Metagenome Family F072476

Basic Information
Family ID	F072476
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	51 residues
Representative Sequence	MTLRIKSKKILIPDVPPPSARTTKQGLVIAGIGAFCASVVVAAALFVFFGA
Number of Associated Samples	112
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.19 %
% of genes near scaffold ends (potentially truncated)	27.27 %
% of genes from short scaffolds (< 2000 bps)	66.94 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Bacteria (88.430 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands (6.612 % of family members)
Environment Ontology (ENVO)	Unclassified (19.835 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (28.099 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.97% β-sheet: 0.00% Coil/Unstructured: 62.03%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF05168	HEPN	20.66
PF08239	SH3_3	8.26
PF00701	DHDPS	8.26
PF00535	Glycos_transf_2	3.31
PF09586	YfhO	3.31
PF01738	DLH	1.65
PF08241	Methyltransf_11	0.83
PF00398	RrnaAD	0.83
PF02120	Flg_hook	0.83
PF13701	DDE_Tnp_1_4	0.83
PF00857	Isochorismatase	0.83
PF13231	PMT_2	0.83
PF13633	Obsolete Pfam Family	0.83
PF02597	ThiS	0.83
PF00990	GGDEF	0.83
PF12762	DDE_Tnp_IS1595	0.83
PF07592	DDE_Tnp_ISAZ013	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	20.66
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	20.66
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	16.53
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	0.83
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.83
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.83
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.83
COG3144	Flagellar hook-length control protein FliK	Cell motility [N]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.43 %
Unclassified	root	N/A	11.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.43 %
Unclassified	root	N/A	11.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.43 %
Unclassified	root	N/A	11.57 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	78.51 %
Unclassified	root	N/A	11.57 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.83 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	76.03 %
Unclassified	root	N/A	11.57 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	76.03 %
Unclassified	root	N/A	11.57 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.83 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	75.21 %
Unclassified	root	N/A	11.57 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.83 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	75.21 %
Unclassified	root	N/A	11.57 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.83 %
Croceibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Croceibacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	75.21 %
Unclassified	root	N/A	11.57 %
Croceibacterium atlanticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Croceibacterium → Croceibacterium atlanticum	0.83 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_12420_length_1404_cov_6.893162	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1436	Open in IMG/M
2162886013\|SwBSRL2_contig_5622444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1793	Open in IMG/M
2199352025\|deepsgr__Contig_3948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	945	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0799783	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2478	Open in IMG/M
3300000559\|F14TC_100722671	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3251	Open in IMG/M
3300000891\|JGI10214J12806_11245224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300003324\|soilH2_10102756	All Organisms → cellular organisms → Bacteria	5550	Open in IMG/M
3300003324\|soilH2_10289512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2126	Open in IMG/M
3300003987\|Ga0055471_10022464	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300003992\|Ga0055470_10109778	Not Available	690	Open in IMG/M
3300004049\|Ga0055493_10020331	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1060	Open in IMG/M
3300004052\|Ga0055490_10000789	All Organisms → cellular organisms → Bacteria	4604	Open in IMG/M
3300004114\|Ga0062593_102202373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300004157\|Ga0062590_100902723	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	827	Open in IMG/M
3300004463\|Ga0063356_100310898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1961	Open in IMG/M
3300004463\|Ga0063356_100932909	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1230	Open in IMG/M
3300004463\|Ga0063356_101417280	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1024	Open in IMG/M
3300004463\|Ga0063356_101582939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	974	Open in IMG/M
3300004463\|Ga0063356_105320739	Not Available	553	Open in IMG/M
3300004480\|Ga0062592_100390270	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1102	Open in IMG/M
3300004643\|Ga0062591_100082322	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2003	Open in IMG/M
3300004778\|Ga0062383_10072220	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1416	Open in IMG/M
3300004779\|Ga0062380_10033985	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1634	Open in IMG/M
3300004780\|Ga0062378_10254805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300004781\|Ga0062379_10207204	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300004782\|Ga0062382_10354297	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	682	Open in IMG/M
3300005171\|Ga0066677_10123472	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1395	Open in IMG/M
3300005294\|Ga0065705_10066404	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	842	Open in IMG/M
3300005336\|Ga0070680_100077590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2736	Open in IMG/M
3300005445\|Ga0070708_100743635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	922	Open in IMG/M
3300005446\|Ga0066686_10011286	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4660	Open in IMG/M
3300005458\|Ga0070681_10249441	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1688	Open in IMG/M
3300005529\|Ga0070741_10000285	All Organisms → cellular organisms → Bacteria	193150	Open in IMG/M
3300005530\|Ga0070679_100094319	All Organisms → cellular organisms → Bacteria	2979	Open in IMG/M
3300005836\|Ga0074470_10322290	All Organisms → cellular organisms → Bacteria	10216	Open in IMG/M
3300005836\|Ga0074470_11378441	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2760	Open in IMG/M
3300005841\|Ga0068863_100397727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1347	Open in IMG/M
3300005874\|Ga0075288_1000964	All Organisms → cellular organisms → Bacteria	3769	Open in IMG/M
3300005886\|Ga0075286_1000753	All Organisms → cellular organisms → Bacteria → Proteobacteria	4264	Open in IMG/M
3300005895\|Ga0075277_1010744	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1197	Open in IMG/M
3300006224\|Ga0079037_102642002	Not Available	500	Open in IMG/M
3300006797\|Ga0066659_11604348	Not Available	547	Open in IMG/M
3300006845\|Ga0075421_101910728	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	635	Open in IMG/M
3300006876\|Ga0079217_10003988	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4283	Open in IMG/M
3300006894\|Ga0079215_10012742	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2619	Open in IMG/M
3300006903\|Ga0075426_10047115	All Organisms → cellular organisms → Bacteria	3081	Open in IMG/M
3300006904\|Ga0075424_101684405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	672	Open in IMG/M
3300006918\|Ga0079216_10662597	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	734	Open in IMG/M
3300009053\|Ga0105095_10138328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1327	Open in IMG/M
3300009078\|Ga0105106_10439018	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	940	Open in IMG/M
3300009143\|Ga0099792_11210830	Not Available	513	Open in IMG/M
3300009156\|Ga0111538_10730545	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1254	Open in IMG/M
3300009597\|Ga0105259_1042873	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	996	Open in IMG/M
3300009678\|Ga0105252_10028309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2039	Open in IMG/M
3300010040\|Ga0126308_10997694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300010362\|Ga0126377_10068362	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3153	Open in IMG/M
3300010373\|Ga0134128_11875846	Not Available	660	Open in IMG/M
3300010401\|Ga0134121_10107019	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2350	Open in IMG/M
3300010403\|Ga0134123_10029443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3984	Open in IMG/M
3300010938\|Ga0137716_10009018	All Organisms → cellular organisms → Bacteria	19531	Open in IMG/M
3300011431\|Ga0137438_1098936	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300011434\|Ga0137464_1141637	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	723	Open in IMG/M
3300012208\|Ga0137376_10001856	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	12190	Open in IMG/M
3300012349\|Ga0137387_10586693	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	808	Open in IMG/M
3300012349\|Ga0137387_10932345	Not Available	626	Open in IMG/M
3300012503\|Ga0157313_1046847	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300012685\|Ga0137397_10010561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Croceibacterium → Croceibacterium atlanticum	6423	Open in IMG/M
3300012922\|Ga0137394_11341717	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300012927\|Ga0137416_10748101	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	861	Open in IMG/M
3300012960\|Ga0164301_10205833	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1258	Open in IMG/M
3300012972\|Ga0134077_10017482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2427	Open in IMG/M
3300014263\|Ga0075324_1131796	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	563	Open in IMG/M
3300014317\|Ga0075343_1098008	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300017930\|Ga0187825_10006120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4024	Open in IMG/M
3300017997\|Ga0184610_1137804	Not Available	795	Open in IMG/M
3300018054\|Ga0184621_10092280	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1063	Open in IMG/M
3300018061\|Ga0184619_10167826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1005	Open in IMG/M
3300018081\|Ga0184625_10026904	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2795	Open in IMG/M
3300018084\|Ga0184629_10480769	Not Available	649	Open in IMG/M
3300018422\|Ga0190265_11267926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	854	Open in IMG/M
3300018433\|Ga0066667_11174361	Not Available	667	Open in IMG/M
3300018469\|Ga0190270_12046962	Not Available	631	Open in IMG/M
3300021073\|Ga0210378_10015887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3080	Open in IMG/M
3300022309\|Ga0224510_10149424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1375	Open in IMG/M
3300022756\|Ga0222622_10254590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1191	Open in IMG/M
3300025559\|Ga0210087_1003997	All Organisms → cellular organisms → Bacteria	3425	Open in IMG/M
3300025912\|Ga0207707_10088117	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2711	Open in IMG/M
3300025912\|Ga0207707_10229880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1614	Open in IMG/M
3300025921\|Ga0207652_10108095	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2464	Open in IMG/M
3300025925\|Ga0207650_10888759	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	756	Open in IMG/M
3300025951\|Ga0210066_1002519	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2399	Open in IMG/M
3300025964\|Ga0210127_1011673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	985	Open in IMG/M
3300025971\|Ga0210102_1031427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1145	Open in IMG/M
3300026058\|Ga0208421_1010062	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	815	Open in IMG/M
3300026320\|Ga0209131_1105861	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1476	Open in IMG/M
3300026327\|Ga0209266_1273120	Not Available	535	Open in IMG/M
3300027639\|Ga0209387_1004448	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2397	Open in IMG/M
3300027691\|Ga0209485_1026860	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1362	Open in IMG/M
3300027691\|Ga0209485_1351324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300027715\|Ga0208665_10239037	Not Available	571	Open in IMG/M
3300027735\|Ga0209261_10135094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	651	Open in IMG/M
3300027815\|Ga0209726_10055500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2701	Open in IMG/M
3300027831\|Ga0209797_10238900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	765	Open in IMG/M
3300027843\|Ga0209798_10043236	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2365	Open in IMG/M
3300027909\|Ga0209382_10048395	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5072	Open in IMG/M
3300028145\|Ga0247663_1090806	Not Available	551	Open in IMG/M
3300030006\|Ga0299907_10945009	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
3300031226\|Ga0307497_10235017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	811	Open in IMG/M
3300031229\|Ga0299913_10342017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1484	Open in IMG/M
3300031446\|Ga0170820_14462644	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	776	Open in IMG/M
3300031538\|Ga0310888_10722896	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	612	Open in IMG/M
3300031547\|Ga0310887_10393905	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	814	Open in IMG/M
3300031548\|Ga0307408_100064894	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2676	Open in IMG/M
3300031731\|Ga0307405_10051755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2550	Open in IMG/M
3300031740\|Ga0307468_100957243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	748	Open in IMG/M
3300031908\|Ga0310900_11102334	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	657	Open in IMG/M
3300033417\|Ga0214471_10474948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1002	Open in IMG/M
3300033433\|Ga0326726_10038094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4193	Open in IMG/M
3300033475\|Ga0310811_10021687	All Organisms → cellular organisms → Bacteria → Proteobacteria	8490	Open in IMG/M
3300034194\|Ga0370499_0082378	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	790	Open in IMG/M
3300034257\|Ga0370495_0128724	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	796	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.60%
Host-Associated	Host-Associated	12.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.85%
Aquatic	Environmental → Aquatic	29.75%
Plants	Host-Associated → Plants	12.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.20%
Freshwater	Environmental → Aquatic → Freshwater	11.57%
Sediment	Environmental → Aquatic → Sediment	9.92%
Marine	Environmental → Aquatic → Marine	7.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.79%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.83%
Peat	Environmental → Terrestrial → Peat	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.26%
Loam	Environmental → Terrestrial → Soil → Loam	7.44%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Sediment	Environmental → Aquatic → Marine → Sediment	0.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.44%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.48%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.48%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.83%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.83%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	0.83%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	6.61%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.13%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.13%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.48%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.48%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.65%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.65%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.83%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.83%
Hot Spring Fe-Si Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Fe-Si Sediment	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300004049	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300004781	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010938	Sediment microbial community from Chocolate Pots hot springs, Yellowstone National Park, Wyoming, USA. Combined Assembly of Gp0156111, Gp0156114, Gp0156117	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025951	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025964	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026058	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034194	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072476

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_00859090	2140918013	Soil	MALRVKSRKILIPDVRPPVGEATTYQGLVIAGIGVFCGSVVIAAVLFVFLGV
SwBSRL2_0708.00006000	2162886013	Switchgrass Rhizosphere	MAIQFGRAKKIPIPDVPSPDARESEAGLVIAGIGIFCASVVIAAMVFVFLA
deepsgr_00318480	2199352025	Soil	MTLRIKSKKILIPDVPPPSAHTTKQGLVIAGIGAFCASVVVTAALFXXXGA
ICChiseqgaiiDRAFT_07997833	3300000033	Soil	MAIHFGRAKKIPIPDVPPPDARESEAGLVIAGIGIFCASVVIAAMVFVFLA*
F14TC_1007226711	3300000559	Soil	MTLKSNARKILIPDVPPPRAMHEDWVIAGIGLFCATFVIAALVVVFFGA*
JGI10214J12806_112452242	3300000891	Soil	MALRARPRKILIPDVPPVVRSTPKQGLVIAGIGVFCMSMVIAAVLFVFFGA*
soilH2_101027566	3300003324	Sugarcane Root And Bulk Soil	MMLRMKSKKILISDMPPPSMRDARQSLVIAGIGALCASVVIAAVLFVFFGA*
soilH2_102895123	3300003324	Sugarcane Root And Bulk Soil	VTLRRKRKKILIPDVPPPIAGGAKQRLVIAGIGAFCASVVIAAVLFVFFGA*
Ga0055471_100224642	3300003987	Natural And Restored Wetlands	MALRVKSRKILIPDVPPVGESTTYQGLVIAGIGVFCGSVVIAAVLFVFLGV*
Ga0055470_101097781	3300003992	Natural And Restored Wetlands	MALRVKSRKILIPDVPPVAKSTTYQGLVIAGIGVFCGSVVIAAVLFVFLGV*
Ga0055493_100203312	3300004049	Natural And Restored Wetlands	MTLPFSKTKKILIPDVPPLSARETEAGIVITGIGIFCAAVVIAAMLFVFLGA*
Ga0055490_100007892	3300004052	Natural And Restored Wetlands	MTLPFSKTKKILIPDVPPLSARETEAGIVIAGIGIFCAAVVIAAMLFVFLGA*
Ga0062593_1022023731	3300004114	Soil	MILPFIKTKKILIPDVPPSSGREQEAGIVIAGIGIFCASVVIAAML
Ga0062590_1009027232	3300004157	Soil	MAIQFGRAKKIPIPDVPSPDARESEAGLVIAGIGIFCASVVIAAMVFVFLA*
Ga0063356_1003108982	3300004463	Arabidopsis Thaliana Rhizosphere	MALPLRTKSRRILIPDVSPAVKTITRQGVVIAGIGVFCATVVIVAVLFVFLGA*
Ga0063356_1009329092	3300004463	Arabidopsis Thaliana Rhizosphere	MILPFIKTKKILIPDVPPSSGREQEAGIVIAGIGIFCASVVIAAMLFVFLGS*
Ga0063356_1014172803	3300004463	Arabidopsis Thaliana Rhizosphere	MALRVKSRKILIPDVRPPVGEATTYQGLVIAGIGVFCGSVVIAAVLFVFLGV*
Ga0063356_1015829391	3300004463	Arabidopsis Thaliana Rhizosphere	MIFPFLKTKKILIPDVPPPSARESEAGLVIAGIGIFCASVVIAAMLFVFLGA*
Ga0063356_1053207391	3300004463	Arabidopsis Thaliana Rhizosphere	MALRAKSRKILIPDVPPVVKSTTKQGLVIAGIGVFCMSMVIVAVLFVFLGA*
Ga0062592_1003902702	3300004480	Soil	MAIQFGRAKKIPIPDVPPPDARESEAGLVIAGIGIFCASVVIAAMVFVFLA*
Ga0062591_1000823223	3300004643	Soil	AIQFGRAKKIPIPDVPPPDARESEAGLVIAGIGIFCASVVIAAMVFVFLA*
Ga0062383_100722203	3300004778	Wetland Sediment	MAIPFIKSKRIPIPDVPPPSARDSEPGLVIAGIGIFCASVVIAAMLFVFLGA*
Ga0062380_100339854	3300004779	Wetland Sediment	MTLPFIKSKRILIPDVPPPTARESEPGLVIAGIGIFCASVVIAAVLFVFLGA*
Ga0062378_102548052	3300004780	Wetland Sediment	IKSKRIPIPDVPPPSARDSEPGLVIAGIGIFCASVVIAAMLFVFLGA*
Ga0062379_102072041	3300004781	Wetland Sediment	LHLQAMTLPFVKSKRILIPDVPPPSVRESDPGLVIAGIGVFCGLVVIAAMLFVFLGA*
Ga0062382_103542971	3300004782	Wetland Sediment	VASKLLHLQAMTLPFVKSKRILIPDVPPPSVRESDPGLVIAGIGVFCGLVVIAAMLFVFLGA*
Ga0066677_101234723	3300005171	Soil	MTLRSKSRKILIPDVPPSVQAINQGVVIAGIGVFCATLVIAAVLFVFFGG*
Ga0065705_100664041	3300005294	Switchgrass Rhizosphere	MALRANSRKILIPDVPPVVKSTTKQGLVIAGIGVFCMSMVIVAVLFVFLG
Ga0070680_1000775903	3300005336	Corn Rhizosphere	MMLPTKSKKILIPDVPPPSMCDARQSWVIAGIGAFCASVVIAAVLFVFFGA*
Ga0070708_1007436351	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTFRQKSKKILIPNVPPRPLLAHQDLVIAGIGVFCATVVIAAVVFVFFGA*
Ga0066686_100112865	3300005446	Soil	MTFRQKSKKILIPDVPPRPLLAHQDLVIAGIGVFCATVVIAAVVFVFFGA*
Ga0070681_102494412	3300005458	Corn Rhizosphere	MMLRTKSKKILIPDVPPPSMRDARQSLVIAGIGAFCASVVIAAALFVFFGA*
Ga0070741_10000285107	3300005529	Surface Soil	MTLRRKRILIPDVPPPIARGAKQSLVIAGIGAFCASVVIAAVLFVFFGA*
Ga0070679_1000943194	3300005530	Corn Rhizosphere	MMLPTKSKKILIPDVPPPSMCDARQSWVIAGIGAFCASVVIAAALFVFFGA*
Ga0074470_103222908	3300005836	Sediment (Intertidal)	MRLRFIKTKKILIPDVPPSSAPETEAGLVIAGIGIFCASVVIAAMLFVFLGA*
Ga0074470_113784415	3300005836	Sediment (Intertidal)	MTLHFFKTKKILIPDVPPTSAPETEAGLVIAGIGIFCASVVIAAMLFVFLGA*
Ga0068863_1003977271	3300005841	Switchgrass Rhizosphere	MTLRIKSKKILIPDVPPPLARTTKQGLVIAGIGGFCASVVVAAALFVFFGA*
Ga0075288_10009642	3300005874	Rice Paddy Soil	MALRVKSRNILIPDVPPVGESTTYQGLVIAGIGVFCGSVVIAAVLFVFLGV*
Ga0075286_10007534	3300005886	Rice Paddy Soil	MALGVKSRNILIPDVPPVGESTTYQGLVIAGIGVFCGSVVIAAVLFVFLGV*
Ga0075277_10107442	3300005895	Rice Paddy Soil	MLSNFRMALFTKSRKILIPDVPPAVKQTSQQGLVIAGIGVFCASVVLAAVLFVFLGT*
Ga0079037_1026420021	3300006224	Freshwater Wetlands	PFIKTKKILIPDTPPPTARETEPGLVIAGIGIFCAAAVITAMLFVFLGG*
Ga0066659_116043481	3300006797	Soil	AHMTLRSKSRKILIPDVPPSVQAINQGVVIAGIGVFCATLVIAAVLFVFFGG*
Ga0075421_1019107281	3300006845	Populus Rhizosphere	MALRIKSKKILFPDVPSPAMRKQQDLVIAGIGVFCATLVVQLRSLFF
Ga0079217_100039886	3300006876	Agricultural Soil	MALRTKSRRILIPDVPPAVETITHQGVVIAGIGVFCVSVVIVAVLFVFLGA*
Ga0079215_100127425	3300006894	Agricultural Soil	MALRKKSRKILIPDVPPTVETITHQGVVIAGIGAFCVSVVIVAVLVVFLGA*
Ga0075426_100471155	3300006903	Populus Rhizosphere	MTLRIKSKKILIPDVPPPSARTTKQGLVIAGIGAFCASVVVAAALFVFFGA*
Ga0075424_1016844051	3300006904	Populus Rhizosphere	IPDVPPRPLRAHHDLVVAGIGVFCATVVIAAVVFVFFGA*
Ga0079216_106625971	3300006918	Agricultural Soil	MALRTKSRKILIPDVPPTVETITHQGVVIAGIGAFCVSVVIVAVLVVFLGA*
Ga0105095_101383282	3300009053	Freshwater Sediment	MTLPFIKTKKILIPDAAPPSARETEPGLVIAGIGIFCAAVVITAMLFVFLGG*
Ga0105106_104390182	3300009078	Freshwater Sediment	MTLPFIKTKKILIPDAPPPSARETEPGLVIAGIGIFCAAVVITAMLFVFLGG*
Ga0099792_112108301	3300009143	Vadose Zone Soil	RGSPMTLRIKSKKILIPDVPPPLARTIKQGLVLAGIGAFCASVVVAAALFVFFGA*
Ga0111538_107305453	3300009156	Populus Rhizosphere	GAFPRMASKMLNESPMRLRLKSKKILIPDVPPRSAHTTKQGLVIAGIGALCASVVVAAALFVFFGA*
Ga0105259_10428732	3300009597	Soil	MTLPFIKTKKILIPDAPPPSARETEPGLVIAGIGIFCAAVVITAMLFVFLG
Ga0105252_100283092	3300009678	Soil	MTLPFIKTKKILISDVPPTSSREQEVGLVIAGIGIFCASVVIAAMLFVLIGT*
Ga0126308_109976942	3300010040	Serpentine Soil	MALPSIKPKKILIPDVPPPNDRESEAGLVIAGIGILCASVAIAAMLFVFLGA*
Ga0126377_100683621	3300010362	Tropical Forest Soil	PFRTKKIAIPDVPPPAKRLHQDWVVAGIGVFCATVVIIAVAFVFFGA*
Ga0134128_118758461	3300010373	Terrestrial Soil	MMLRTKSKKILIPDVPPPTMRDARQSLVIAGIGAFCASVVIAAALFVFFGA*
Ga0134121_101070193	3300010401	Terrestrial Soil	MMRLWKSKRILIPDVPPKTIKEINQDLVVAGIGFLCATVVIAAVVFVFIGA*
Ga0134123_100294432	3300010403	Terrestrial Soil	MTLRIKSKKILIPDVPPPLARTTKQGLVIAGIGAFCASVVVAAALFVFFGA*
Ga0137716_1000901810	3300010938	Hot Spring Fe-Si Sediment	MAFKMLCAIPVTFRFKRRKILIPDVPPPSPRAQQEWVIAGIGLFCATVVVAAVALVFFGA
Ga0137438_10989361	3300011431	Soil	MMRLWKSKRILIPDVPPKTVKEINQDLVVAGIGFLCATVVIAAVVFVFIGA*
Ga0137464_11416372	3300011434	Soil	MTLPFIKSKKILIPDVPPTSSREKEVGLVIAGIGIFCASVVIAAMLFVFLGA*
Ga0137376_100018565	3300012208	Vadose Zone Soil	MTLRSKFRKILIPDVPPSLQAINQGGVIAGIGVFCATLVIAAVLFVFFGG*
Ga0137387_105866932	3300012349	Vadose Zone Soil	RTKSKKILIPDVPPPSTRTAKQGLVIAGIGVFCAAVVVAAVLIVFLGV*
Ga0137387_109323451	3300012349	Vadose Zone Soil	QKSKKILIPDVPPRPLLAHQDLVIAGIGVFCATVVIAAVVFVFFGA*
Ga0157313_10468471	3300012503	Arabidopsis Rhizosphere	SKMLNESPMRLRLKSKKILIPDVPPRSAHTTKQGLVIAGIGALCASVVVAAALFVFFGA*
Ga0137397_100105613	3300012685	Vadose Zone Soil	MTLRIKSKKILIPDVPPPLARTTKQGLVLAGIGAFCASVVVAAALFVFFGA*
Ga0137394_113417172	3300012922	Vadose Zone Soil	KSKKILIPDVPPPSAGTTKQGLVIAGIGAFCASVVVAAALFVFFGA*
Ga0137416_107481011	3300012927	Vadose Zone Soil	MTLRIKSKKILIPDVPPPLARTTKQGLVLAGIGAFCASVVVAATL
Ga0164301_102058331	3300012960	Soil	MTLRIKSKKILIPDVPPPLARTTKQGLVIAGIGAFCASVVVAAALF
Ga0134077_100174821	3300012972	Grasslands Soil	RCSTEVPMTFRQKSKKILIPDVPPRPLLAHQDLVIAGIGVFCATVVIAAVVFVFFGA*
Ga0075324_11317962	3300014263	Natural And Restored Wetlands	MALRVKSRKILIPDVPPVAKSTPYQGLVIAGIGDFCGSVVIAAVLFVFLGV*
Ga0075343_10980082	3300014317	Natural And Restored Wetlands	MTLPFSKTKKILIPDVPPLSARETEAGIVIAGIGIFCAAVVIAAMLFVFLG
Ga0187825_100061203	3300017930	Freshwater Sediment	MALFTKSRRILIPDVPPTVKQTTQQGLVIAGIGVFCASVVLAAVLFVFLGT
Ga0184610_11378041	3300017997	Groundwater Sediment	VTFRSKSKKILILDVPPPAARKHQDLVIAGIGVFCATGVIAAVVFVFFGA
Ga0184621_100922801	3300018054	Groundwater Sediment	YLVTFKSKPKKILIPDVPPPTARTHQDLVIASIGVFCATVVIAAVAFVFFGA
Ga0184619_101678261	3300018061	Groundwater Sediment	VTFRSKSKKILIPDVPPPAARKHQDLVIAGIGVFCATVVIAAVVFVFFGA
Ga0184625_100269043	3300018081	Groundwater Sediment	MTLRIKSKKILIPDVPPPLARTTKQGLVIAGIGAFCASVVVAAALFVFFGA
Ga0184629_104807692	3300018084	Groundwater Sediment	MAFPIAKSKKILIPDVPPPTTRKSEPGLVIAGIGILCGSVVIAAMLFVFLGA
Ga0190265_112679261	3300018422	Soil	MLLQFKSKRILVPDVPPRTTRSSNQGLVIAGIGVFCASVVIAAALFVFLSV
Ga0066667_111743611	3300018433	Grasslands Soil	MTLRSKSRKILIPDVPPSVQAINQGVVIAGMGVFCATLVVAAVLFVFFVV
Ga0190270_120469621	3300018469	Soil	MRFPVAKSKKIFISDFPPPTIRKSEPGLIIAGIEILCGSVMIAAMLLVFLGA
Ga0210378_100158871	3300021073	Groundwater Sediment	VTFKSKPKKILIPDVPPSTARTHQDLVIASIGVFCATVVIAAVAFVF
Ga0224510_101494243	3300022309	Sediment	LYFGRRWVAPKLLHLQAMTLPFVKSRRILIPDVPPRSVRESDPGLVIAGIGVFCASVVIAAMLFVFLGA
Ga0222622_102545901	3300022756	Groundwater Sediment	VTFRSKSKKILIPDVPPPAARKHQDLVIAGIGVFCATVVMAAVVFVFFGA
Ga0210087_10039973	3300025559	Natural And Restored Wetlands	MALRVKSRKILIPDVPPVGESTTYQGLVIAGIGVFCGSVVIAAVLFVFLGV
Ga0207707_100881172	3300025912	Corn Rhizosphere	MMLPTKSKKILIPDVPPPSMCDARQSWVIAGIGAFCASVVIAAVLFVFFGA
Ga0207707_102298802	3300025912	Corn Rhizosphere	MMLRTKSKKILIPDVPPPSMRDARQSLVIAGIGAFCASVVIAAALFVFFGA
Ga0207652_101080951	3300025921	Corn Rhizosphere	MMLPTKSKKILIPDVPPPSMCDARQSWVIAGIGAFCASVVIA
Ga0207650_108887591	3300025925	Switchgrass Rhizosphere	MAIQFGRAKKIPIPDVPPPDARESEAGLVIAGIGIFCASVVIAAMVFVFLA
Ga0210066_10025193	3300025951	Natural And Restored Wetlands	MTLPFSKTKKILIPDVPPLSARETEAGIVIAGIGIFCAAVVIAAMLFVFLGA
Ga0210127_10116732	3300025964	Natural And Restored Wetlands	MTLPFSKTKKILIPDVPPLSARETEAGIVITGIGIFCAAVVIAAMLFVFLGA
Ga0210102_10314273	3300025971	Natural And Restored Wetlands	LPFSKTKKILIPDVPPLSARETEAGIVIAGIGIFCAAVVIAAMLFVFLGA
Ga0208421_10100622	3300026058	Natural And Restored Wetlands	MALRVKSRKILIPDVPPVGESTTYQGLVIAGIGVFCGSVVIAAVLFV
Ga0209131_11058612	3300026320	Grasslands Soil	MMRLWKSTRILIPDVPPKTVKEINQDLVVAGIGFLCATVVIAAVVFVFIGA
Ga0209266_12731202	3300026327	Soil	MTFRQKSKKILIPDVPPRPLLAHQDLVIAGIGVFCATVVIAAVVFVFFGA
Ga0209387_10044481	3300027639	Agricultural Soil	MALRKKSRKILIPDVPPTVETITHQGVVIAGIGAFCVSVVIVAVLVVFLGA
Ga0209485_10268601	3300027691	Agricultural Soil	MALRTKSRKILIPDVPPTVETITHQGVVIAGIGAFCVSVVIVAVLVVFLGA
Ga0209485_13513241	3300027691	Agricultural Soil	MALRTKSRRILIPDVPPAVETITHQGVVIAGIGVFCVSVVIVAVLFVFLGA
Ga0208665_102390371	3300027715	Deep Subsurface	MTLPFIKTKKILIPDVAPTSSRETEAGLVIAGIGIFCASVVIAAMLFVFIGT
Ga0209261_101350942	3300027735	Wetland Sediment	FIKSKRIPIPDVPPPSARDSEPGLVIAGIGIFCASVVIAAMLFVFLGA
Ga0209726_100555002	3300027815	Groundwater	MALKLLYHAPMTPPFSKSKRIPIPDVPPPTARSTELGLVIAGIGIFCASVVIAAMLLVFLGA
Ga0209797_102389001	3300027831	Wetland Sediment	MAIPFIKSKRIPIPDVPPPSARDSEPGLVIAGIGIFCASVVIAAMLFVFLGA
Ga0209798_100432365	3300027843	Wetland Sediment	MTLPFIKSKRILIPDVPPPTARESEPGLVIAGIGIFCASVVIAAVLFVFLGA
Ga0209382_100483956	3300027909	Populus Rhizosphere	MTLRIKSKKILIPDVPPPLARTTKQGLVIAGIGGFCASVVVAAALFVFFGA
Ga0247663_10908062	3300028145	Soil	MMQLFKPKRILIPDVPPKARRELDQDLVVAGIGVLCATIAIAAVVFVFIGA
Ga0299907_109450091	3300030006	Soil	MALRTKSRKILIPDVPPAVKPITHQSVVIAGIGVFCVSVVIVAVLFVFFGA
Ga0307497_102350171	3300031226	Soil	MIFPFLKTKKILIPDVPPPSARESEAGLVIAGIGIFCASVVIAAMLFVFLGA
Ga0299913_103420173	3300031229	Soil	MHVVMLRPKSRKILIPDVPPRVKSSARQGLVIAGIGVFCASLVIVAVALVFLDA
Ga0170820_144626441	3300031446	Forest Soil	LRIKSKKILIPDVPPPSAHTTKQGLVIAGIGAFCASVVVSAALFVFFGA
Ga0310888_107228962	3300031538	Soil	MALPSIKPKKIPIPDVPPPNHRESEAGLLIAGIGILCASVVIAAMLFVFLGT
Ga0310887_103939052	3300031547	Soil	MALPSIKPKKIPIPDVPPPNHRGSEAGLLIAGIGILCASVVIAAMLFVFLGT
Ga0307408_1000648943	3300031548	Rhizosphere	MALPSIKPKKILIPDVTPPNDRESKAGLVIAGIGILCASVVIAAMLFVFLGA
Ga0307405_100517555	3300031731	Rhizosphere	ALPSIKPKKILIPDVTPPNDRESKAGLVIAGIGILCASVVIAAMLFVFLGA
Ga0307468_1009572432	3300031740	Hardwood Forest Soil	KSKKILIPDVPPPLARTTKQGLVIAGIGGFCASVVVAAALFVFFGA
Ga0310900_111023341	3300031908	Soil	SIKPKKIPIPDVPPPNHRESEAGLLIAGIGILCASVVIAAMLFVFLGT
Ga0214471_104749482	3300033417	Soil	MVLRAKSKKILIPDVPPPVKSPNRQSLVIAGIGIFCATVVIAAVVLVFLGA
Ga0326726_100380943	3300033433	Peat Soil	MTLPFNKTKKILIPDVPPPNARDTEPGLVIAGIGIFCASVVIAAMLYVFLGA
Ga0310811_1002168711	3300033475	Soil	MMLRTKSKKILIPDVPPPTMRDARQSLVIAGIGAFCASVVIAAALFVFFGA
Ga0370499_0082378_491_649	3300034194	Untreated Peat Soil	MTLPFIKTKKILIPDASPPSDRETEPGLVIAGIGIFCASVVIAAMLFVFFGG
Ga0370495_0128724_564_722	3300034257	Untreated Peat Soil	MPFPIAKSKKILIPDVPPRITRKSEPELVIAGIGILCGSVMIAAMLFVFLDA

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign