Metagenome / Metatranscriptome Family F071696

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071696
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	112 residues
Representative Sequence	MKMRASELVSAAILSDGSLSIGFRSATDGHTLELSRKSQEQLLPALLASEPANLQKFFPAADVQANSTTEGVLLTFPIREGIAVRVLLSETSRQKLLAQLAALAPAP
Number of Associated Samples	89
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.59 %
% of genes near scaffold ends (potentially truncated)	35.25 %
% of genes from short scaffolds (< 2000 bps)	72.13 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.754 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (14.754 % of family members)
Environment Ontology (ENVO)	Unclassified (31.148 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.41% β-sheet: 29.63% Coil/Unstructured: 42.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF02780	Transketolase_C	13.11
PF03104	DNA_pol_B_exo1	8.20
PF09851	SHOCT	7.38
PF02586	SRAP	5.74
PF07978	NIPSNAP	4.10
PF01124	MAPEG	1.64
PF06094	GGACT	1.64
PF14497	GST_C_3	1.64
PF01904	DUF72	1.64
PF10282	Lactonase	1.64
PF07690	MFS_1	1.64
PF00561	Abhydrolase_1	1.64
PF01925	TauE	0.82
PF08843	AbiEii	0.82
PF01996	F420_ligase	0.82
PF07452	CHRD	0.82
PF04075	F420H2_quin_red	0.82
PF02423	OCD_Mu_crystall	0.82
PF13493	DUF4118	0.82
PF02922	CBM_48	0.82
PF01042	Ribonuc_L-PSP	0.82
PF00903	Glyoxalase	0.82
PF01223	Endonuclease_NS	0.82
PF03544	TonB_C	0.82
PF00135	COesterase	0.82
PF08818	DUF1801	0.82
PF14552	Tautomerase_2	0.82
PF00012	HSP70	0.82
PF09209	CecR_C	0.82
PF01381	HTH_3	0.82
PF13533	Biotin_lipoyl_2	0.82
PF12840	HTH_20	0.82
PF02146	SIR2	0.82
PF04185	Phosphoesterase	0.82
PF13492	GAF_3	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0417	DNA polymerase B elongation subunit	Replication, recombination and repair [L]	8.20
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	5.74
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.64
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.82
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.82
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.82
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG1478	F420-0:Gamma-glutamyl ligase (F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.82
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	0.82
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.82
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.82
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.82
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.82
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.82
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.75 %
Unclassified	root	N/A	35.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.75 %
Unclassified	root	N/A	35.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.75 %
Unclassified	root	N/A	35.25 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.64 %
Unclassified	root	N/A	35.25 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	13.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	5.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.10 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.64 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.82 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.64 %
Starkeya	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya	0.82 %
unclassified Oxalobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae	0.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.64 %
unclassified Starkeya	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya	0.82 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	0.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.64 %
Starkeya sp. ORNL1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya → Starkeya sp. ORNL1	0.82 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	0.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10004244	All Organisms → cellular organisms → Bacteria → Proteobacteria	4271	Open in IMG/M
3300001593\|JGI12635J15846_10877410	Not Available	513	Open in IMG/M
3300002245\|JGIcombinedJ26739_100077305	All Organisms → cellular organisms → Bacteria → Proteobacteria	3083	Open in IMG/M
3300002245\|JGIcombinedJ26739_101844038	Not Available	506	Open in IMG/M
3300004080\|Ga0062385_10940342	Not Available	576	Open in IMG/M
3300004082\|Ga0062384_100746299	Not Available	679	Open in IMG/M
3300004091\|Ga0062387_100686802	Not Available	747	Open in IMG/M
3300004092\|Ga0062389_100020829	All Organisms → cellular organisms → Bacteria	4621	Open in IMG/M
3300004092\|Ga0062389_100115603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2424	Open in IMG/M
3300004092\|Ga0062389_100283293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1711	Open in IMG/M
3300004092\|Ga0062389_101109295	Not Available	977	Open in IMG/M
3300004092\|Ga0062389_101967353	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300004092\|Ga0062389_103318386	Not Available	603	Open in IMG/M
3300004635\|Ga0062388_100069099	All Organisms → cellular organisms → Bacteria → Proteobacteria	2398	Open in IMG/M
3300004635\|Ga0062388_102340754	Not Available	558	Open in IMG/M
3300005163\|Ga0066823_10034488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300005458\|Ga0070681_11584245	Not Available	580	Open in IMG/M
3300005541\|Ga0070733_10053131	All Organisms → cellular organisms → Bacteria → Proteobacteria	2538	Open in IMG/M
3300005546\|Ga0070696_100068876	All Organisms → cellular organisms → Bacteria	2485	Open in IMG/M
3300005591\|Ga0070761_10075142	All Organisms → cellular organisms → Bacteria → Proteobacteria	1920	Open in IMG/M
3300005921\|Ga0070766_10737217	Not Available	668	Open in IMG/M
3300005921\|Ga0070766_10824589	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005994\|Ga0066789_10030949	All Organisms → cellular organisms → Bacteria	2372	Open in IMG/M
3300005994\|Ga0066789_10183463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	884	Open in IMG/M
3300005995\|Ga0066790_10319620	Not Available	662	Open in IMG/M
3300006163\|Ga0070715_10364431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	793	Open in IMG/M
3300006175\|Ga0070712_101722251	Not Available	549	Open in IMG/M
3300009093\|Ga0105240_10254879	All Organisms → cellular organisms → Bacteria → Proteobacteria	2027	Open in IMG/M
3300009624\|Ga0116105_1024566	All Organisms → cellular organisms → Bacteria → Proteobacteria	1282	Open in IMG/M
3300009633\|Ga0116129_1011189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3472	Open in IMG/M
3300009633\|Ga0116129_1039072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1525	Open in IMG/M
3300009633\|Ga0116129_1051420	All Organisms → cellular organisms → Bacteria → Proteobacteria	1275	Open in IMG/M
3300009709\|Ga0116227_10243879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1384	Open in IMG/M
3300010371\|Ga0134125_10090719	All Organisms → cellular organisms → Bacteria → Proteobacteria	3398	Open in IMG/M
3300010396\|Ga0134126_12387597	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300012944\|Ga0137410_10081344	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300012944\|Ga0137410_12001542	Not Available	515	Open in IMG/M
3300013314\|Ga0175859_1078020	All Organisms → cellular organisms → Bacteria → Proteobacteria	1073	Open in IMG/M
3300014168\|Ga0181534_10005205	All Organisms → cellular organisms → Bacteria → Proteobacteria	7388	Open in IMG/M
3300014491\|Ga0182014_10008845	All Organisms → cellular organisms → Bacteria	10206	Open in IMG/M
3300015171\|Ga0167648_1075917	Not Available	729	Open in IMG/M
3300015206\|Ga0167644_1001538	All Organisms → cellular organisms → Bacteria → Proteobacteria	16007	Open in IMG/M
3300019787\|Ga0182031_1123454	Not Available	1237	Open in IMG/M
3300020021\|Ga0193726_1000177	All Organisms → cellular organisms → Bacteria → Proteobacteria	88052	Open in IMG/M
3300020579\|Ga0210407_10293330	All Organisms → cellular organisms → Bacteria → Proteobacteria	1270	Open in IMG/M
3300020582\|Ga0210395_10235315	Not Available	1376	Open in IMG/M
3300021168\|Ga0210406_10572382	Not Available	885	Open in IMG/M
3300021181\|Ga0210388_10006023	All Organisms → cellular organisms → Bacteria → Proteobacteria	9506	Open in IMG/M
3300021181\|Ga0210388_11317456	Not Available	609	Open in IMG/M
3300021401\|Ga0210393_10009434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7641	Open in IMG/M
3300021401\|Ga0210393_10354855	All Organisms → cellular organisms → Bacteria → Proteobacteria	1194	Open in IMG/M
3300021404\|Ga0210389_10244389	Not Available	1403	Open in IMG/M
3300021407\|Ga0210383_10268803	Not Available	1465	Open in IMG/M
3300021407\|Ga0210383_10281685	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300021420\|Ga0210394_11100105	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300021420\|Ga0210394_11144075	Not Available	670	Open in IMG/M
3300021433\|Ga0210391_10001628	All Organisms → cellular organisms → Bacteria → Proteobacteria	20165	Open in IMG/M
3300021433\|Ga0210391_10224913	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300021474\|Ga0210390_10600576	All Organisms → cellular organisms → Bacteria → Proteobacteria	923	Open in IMG/M
3300021478\|Ga0210402_11557797	Not Available	588	Open in IMG/M
3300021479\|Ga0210410_10220295	All Organisms → cellular organisms → Bacteria → Proteobacteria	1701	Open in IMG/M
3300024251\|Ga0247679_1029551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	924	Open in IMG/M
3300025463\|Ga0208193_1000796	All Organisms → cellular organisms → Bacteria → Proteobacteria	14995	Open in IMG/M
3300025463\|Ga0208193_1003160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6311	Open in IMG/M
3300025463\|Ga0208193_1051492	Not Available	902	Open in IMG/M
3300025679\|Ga0207933_1073797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	1129	Open in IMG/M
3300025703\|Ga0208357_1125289	Not Available	740	Open in IMG/M
3300025862\|Ga0209483_1014196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4294	Open in IMG/M
3300025913\|Ga0207695_10200151	All Organisms → cellular organisms → Bacteria → Proteobacteria	1912	Open in IMG/M
3300025916\|Ga0207663_10692620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300025949\|Ga0207667_12067185	Not Available	529	Open in IMG/M
3300026291\|Ga0209890_10005263	All Organisms → cellular organisms → Bacteria	5500	Open in IMG/M
3300027545\|Ga0209008_1008001	Not Available	2508	Open in IMG/M
3300027559\|Ga0209222_1005889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2622	Open in IMG/M
3300027559\|Ga0209222_1065681	Not Available	698	Open in IMG/M
3300027567\|Ga0209115_1024716	All Organisms → cellular organisms → Bacteria → Proteobacteria	1346	Open in IMG/M
3300027567\|Ga0209115_1063533	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300027575\|Ga0209525_1013355	All Organisms → cellular organisms → Bacteria → Proteobacteria	1982	Open in IMG/M
3300027609\|Ga0209221_1084625	Not Available	824	Open in IMG/M
3300027692\|Ga0209530_1031872	Not Available	1571	Open in IMG/M
3300027803\|Ga0209910_10050372	Not Available	513	Open in IMG/M
3300027853\|Ga0209274_10000051	All Organisms → cellular organisms → Bacteria → Proteobacteria	119113	Open in IMG/M
3300027867\|Ga0209167_10118022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1371	Open in IMG/M
3300027889\|Ga0209380_10516770	Not Available	696	Open in IMG/M
3300027895\|Ga0209624_10000310	All Organisms → cellular organisms → Bacteria → Proteobacteria	43453	Open in IMG/M
3300027895\|Ga0209624_10234595	All Organisms → cellular organisms → Bacteria → Proteobacteria	1219	Open in IMG/M
3300027908\|Ga0209006_10082380	All Organisms → cellular organisms → Bacteria → Proteobacteria	2863	Open in IMG/M
3300027908\|Ga0209006_10085007	All Organisms → cellular organisms → Bacteria	2814	Open in IMG/M
3300027908\|Ga0209006_10104633	Not Available	2507	Open in IMG/M
3300027908\|Ga0209006_10647850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	869	Open in IMG/M
3300028014\|Ga0265345_104366	Not Available	625	Open in IMG/M
3300028742\|Ga0302220_10360273	Not Available	524	Open in IMG/M
3300028773\|Ga0302234_10456275	Not Available	546	Open in IMG/M
3300028808\|Ga0302228_10191230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	934	Open in IMG/M
3300029910\|Ga0311369_10333304	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300029999\|Ga0311339_11054416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	757	Open in IMG/M
3300030020\|Ga0311344_11283338	Not Available	546	Open in IMG/M
3300030646\|Ga0302316_10181066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	869	Open in IMG/M
3300030687\|Ga0302309_10557334	Not Available	542	Open in IMG/M
3300031090\|Ga0265760_10009676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2753	Open in IMG/M
3300031231\|Ga0170824_117201996	All Organisms → cellular organisms → Bacteria → Proteobacteria	1625	Open in IMG/M
3300031469\|Ga0170819_15250731	Not Available	567	Open in IMG/M
3300031474\|Ga0170818_101437434	Not Available	930	Open in IMG/M
3300031474\|Ga0170818_103985504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	576	Open in IMG/M
3300031524\|Ga0302320_10357751	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300031708\|Ga0310686_102542070	Not Available	561	Open in IMG/M
3300031708\|Ga0310686_107545849	All Organisms → cellular organisms → Bacteria → Proteobacteria	8858	Open in IMG/M
3300031708\|Ga0310686_114311907	All Organisms → cellular organisms → Bacteria → Proteobacteria	2753	Open in IMG/M
3300031708\|Ga0310686_115352291	All Organisms → cellular organisms → Bacteria → Proteobacteria	950	Open in IMG/M
3300031708\|Ga0310686_119071248	All Organisms → cellular organisms → Bacteria → Proteobacteria	2616	Open in IMG/M
3300031715\|Ga0307476_10516987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	885	Open in IMG/M
3300031715\|Ga0307476_11084099	Not Available	588	Open in IMG/M
3300031718\|Ga0307474_10648630	Not Available	833	Open in IMG/M
3300031823\|Ga0307478_10168188	All Organisms → cellular organisms → Bacteria → Proteobacteria	1749	Open in IMG/M
3300031823\|Ga0307478_10987555	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300031962\|Ga0307479_10734269	All Organisms → cellular organisms → Bacteria → Proteobacteria	965	Open in IMG/M
3300032180\|Ga0307471_102497366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	654	Open in IMG/M
3300033180\|Ga0307510_10214222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1445	Open in IMG/M
3300033887\|Ga0334790_151395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya → Starkeya sp. ORNL1	697	Open in IMG/M
3300034163\|Ga0370515_0089368	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300034163\|Ga0370515_0271370	Not Available	719	Open in IMG/M
3300034282\|Ga0370492_0218489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	776	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.08%
Host-Associated	Host-Associated	4.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.51%
Aquatic	Environmental → Aquatic	15.57%
Plants	Host-Associated → Plants	4.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.49%
Freshwater	Environmental → Aquatic → Freshwater	15.57%
Peat	Environmental → Terrestrial → Peat	8.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.64%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.82%
Roots	Host-Associated → Plants → Roots	0.82%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.82%
Peat Moss	Host-Associated → Plants → Peat Moss	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.34%
Loam	Environmental → Terrestrial → Soil → Loam	22.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.20%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.10%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	14.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	9.02%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.28%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.46%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.64%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.64%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.64%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.82%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.82%
Moss Associated	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Moss Associated	0.82%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013314	Moss microbial communities from three moss species from boreal forest in Fairbanks, Alaska, USA Reanalysis	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300015171	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3a, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028014	Plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE2	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_100042444	3300001546	Forest Soil	VAPRRGSPRELRRCITLDFCKKVSTMKMRASELSNAGILGDGSLSIGFRSSTDTHTLELSRKAQEQLLPALLASEPANLQKFFTAADVQALLLNEGVLVTFAIAERIALRVLVTEPIRQKLLAQLSNVPAPAPPPA*
JGI12635J15846_108774101	3300001593	Forest Soil	SATDSHILELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFAIRGSVMVRILVPETSSHQLLALLTGWARRPEPAADDSRPSTDGTASGQ*
JGIcombinedJ26739_1000773053	3300002245	Forest Soil	SGGGGAAGLAPGAAPLHYTAPIFAKKVSTMKMRASELSNAGILGDGSLSIGFRSSTDTHTLELSRKAQEQLLPALLASEPANLQKFFTAADVQALLLNEGVLVTFAIAERIALRVLVTEPIRQKLLAQLSNVPAPAPPPA*
JGIcombinedJ26739_1018440381	3300002245	Forest Soil	ADCDQYSWKLLIYQWNFTRVTAMKMRASELSSAAILPDGSLSIGFRSATDGHTVELSRKAQEQLLPALLASEPANLQKFFTAADVQAQSVAEGVLFTFPIHGRVAVRILVPETNCHKLLALLTGWARRPDPAADNSSPAARNTPPEP*
Ga0062385_109403421	3300004080	Bog Forest Soil	HNWSYNSPTTMKMRASELNSAAVLPDGSMSIGFRSATDGHTLELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFPIRGSVTVRVLVPETSGHQLLALLTGWARRPEPAADDSRPSTDGTASEQ*
Ga0062384_1007462992	3300004082	Bog Forest Soil	MKMRASELSNAGILGDGSLSIGFRSSTDSHTLELSRKAQEQLLPALLASEPANLQKFFTAGDVQALQLKEGVLVSFVIAERIALRVLVTEPIRQQLLAQLTNVPAPMPPT*
Ga0062387_1006868021	3300004091	Bog Forest Soil	MKMRVSELGSAAILADGSLSIGFRSSTDTHTLELARRAQDQLLPALLASEPANLQKFFTARTVQSTVLQEGVLLSFLVREGVSIRVLVSESDRQNLLAQLTS
Ga0062389_1000208292	3300004092	Bog Forest Soil	MKMRAAELGSAAILADGSLSIGFRSSTDTHTLELARRAQEQLLPALLASEPANMQKFFTATTVQATLLSEGMLLNFLVREGVAIRVLISESARQNLLSQLTSLGPERSP*
Ga0062389_1001156031	3300004092	Bog Forest Soil	MKMRASELGSAAILSDGSLSIGFRSSTDTHTIELARRAQEQLLPALLASEPANLQKFFTAADVQSNLLTEGVLLTFPIRERVVIRILVSESIRQKLLAQLTGLGPPSSAK
Ga0062389_1002832933	3300004092	Bog Forest Soil	MKMRASELSSAAVLPDGSMSIGFRSATDGHTLELSRKAQEQLLPALLASEPANLHKFFTAADVQAQSVAEGVLLTFPIRGGVALRILVPETSSHQLLALLTGW
Ga0062389_1011092951	3300004092	Bog Forest Soil	AVLPDGSMSIGFRSATDGHTLELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFPIRGSVTVRVLVPETSGHQLLALLTGWARRPEPAADDSRPSTDGTASEQ*
Ga0062389_1019673532	3300004092	Bog Forest Soil	MKMRASELGSAAILADGSLSIGFRSATDTHTLELARKAQEQLLPALLASEPANLQKFFPAAAVQAILLPEGVLLTFRVREGIAIRVLVSESARQNLLAQLTSLGPARSESI*
Ga0062389_1033183862	3300004092	Bog Forest Soil	MKMRASELSNAGILGDGSLSIGFRSSTDSHTLELSRKAQEQLLPALLASEPANLQKFFTAGDVQALQLKEGLLVTFAIADRIALRVLLTEPIRQKLLAQMAGVPTPPPA*
Ga0062388_1000690994	3300004635	Bog Forest Soil	MKMRASELSSAAVLPDGSMSIGFRSATDGHTLELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFPIRGSVTVRVLVPETSGHQLLALLTGWARRPEPAADDSRPSTDGTASEQ*
Ga0062388_1023407542	3300004635	Bog Forest Soil	DGSLSIGFRSSTDSHTLELSRKAQEQLLPALLASEPANLQKFFTAGDVQALQLKEGLLVTFAIADRIALRVLLTEPIRQKLLAQMAGVPTPPPA*
Ga0066823_100344882	3300005163	Soil	MKMRASELSSAAILSDGSMSIGFRSSTDTHTLELARRAQEQLLPALLASEPANLQKFFTAADVQTHLTPEGVLMVFAIGERIALRVLLSESTRQKLLALLADPGPVS*
Ga0070681_115842451	3300005458	Corn Rhizosphere	MKMRASELVSAAILSDGSLSIGFRSATDGHTLELSRKSQEQLLPALLASEPANLQKFFPAADVQANSTTEGVLLTFPIREGIAVRVLLSETSRQKLLAQLAALAPAP*
Ga0070733_100531315	3300005541	Surface Soil	MKMRASELSNAGILGDGSLSIGFRSSTDSHTLELSRRAQEQLLPALLASEPANLQKFFTAGDVQAMHLKEGVMVTFAIAERIAVRVLVTEPIRQRLLAQLANVPTPSSAPPAPPT*
Ga0070696_1000688761	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKMRASELGSAAILSDGSLTIGFRSSTDTHTLELARKAQEQLLPALLASEPANLQKFFPAADVGTNVLAEGMLLTFPIREGIAIRILVSESTRQKLLAQLAGPAPAPA*
Ga0070761_100751423	3300005591	Soil	MKMRASELSNAGILGDGSLSVGFRSSTDSHTLELSRRAQEQLLPALLASEPANLQKFFTAADVQAMHLKEGVMVSFAIAENIALRVLVTEPIRQKLLAHLAGAPATAPPA*
Ga0070766_107372172	3300005921	Soil	MKMRASELSNAGILGDGSLSIGFRSSTDSHTLELSRRAQEQLLPALLASEPANLQKFFTPGDVQAMYLKEGVMVTFAIAERIAVRVLVTEPIRQKLLAQLMNVP
Ga0070766_108245892	3300005921	Soil	ASELSNAGILGDGSLSVGFRSSTDSHTLELSRRAQEQLLPALLASEPANLQKFFTAADVQAMHLKEGVMVSFAIAENIALRVLVTEPIRQKLLAHLAGAPATTPPA*
Ga0066789_100309491	3300005994	Soil	MKMRAAEIGSAAVDADGSLSIGFRSSTDNHTLELGRKAQEQLLPALLASEPANLQKFFTAVDVQANRLSQGVLLAFPVRGNIVIRILVSESTRQKLLTQLAGLGPETP*
Ga0066789_101834632	3300005994	Soil	MKMRASELSSAAIISDGSLSIGFRSSTDTHTIELARKAQEQLLPALLASEPTNLQKFFTAADVQTHLTPEGMLLVFPIGERIAIRVLVSESTRQKLLALLTGPGPTPDPLSA*
Ga0066790_103196201	3300005995	Soil	MKMRASELGSAAILSDGSLSIGFHSSTDAHTLELARKAQEQLLPALLASEPANLRKFFPAADVQTHVLSEGMLLTFSIREGIAIRILLSESTRQKLLGQLTGLDPALV*
Ga0070715_103644311	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKMRASELSSAAILSDGSMSIGFRSSTDTHTLELARKAQEQLLPALLASEPANLQKFFTAADVQTHLTPEGVLMVFAIGERIALRVLLSESTRQKLLALLADSGPVS*
Ga0070712_1017222511	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKMRASELSSAAILSDGSMSIGFRSSTDTHTLELARRAQEQLLPALLASEPANLQKFFTAADVQTHLTPEGVLMVFAIGERIALRVLLSESTRQKLLALLADPSPVS*
Ga0105240_102548792	3300009093	Corn Rhizosphere	MKMRASELVSAAILSDGSLSIGFRSATDGHTLELSRKSQEQLLPALLASEPANLRKFFPAADVQASSTTEGVLLTFPLREGIAVRVLLSETTRQKLLAQLAALAPAP*
Ga0116105_10245661	3300009624	Peatland	MVAGSPPRSRRCFTLPRFLKKKVTIMKMRASELSNAEILGDGSLSIGFRSSTDSHTLELSRKAQEQLLPALLASEPANLQKFFTATDVQAMYLKEGVLVTFAIADRIALRVLVTEPIRQKLLAQLTNVPAPA
Ga0116129_10111894	3300009633	Peatland	MKMRASELSSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLKKFFTATDVQAQSVAEGVLLTFPIRGSVAVRILVPETSSHQLLALLTGWARRPEPAADDSRPSTDGTASEQ*
Ga0116129_10390723	3300009633	Peatland	MKMRASELSSAAVLADGSMSIGFRNATDSHTLELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFPIRGSVAVRILLPETSSHQLLALLTGWARRPEPAADDSRPSADGTASGQ*
Ga0116129_10514202	3300009633	Peatland	MKMRASDLSSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFPIRGSVAVRILVPETSSHQLLALLTGWARRPEPPADDSRPSTDGTASGQ*
Ga0116227_102438792	3300009709	Host-Associated	MKMRASELGNAAILADGSLSIGFRSSTDHHTIELSRKAQEQLLPALLASEPANLQKFFTAADVQTSRLAADVLLTFPISQDIAIRILLPEALRRRLLAQLTGPFPSPPDSVEGA*
Ga0134125_100907192	3300010371	Terrestrial Soil	MKMRASELVSAAILSDGSLSIGFRSATDGHTLELSRKSQEQLLPALLASEPANLQKFFPAADVQANSTTEGVLLTFPIREGIAVRVLLSEPSRQKLLAQLAALAPAP*
Ga0134126_123875971	3300010396	Terrestrial Soil	MKMRASELVSAAILSDGSLSIGFRSATDGHTLELSRKSQEQLLPALLASEPANLQKFFPAADVQANSTTEGVLLTFPIREGIAVRVLLSETTRQKLLAQLAALAPAP*
Ga0137410_100813442	3300012944	Vadose Zone Soil	MKMRASELSSAAILSDGSLSIGFRSSTDTHTLELARKAQEQLLPALLASEPANLQKFFTAADVLTHSLSEGVLLTFAIEQRIAIRVLISESTRQKLLALLAGPGPASVT*
Ga0137410_120015421	3300012944	Vadose Zone Soil	DGSLSIGFRSTTDTHTIELARKAQEQLLPALLASEPANLQKFSTAADVQTHLTPEGVLMVFAVGERIAIRVLASESTRQKLLALLTGPSPADVSPGPAVS*
Ga0175859_10780202	3300013314	Moss Associated	MKMRASELGNAAILADGSLSIGFRSSTDQHTIELSRKAQEQLLPALLASEPANLQKFFTAADVQSSRVAEDVLLTFPIRQDIAIRILVPAALRRRLLAQLTGQFPPPPDLVEGA*
Ga0181534_100052059	3300014168	Bog	MKLRASELGSAAILSDGSLSIGFRSSTDNHTLDLARKAQEQLLPALLASEPANLQKFFTAAEVQTTLLSEGVLLTFAIREGIAIRILVSESMRQNLLLQLGRMGPPI*
Ga0182014_100088454	3300014491	Bog	MKMRAAEIGSAAIDAEGSLRIGFRSATDNHTLELARKAQEQLLPALLASEPANLKKFFTATDAHASLLPEGVLLTFPIRQGIAIRILIPESARQQLLAQLNGSGMATP*
Ga0167648_10759172	3300015171	Glacier Forefield Soil	MKMRAAEIGSAAVDAEGSLSIGFRSATDNHTLELARKAQEQLLPALLASEPANLQKFFTAVDVQANRLSEGVLLVFPIQGGIVIRILVSESICEKLLGQVKPETLP*
Ga0167644_100153812	3300015206	Glacier Forefield Soil	MKMRASELNSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLKKFFTAADVQAQAVAEGVLLTFPIRGSVAVRILVPETSSHQLLALLTGWARSPEPAADDSRPG*
Ga0182031_11234541	3300019787	Bog	MKMRASELVNASILSDGALSVGFRSSTDGHTLELSRKAQEQLLPALLASEPANLQKFFTAADVHGNLLSEGVLLTFPIREGIAVRVLVSEPNRQKLLAILNALEPKPAQPS
Ga0193726_100017710	3300020021	Soil	MKMRASELGSAAILSDGSLSIGFRSSTDNHTVELARKAQEQLLPALLASEPANLQKFFTAADVQTTVLAEGVLVVFTIAERLAVRVLLTDAVHQKLLLLLSGSSTAPPDPSAANSPPA
Ga0210407_102933302	3300020579	Soil	MKMRASEISSAAIDAEGSLSIGFRSATDHHTLELSRKAQEQLLPALIASEPANLQKFFTSVDVHTNLLSEGVLLVFPIVGSTAIRVLVSEPTRQKLLAQLTGMSPATP
Ga0210395_102353152	3300020582	Soil	MKMRASELSSAGILGDGSLSVGFRSSTDLHTLELSRKAQEQLLPALLASEPANLQKFFTAADVQALHLKEGLLVSFAIAERIVVRVLVTGPIREKLLALMTGIPAQAAPPAPSAPSAPSA
Ga0210406_105723822	3300021168	Soil	MKMRASELGSAAILADGSLSIGFRSSTDTHTLELARKAQEQLLPALLASEPANLQKFFPAAAVQANVMPEGVLLTFQVREGIAIRVLVSESARQNLLAQLSNLGPAPSS
Ga0210388_100060233	3300021181	Soil	MKMRASELRSAGILGDGSLSVGFRSSTDLHTLELSRKAQEQLLPALLASEPANLQKFFTAADVQALHLKEGLLVSFAIAERIVVRVLVTGPIREKLLALMTGIPAQAAPPAPSAPSAPSA
Ga0210388_113174561	3300021181	Soil	MKMRASELSSAAILPDGSLSIGFRSATDGHTVELSRKAQEQLLPALLASEPANLQKFFTAADVQAQSVAEGVLFTFPIHGRVAVRILVPETNCH
Ga0210393_100094346	3300021401	Soil	MKMRASELSNAGILGDGSLSIGFRSSTDSHTLELSRRAQEQLLPALLASEPANLQKFFTAGDVQAMHLKEGVMVTFAIAERIAVRVLVTEPIRQRLLAQLANVPAPSPAPPA
Ga0210393_103548552	3300021401	Soil	MKMRASEISSAAIDAEGSLSIGFRSATDHHTLELSRKAQEQLLPALIASEPANLQKFFTSVDVHTNLLSEGVLLVFPIVGSTAIRVLVSEPTRQKLLAQLAGMSPATP
Ga0210389_102443891	3300021404	Soil	MKMRASELSSAAILPDGSLSIGFRSATDGHTVELSRKAQEQLLPALLACEPANLQKFFTAADVQAQSVAEGVLFTFPIRGRVAVRILVPEANCHQLLALLTGWARRPEPAADNSSPAAQNTPPEP
Ga0210383_102688031	3300021407	Soil	MKLRAAEINSAAIDAEGSLSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLQKFFTSIDVQTNRLPEGALLVFPIVGSTAIRILVSESTRQKLLTQLTGLGPAAP
Ga0210383_102816852	3300021407	Soil	MKMRASEISSAAIDAEGSLSIGFRSATDHHTLELSRKAQEQLLPALIASEPANLQKFFTSVDVHTNRLSEGVLLVFPIVGSTAIRVLVSEPTRQKLLAQLTGMSPATP
Ga0210394_111001052	3300021420	Soil	MKMRASELGSAAILADGSLSIGFRSSTDTHTLELARKAQEQLLPALLASEPANLQKFFPAAAVQANLMPEGVLLTFQVREGIAIRVLVSESARQNLLAQLSNLGPAPSS
Ga0210394_111440751	3300021420	Soil	MPQGTLRVAHLHYTAPIFAKKVTIMKMRASELSNAGILTDGSLSIGFRSSTDSHTLELSRKAQEQLLPALLASEPANLQKFFTAGDVQALQLKEGVLVSFAIAERIALRVLLTQPILEKLLAQLTNLPSPPPAA
Ga0210391_100016289	3300021433	Soil	MKMRASELSSAGILGDGSLSVGFRSSTDLHTLELSRKAQEQLLPALLASEPANLQKFFTAADVQALHLKEGLLVSFAIAERIVVRVLVTGPIREKLLALMTGIPAQVAPPAPSAPSAPSA
Ga0210391_102249133	3300021433	Soil	MKMRASELSNAGILGDGSLSIGFRSSTDTHTLELSRKAQEQLLPALLASEPANLQKFFTAADVQALLLNEGVLVTFAIAERIALRVLVTEPIRQKLLAQLSNVPAPAPPPA
Ga0210390_106005762	3300021474	Soil	MKMRASELNSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLKKFFTAADVQAQAVAEGVLLTFPIRGSVAVRILVPETSSHRLLALLTGWARRPEPAADDSRPSTDGTASGQ
Ga0210402_115577972	3300021478	Soil	MKMRASELGSAAILADGSLSIGFQSSTDNHTLELARKAQEQLLPALLASEPANLQKFFPAADVQATLLSEGVLLTFPIKDRVTVRILVSESARQKLLAQLTALGAAVP
Ga0210410_102202952	3300021479	Soil	MKMRASEISSAAIDAEGSLSIGFRSATDHHTLELSRKAQEQLLPALIASEPANLQKFFTSVDVHTNLVSEGVLLVFPIVGSTAIRVLVSEPTRQKLLAQLTGMSPATP
Ga0247679_10295512	3300024251	Soil	HLMKMRASELSSAAILSDGSMSIGFRSSTDTHTLELARRAQEQLLPALLASEPANLQKFFTAADVQTHLTPEGVLMVFAIGERIALRVLLSESTRQKLLALLADSGPVS
Ga0208193_10007969	3300025463	Peatland	MKMRASELSSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLKKFFTATDVQAQSVAEGVLLTFPIRGSVAVRILVPETSSHQLLALLTGWARRPEPAADDSRPSTDGTASEQ
Ga0208193_10031606	3300025463	Peatland	MKMRASELNSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLKKFFTAADVQAQAVAEGVLLTFPIRGSVAVRILVPETSSHQLLALLTGWARRPEPAADDSRPG
Ga0208193_10514921	3300025463	Peatland	MKMRASELSSAAVLADGSMSIGFRNATDSHTLELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFPIRGSVAVRILLPETSSHQLLALLTGWARRPEPAADDSRPSADGTASGQ
Ga0207933_10737971	3300025679	Arctic Peat Soil	MKMRASELGSAGILADGSLTIGFRSSTDTHTLELSRKAQEQLLPALLASEPANLRKFFLAADIQINIMAEGMLLTFPIREGIAIRILVTEPIRQTLLAQLTGAVAPPSQPSTPP
Ga0208357_11252891	3300025703	Arctic Peat Soil	MKMRASELGSAGILADGSLTIGFRSSTDTHTLELSRKAQEQLLPALLASEPANLRKFFLAADVQINIMAEGMLLTFPIREGIAIRILVTEPIRQT
Ga0209483_10141968	3300025862	Arctic Peat Soil	MKMRASELGSAGILADGSLTIGFRSSTDTHTLELSRKAQEQLLPALLASEPANLRKFFLAADVQINIMAEGMLLTFPIREGIAIRILVT
Ga0207695_102001512	3300025913	Corn Rhizosphere	MKMRASELVSAAILSDGSLSIGFRSATDGHTLELSRKSQEQLLPALLASEPANLRKFFPAADVQASSTTEGVLLTFPLREGIAVRVLLSETTRQKLLAQLAALAPAP
Ga0207663_106926202	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKMRASELSSAAILSDGSMSIGFRSSTDTHTLELARRAQEQLLPALLASEPANLQKFFTAADVQTHLTPEGVLMVFAIGERIALRVLLSESTR
Ga0207667_120671852	3300025949	Corn Rhizosphere	MKMRASELVSAAILSDGSLSIGFRSATDGHTLELSRKSQEQLLPALLASEPANLQKFFPAADVQANSTTEGVLLTFPIREGIAVRVLLSETSRQKLLAQLAALAPAP
Ga0209890_100052637	3300026291	Soil	MKMRAAEIGSAAVDADGSLSIGFRSSTDNHTLELGRKAQEQLLPALLASEPANLQKFFTAVDVQANRLSQGVLLAFPVRGNIVIRILVSESTRQKLLTQLAGLGPETP
Ga0209008_10080011	3300027545	Forest Soil	MKMRASELSSAAVLPDGSMSIGFRSATDSHILELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFAIRGSVMVRILVPETSSHQLLALLTGWARRPEPAADDSRPSTDGTASGQ
Ga0209222_10058892	3300027559	Forest Soil	MSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFPIRGSVAVRILVPETSSHQLLALLTGWARRPEPAADDSRPSTDGTASGQ
Ga0209222_10656812	3300027559	Forest Soil	LLRRSDVHDPAPRLIWPAFFTKVTAMKMRASELNSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLKKFFTAADVQAQAVAEGVLLTFPIRGSVAVRILVPETSSHRLLALLTGWARRPEPAADDSRPG
Ga0209115_10247163	3300027567	Forest Soil	MRSGGGGAAGLAPGAAPLHYTAPIFAKKVSTMKMRASELSNAGILGDGSLSIGFRSSTDTHTLELSRKAQEQLLPALLASEPANLQKFFTAADVQALLLNEGVLVTFAIAERIALRVLVTEPIRQKLLAQLSNVPAPAPPPA
Ga0209115_10635331	3300027567	Forest Soil	MKMRASELSNAGILGDGSLSIGFRSSTDSHTLELSRRAQEQLLPALLASEPANLQKFFTPGDVQAMYLKEGVMVTFAIAERIAVRVLVTEPIRQ
Ga0209525_10133552	3300027575	Forest Soil	MKMRASELSSAAVLPDGSMSIGFRSATDSHILELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFPIRGSVVVRILLPETSSHQLLALLTGWARRPEPAADDSRPSTDGTASGQ
Ga0209221_10846251	3300027609	Forest Soil	MKMRASELSSAAVLPDGSMSIGFRSATDSHILELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFAIRGSVMVRILVPETSSHQLLALLTGWARRPEPAADDSR
Ga0209530_10318722	3300027692	Forest Soil	MKMRASELSSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLKKFFTATDVQAQSVAEGVLLTFAIRGSVAVRILVPETSSHQLLALLTGWARRPEPAADDSRPSTDGTASGQ
Ga0209910_100503722	3300027803	Thawing Permafrost	MKMRASELGSAAILADGSMSIGFRSSTDNHTLELSRKAQEQLLPALLASEPANLQKFFTAADVQSDLLAEGVLLTFPIRAGIAVRVLVSDAARRR
Ga0209274_1000005121	3300027853	Soil	MKMRASELSNAGILGDGSLSVGFRSSTDSHTLELSRRAQEQLLPALLASEPANLQKFFTAADVQAMHLKEGVMVSFAIAENIALRVLVTEPIRQKLLAHLAGAPATTPPA
Ga0209167_101180222	3300027867	Surface Soil	MKMRASELSNAGILGDGSLSIGFRSSTDSHTLELSRRAQEQLLPALLASEPANLQKFFTAGDVQAMHLKEGVMVTFAIAERIAVRVLVTEPIRQRLLAQLANVPTPSSAPPAPPT
Ga0209380_105167702	3300027889	Soil	MKMRASELSNAGILGDGSLSIGFRSSTDSHTLELSRRAQEQLLPALLASEPANLQKFFTPGDVQAMYLKEGVMVTFAIAERIAVRVLVTEPIRQKLLAQLMNVPSPTPPA
Ga0209624_1000031024	3300027895	Forest Soil	VAPRRGSPRELRRCITLDFCKKVSTMKMRASELSNAGILGDGSLSIGFRSSTDTHTLELSRKAQEQLLPALLASEPANLQKFFTAADVQALLLNEGVLVTFAIAERIALRVLVTEPIRQKLLAQLSNVPAPAPPPA
Ga0209624_102345953	3300027895	Forest Soil	MKMRASELSSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLKKFFTATDVQAQSVAEGVLLTFPIRGSVMVRILVPQTSSH
Ga0209006_100823803	3300027908	Forest Soil	MKMRASELSSAAILPDGSLSIGFRSATDGHTVELSRKAQEQLLPALLASEPANLQKFFTAADVQAQSVAEGVLFTFPIHGRVAVRILVPETNCHKLLALLTGWARRPDPAADNSSPAARNTPPEP
Ga0209006_100850073	3300027908	Forest Soil	MKMRASEISSAAIDAEGSLSIGFRSATDHHTLELSRKAQEQLLPALIASEPANLHKFFTSVDVQTTRLSEGVLLVFPIVGSTAIRVLVSESTRQKLLAELTGMSPPTP
Ga0209006_101046332	3300027908	Forest Soil	MKMRASELNSAAVLPDGSMSIGFRSATDSHTLELARKAQEQLLPALLASEPANLKKFFTAADVQAQAVAEGVLLTFPIRGSVAVRILVPETSSHRLLALLTGWARRPEPAADDSRPG
Ga0209006_106478501	3300027908	Forest Soil	SIGFRSATDSHTLELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFPIRGSVMVRILVPETSSHQLLALLTGWARRPEAAADDSRPSTDVTASEQ
Ga0265345_1043662	3300028014	Plant Litter	MKMRASELSSAAILSDGSLSIGFRSSTDTHTIELARKAQEQLLPALLASEPANLQKFFTAADVQTTSLSEGVLMTFPIEGRIAIRILVSESTRQKLLTLLTGPGATPA
Ga0302220_103602731	3300028742	Palsa	MKMRASELNSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLTKFFTAADVQAQAVAEGVLLTFPIRGSVAVRILVPETSSHRLLALLTGWARRPEPAADDSRPDEGA
Ga0302234_104562752	3300028773	Palsa	MKMRASELNSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLTKFFTAADVQAQAVAEGVLLTFPIRGSVAVRILVPETSSHRLL
Ga0302228_101912302	3300028808	Palsa	TKVTAMKMRASELNSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLTKFFTAADVQAQAVAEGVLLTFPIRGSVAVRILVPETSSHRLLALLTGWARRPEPAADDSRPDEGAN
Ga0311369_103333043	3300029910	Palsa	MKMRASELNSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLTKFFTAADVQAQAVAEGVLLTFPIRGSVAVRILVPETSSHRLLALLTG
Ga0311339_110544161	3300029999	Palsa	MKMRASELVSAAILTDGSLSIGFRSSTDNHTVELSRKAQEQLLPALLASEPANLRKFFTAADVQTNLMAEGVLLTFPIRPGIAVRILLSDAVRRKLLAELPDLSSPSQQAVDGM
Ga0311344_112833381	3300030020	Bog	RAAEIGSAAISADGLLSIGFRSSTDNHTLELGRRAQEQLLPALLASEPANLQKFFTATDVQTGLLSEGLLMSFAVRGGIAIRVLLPEETRQQLLAQLTGSGAASAGIAEPL
Ga0302316_101810661	3300030646	Palsa	MKMRASELNSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLTKFFTAADVQAQAVAEGVLLTFPIRGSVAVRILVPETSSHRL
Ga0302309_105573342	3300030687	Palsa	MKMRASELNSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLTKFFTAADVQAQAVAEGVLLTFPIRGSVAVRILVPETSSHRLLALLTGWARRPEP
Ga0265760_100096765	3300031090	Soil	MKMRASELSNAGILGDGSLSIGFRSSTDSHTLELSRRAQEQLLPALLASEPANLQKFFTPGDVETMYLKEGVMVSFAIAERIALRILVTEPIRQKLLAQLTNVPAPAPPA
Ga0170824_1172019962	3300031231	Forest Soil	MKMRASELASAAILSDGSLSIGFRSSTDNHTVELARKAQEQLLPALLASEPANLQKFFTAADAQTLVLAEGVLVAFTIAERLAVRILLTDAVRQKLLMLLTGTGAAPADASAANPAPA
Ga0170819_152507312	3300031469	Forest Soil	MKMRASELASAAILSDGSLSIGFRSSTDNHTVELARKAQEQLLPALLASEPANLQKFFTAADAQTLVLAEGVLVAFTIAERLAVRILLTDAVRQKLLMLLTGSGV
Ga0170818_1014374341	3300031474	Forest Soil	MKMRASELASAAILSDGSLSIGFRSSTDNHTVELARKAQEQLLPALLASEPANLQKFFTAADAQTLVLAEGVLVAFTIAERLAVRILLTDAVRQKLLMLLTGSGVAP
Ga0170818_1039855041	3300031474	Forest Soil	ISDGSLSIGFLSSTDTHTIELARKAQEQLLPALLASEPANLQKFFTAADVQTHLTPEGVLMVFAIGERIALRVLLSESTRQKLLALLADPGSVS
Ga0302320_103577514	3300031524	Bog	MKMRAAEIGSAAISADGLLSIGFRSSTDNHTLELGRRAQEQLLPALLASEPANLQKFFTATDVQTGLLSEGLLMSFAVRGGIAIRVLLPEETRQQLLAQLTGSGAASAGIAEPL
Ga0310686_1025420701	3300031708	Soil	MKMRASELGTATILPDGSLSIGFRSSTDTHTLELTRKAQEQLLPALLASEPANLQKFFTAADVHAGPLSEGVLLTFSIRGGIAIRVLVGSYLAG
Ga0310686_1075458498	3300031708	Soil	MKMRASELSNAGILGDGSLSIGFRSSTDSHTLELSRRAQEQLLPALLASEPANLQKFFTPGDVQAMHLKEGVMVTFAIAERIAVRVLVTEPIRQRLLAQLTNLPVPAPPA
Ga0310686_1143119072	3300031708	Soil	MKMRASELGTATILADGSLSIGFRSSTDTHTLELARKAQEQLLPALLASEPANLQKFFPAADVQVNRLAEGVLLTFAIQEGIAVRVLVPESARQKLLAQLSYGDSPT
Ga0310686_1153522912	3300031708	Soil	MKMRASELGTATILADGSLSIGFRSSTDTHTLELARKAQEQLLPALLASEPANLQKFFPAADVQVNRLAEGALLTFAIREGIAVRVLVPESARQKLLAQLSYGDSPT
Ga0310686_1190712486	3300031708	Soil	MKMRASELSSAAVLPDGSLSIGFRSATDGHTLELSRKAQEQLLPALLASEPANLQKFFTAADVQAQSVAEGVLFTFPIRGRVTVRILVPDTSCHKLLALLTGWARRPEPAADNPSPAAQSTPPEQ
Ga0307476_105169872	3300031715	Hardwood Forest Soil	MKMRASELSSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLKKFFTATDVQAQSVAEGVLLTFPIRGSVMVRILVPETSSHQLLALLTAWARRPEPAADGSRPSTDGTASGQ
Ga0307476_110840991	3300031715	Hardwood Forest Soil	MKMRASELSNAGILGDGSLSIGFRSSTDSHTLELSRRAQEQLLPALLASEPANLQKFFTAGDVQALQLKEGVLVSFAIAERIALRVLLTQPILQKLLAQL
Ga0307474_106486302	3300031718	Hardwood Forest Soil	MKMRASEISSAAIDAEGSLSIGFRSATDHHTLELSRKAQEQLLPALIASEPANLQKFFTSVDVHTNRLPEGVLLVFPIVGSTAIRVLVSEPTRQKLLAQLTGMSPATP
Ga0307478_101681883	3300031823	Hardwood Forest Soil	MKMRASELSSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLKKFFTATDVQAQSVAEGVLLTFPIRGSVMVRILVPETSSHQLLAL
Ga0307478_109875552	3300031823	Hardwood Forest Soil	ISSAAIDAEGSLSIGFRSATDHHTLELSRKAQEQLLPALIASEPANLQKFFTTVDVHTNRLPEGVLLVFPIVGSTAIRVLVSEPTRQKLLAQLTGMSPATP
Ga0307479_107342691	3300031962	Hardwood Forest Soil	MKMRASELSNAGILADGSLSIGFRSSTDSHTLELSRKAQEQLLPALLASEPANLQKFFTAGDVQALQLKEGVLVSFAIAERIALRVLLTQPILQKLLAQLTSLPSPPPPA
Ga0307471_1024973662	3300032180	Hardwood Forest Soil	ISDGSLSIGFRSSTDTHTIELARKAQEQLLPALLASEPANLQKFFTAADVQTHLTPEGVLMVFAVGERIAIRVLISESTRQKLLALLTGPSPA
Ga0307510_102142222	3300033180	Ectomycorrhiza	MKMRASELSSAAILSDGSMSIGFRSSTDTHTVELARKAQEQLLPALLASEPANLQKFFTAADVQTHLTPEGVLMVFAIGERIALRVLLSESTRQKLLALLADPGSVS
Ga0334790_151395_378_695	3300033887	Soil	AILSDGSLSVGFRSTTDNHTIELSRKAQEQLLPALLASEPANLRKFFTAADVQANLLSEGVLLTFPIQDGIAVRILLSESTRQQLLAQLTALGPAPLDRAPSDGR
Ga0370515_0089368_1_396	3300034163	Untreated Peat Soil	MMRGAPPGSAAALHCPDFCKKGDGMKMRASELSNAGILGDGSLSIGFRSSTDSHTLELSRKAQEQLLPALLASEPANLQKFFTAGDVQALQLKEGVLVSFAIAERIALRVLVTEPIRQKLLAQLSNVPAPVP
Ga0370515_0271370_341_718	3300034163	Untreated Peat Soil	MKMRASELSSAAVLPDGSMSIGFRSATDSHTLELSRKAQEQLLPALLASEPANLRKFFTATDVQAQSVAEGVLLTFPIRGSVVVRILLPETSSHQLLALLTGWARRPEPAADDSRPSTDGTASEQ
Ga0370492_0218489_384_761	3300034282	Untreated Peat Soil	MRYIEHSEQVRPMKMRASELGSAAILADGSMSIGFRSSTDNHTLELSRKAQEQLLPALLASEPANLQKFFTAADVQSDLLAEGVLLTFPIRAGIAVRVLVSDAARRKLLAELIRLDPPPQPVGSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071696

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences