300025701|Ga0209771_1204642 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 568 | Open in IMG/M |
3300025771|Ga0208427_1157083 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 747 | Open in IMG/M |
3300025880|Ga0209534_10447952 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 544 | Open in IMG/M |
3300025881|Ga0209309_10339947 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 663 | Open in IMG/M |
3300025892|Ga0209630_10354346 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 649 | Open in IMG/M |
3300026458|Ga0247578_1113015 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 537 | Open in IMG/M |
3300026503|Ga0247605_1021862 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 1589 | Open in IMG/M |
3300027188|Ga0208921_1025811 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 892 | Open in IMG/M |
3300027220|Ga0208927_1065706 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 622 | Open in IMG/M |
3300027231|Ga0208172_1050161 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 740 | Open in IMG/M |
3300027233|Ga0208678_1092569 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 575 | Open in IMG/M |
3300027571|Ga0208897_1162307 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 549 | Open in IMG/M |
3300027751|Ga0208304_10260868 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 613 | Open in IMG/M |
3300027752|Ga0209192_10017778 | All Organisms → Viruses | 3614 | Open in IMG/M |
3300027780|Ga0209502_10340962 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 633 | Open in IMG/M |
3300028008|Ga0228674_1205774 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 630 | Open in IMG/M |
3300028129|Ga0228634_1017706 | All Organisms → Viruses → Predicted Viral | 2225 | Open in IMG/M |
3300028330|Ga0247601_1028726 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 745 | Open in IMG/M |
3300031622|Ga0302126_10130535 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 950 | Open in IMG/M |
3300031706|Ga0307997_10293204 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 576 | Open in IMG/M |
3300031851|Ga0315320_10896898 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 546 | Open in IMG/M |
3300032088|Ga0315321_10710009 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 582 | Open in IMG/M |
3300032373|Ga0316204_10673197 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 753 | Open in IMG/M |
3300033981|Ga0334982_0449980 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194 | 577 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 19.33% |
Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 16.81% |
Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 14.29% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 10.08% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 6.72% |
Freshwater And Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine | 5.88% |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 4.20% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 3.36% |
Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 3.36% |
Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 2.52% |
Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 1.68% |
Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 1.68% |
Saline Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water | 1.68% |
Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 0.84% |
Freshwater, Plankton | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton | 0.84% |
Freshwater | Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater | 0.84% |
Marine Plankton | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton | 0.84% |
Microbial Mat | Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat | 0.84% |
Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 0.84% |
Marine Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine | 0.84% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 0.84% |
Estuarine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine | 0.84% |
Saline Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water | 0.84% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2022920000 | Saline water microbial communities from Qinghai Lake, Tibetan Plateau - High mountain lake (unassembled) | Environmental | Open in IMG/M |
2225789001 | Saline water microbial communities from Qinghai Lake, Tibetan Plateau -Sample 11638 | Environmental | Open in IMG/M |
2236876005 | Estuarine microbial communities from Columbia River, sample from South Channel ETM site, GS313-3LG-ETM-15m | Environmental | Open in IMG/M |
3300000928 | Marine plume microbial communities from the Columbia River - 25 PSU | Environmental | Open in IMG/M |
3300000929 | Marine plume microbial communities from the Columbia River - 15 PSU | Environmental | Open in IMG/M |
3300000930 | Marine microbial communities from the coastal margin of the Columbia River, USA - 33 PSU, 16m | Environmental | Open in IMG/M |
3300001778 | Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM18, ROCA_DNA027_0.2um_3g | Environmental | Open in IMG/M |
3300006920 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 | Environmental | Open in IMG/M |
3300007345 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 | Environmental | Open in IMG/M |
3300007539 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG | Environmental | Open in IMG/M |
3300007540 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG | Environmental | Open in IMG/M |
3300007554 | Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 | Environmental | Open in IMG/M |
3300007557 | Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715 | Environmental | Open in IMG/M |
3300007644 | Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02 | Environmental | Open in IMG/M |
3300007667 | Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3 | Environmental | Open in IMG/M |
3300007716 | Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3 | Environmental | Open in IMG/M |
3300007960 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG | Environmental | Open in IMG/M |
3300007962 | Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02 | Environmental | Open in IMG/M |
3300008259 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA | Environmental | Open in IMG/M |
3300009003 | Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725 | Environmental | Open in IMG/M |
3300009055 | Estuarine microbial communities from the Columbia River estuary - metaG 1556B-3 | Environmental | Open in IMG/M |
3300009086 | Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 | Environmental | Open in IMG/M |
3300009420 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 | Environmental | Open in IMG/M |
3300009436 | Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome | Environmental | Open in IMG/M |
3300009496 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 | Environmental | Open in IMG/M |
3300009512 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 | Environmental | Open in IMG/M |
3300009705 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 | Environmental | Open in IMG/M |
3300010150 | Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG | Environmental | Open in IMG/M |
3300010300 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA | Environmental | Open in IMG/M |
3300017719 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 | Environmental | Open in IMG/M |
3300017726 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 | Environmental | Open in IMG/M |
3300017749 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 | Environmental | Open in IMG/M |
3300017762 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18 | Environmental | Open in IMG/M |
3300017818 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017957 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017958 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017962 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017967 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017986 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018041 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018048 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018049 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018410 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018421 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018424 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300019765 | Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG | Environmental | Open in IMG/M |
3300020055 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly) | Environmental | Open in IMG/M |
3300020184 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101409BT metaG (spades assembly) | Environmental | Open in IMG/M |
3300020189 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly) | Environmental | Open in IMG/M |
3300020191 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly) | Environmental | Open in IMG/M |
3300020207 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly) | Environmental | Open in IMG/M |
3300021185 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 | Environmental | Open in IMG/M |
3300021335 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540 | Environmental | Open in IMG/M |
3300021336 | Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300021364 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304 | Environmental | Open in IMG/M |
3300021368 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550 | Environmental | Open in IMG/M |
3300021373 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282 | Environmental | Open in IMG/M |
3300021425 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284 | Environmental | Open in IMG/M |
3300022053 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2) | Environmental | Open in IMG/M |
3300022068 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2) | Environmental | Open in IMG/M |
3300022198 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3) | Environmental | Open in IMG/M |
3300022822 | Saline water microbial communities from Ace Lake, Antarctica - #293 | Environmental | Open in IMG/M |
3300022900 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG | Environmental | Open in IMG/M |
3300022934 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG | Environmental | Open in IMG/M |
3300022937 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG | Environmental | Open in IMG/M |
3300022939 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG | Environmental | Open in IMG/M |
3300023698 | Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 27R (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300024255 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG | Environmental | Open in IMG/M |
3300024261 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_100_MG | Environmental | Open in IMG/M |
3300024281 | Seawater microbial communities from Monterey Bay, California, United States - 11D | Environmental | Open in IMG/M |
3300024294 | Seawater microbial communities from Monterey Bay, California, United States - 78D | Environmental | Open in IMG/M |
3300024320 | Seawater microbial communities from Monterey Bay, California, United States - 38D | Environmental | Open in IMG/M |
3300024329 | Seawater microbial communities from Monterey Bay, California, United States - 39D | Environmental | Open in IMG/M |
3300024332 | Seawater microbial communities from Monterey Bay, California, United States - 73D | Environmental | Open in IMG/M |
3300024348 | 0.2um to 3um size fraction coassembly | Environmental | Open in IMG/M |
3300024413 | Seawater microbial communities from Monterey Bay, California, United States - 21D | Environmental | Open in IMG/M |
3300025617 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025658 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025674 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
3300025701 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025771 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025880 | Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes) | Environmental | Open in IMG/M |
3300025881 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes) | Environmental | Open in IMG/M |
3300025892 | Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes) | Environmental | Open in IMG/M |
3300026458 | Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 36R (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300026503 | Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 91R (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300027188 | Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 (SPAdes) | Environmental | Open in IMG/M |
3300027220 | Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02 (SPAdes) | Environmental | Open in IMG/M |
3300027231 | Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02 (SPAdes) | Environmental | Open in IMG/M |
3300027233 | Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02 (SPAdes) | Environmental | Open in IMG/M |
3300027571 | Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes) | Environmental | Open in IMG/M |
3300027751 | Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes) | Environmental | Open in IMG/M |
3300027752 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes) | Environmental | Open in IMG/M |
3300027780 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes) | Environmental | Open in IMG/M |
3300028008 | Seawater microbial communities from Monterey Bay, California, United States - 1D_r | Environmental | Open in IMG/M |
3300028129 | Seawater microbial communities from Monterey Bay, California, United States - 42D | Environmental | Open in IMG/M |
3300028330 | Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 76R (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031622 | Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m | Environmental | Open in IMG/M |
3300031706 | Marine microbial communities from David Island wharf, Antarctic Ocean - #36 | Environmental | Open in IMG/M |
3300031851 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515 | Environmental | Open in IMG/M |
3300032088 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515 | Environmental | Open in IMG/M |
3300032373 | Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2 | Environmental | Open in IMG/M |
3300033981 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
QL_na_5023360 | 2022920000 | Saline Water | MAAVDEIILAPESFRTIYLRREDRVILRTENGRKIIVKRIIPEEWEAYRIYDYENTNKRK |
2226245197 | 2225789001 | Saline Water | MAAVDEIILAPESFRTIYLRREDRVILRTENGRKNY |
none_1703582 | 2236876005 | Marine Estuarine | MAAVDDIILALESFRTIYLRREDRVILRTEQGRKIIVKRIIPEEWQPYRMYDYEYDLNENKKEYSCLTVNSLGLVN |
OpTDRAFT_100370844 | 3300000928 | Freshwater And Marine | MAAIDDIILAPESFQTIYLRREDRVIMRTERGAKIIIKRIIP |
OpTDRAFT_101596243 | 3300000928 | Freshwater And Marine | MAVDIVKLAPESFQTIYLRKEDRIVLRTEQGRKIIIKR |
OpTDRAFT_102024433 | 3300000928 | Freshwater And Marine | MAVDIVKLAPESFQTIYLRKEDRIILRTEQGRKIIIKRIIPSEWRPWKVYDQELAENENKKEIFLI |
OpTDRAFT_102060853 | 3300000928 | Freshwater And Marine | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPDEWKPWKLYDQELADNNNKKEIFL |
NpDRAFT_104794884 | 3300000929 | Freshwater And Marine | MAAVDDIILAPESFRTIYLRREDRVILRTEQGRKIIVKRIIPEEWQPYRMYDYEYD |
BpDRAFT_100974591 | 3300000930 | Freshwater And Marine | MAVDIVKLAPESFRTIYLRKEDRVILRTEQGRKIIIKRI |
BpDRAFT_101095439 | 3300000930 | Freshwater And Marine | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRI |
ACM18_10970781 | 3300001778 | Marine Plankton | MAVEIVKLAPESFRTIYLRKEDRVILRTETGRKIIIKRIIPDEWKPWKIY |
Ga0070748_11170413 | 3300006920 | Aqueous | MAVDILKLSPESFRTLFLRKEDKIILRTEAGKRIVIKRIIPEEWIPYR |
Ga0070752_11225771 | 3300007345 | Aqueous | MAAVDEILLAPESFRTIYLRREDRVIMRTEQGAKIIIKRIIPEEWEPYRIYEYEETLNNNKKEIYLF |
Ga0070752_14015482 | 3300007345 | Aqueous | MAVNDIILAPESFRTIYLRREDRVILRTERGEKIIIKRIIPDDWVAYRIYEYEETINNNKKEIFLF |
Ga0099849_13391142 | 3300007539 | Aqueous | MAVEEIILAPESFQTIYLRREDRVILRTESGRKIIVKRIIPDE* |
Ga0099847_11467571 | 3300007540 | Aqueous | MAVDNIVLAPESFRTIYLRREDRVIMRTERGEKIIVKRVIPEDWIPVRI |
Ga0099847_12534531 | 3300007540 | Aqueous | MNMAVDIIKLSPDSFRTIFLRKEDRIILRTEAGKRIIIKRIIPEEWIPYRIYDYERALNDNKKNIFL |
Ga0102820_10217011 | 3300007554 | Estuarine | MAAVDDIILAPESFRTIYLRREDRVILRTEQGRKIIVKRIIPEEWQPYRMYD |
Ga0102821_11206781 | 3300007557 | Estuarine | MAVDNIILAPESFRTIYLRKEDRVIMRTERGQKIIIKRIIPEDWVPYR |
Ga0102821_11419771 | 3300007557 | Estuarine | MAVDIIKLTPDSFLTIYLRREDRVILRTEQGRKIVIKRIIP |
Ga0102902_12567292 | 3300007644 | Estuarine | MAVDIVKLAPESFRTIYLRKEDRVILRTEQGRKIIIKRIIPEEWKPYRIYDYEIALNE |
Ga0102910_10190603 | 3300007667 | Estuarine | MAVDIIKLAPESFQTIYLRKEDRIILRTEQGRKIIIKRIIPSEWKPWKIYD |
Ga0102910_10597711 | 3300007667 | Estuarine | MAVDIIKLTPDSFLTIYLRREDRVILRTEQGRKIVIKRIIPEEWKAWRIYDNENAIN |
Ga0102867_10602623 | 3300007716 | Estuarine | MAAVDEILLAPESFRTIYLRREDRVIMRTEQGQKIIIR |
Ga0099850_11447711 | 3300007960 | Aqueous | MAVEEIILAPESFRTIYLRREDRVILRTETGRKIIIKRIIPEEWEPYRIYDY |
Ga0102907_11592471 | 3300007962 | Estuarine | MAAGDEILLAPESFRTIYLRREDRVIMRTEQGQKIIIRRIIPEEWKPY |
Ga0114841_12631222 | 3300008259 | Freshwater, Plankton | MATDIIKIAPNSFKTIFLRKEDRLILRTEAGRRIVLQRIVPEQWKAYRIYEY |
Ga0102813_11189113 | 3300009003 | Estuarine | MAVDIIKLTPDSFLTIYLRREDRVILRTEQGRKIVIKRIIPEEWKAWR |
Ga0102813_11335383 | 3300009003 | Estuarine | MAAVDDIILAPESFRTIYLRREDRVILRTEQGRKIIVKRIIPEEWQPYRMYDYEYDLNE |
Ga0102905_11433622 | 3300009055 | Estuarine | MAVDIIKLTPDSFLTIYLRREDRVILRTEQGRKIVIKRIIPEE |
Ga0102812_104823981 | 3300009086 | Estuarine | MAVDIIKLAPESFQTIYLRKEDRIILRTEQGRKIIIKR |
Ga0114994_101498433 | 3300009420 | Marine | MAVDNLILAPESFRTIYLRKEDRVIMRTERGQKIIIKRIIPEDWVPYRIFEYEE |
Ga0115008_105384813 | 3300009436 | Marine | MAVDIVKLAPESFQTIYLRKEDRIILRTEQGRKIIIKRIIPAEWREWKVYDQELAE |
Ga0115570_101279491 | 3300009496 | Pelagic Marine | MAVDNIILAPESFRTIYLRKEDRVIMRTERGQKIIIKRIVPEDWVPYRIFEYEEQ |
Ga0115003_104285661 | 3300009512 | Marine | MAAIDDIILAPESFQTIYLRREDRVIMRTERGAKIIIKRIIPEEWKPYRIYDYEIALNEKKKEIFL |
Ga0115000_103541731 | 3300009705 | Marine | MAVDNLILAPESFRTIYLRKEDRVIMRTERGQKIIIKRIIPEDWVP |
Ga0098056_11517033 | 3300010150 | Marine | MAVDNIILAPESFRTIYLRREDRVILRTERGQKIIVKRIIPDDWVPYRIF |
Ga0129351_13840921 | 3300010300 | Freshwater To Marine Saline Gradient | MAVDQVILAPESFRTIYLRREDRVILLTEQGRKIIIKR |
Ga0181390_10700363 | 3300017719 | Seawater | MAVDQVILAPESFRTIYLRKEDRVILRTERGRKIIIKRIIPDEWKEYRIY |
Ga0181381_10742593 | 3300017726 | Seawater | MAAVDEILLAPESFRTIYLRREDRVILRTEQGAKIIIKRIIPDEWEPYRIYEYEQALNDNKK |
Ga0181392_11353203 | 3300017749 | Seawater | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPDEWKP |
Ga0181422_12009252 | 3300017762 | Seawater | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPNEWKPWRVYDQELADNNNKKEIFLV |
Ga0181422_12318811 | 3300017762 | Seawater | MAVNDIILAPESFRTIYLRREDRVILRTERGQKIIVKRIIPDDWVPYR |
Ga0181565_1000225125 | 3300017818 | Salt Marsh | MAVDEIILAPESFQTIYLRREDRVILRTEQGRKII |
Ga0181571_105975281 | 3300017957 | Salt Marsh | MAAVDEILLAPESFRTIYLRREDRVIMRTEQGAKII |
Ga0181582_109047702 | 3300017958 | Salt Marsh | MAVEIVKLAPESFRTIYLRKEDRVILRTETGRKIIIKRIIPDEWKPWKIYDEE |
Ga0181581_108384082 | 3300017962 | Salt Marsh | MAVEQVKLTADSFRTIYLRREDRVILRTETGVKIIIRRIIPDEWKPWRVYENEEALNDNK |
Ga0181590_105976301 | 3300017967 | Salt Marsh | MAIDIVKIAPESFRTIYLRKEDRIILRTEAGRKIII |
Ga0181569_101399483 | 3300017986 | Salt Marsh | MAAVDDIVLAPESFRTIYLRREDRVILRTERGQKIIVKRIIPEDWV |
Ga0181601_103523983 | 3300018041 | Salt Marsh | MAVDIIKLAPESFQTIYLRKEDRIILRTEQGRKIIIKRIIPDEWKP |
Ga0181606_107184891 | 3300018048 | Salt Marsh | MADVIRLAPDSFRTIYLRREDRVILLTETGRRIFIKRI |
Ga0181572_101656761 | 3300018049 | Salt Marsh | MAVDDIILAPESFQTIYLRREDRVILRTERGEKIIIKRIIPEEWQPYRYFDYEFALNEKKKEI |
Ga0181572_105496771 | 3300018049 | Salt Marsh | MAVEDIILTPESFETIYLRREDRVILRTEKGAKIIIKRIIPDEWVAYRYYEYEEDINNNKKEIL |
Ga0181561_105502222 | 3300018410 | Salt Marsh | MAVDLVKLTPESFETIYLRKEDRVIIRTEQGRKIIIKR |
Ga0181592_107187523 | 3300018421 | Salt Marsh | MADVIRLAPDSFRTIYLRREDRVILLTETGRRIFIKRIIPDEWVPYRIYEQEEALNDN |
Ga0181591_111492451 | 3300018424 | Salt Marsh | MAVDQVILAPESFRTIYLRKEDRVILRTEQGRKIIIKRIIPDEWKE |
Ga0194024_11609342 | 3300019765 | Freshwater | MAINQFILSPESFRTIYLRKEDRVILRTEKGERIIIRRIIPD |
Ga0181575_104997741 | 3300020055 | Salt Marsh | MSVDDIILAPESFQTIYLRREDRVILRTERGEKIIIKRI |
Ga0181573_102307391 | 3300020184 | Salt Marsh | MADVIRLAPDSFRTIYLRREDRVILLTETGRRIFIKRIIPDEWVPYRIYEQEEALNDNKKEIFLFDRK |
Ga0181573_104400341 | 3300020184 | Salt Marsh | MAVDDIILAPESFQTIYLRREDRVILRTERGEKIIIKRIIPEEWQPYRYFDYEFALNEKKKEIFLI |
Ga0181578_101417433 | 3300020189 | Salt Marsh | MAVDDILLAPESFQTIYLRREDRVILRTERGEKIIIKRIIPEEWVPYRIYDYELALN |
Ga0181604_102827361 | 3300020191 | Salt Marsh | MAVDQVILAPESFRTIYLRREDRVILLTEQGRKIIIKRIIPEE |
Ga0181570_103153491 | 3300020207 | Salt Marsh | MAVDDILLAPESFQTIYLRREDRVILRTERGEKIIIKRII |
Ga0206682_101072391 | 3300021185 | Seawater | MAVDQVILAPESFRTIYLRKEDRVILRTERGRKIII |
Ga0206682_101715163 | 3300021185 | Seawater | MAVDIIKLAPESFQTIYLRKEDRVILRTEQGRKIIIKR |
Ga0213867_10222581 | 3300021335 | Seawater | MAVDQVILAPESFRTIYLRKEDRVILRTEQGRKIIIKRIIPDEWKEYRIYEYEKDRNEAKKDI |
Ga0210307_10218613 | 3300021336 | Estuarine | MAVDIIKLAPESFQTIYLRKEDRIILRTEQGRKIIIK |
Ga0213859_102140541 | 3300021364 | Seawater | MAVEQVKLTADSFRTIYLRREDRVILRTETGVKIIIRRIIPDEWRPWRVYENEEALNDN |
Ga0213860_101513041 | 3300021368 | Seawater | MAELIRLAPDSFRTIYLRREDRVILLTEYGRKIIIKRIIPEEWKPWRVYEDEEAKNDN |
Ga0213865_102679021 | 3300021373 | Seawater | MAVDQVILAPESFRTIYLRKEDRVILRTEQGRKIIIKRIIPDEWSAYRIFEYEKDRNE |
Ga0213866_105686802 | 3300021425 | Seawater | MAVDEIILAPESFQTIYLRREDRVILRTEQGRKIIIKRIVPEEWKPYRIYDYERDLNENKKE |
Ga0212030_10292513 | 3300022053 | Aqueous | MAVDNIILAPESFRTIYLRKEDRVIMRTERGDKIIIK |
Ga0212021_10696881 | 3300022068 | Aqueous | MALEQLILSPDSFQTIYLRKEDRVIIRTEKGEKIIIKRIIPD |
Ga0196905_11207181 | 3300022198 | Aqueous | MAVDEIILAPESFRTIYLRREDRVILRTENGRKIIVKRIIPEEWEPYR |
Ga0222646_1018428 | 3300022822 | Saline Water | MAVDIIKLSPESFETIYLRKEDRVILRTEQGRKIIIRRIIPEEWK |
Ga0255771_10208859 | 3300022900 | Salt Marsh | MAVEDIILTPESFETIYLRREDRVILRTEKGAKIIIK |
Ga0255781_100006101 | 3300022934 | Salt Marsh | MAVDEIILAPESFQTIYLRREDRVILRTEQGRKIII |
Ga0255770_104915781 | 3300022937 | Salt Marsh | MADVIRLAPDSFRTIYLRREDRVILLTETGRRIFIK |
Ga0255754_100646001 | 3300022939 | Salt Marsh | MAVDDILLAPESFQTIYLRREDRVILRTERGEKIIIK |
Ga0228682_10240311 | 3300023698 | Seawater | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPSEWKP |
(restricted) Ga0233438_100632031 | 3300024255 | Seawater | MAVEIVKLAPESFRTIYLRKEDRVILRTETGRKIIIKRIIPDEWK |
(restricted) Ga0233438_103951921 | 3300024255 | Seawater | MAVDIIKLTPDSFLTIYLRREDRVILRTEQGRKIVIKRIIPAEWKAWRIYDNENAINENKREI |
(restricted) Ga0233439_101000031 | 3300024261 | Seawater | MAVDEILLAPESFQTIYLRREDRVILRTEQGRKIIIKRIIPEEWEPYRIYQYEQDLNDNKKEIYLFDKN |
(restricted) Ga0233439_103754771 | 3300024261 | Seawater | MAVDQVILAPESFRTIYLRREDRVILLTEQGRKIIIK |
Ga0228610_10204884 | 3300024281 | Seawater | MAVDIVKLAPESFQTIYLRKEDRIVLRTEQGRKIIIKRIIPNELKPWKIYD |
Ga0228664_11000581 | 3300024294 | Seawater | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPDEWK |
Ga0233398_10795453 | 3300024320 | Seawater | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRII |
Ga0228631_10405291 | 3300024329 | Seawater | MAVDIIKLAPESFQTIYLRKEDRVILRTEQGRKIIIKRIIPD |
Ga0228659_10342083 | 3300024332 | Seawater | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPSEWKPWRVYDQELADNNNK |
Ga0244776_101674351 | 3300024348 | Estuarine | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPDEWKPWRVYDQELADNNNKKEIFL |
Ga0244776_105994321 | 3300024348 | Estuarine | MAVDQVILAPESFRTIYLRKEDRVILRTERGRKIIIKRIIPDEWKEYRIYDFERDRNESK |
Ga0233393_11098652 | 3300024413 | Seawater | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPSEWKPWRVYDQELADNNNKKEIFLVD |
Ga0209138_11274623 | 3300025617 | Marine | MAVDNIILAPESFRTIYLRKEDRVIMRTERGQKIIIKRIIPEDWVPYRIFEYEEQIN |
Ga0209659_12292902 | 3300025658 | Marine | MAAVDEILLAPESFRTIYLRREDRVIMRTEQGQKIIIRRIIPEEWKPYRIYDYEQT |
Ga0208162_11812722 | 3300025674 | Aqueous | MAAVDEILLAPESFRTIYLRREDRVIMRTEQGAKIIIKRIIPEE |
Ga0209771_12046422 | 3300025701 | Marine | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPNEWKPWRVYDQELADNNNKKEIFLVD |
Ga0208427_11570831 | 3300025771 | Aqueous | MAVDLIKLSPDSFRTIFLRKEDRTILRTEAGRRIVIKRIIPEEWQAYRVYEY |
Ga0209534_104479521 | 3300025880 | Pelagic Marine | MAVDNIILAPESFRTIYLRREDRVIMRTERGQKIIVKRIVPEDWVPYRVFDHETQLNDNKKEIF |
Ga0209309_103399473 | 3300025881 | Pelagic Marine | MAIEQFVLSPESFRTIYLRKEDRVILRTERGAKIIIRR |
Ga0209630_103543462 | 3300025892 | Pelagic Marine | MAVDNIVLAPESFRTIYLRREDRVILRTERGQKIIVKRIIPDDWVPYRIFEYETQINDNKKEI |
Ga0247578_11130152 | 3300026458 | Seawater | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPSEWKPWRVYDQEL |
Ga0247605_10218623 | 3300026503 | Seawater | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIK |
Ga0208921_10258111 | 3300027188 | Estuarine | MAAVDDIILAPESFRTIYLRREDRVILRTEQGRKIIVKRIIPEEWQPYRM |
Ga0208927_10657063 | 3300027220 | Estuarine | MAAVDEILLAPESFRTIYLRREDRVIMRTELGQKIIIKRIIPEEWEPYRIF |
Ga0208172_10501613 | 3300027231 | Estuarine | MAAVDEILLAPESFRTIYLRREDRVIMRTELGQKIIIKRIIPEE |
Ga0208678_10925692 | 3300027233 | Estuarine | MAVDIIKLAPESFQTIYLRKEDRVILRTEQGRKIIIKRIIPDEWKEWKIFDQ |
Ga0208897_11623072 | 3300027571 | Estuarine | MAVNDIILAPESFRTIYLRREDRVILRTERGQKIIVKRIIPD |
Ga0208304_102608682 | 3300027751 | Estuarine | MAVDNIILAPESFRTIYLRKEDRVIMRTERGQKIIIKRIIPEDWVPYRIFEYEEQINDNKKE |
Ga0209192_100177786 | 3300027752 | Marine | MAVDDIILAPESFRTIYLRREDRVIMRTERGQKIIVKRIIPEDWLPYRIFEHETTLNDNKKEIFL |
Ga0209502_103409623 | 3300027780 | Marine | MAVDNLILAPESFRTIYLRKEDRVIMRTERGQKIIIKRIIPEDWVPYRIFEY |
Ga0228674_12057742 | 3300028008 | Seawater | MAVDIVKLAPESFQTIYLRKEDRIVLRTEQGRKIIIKRIIPNEWKPWKIYDDEEAKN |
Ga0228634_10177061 | 3300028129 | Seawater | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPDEW |
Ga0247601_10287262 | 3300028330 | Seawater | MAVDIVKLAPESFRTIYLRKEDRIILRTEQGRKIIIKRIIPSEWKPWRVYDQELADNNNKKRNLFGG |
Ga0302126_101305353 | 3300031622 | Marine | MAVDSIILAPESFRTIYLRREDRVIMRTERGQKIIIK |
Ga0307997_102932041 | 3300031706 | Marine | MAVDIIKLAPESFQTIYLRKEDRIVLRTEQGRKIIIKRIIPSEWKEWKVYD |
Ga0315320_108968981 | 3300031851 | Seawater | MAVDEIILAPESFRTIYLRREDRVILRTELGRKIIVKRLIPEEWEPYRIYDF |
Ga0315321_107100092 | 3300032088 | Seawater | MAVDIIKLAPESFQTIYLRKEDRVILRTEQGRKIIIKRIIPDEWKEWKI |
Ga0316204_106731971 | 3300032373 | Microbial Mat | MAVDLIKLTPDSFLTIYLRREDRVILRTEQGRKIVIKRIIPEEWKAWRIYDNENAINENKREI |
Ga0334982_0449980_1_171 | 3300033981 | Freshwater | MAVDFIRLAPDSFRTIFLRKEDRVILRTEAGRRIVIKRIIPAEWVPYRVYEYEQALN |
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