NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F073448

Metagenome / Metatranscriptome Family F073448

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F073448
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 38 residues
Representative Sequence QDGMRGARIAFLREVSNPAETRKVLVEMVQQARSQAE
Number of Associated Samples 107
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.71 %
% of genes near scaffold ends (potentially truncated) 91.67 %
% of genes from short scaffolds (< 2000 bps) 89.17 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (72.500 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(11.667 % of family members)
Environment Ontology (ENVO) Unclassified
(19.167 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.333 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.23%    β-sheet: 0.00%    Coil/Unstructured: 70.77%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF00313CSD 6.67
PF13474SnoaL_3 2.50
PF00144Beta-lactamase 1.67
PF03928HbpS-like 1.67
PF12867DinB_2 1.67
PF00072Response_reg 0.83
PF13338AbiEi_4 0.83
PF13519VWA_2 0.83
PF03795YCII 0.83
PF01979Amidohydro_1 0.83
PF03551PadR 0.83
PF04055Radical_SAM 0.83
PF01042Ribonuc_L-PSP 0.83
PF14659Phage_int_SAM_3 0.83
PF02163Peptidase_M50 0.83
PF14079DUF4260 0.83
PF12796Ank_2 0.83
PF02900LigB 0.83
PF00145DNA_methylase 0.83
PF03544TonB_C 0.83
PF07978NIPSNAP 0.83
PF00117GATase 0.83
PF07238PilZ 0.83
PF02547Queuosine_synth 0.83
PF11154DUF2934 0.83
PF02586SRAP 0.83
PF04191PEMT 0.83
PF12728HTH_17 0.83
PF05163DinB 0.83
PF00589Phage_integrase 0.83
PF00355Rieske 0.83
PF13398Peptidase_M50B 0.83
PF13883Pyrid_oxidase_2 0.83
PF00406ADK 0.83
PF07676PD40 0.83
PF00480ROK 0.83
PF14329DUF4386 0.83
PF12681Glyoxalase_2 0.83
PF03929PepSY_TM 0.83
PF01914MarC 0.83
PF07690MFS_1 0.83
PF01648ACPS 0.83
PF12844HTH_19 0.83
PF00575S1 0.83
PF04185Phosphoesterase 0.83
PF10518TAT_signal 0.83
PF01425Amidase 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG2367Beta-lactamase class ADefense mechanisms [V] 1.67
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 1.67
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 1.67
COG1940Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domainTranscription [K] 1.67
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 0.83
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 0.83
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.83
COG3182PepSY-associated TM regionFunction unknown [S] 0.83
COG3295Uncharacterized conserved proteinFunction unknown [S] 0.83
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 0.83
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.83
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 0.83
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 0.83
COG0563Adenylate kinase or related kinaseNucleotide transport and metabolism [F] 0.83
COG0809S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)Translation, ribosomal structure and biogenesis [J] 0.83
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.83
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.83
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.83
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.83
COG2095Small neutral amino acid transporter SnatA, MarC familyAmino acid transport and metabolism [E] 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms72.50 %
UnclassifiedrootN/A27.50 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001213|JGIcombinedJ13530_100476406All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium624Open in IMG/M
3300002245|JGIcombinedJ26739_100045810All Organisms → cellular organisms → Bacteria3959Open in IMG/M
3300002245|JGIcombinedJ26739_100144588All Organisms → cellular organisms → Bacteria2247Open in IMG/M
3300002245|JGIcombinedJ26739_101091147All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae685Open in IMG/M
3300002914|JGI25617J43924_10133064Not Available867Open in IMG/M
3300004156|Ga0062589_102681578All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068518Open in IMG/M
3300005471|Ga0070698_100414191All Organisms → cellular organisms → Bacteria1281Open in IMG/M
3300005537|Ga0070730_10245719All Organisms → cellular organisms → Bacteria1183Open in IMG/M
3300005541|Ga0070733_10216309All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1256Open in IMG/M
3300005552|Ga0066701_10919655All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300005556|Ga0066707_10503218All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium786Open in IMG/M
3300005610|Ga0070763_10671138All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae605Open in IMG/M
3300005712|Ga0070764_10560554All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300005894|Ga0075270_1011096All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1076Open in IMG/M
3300005995|Ga0066790_10423914All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300006052|Ga0075029_100089450All Organisms → cellular organisms → Bacteria1835Open in IMG/M
3300006052|Ga0075029_101175722All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella535Open in IMG/M
3300006059|Ga0075017_101486969All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300006162|Ga0075030_100044041All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3752Open in IMG/M
3300006162|Ga0075030_100211070All Organisms → cellular organisms → Bacteria1562Open in IMG/M
3300006642|Ga0075521_10414016All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300006642|Ga0075521_10426097All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300006794|Ga0066658_10050922All Organisms → cellular organisms → Bacteria1780Open in IMG/M
3300006854|Ga0075425_101287010All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300009029|Ga0066793_10832909All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300009093|Ga0105240_10498686All Organisms → cellular organisms → Bacteria1354Open in IMG/M
3300009143|Ga0099792_11153891Not Available524Open in IMG/M
3300009523|Ga0116221_1459362All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300009633|Ga0116129_1042839All Organisms → cellular organisms → Bacteria1435Open in IMG/M
3300009643|Ga0116110_1046348All Organisms → cellular organisms → Bacteria1573Open in IMG/M
3300010358|Ga0126370_10613151All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300010373|Ga0134128_11934747Not Available649Open in IMG/M
3300010376|Ga0126381_102030545Not Available828Open in IMG/M
3300010398|Ga0126383_10378664All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans1445Open in IMG/M
3300012200|Ga0137382_10420058All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium944Open in IMG/M
3300012202|Ga0137363_10299166Not Available1321Open in IMG/M
3300012202|Ga0137363_11490238All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium567Open in IMG/M
3300012203|Ga0137399_11538891All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium553Open in IMG/M
3300012207|Ga0137381_10587028All Organisms → cellular organisms → Bacteria → Acidobacteria971Open in IMG/M
3300012208|Ga0137376_11779902Not Available506Open in IMG/M
3300012209|Ga0137379_10154972All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans2201Open in IMG/M
3300012351|Ga0137386_10538564All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus841Open in IMG/M
3300013770|Ga0120123_1059667All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300014160|Ga0181517_10321254Not Available809Open in IMG/M
3300014164|Ga0181532_10230543All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1072Open in IMG/M
3300014169|Ga0181531_10432100All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300014199|Ga0181535_10614788Not Available622Open in IMG/M
3300016422|Ga0182039_10022138All Organisms → cellular organisms → Bacteria → Proteobacteria3944Open in IMG/M
3300017927|Ga0187824_10145901All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium782Open in IMG/M
3300017943|Ga0187819_10188558All Organisms → cellular organisms → Bacteria1219Open in IMG/M
3300017943|Ga0187819_10679556Not Available581Open in IMG/M
3300017955|Ga0187817_10008331All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5854Open in IMG/M
3300017955|Ga0187817_10634030All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300017955|Ga0187817_10702339All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium645Open in IMG/M
3300017959|Ga0187779_10855763Not Available623Open in IMG/M
3300018006|Ga0187804_10345693All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium653Open in IMG/M
3300018012|Ga0187810_10352443All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300018026|Ga0187857_10367288All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300018034|Ga0187863_10132024All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300018043|Ga0187887_10374061Not Available841Open in IMG/M
3300018086|Ga0187769_10705133All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300018482|Ga0066669_11001245All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium754Open in IMG/M
3300019786|Ga0182025_1181616All Organisms → cellular organisms → Bacteria1547Open in IMG/M
3300020579|Ga0210407_11050484Not Available619Open in IMG/M
3300020583|Ga0210401_10273133All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1550Open in IMG/M
3300020583|Ga0210401_10926967All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300021171|Ga0210405_10808465All Organisms → cellular organisms → Bacteria → Acidobacteria718Open in IMG/M
3300021178|Ga0210408_11242082All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium567Open in IMG/M
3300021404|Ga0210389_10543589All Organisms → cellular organisms → Bacteria → Acidobacteria914Open in IMG/M
3300021405|Ga0210387_10073033All Organisms → cellular organisms → Bacteria → Acidobacteria2810Open in IMG/M
3300021420|Ga0210394_10743542Not Available858Open in IMG/M
3300021420|Ga0210394_11100929Not Available685Open in IMG/M
3300021474|Ga0210390_11560973Not Available521Open in IMG/M
3300021559|Ga0210409_10341940All Organisms → cellular organisms → Bacteria1345Open in IMG/M
3300022877|Ga0224527_1081486All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300025406|Ga0208035_1008804All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum1634Open in IMG/M
3300025878|Ga0209584_10263122All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300025916|Ga0207663_11535828All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300025934|Ga0207686_10229028All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1346Open in IMG/M
3300025987|Ga0208906_1009070Not Available784Open in IMG/M
3300026334|Ga0209377_1122070All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1043Open in IMG/M
3300026524|Ga0209690_1195187Not Available650Open in IMG/M
3300026872|Ga0207785_1002747Not Available1840Open in IMG/M
3300027070|Ga0208365_1032084All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300027648|Ga0209420_1120078Not Available735Open in IMG/M
3300027748|Ga0209689_1167841All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1017Open in IMG/M
3300027821|Ga0209811_10164179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium829Open in IMG/M
3300027842|Ga0209580_10296948Not Available804Open in IMG/M
3300027855|Ga0209693_10516993Not Available570Open in IMG/M
3300027905|Ga0209415_10313314All Organisms → cellular organisms → Bacteria → Acidobacteria1341Open in IMG/M
3300028563|Ga0265319_1189230Not Available633Open in IMG/M
3300028776|Ga0302303_10078257All Organisms → cellular organisms → Bacteria → Acidobacteria1237Open in IMG/M
3300028879|Ga0302229_10562738All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300029883|Ga0311327_10217562All Organisms → cellular organisms → Bacteria1293Open in IMG/M
3300029982|Ga0302277_1256593All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300029999|Ga0311339_11011017All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans778Open in IMG/M
3300029999|Ga0311339_11209336All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300030007|Ga0311338_11433402Not Available641Open in IMG/M
3300030043|Ga0302306_10037825All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1934Open in IMG/M
3300030659|Ga0316363_10054147All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1904Open in IMG/M
3300030991|Ga0073994_12420357All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300031231|Ga0170824_124973647Not Available621Open in IMG/M
3300031236|Ga0302324_102023084All Organisms → cellular organisms → Bacteria → Acidobacteria722Open in IMG/M
3300031241|Ga0265325_10505092Not Available524Open in IMG/M
3300031344|Ga0265316_11198409Not Available525Open in IMG/M
3300031525|Ga0302326_11457152All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300031715|Ga0307476_10126983All Organisms → cellular organisms → Bacteria → Acidobacteria1820Open in IMG/M
3300031718|Ga0307474_10373688Not Available1106Open in IMG/M
3300031718|Ga0307474_11291425All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae576Open in IMG/M
3300031942|Ga0310916_10518299All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300031945|Ga0310913_10379046All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300031954|Ga0306926_10110868All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3374Open in IMG/M
3300032160|Ga0311301_12075003Not Available659Open in IMG/M
3300032205|Ga0307472_101897704Not Available594Open in IMG/M
3300032892|Ga0335081_10311644All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus2077Open in IMG/M
3300033134|Ga0335073_10118331All Organisms → cellular organisms → Bacteria3399Open in IMG/M
3300033433|Ga0326726_11840769Not Available589Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil11.67%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment7.50%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.50%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa6.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds4.17%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.33%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.33%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.33%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.33%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.50%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.50%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.50%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.50%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.50%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.50%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.67%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.67%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.67%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.67%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.83%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.83%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.83%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.83%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.83%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.83%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.83%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.83%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005894Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_203EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009633Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022877Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T0EnvironmentalOpen in IMG/M
3300025406Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025878Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025987Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_203 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026872Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)EnvironmentalOpen in IMG/M
3300027070Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)EnvironmentalOpen in IMG/M
3300027648Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028563Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaGHost-AssociatedOpen in IMG/M
3300028776Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300029883I_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029982Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030043Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ13530_10047640613300001213WetlandEDGVRGTRIAFLREVNNPEAVRKVLVEMVKHARSPAQ*
JGIcombinedJ26739_10004581063300002245Forest SoilMRGAAIAFLREVSNPVEASKVLVKVVQQTRSRAE*
JGIcombinedJ26739_10014458853300002245Forest SoilTPDGIRGTRIAFLREVSTPIEARKVLVEMVQQASQQV*
JGIcombinedJ26739_10109114733300002245Forest SoilFHVSLNTTDGVRGARIAFPREARNSATTRAILVEMVRQARSQSE*
JGI25617J43924_1013306413300002914Grasslands SoilMGGDLAGGMRGARVAFLREVSNPAETRKVLVEMVQQARSQAE*
Ga0062384_10025731613300004082Bog Forest SoilRLKTQDGMRGARIAFLLEVSSPEEARKVLIEMVGQAQRTPNT*
Ga0062589_10268157813300004156SoilHIRAKTDDGMRGARVAFPREVRNSAEVRTIMIEMVQQARQT*
Ga0058899_1011482423300004631Forest SoilVRMKISGGMRGARIACLREVSSAAEARKVLVEMVQQARSQT*
Ga0070698_10041419123300005471Corn, Switchgrass And Miscanthus RhizosphereMKTRDGTRGARIAFLRAVNDPAETRKVLVEMVQQARSQAE*
Ga0070730_1024571923300005537Surface SoilDGMRGARIAFSREVSNPVETRKVLVEMVRQARLQTE*
Ga0070733_1021630913300005541Surface SoilKTQDGMRGARIAFLREVRDSAETRKVMVEMVQQAREK*
Ga0066701_1091965513300005552SoilDGMRGARIAFLREVSNPAETRKVLVEMVQQARSKV*
Ga0066707_1050321813300005556SoilFHVRVKTQDGMRGARVAFLRVVSNSAETRKVFVEMVQLARSRAE*
Ga0070763_1067113813300005610SoilDGMRGTRIAFLREAHNPKEARDVLIEMVQQARQK*
Ga0070764_1056055423300005712SoilFHVRVKTKDGVRSARIAFLREVNNPVEARTVLVEMVGQARRM*
Ga0075270_101109613300005894Rice Paddy SoilPERVRGARIAFLREVTDSETARAVLIEMVQQARQR*
Ga0066790_1042391413300005995SoilTEEGMRGARIAFSREVTSSAETRKVLVEMVQQARSETE*
Ga0075029_10008945033300006052WatershedsDGMRGARIAFLQEVRNAAEVRKVMVEMVQRARSQAN*
Ga0075029_10117572213300006052WatershedsMRGARIAFLREASNAAETRNVLVEMVQQARSQPE*
Ga0075017_10148696913300006059WatershedsNEIRGARIAFLREVSSPAETREVLVEMVQQARSRAE*
Ga0075030_10004404113300006162WatershedsGMRGARIAFLREANNPAETRKVLVEMVQQARSQAK*
Ga0075030_10021107043300006162WatershedsPDGMRGARIAFLREVSNGAATREVLKEMVQLARQQ*
Ga0075521_1041401613300006642Arctic Peat SoilDGIRGARIAFLREVSDLVQTREVFVEMVQQARQG*
Ga0075521_1042609723300006642Arctic Peat SoilDTQDGIRGTRIAFLREVSSPAETKEVLAEMVQQARQL*
Ga0066658_1005092213300006794SoilTRDGIRGARIAFLREVNNPAETRKVLVEMVQQARSQAE*
Ga0075425_10128701023300006854Populus RhizosphereDGMRGARIAFLQEVRDAAETRRVLVEMVQHARSQAK*
Ga0066793_1083290923300009029Prmafrost SoilQDGMRGARIAFLREVSNPAETRKVLVEMVQQARSQAE*
Ga0105240_1049868633300009093Corn RhizosphereGVRGARIAFLREVRSPAETRKVLVEMVQQARSSAE*
Ga0099792_1115389113300009143Vadose Zone SoilTQDGMRGARVAFLREVSNPAEARMVLVEMVQQARS*
Ga0116221_145936223300009523Peatlands SoilKTQDGTRGARIAFMREVSNPAEAGKVLVDMTAQARRI*
Ga0116129_104283933300009633PeatlandEGVRGARIAFLREVITPMEARKVLVEMVQQARQQIGALS*
Ga0116110_104634833300009643PeatlandMSGARIAFSHEVRNAAETRKVLVEMAQHARSQAK*
Ga0126370_1061315113300010358Tropical Forest SoilGMRGARIAFLQEVRDATETRKVLVEMVKQARSQRSEL*
Ga0134128_1193474713300010373Terrestrial SoilDGVRGARIAFLREVRSPAETRKVFVEMVQQARSSAG*
Ga0126381_10203054513300010376Tropical Forest SoilTQDGVRGARIAFLREVCNPAEARTVLVEMVRQVRSQK*
Ga0126383_1037866423300010398Tropical Forest SoilKTNDGVRGTRIAFLREVATPAEAREVLVEMVRCARQG*
Ga0137382_1042005813300012200Vadose Zone SoilDGIRGARIAFLREVNSPAETRKVLVEMVQQARSQAE*
Ga0137363_1029916613300012202Vadose Zone SoilKTQDGMRGARIAFLREVNNPAETREVLVEMVQQARSRAE*
Ga0137363_1149023823300012202Vadose Zone SoilGFQVRLKTLDGPRGARIGFSREVRSPAEARNVLIEMVAQARQK*
Ga0137399_1153889113300012203Vadose Zone SoilDGMRGARIAFLREVSSPAEARKVLVEMVGQARRM*
Ga0137381_1058702813300012207Vadose Zone SoilVRLKTQDGTRGARITFVREVSSPAEAKKVLVEMVGQVRRM*
Ga0137376_1177990223300012208Vadose Zone SoilPDGMRGARIAFLREVGSTDETRKVLVEMVQQARTQ*
Ga0137379_1015497213300012209Vadose Zone SoilMRGARIAFSQEVRDAAETRKVLVEMVQQARSQGE*
Ga0137386_1053856413300012351Vadose Zone SoilIRGARIAFLREVNSPAETRKVLVEMVQQARSQAE*
Ga0120123_105966713300013770PermafrostGMRGARIAFLREVSNPAETRKVLVEMVQQARSQAE*
Ga0181517_1032125413300014160BogHVRVKMQDSIRGARIAFSREVTTPTEARMVLVEMVQQARDRH*
Ga0181532_1023054313300014164BogTEDGMKGTRIAFLREVSDPAETREVFIEMVNQARQG*
Ga0181531_1043210023300014169BogGFHIRLKTQDGASGARIAFVREVTNPAAARDVLVKMTAQARRG*
Ga0181535_1061478813300014199BogGVRGGRIAFVREVSNPAETRNVLVEMVQQARQPDEPQHR*
Ga0182039_1002213883300016422SoilLKTKDGVRGTRIAFLREVVTPAESREVLVEIVRLARQG
Ga0187802_1024005813300017822Freshwater SedimentDGIRGVRVAFLREVHSASQAREVLVEMVQRARQQA
Ga0187824_1014590123300017927Freshwater SedimentLKTQDGMRGARVAFSREVRNAAEVRAVLVEMVAQARQK
Ga0187819_1018855813300017943Freshwater SedimentGMRGARIAFLREVSNPAETRQVLVEMVQQARSEAE
Ga0187819_1067955613300017943Freshwater SedimentTQEGMRGARIAFSREVTSAAEARTVLVEMVAQARQK
Ga0187817_1000833113300017955Freshwater SedimentTTPDGMRGARIAFLQEVRDAAETRKVLVEMVQQARSQAQ
Ga0187817_1063403013300017955Freshwater SedimentLKLETHEGMRGTRIAFLREVGNPSEARKMLVEMVHRARQR
Ga0187817_1070233923300017955Freshwater SedimentTEDGIRGARIAFLREVSNPAETRKVLVEMVQQARSEV
Ga0187779_1085576323300017959Tropical PeatlandRLKTKDGMRGTRIAFLREVSSPIESREVLREMMKRARQS
Ga0187804_1034569323300018006Freshwater SedimentGMRGARIAFLQEVRDAAETRKVLVEMVQQARSQAQ
Ga0187810_1035244313300018012Freshwater SedimentETHEGMRGTRIAFLREVGNPSEAREVLVEMVHQARRR
Ga0187857_1036728823300018026PeatlandGMRGARIAFLREVSNPVETRKVLVEMVQQARSPTE
Ga0187863_1013202413300018034PeatlandMRKNQDGAGGARIAFPREVSNAAEARDVLVGMTAQARRL
Ga0187887_1037406113300018043PeatlandTQEGASGARIAFLREVSSPAEARDVLVEMTAQERRPSL
Ga0187769_1070513313300018086Tropical PeatlandTLDGVRGARIAFLRKARDPLAARKVLVEMVRQARQG
Ga0066669_1100124513300018482Grasslands SoilTQEGMRGARVAFLREVSNPAEARMVLVEMVQQARSGAK
Ga0182025_118161643300019786PermafrostTVWDFNVRLKTKDGTRGARIAFLREVSNPAEARKVLVEMTAQARRV
Ga0210407_1105048423300020579SoilTQDGMRGARIAFLREVTNSAETRKVLVEMVQQARSQAE
Ga0210401_1027313313300020583SoilLKTEDGTRGARIAFLREVSSPAEARQVLVEMVAEAR
Ga0210401_1092696713300020583SoilKTQDGTRGARIGFLREVSSPAEARKVLVEMVGQARRM
Ga0210405_1080846523300021171SoilFNVRLKTPERIRGARIAFLREVRTPEDARKVLIEMVNQARQP
Ga0210408_1124208223300021178SoilKTQDGMRGARIAFLREASNPAEARMVLVEMVQQARLRQRE
Ga0210389_1054358913300021404SoilHDGMRGARIAFSREVVSPAEARTVLVEMTQQARKG
Ga0210387_1007303333300021405SoilLKMQDGIRGLRIAFLREVGSPAEARQVLVEMVAQARRM
Ga0210394_1074354213300021420SoilTQDGMHGARIAFLREVSDPLQTREVLIEMVRQARQG
Ga0210394_1110092923300021420SoilQDGMRGVRIAFLREVSNPAEARKVLVEMVQQARSRAG
Ga0210390_1156097313300021474SoilGMRGVRIAFLREVSNPAEARKVLVEMVQQARSASAR
Ga0210409_1034194013300021559SoilTQDGTKGARIAFLREVSKPLETRKVLVEMVEKARSKPDRSKV
Ga0224527_108148613300022877SoilTAEGVRGARIAFLHEVRNAGEARNVLVEMVNQARS
Ga0208035_100880413300025406PeatlandQDSIRGARIAFSREVTTPTEARMVLVEMVQQARDRH
Ga0209584_1026312213300025878Arctic Peat SoilDTQDGIRGTRIAFLREVSSPAETKEVLAEMVQQARQL
Ga0207663_1153582823300025916Corn, Switchgrass And Miscanthus RhizosphereKTEDALRGARIAFLREANDPAETRKVLVEMVKQARSQAR
Ga0207686_1022902813300025934Miscanthus RhizosphereTQEGMRGARIAFLQEVSNPAETRKVLVEMVQQARSQAE
Ga0208906_100907013300025987Rice Paddy SoilPERVRGARIAFLREVTDSETARAVLIEMVQQARQR
Ga0209377_112207013300026334SoilDALRGARIAFLREANNPAESRKVLVEMVKQARSEAR
Ga0209690_119518713300026524SoilDGIRGARIAFLREVNSPAETRKVLVEMVQQARSQAE
Ga0207785_100274713300026872Tropical Forest SoilVRMKTQDGTRGARVAFLREVGSPTEARNVLMDMVQQARQR
Ga0208365_103208423300027070Forest SoilTPDGMKGARIAFLREVRNSGEARKVLVEMVQRARQQP
Ga0209420_112007813300027648Forest SoilPAGMRGARIAFLREVRTSVETRKVLVEMVQKARPRPPA
Ga0209689_116784113300027748SoilTRDGIRGARIAFLREVNNPAETRKVLVEMVQQARSQAE
Ga0209811_1016417913300027821Surface SoilDGMRGARIAFLRELSNPAETRKVLVEMVQYARSQAN
Ga0209580_1029694813300027842Surface SoilVKTADGARGARIAFLREARNPDEARKVLVEMVAKAREG
Ga0209693_1051699313300027855SoilGMRGARIAFLREVRTSVETRKVLVEMVQKARPRPPA
Ga0209415_1031331423300027905Peatlands SoilQDGMRGARIAFLREVSSPAETRKVLVEMVQQARQL
Ga0265319_118923023300028563RhizosphereLKTRDGASGARIAFLREVGTPAEARDVLVEMTQQARRV
Ga0302303_1007825713300028776PalsaRAERRSGRVMPLPNPQDGMRGARIAFLREVSTSAETRKVLVAMVHQARQQ
Ga0302229_1056273823300028879PalsaLKTAEGIRGARIAFTREVHNASEARKALVEMAQQARQPA
Ga0311327_1021756213300029883BogSDGIRGARIAFLREVNNPVEARKVLVEMVQQARQRP
Ga0302277_125659313300029982BogTDDGVKGARIAFLREVGNANEARKVLVEMVQQARRQS
Ga0311339_1101101713300029999PalsaMPLPNPQDGMRGARIAFLREVSTSAETRKVLVAMVHQARQQ
Ga0311339_1120933613300029999PalsaQDGMKGARIGLLREVSNPGEARKVLVEMVQRARESV
Ga0311338_1143340213300030007PalsaADGMKGCRVAFLRPVSTSAETRKMLVEMVQQARHS
Ga0302306_1003782543300030043PalsaLRLKTEDGTRSARIAFLREVSSAEEARTVLVEMVGQARRM
Ga0316363_1005414713300030659Peatlands SoilTPDGMRGARIAFLREVRNPKDARDVLIEMVQQARQR
Ga0073994_1242035713300030991SoilQDGTRGARIAFLREVSSPAEARKVLVEMAEQARRM
Ga0170824_12497364713300031231Forest SoilKTQDGTRNARIAFLREVTNPTEARKVLVLMVGQARRM
Ga0302324_10202308433300031236PalsaTADGTRGARIAFLREVRTPMEARNVLVEMVKQARQT
Ga0265325_1050509223300031241RhizosphereKIQDGTRGSRIAFLQEVRTPAEARKVLVEMTAQARRI
Ga0265316_1119840913300031344RhizosphereRLKTQEGMRGARIAFLREVSSSAEAREILVEMTAQARRI
Ga0302326_1145715223300031525PalsaGFYVRMKTADGPRGARIAFSREVDTAPEARSVLIEMVAQARQR
Ga0307476_1012698313300031715Hardwood Forest SoilLKTSEGMRGVRIAFPREVRNTTEARKVLVEMVQRVREQP
Ga0307474_1037368823300031718Hardwood Forest SoilMKGARIAFLREVINPGEARKVLVEMVQKARTEHSD
Ga0307474_1129142523300031718Hardwood Forest SoilLKTADGMRGARIAFLREVSNSQEVRTVLVQMVQQARS
Ga0310916_1051829913300031942SoilQTRDGIRGARIAFLREVSCSAETRKILAAMVQQARSKAE
Ga0310913_1037904613300031945SoilQTRDGIRGARIAFLQEVSCSAETRKILAAMVQQARSKAE
Ga0306926_1011086883300031954SoilEGMRGARIAFLTEVSNPAETRKVLVEMVQQARSQAK
Ga0311301_1207500323300032160Peatlands SoilQDGIRGTRIAFSRDVSNPAETRKVVVEMVQRARSQAR
Ga0307472_10189770423300032205Hardwood Forest SoilKTLDSMRGARIAFLREASNPAETRKVLVEMVQQARSKAR
Ga0335081_1031164413300032892SoilDGMRGARIAFLREVSNPAETRNVLVEMVQQARSQAE
Ga0335073_1011833143300033134SoilKTPNGMRGARIAFLREASNPAETRKVLVEMVQQARSRAE
Ga0326726_1184076913300033433Peat SoilLKTQDGMLGARIAFSREVSNPAETRRVLVEMVQQAHPQAK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.