NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F063781

Metagenome / Metatranscriptome Family F063781

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F063781
Family Type Metagenome / Metatranscriptome
Number of Sequences 129
Average Sequence Length 73 residues
Representative Sequence MDVSVEIHCETCGSANYSLPGGSGDDAPIRCNDCGAPQGTIGELRAALLAQALDHSAEALRRDLDRLLAAGL
Number of Associated Samples 92
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.17 %
% of genes near scaffold ends (potentially truncated) 19.38 %
% of genes from short scaffolds (< 2000 bps) 76.74 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.248 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(29.457 % of family members)
Environment Ontology (ENVO) Unclassified
(42.636 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(69.767 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.00%    β-sheet: 10.00%    Coil/Unstructured: 61.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF01244Peptidase_M19 34.88
PF08494DEAD_assoc 14.73
PF00313CSD 1.55
PF08448PAS_4 1.55
PF00011HSP20 1.55
PF03315SDH_beta 1.55
PF09140MipZ 1.55
PF02880PGM_PMM_III 0.78
PF12096DUF3572 0.78
PF01641SelR 0.78
PF08447PAS_3 0.78
PF12867DinB_2 0.78
PF04963Sigma54_CBD 0.78
PF06463Mob_synth_C 0.78
PF07030Phage_Mu_Gp36 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG2355Zn-dependent dipeptidase, microsomal dipeptidase homologPosttranslational modification, protein turnover, chaperones [O] 34.88
COG1201Lhr-like helicaseReplication, recombination and repair [L] 14.73
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 1.55
COG1192ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQCell cycle control, cell division, chromosome partitioning [D] 1.55
COG1760L-serine deaminaseAmino acid transport and metabolism [E] 1.55
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 0.78
COG0229Peptide methionine sulfoxide reductase MsrBPosttranslational modification, protein turnover, chaperones [O] 0.78
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 0.78
COG1508DNA-directed RNA polymerase specialized sigma subunit, sigma54 homologTranscription [K] 0.78
COG2896GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)Coenzyme transport and metabolism [H] 0.78
COG4387Mu-like prophage protein gp36Mobilome: prophages, transposons [X] 0.78

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.25 %
UnclassifiedrootN/A7.75 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001686|C688J18823_10377348All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300001989|JGI24739J22299_10041475Not Available1531Open in IMG/M
3300004153|Ga0063455_100987411All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas608Open in IMG/M
3300005093|Ga0062594_102488653All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria568Open in IMG/M
3300005328|Ga0070676_10140459All Organisms → cellular organisms → Bacteria → Proteobacteria1537Open in IMG/M
3300005329|Ga0070683_102121853All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria540Open in IMG/M
3300005339|Ga0070660_100005381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas8859Open in IMG/M
3300005339|Ga0070660_101559846All Organisms → cellular organisms → Bacteria → Proteobacteria562Open in IMG/M
3300005343|Ga0070687_100708412All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria704Open in IMG/M
3300005354|Ga0070675_101924306All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria545Open in IMG/M
3300005356|Ga0070674_102179529All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria506Open in IMG/M
3300005364|Ga0070673_100476678All Organisms → cellular organisms → Bacteria → Proteobacteria1126Open in IMG/M
3300005364|Ga0070673_101497517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria636Open in IMG/M
3300005367|Ga0070667_101789122All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria578Open in IMG/M
3300005441|Ga0070700_100446440All Organisms → cellular organisms → Bacteria → Proteobacteria983Open in IMG/M
3300005535|Ga0070684_100404358All Organisms → cellular organisms → Bacteria → Proteobacteria1259Open in IMG/M
3300005535|Ga0070684_101111660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria743Open in IMG/M
3300005535|Ga0070684_101933471All Organisms → cellular organisms → Bacteria → Proteobacteria557Open in IMG/M
3300005535|Ga0070684_102006835All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300005546|Ga0070696_100334513All Organisms → cellular organisms → Bacteria → Proteobacteria1169Open in IMG/M
3300005548|Ga0070665_100000148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae128573Open in IMG/M
3300005549|Ga0070704_102232461All Organisms → cellular organisms → Bacteria → Proteobacteria509Open in IMG/M
3300005564|Ga0070664_102244268All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas518Open in IMG/M
3300005578|Ga0068854_100836666All Organisms → cellular organisms → Bacteria → Proteobacteria805Open in IMG/M
3300005578|Ga0068854_101205828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria678Open in IMG/M
3300005840|Ga0068870_11192148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria551Open in IMG/M
3300005841|Ga0068863_100010506All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas8994Open in IMG/M
3300006031|Ga0066651_10001304All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae8499Open in IMG/M
3300006046|Ga0066652_100000005All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae613916Open in IMG/M
3300006237|Ga0097621_101730476All Organisms → cellular organisms → Bacteria → Proteobacteria595Open in IMG/M
3300006794|Ga0066658_10225178All Organisms → cellular organisms → Bacteria → Proteobacteria998Open in IMG/M
3300006871|Ga0075434_100276235All Organisms → cellular organisms → Bacteria → Proteobacteria1699Open in IMG/M
3300006914|Ga0075436_101225530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria567Open in IMG/M
3300009098|Ga0105245_10030987All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas4731Open in IMG/M
3300009098|Ga0105245_10478574All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1258Open in IMG/M
3300009148|Ga0105243_10373826All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1316Open in IMG/M
3300009148|Ga0105243_10502091All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1149Open in IMG/M
3300009551|Ga0105238_11590903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria683Open in IMG/M
3300010396|Ga0134126_10943795Not Available968Open in IMG/M
3300010399|Ga0134127_13397590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria521Open in IMG/M
3300010400|Ga0134122_11487950Not Available695Open in IMG/M
3300010401|Ga0134121_10552490All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1069Open in IMG/M
3300011196|Ga0137482_100751All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas4855Open in IMG/M
3300011241|Ga0137476_100006All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas5240Open in IMG/M
3300011244|Ga0137483_102099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2345Open in IMG/M
3300012668|Ga0157216_10208111All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria924Open in IMG/M
3300012958|Ga0164299_10871404All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria650Open in IMG/M
3300012977|Ga0134087_10099231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1218Open in IMG/M
3300013296|Ga0157374_11461552All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria707Open in IMG/M
3300013308|Ga0157375_11963790All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria695Open in IMG/M
3300014325|Ga0163163_11342112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria777Open in IMG/M
3300014325|Ga0163163_11419956Not Available756Open in IMG/M
3300014325|Ga0163163_11891408All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300015064|Ga0167641_108786All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1211Open in IMG/M
3300015064|Ga0167641_123109All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria592Open in IMG/M
3300015069|Ga0167633_100077All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas49344Open in IMG/M
3300015085|Ga0167632_1038714All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria614Open in IMG/M
3300015085|Ga0167632_1048574All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300015371|Ga0132258_10875194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2268Open in IMG/M
3300015371|Ga0132258_11030505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2080Open in IMG/M
3300015371|Ga0132258_12914906All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.1188Open in IMG/M
3300015373|Ga0132257_102058544All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria737Open in IMG/M
3300015374|Ga0132255_101743692All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria945Open in IMG/M
3300017965|Ga0190266_10000177All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Allosphingosinicella → Allosphingosinicella indica9871Open in IMG/M
3300018422|Ga0190265_10000320All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas37884Open in IMG/M
3300018422|Ga0190265_10000548All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas26553Open in IMG/M
3300018422|Ga0190265_10002272All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas12868Open in IMG/M
3300018422|Ga0190265_10046073All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3763Open in IMG/M
3300018422|Ga0190265_10889929All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1013Open in IMG/M
3300018422|Ga0190265_10965262All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria974Open in IMG/M
3300018422|Ga0190265_11579886All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria768Open in IMG/M
3300018422|Ga0190265_11774561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria726Open in IMG/M
3300018422|Ga0190265_13727024All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300018429|Ga0190272_10113843All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1774Open in IMG/M
3300018429|Ga0190272_10247662All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1334Open in IMG/M
3300018429|Ga0190272_11210780All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria743Open in IMG/M
3300018429|Ga0190272_11357224All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria711Open in IMG/M
3300018429|Ga0190272_11594596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria669Open in IMG/M
3300018429|Ga0190272_12952180All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria526Open in IMG/M
3300018432|Ga0190275_10000026All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas208924Open in IMG/M
3300018432|Ga0190275_10000036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas173744Open in IMG/M
3300018432|Ga0190275_10000116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas93989Open in IMG/M
3300018469|Ga0190270_11112739All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria824Open in IMG/M
3300018476|Ga0190274_10003497All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas9347Open in IMG/M
3300018476|Ga0190274_10158554All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1924Open in IMG/M
3300018476|Ga0190274_10384244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1353Open in IMG/M
3300018920|Ga0190273_11988264Not Available538Open in IMG/M
3300019377|Ga0190264_10282055All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria991Open in IMG/M
3300019377|Ga0190264_10439873All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria864Open in IMG/M
3300019377|Ga0190264_10490252All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria836Open in IMG/M
3300019377|Ga0190264_10498441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria832Open in IMG/M
3300019377|Ga0190264_10896928All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria692Open in IMG/M
3300019487|Ga0187893_10190750All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1591Open in IMG/M
3300020012|Ga0193732_1035005All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria866Open in IMG/M
3300020027|Ga0193752_1127982All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1015Open in IMG/M
3300020027|Ga0193752_1332728Not Available516Open in IMG/M
3300020034|Ga0193753_10119472Not Available1291Open in IMG/M
3300020059|Ga0193745_1000001All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas883719Open in IMG/M
3300020061|Ga0193716_1214983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria720Open in IMG/M
3300020070|Ga0206356_10646837All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2950Open in IMG/M
3300021384|Ga0213876_10042743All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2394Open in IMG/M
3300022756|Ga0222622_11316154All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria532Open in IMG/M
3300025893|Ga0207682_10001525All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae10675Open in IMG/M
3300025907|Ga0207645_10043411All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2877Open in IMG/M
3300025918|Ga0207662_10319657All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1036Open in IMG/M
3300025919|Ga0207657_10011117All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Allosphingosinicella → Allosphingosinicella indica8948Open in IMG/M
3300025919|Ga0207657_10223675All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1507Open in IMG/M
3300025921|Ga0207652_11472408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria585Open in IMG/M
3300025924|Ga0207694_11376497Not Available596Open in IMG/M
3300025926|Ga0207659_10961250All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria735Open in IMG/M
3300025927|Ga0207687_10436462All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1084Open in IMG/M
3300025935|Ga0207709_11084961All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria657Open in IMG/M
3300025940|Ga0207691_11340066All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria590Open in IMG/M
3300025944|Ga0207661_10569307All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1039Open in IMG/M
3300025960|Ga0207651_10448926All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1106Open in IMG/M
3300026041|Ga0207639_12189049All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300026075|Ga0207708_10193248All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1621Open in IMG/M
3300026088|Ga0207641_10200503All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1839Open in IMG/M
3300026116|Ga0207674_11344267All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria684Open in IMG/M
3300026306|Ga0209468_1001173All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas11719Open in IMG/M
3300027809|Ga0209574_10042476All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1131Open in IMG/M
3300028379|Ga0268266_10000754All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas43290Open in IMG/M
3300028790|Ga0307283_10015017Not Available1551Open in IMG/M
3300031164|Ga0307502_10114923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria573Open in IMG/M
3300031456|Ga0307513_10143196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2313Open in IMG/M
3300031740|Ga0307468_100548190All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria930Open in IMG/M
3300031944|Ga0310884_10553460All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria682Open in IMG/M
3300031996|Ga0308176_11332968Not Available763Open in IMG/M
3300034194|Ga0370499_0178680All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria562Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil29.46%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil6.98%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere5.43%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere5.43%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.65%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.10%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.10%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.88%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.88%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere2.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.55%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.55%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.55%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.55%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.55%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.55%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.78%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.78%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.78%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.78%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.78%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.78%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.78%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.78%

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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001989Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5Host-AssociatedOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011196Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 17 - S13.2.60.2.a - transect 2, repeat 2, age 113 years, surface depth)EnvironmentalOpen in IMG/M
3300011241Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 11 - S13.2.50.a - transect 2, age 50 years, surface depth).EnvironmentalOpen in IMG/M
3300011244Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 18 - S13.2.60.3.a - transect 2, repeat 3, age 113 years, surface depth)EnvironmentalOpen in IMG/M
3300012668Arctic soils microbial communities. Combined Assembly of 23 SPsEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015064Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7B, Adjacent to main proglacial river, mid transect (Watson river))EnvironmentalOpen in IMG/M
3300015069Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4C, Ice margin, adjacent to proglacial lakeEnvironmentalOpen in IMG/M
3300015085Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020027Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300020061Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300027809Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028790Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122EnvironmentalOpen in IMG/M
3300031164Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_SEnvironmentalOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300034194Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J18823_1037734823300001686SoilMDVSVEIHCESCGSANYSLAAGTSDDASIRCNDCGAEQGTIGALKAALLDHVLDHSAEALRSDLDRLLAAKL*
JGI24739J22299_1004147523300001989Corn RhizosphereMDVSVEIHCETCGSANYSLPEGEGDSASIRCNDCGAAQGTVGELREALLQQVFDHSAEALRRDLDRLLAARF*
Ga0063455_10098741123300004153SoilMDVSVEIHCETCGSANYSLPDGHADEAPIRCNDCGAPQGTIGELRANLLEQVLDHSAEALRRDLDRLLAARL*
Ga0062594_10248865323300005093SoilMDVSVEIHCESCGSANYSLPEGSGDEAPIRCNDCGAHQGTIGELRAALREQVLGHSAEALRRELERLL
Ga0070676_1014045923300005328Miscanthus RhizosphereMDVSVEIHCKSCGSANYSLPEGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL*
Ga0070683_10212185323300005329Corn RhizosphereMDVSVEIHCETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL*
Ga0070660_10000538113300005339Corn RhizosphereMDVSVEIHCESCGSANYSLPEGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL*
Ga0070660_10155984613300005339Corn RhizosphereMDVSVEIHCEACGSANYSLPDGQADEAPIRCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAAKL*
Ga0070687_10070841223300005343Switchgrass RhizosphereMDVSVEIHCELCGSANYSLPAGHEEDAPIRCNDCGAPQGTVGELREALAQQVFDHSAEALRRDLDRLLAARL*
Ga0070675_10192430613300005354Miscanthus RhizosphereMDISLEIHCESCGSANYSLPRGSGDEAPILCLDCGADQGSVGALKAELVAQALGRSAESLRLDVERLRGGAPHAG*
Ga0070674_10217952913300005356Miscanthus RhizosphereGYDPFKPGKGDRHMDISLEIHCETCGSANYSLPGGSGEDAPILCLDCGADQGSVGALKAELVARALGQSAESQRLDLERLRGDAPRPGRIDL*
Ga0070673_10047667823300005364Switchgrass RhizosphereMDVSVEIHCESCGSANYSLPQGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL*
Ga0070673_10149751723300005364Switchgrass RhizosphereMDISLEIHCESCGSANYSLPRGSGDEAPILCLDCGADQGSVGALKAELVAQALGRSAESLRLDVERLRGGAP
Ga0070667_10178912223300005367Switchgrass RhizosphereETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL*
Ga0070700_10044644013300005441Corn, Switchgrass And Miscanthus RhizosphereMDVSVEIHCESCGSANYSLPEGSGDEAPIRCNDCGAPQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL*
Ga0070684_10040435823300005535Corn RhizosphereMDITVEIHCESCGSANYSLPGGAEDGAPISCNDCGAPQGTIGELRAALLEQVIDHSAEALRRDLDRLLAAKL*
Ga0070684_10111166013300005535Corn RhizosphereMDVSVEIHCETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELREVLLQQALDHSAEALRRDLDRLLAARL*
Ga0070684_10193347113300005535Corn RhizosphereMDVSVEIHCEACGSANYSLPDGQADEAAIRCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAAKL*
Ga0070684_10200683513300005535Corn RhizosphereMDVSVEIHCETCGSANYSLPGGMEDEAQIHCNDCGAAQGTIGALRATLLEQVVDHSAEALRRDLDRLLAAKP*
Ga0070696_10033451313300005546Corn, Switchgrass And Miscanthus RhizosphereSSDAMDVSVEIHCESCGSANYSLPEGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL*
Ga0070665_1000001481053300005548Switchgrass RhizosphereMDVTVEIHCETCGSANYSLPEGNGDSGPIRCNDCGAPQGTIGELRAALLEQVFDHSAEALRRDLDRLLEAKL*
Ga0070704_10223246113300005549Corn, Switchgrass And Miscanthus RhizosphereMDVSVEIHCETCGSANYSLPGGMEDAAPIRCNDCGAPQGTIGELRATLLELVLDHSAEALRRDLDRLLAAKL*
Ga0070664_10224426823300005564Corn RhizosphereMDVSVEIHCEACGSANYSLRDGHDDHAPISCNDCGARQGTIGELRAALLQQVFDHSAEALRRDLDRLLAAKL*
Ga0068854_10083666623300005578Corn RhizosphereMDVSVEIHCEACGSANYSLPDGQADEAPIRCNDCGAAQGTIGELRATLLEQVFDHSAEALRRDLDRLLAAKL*
Ga0068854_10120582823300005578Corn RhizosphereMDVSVEIHCEACGSANYSLPGGNDDAAPIRCNDCGAPQGTIGELRAALLQQALDHSAEALRRDLDRLLAAKL*
Ga0068870_1119214823300005840Miscanthus RhizosphereSANYSLPDGQEDQAQIRCNDCDAPQGTIGELRAILLEQVVDHSAEALRRDLDRLLEVKL*
Ga0068863_10001050623300005841Switchgrass RhizosphereMDVSVEIHCETCGSANYSLPDGREDAAAIRCNDCGAPQGTIGELRATLLEQVFDHSAEALRRDLDRLLAAKL*
Ga0066651_1000130463300006031SoilMDVSVEIHCEACGSANYSLPPAGEPSDADPIRCNDCGAPQGTIGELKSALLQQVLDHSAEALRRDLDRLLAKP*
Ga0066652_1000000053683300006046SoilLGFGSREMDVSVEIHCEACGSANYSLPPAGEPSDADPIRCNDCGAPQGTIGELKSALLQQVLDHSAEALRRDLDRLLAKP*
Ga0097621_10173047623300006237Miscanthus RhizosphereMDVSVEVHCEACGSANYSLPDGGGDTAPIRCNDCGADQGTLGELRSLLDDFVVQHSAEALRRDLDRLLAAKL*
Ga0066658_1022517823300006794SoilMDVSVEIHCETCGSANYSLPDGEGDEAPIRCNDCGAPQGTIGELRAALLQQVFDHSAEALRRDLDRLLAARL*
Ga0075434_10027623523300006871Populus RhizosphereMDVSVEIHCETCGSANYSLPAGQEDDAPISCNDCGASQGTIGELRATLLQQVFDHSAEALRRDLDRLLAARL*
Ga0075436_10122553023300006914Populus RhizosphereMDVSVEIHCEACGSANYSLPAGQEDDAPISCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAAKL*
Ga0105245_1003098743300009098Miscanthus RhizosphereMDVSVEIHCEACGSANYSLPEDDRDEAPIRCNDCGAHQGTIGELRAALLQQVIDHSAEALRRDLDRVLAARL*
Ga0105245_1047857423300009098Miscanthus RhizosphereMDVIVEIHCETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL*
Ga0105243_1037382623300009148Miscanthus RhizosphereMDVSVEIHCEACGSANYSLPGGNDDAAPIRCNDCGAPQGTIGELRAVLLQQALDHSAEALRRDLDRLLAARL*
Ga0105243_1050209123300009148Miscanthus RhizosphereMDVSVEIHCEQCGSANYSLPGGHEDDAAIRCNDCGAHQGTIGELRAALREQVLGHSAEALRRELERLLAARL*
Ga0105238_1159090323300009551Corn RhizosphereMDVSVEIHCETCGSASYSLPGGHEDGGPIGCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL*
Ga0134126_1094379523300010396Terrestrial SoilMLYGKAMDVSVEIHCETCGSANYSLPEGEGDSASIRCNDCGAAQGTVGELREALLQQVFDHSAEA
Ga0134127_1339759013300010399Terrestrial SoilKPAKGRRLMDISLEIHCESCGSANYSLPRGSGDEAPILCLDCGADQGSVGALKAELAARALGRSAESLRLDVERLRGGAPHAG*
Ga0134122_1148795013300010400Terrestrial SoilMDVSVEIHCELCGSANYSLPGGHEDDAPIRCNDCGALQGTIGELRAALREQVLGHSAEALRRELERLLAAKL*
Ga0134121_1055249023300010401Terrestrial SoilMTMDVSVELHCEACGSANYGLPEGSGDAAPIRCNDCGASLGTVAELKAALFAEALAQSAESLRLGLARLGGGD*
Ga0137482_10075133300011196Glacier Forefield SoilMDVSVEIHCESCGSANYSLPEGAGEDAPILCNDCGADQGSVAELRAALAARALEQSAESLRRDLERLRGNDP*
Ga0137476_10000653300011241Glacier Forefield SoilMDVSVEIHCETCGSANYSLPEGNGDGGPIRCNDCGAPQGTIGELRAALLEQVLDHSAEALRRDLDRLLEAKL*
Ga0137483_10209933300011244Glacier Forefield SoilMDVSVEIHCETCGSANYSLPDGSADDAPIRCNDCGAPQGTIGELRAILLQQAIDHSAEALRRDLDRLLEAKL*
Ga0157216_1020811113300012668Glacier Forefield SoilGMDVSVEIHCEACGSANYSLPEGAAQDAPIRCNDCGADQGTVAALTAALIALTVERSAESLRRELDRLRRPGPGEVMH*
Ga0164299_1087140413300012958SoilHCETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL*
Ga0134087_1009923123300012977Grasslands SoilMDVSVEIHCETCGSANYSLPAGHEDAAPIRCNDCGAPQGTVGELRAALLQQVFDHSAEALRRDLDRLLAARL*
Ga0157374_1146155223300013296Miscanthus RhizosphereMDVSVEIHCETCGSANYSLPGGHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL*
Ga0157375_1196379023300013308Miscanthus RhizosphereMDVSVEIHCEACGSANYSLPGGSGDGAPIRCNDCGAPQGTIGELRVALLEQVLDHSAEALRRDLDRLLAAGL*
Ga0163163_1134211213300014325Switchgrass RhizosphereMDITVEIHCESCGSANYSLPGGAEDGAPISCNDCGAPQGTIGELRAALLEQVIDHSAEALRRDLDRLL
Ga0163163_1141995613300014325Switchgrass RhizosphereMMDVSVEIHCETCGSANYSLPDGQEDAAAIRCNDCGAPQGTIGELRATLLEQVFDHSAEALRRDLDRLLAAKL*
Ga0163163_1189140813300014325Switchgrass RhizosphereMDVSVEIHCENCGSANYSLRDGREDQAQIRCNDCDAPQGTIGELRAILLEQVVDHSAEALRRDLDRLLAAKL*
Ga0167641_10878623300015064Glacier Forefield SoilMDVSVEIHCETCGSANYSLPGGSGDDAPIRCNDCGAPQGTIGELRAALMEQVLDHSAEALRPAARGQAIAWP*
Ga0167641_12310923300015064Glacier Forefield SoilMDVSVEIHCEACGSANYSLPEGDGAEAPIRCNDCSAHQGTIGELRASLLQQVIDHSAEALRRDLDRLLAAKL*
Ga0167633_100077253300015069Glacier Forefield SoilMDVSVEIHCEACGSANYSLPNGAAEESAILCNDCGADQGSVAALKAALIAQALDHSAESLRRDLDRLRAPEA*
Ga0167632_103871423300015085Glacier Forefield SoilMDVSVEIHCETCGSANYSLPGGSGDDAPIRCNDCGAPQGTIGELRAALLAQALDHSAEALRRDLDRLLAAGL*
Ga0167632_104857413300015085Glacier Forefield SoilVSVEIHCEACGSANFSLPEGVGDAAPLRCNDCGASLGSVAELKAALIAEALAQSAESLRLGLARLGGAD*
Ga0132258_1087519413300015371Arabidopsis RhizosphereMDVSVEIHCEVCGSANYSLPETSEPADSDPIRCNDCGALQGTIGELKSALLQQVLDHSAEALRRDLDRLLARP*
Ga0132258_1103050523300015371Arabidopsis RhizosphereMDVSVEIHCELCGSANYSLPEGDEEGAAIRCNDCGAHQGTVGELKSLLLEAVRDHCAEALRRDLDRLLTKP*
Ga0132258_1291490633300015371Arabidopsis RhizosphereMAGLMDVSVEIHCEACGSANYSLPQAGEPADSDPIRCNDCGALQGTIGELRAALLQQVLDHSAEALRRDLDRLLTRP*
Ga0132257_10205854413300015373Arabidopsis RhizosphereMDVSVEIHCEVCGSANYSLPETSEPADSDPIRCNDCGALQGTIGELKSALLQQVLDHSAEALRRDLDRLLAWP*
Ga0132255_10174369213300015374Arabidopsis RhizosphereMDVSVEIHCEACGSANYSLPQGEGAESPIRCNDCGAHQGTVGELRSMLMDAVRDHSAEALRRDLDRLLTKP*
Ga0190266_1000017793300017965SoilMDVSVEIHCEVCGSANYSLPRGSESSDADPIGCNDCGARQGTIGELKAALLQQVLDHSAEALRRDLDRLLTKP
Ga0190265_1000032083300018422SoilMDVSVEIHCDACGSANYSLPDGSAGGTEIRCNDCGADQGTVDALRAALIGQALAQSAEALRRDLGRLGTVEPSE
Ga0190265_1000054843300018422SoilMDVSVEIHCEACGSANYSLEGFAGDVAEEAPIRCNDCGADQGTLGALKAALIAQAIAQSAEALRRDLDRLDNGV
Ga0190265_1000227293300018422SoilMDVSVEIHCEACGSANYSLPEGAAEQAPIRCNDCGADQGSVAELKAGLIAQALAQSAESLRRDLDKLNPEEPT
Ga0190265_1004607333300018422SoilMDVSVEIHCETCGSANYSLPGGVGDDALILCNDCGADQGNVAALKATMIAQALDHSAESLRRGLDKLTGLDLKT
Ga0190265_1088992923300018422SoilMDVSVDIHCDACGSANYSLPQGTGEEAPVRCNDCGTEQGSVADLKAMLVAKALDQSAESLRRRLDKLRGPDLKS
Ga0190265_1096526223300018422SoilMDVSVEIHCESCGSANYSLPAGAGEDAPILCNDCGAGQGSVAELKAALAAHALEQSAESLRRDLERLRDAGSGT
Ga0190265_1157988613300018422SoilMDVSVEIHCESCGSANYSLPDGSADDAPIRCNDCGAPQGTIGELRAALLDQAIDHSAEALRRDLDRLLAAKL
Ga0190265_1177456123300018422SoilMDVSVEIYCEACGSAHYSLPEGKGEDAPIRCNDCGADQGSVADLKAVLVAKALDQSAESLRRDLDKLSGLDLKT
Ga0190265_1372702423300018422SoilEIHCEACGSANYSLPEGTAQDAPIRCNDCGADQGTVAELTAALVALAVERSAQSLRRELDRLQGPGPGDVTH
Ga0190272_1011384323300018429SoilMDVSVEIHCDACGSANYSLPEGLGDGSPIRCNDCGADQGSVEELRAALLAQAIGHSAEALRQGLERIVSKEEN
Ga0190272_1024766223300018429SoilMDVSVEIHCEACGSANYSLPDGTAEDASILCNDCGAQQGSVAELEAALIAEALAQSAQSLLRGLDKLREAS
Ga0190272_1121078023300018429SoilMDVSVEIHCENCGSANYGLPDGSADEAPIRCNDCGAPQGTIGDLRAVLLEQVLDHSAEALRRDLDRVLAAKL
Ga0190272_1135722423300018429SoilMDVSVEINCEACGSANYSLPDGAGEDAPIRCNDCGADQGTVAELTAAMVALAVERSAESLRRELHRIGGPGPGDVKH
Ga0190272_1159459613300018429SoilMDVEVEIHCETCGSANYSLPDGGADDAEIRCMDCGARLGNIAELKAEMLEQAVLHSAEALRRDLDRLLAAAAPKSDAA
Ga0190272_1295218023300018429SoilMDVSVEIHCESCGSANYSLPEGAGEDAPILCNDCGADQGSVAELRAALAARALEQSAESLRREVERLREIDP
Ga0190275_10000026833300018432SoilMDISVEIHCEACGSANYSLPEGAAQDAPIRCNDCGADQGTVAALTAALIALTVERSAESLRSELDRLRGPGPGEVIH
Ga0190275_10000036403300018432SoilMDVSVEIHCESCGSANYSLPDGSADEAPIRCNDCGAPQGTIGELRAALLEQMLDHSAEALRRDLDRLLAAKL
Ga0190275_10000116263300018432SoilMDVSVEIHCDACGSANYSLPEGLGDGSAIRCNDCGADQGSVEELRAALLAQAIGHSAEALRQGLERIVSKEEN
Ga0190270_1111273913300018469SoilMDVSVEIHCEACGSANYSLPEGSAQDAPIRCNDCGADQGTVAALTAALIAVTVERSAESLRRELDRLRRPEPGEVVH
Ga0190274_1000349723300018476SoilMAGRDCPDPGKAMMDVSVEIHCDTCGSANYSLPDGIFDEAPIRCNDCGNVLGNVAELKAALIAGALDHSAEALRRDLGKLSNIEPS
Ga0190274_1015855423300018476SoilMDVSVEIHCENCGSANYSLPAGQEDKAPIRCNDCDAPQGSIGELKATLLEQVFDHSAEALRRDVDRLLAAKL
Ga0190274_1038424423300018476SoilMDISLEIHCETCGSANYSLPGGSGEDAPILCLDCGADQGSVGALKADLVARALGQSAESLRLDLERLQGDAPRPGRIDL
Ga0190273_1198826423300018920SoilMDVSVEIHCETCGSANYSLPDGTGDDAAIRCNDCGAPQGTIGELRAALLAQALDHSAEALRRD
Ga0190264_1028205523300019377SoilMDVSVEIHCEACGSANYSLPEGAAEDAPIRCNDCGADQGSVAELRAALVAEALAQSAESLRRGLDKLHEAS
Ga0190264_1043987323300019377SoilGSETKGRREMDASVEIHCEACGSANFRLPEGSGDDAPIRCNDCGADQGSVTELKAILIAQALRQSAEALRRDLDKLDGLDLKT
Ga0190264_1049025223300019377SoilMDVSVEIYCEACGSAHYSLPEGKDEDAPIRCNDCGADQGSVADLKAVLVAKALDQSAESLRRDLDKLSGLDLKT
Ga0190264_1049844123300019377SoilEIHCEACGSANYSLPEGVAQDAPIRCNDCGADQGTVAALTAALIALTEERSAESLRRELDRLRRPGPGEVIH
Ga0190264_1089692823300019377SoilMDVSVEIHCEACGSANYSLPEGAAQDAPIRCNDCGADQGTVAALTAALIALTVERSAESLRRELDRLRRPGPGEVIH
Ga0187893_1019075023300019487Microbial Mat On RocksMDVSVEMHCETCGSANYSLAGDGEAARLRCNDCGADQGSAGELEAALRQAALAQSAEALRRGLGRLRGSEEK
Ga0193732_103500523300020012SoilKKHDMDVSVEIHCETCGSANYSLPGGNGDDAPIRCNDCGAPQGTIGELRAELLGQVLDHSAEALRRDLDRLLAAKL
Ga0193752_112798223300020027SoilMDVTVEIHCEACGSANYSLPDGEADAAAISCNDCGAAQGTIGELRALLFQQVIDHSAEALRRDLDRLLAAGL
Ga0193752_133272813300020027SoilMDVSVEIHCETCGSANYSLPDGMEDEAAIRCNDCGAPQGSIGALRATLLEQVFDHSAEALRRDLDRLLAAKL
Ga0193753_1011947223300020034SoilHCEACGSANYSLPVEAAEDGPITCNDCGADQGSVAALKAALVAQVRAQSAETLRRDADRLRKAGE
Ga0193745_10000019683300020059SoilMDVSVEIHCETCGSANYSLPGGSGDDAPIRCNDCGAPQGTIGELRAALMEQVLDHSAEALRRDLDRLLAARL
Ga0193716_121498313300020061SoilMDVSVEIHCESCGSANYSLPEGVAEDAPILCNDCGADQGSVADLKAVLIAQAVDHSAESLRRGLDKLTGLDLKT
Ga0206356_1064683733300020070Corn, Switchgrass And Miscanthus RhizosphereMDVSVEIHCEACGSANYSLPDGQADEAPIRCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAAKL
Ga0213876_1004274323300021384Plant RootsVKAMDVSVEIHCETCGSANYSLPDGHGDESPIRCNDCGAPQGTIGELKAALVEQVFDHSAEALRRDLERLLAARL
Ga0222622_1131615413300022756Groundwater SedimentMDIILEIHCEICGSANYSLPGGSEDEGPISCNDCGAPQGTIGALKAALLEQFFDHSAEALRRDLDRLLAAKL
Ga0207682_1000152533300025893Miscanthus RhizosphereMDVSVEIHCESCGSANYSLPEGIADAAPIRCNDCGARSGSFAELKAALIAGALGHSAEALRRDLGKLSNIEPS
Ga0207645_1004341133300025907Miscanthus RhizosphereMDVSVEIHCKSCGSANYSLPEGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL
Ga0207662_1031965723300025918Switchgrass RhizosphereMDVSVEIHCELCGSANYSLPAGHEEDAPIRCNDCGAPQGTVGELREALAQQVFDHSAEALRRDLDRLLAARL
Ga0207657_1001111793300025919Corn RhizosphereMDVSVEIHCESCGSANYSLPEGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL
Ga0207657_1022367523300025919Corn RhizosphereMDVIVEIHCETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL
Ga0207652_1147240813300025921Corn RhizosphereMDVSVEIHCETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL
Ga0207694_1137649713300025924Corn RhizosphereMDASVEIHCEACGSANYSLPDGQADEAAIRCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAAK
Ga0207659_1096125023300025926Miscanthus RhizosphereMDISLEIHCESCGSANYSLPRGSGDEAPILCLDCGADQGSVGALKAELVAQALGRSAESLRLDVERLRGGAPHAG
Ga0207687_1043646223300025927Miscanthus RhizosphereHCEACGSANYSLPEDDRDEAPIRCNDCGAHQGTIGELRAALLQQVIDHSAEALRRDLDRVLAARL
Ga0207709_1108496113300025935Miscanthus RhizosphereMDVSVEIHCEACGSANYSLPGGNDDAAPIRCNDCGAPQGTIGELRAVLLQQALDHSAEALRRDLDRLLAARL
Ga0207691_1134006623300025940Miscanthus RhizosphereMDVSVEIHCETCGSANYSLPGGHEDDGPIVCNDCGAPQGTIGGLRAELREQVFGHSAEALRRDLD
Ga0207661_1056930723300025944Corn RhizosphereMDVSVEIHCEACGSANYSLPDGQADEAPIRCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAGRL
Ga0207651_1044892623300025960Switchgrass RhizosphereMDVSVEIHCESCGSANYSLPQGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL
Ga0207639_1218904913300026041Corn RhizosphereDVSVEIHCEACGSANYSLPDGQADEAPIRCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAAKL
Ga0207708_1019324823300026075Corn, Switchgrass And Miscanthus RhizosphereMDVSVEIHCESCGSANYSLPEGSGDEAPIRCNDCGAPQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL
Ga0207641_1020050323300026088Switchgrass RhizosphereMDVSVEIHCETCGSANYSLPDGREDAAAIRCNDCGAPQGTIGELRATLLEQVFDHSAEALRRDLDRLLAAKL
Ga0207674_1134426713300026116Corn RhizosphereSANYSLPGGAEDGAPISCNDCGAPQGTIGELRAALLEQVIDHSAEALRRDLDRLLAAKL
Ga0209468_100117373300026306SoilLGFGSREMDVSVEIHCEACGSANYSLPPAGEPSDADPIRCNDCGAPQGTIGELKSALLQQVLDHSAEALRRDLDRLLAKP
Ga0209574_1004247623300027809AgaveMDVSVEVHCEACGSANYSLAGDGEVARIHCNDCGADQGSVGDLKAALQQAALARSAEALRRDLGRLGNVKEER
Ga0268266_1000075443300028379Switchgrass RhizosphereMDVTVEIHCETCGSANYSLPEGNGDSGPIRCNDCGAPQGTIGELRAALLEQVFDHSAEALRRDLDRLLEAKL
Ga0307283_1001501713300028790SoilMDVSVEIHCENCGSANYSLPDGQEDQAQIRCNDCDAPQGTIAELRAILLEQVVDHSAEALRRDLDRLLAAKL
Ga0307502_1011492323300031164SoilMDVSVEIHCEACGSANYSLPGGVGEEAPIRCNDCGADQGLVGELKAALLARVLAQSAEALRGGLDKLGELDLKS
Ga0307513_1014319623300031456EctomycorrhizaLDISLEIHCETCGSANYSLPQGSGDDAPILCRDCGTEHGSVGALKAEMMAHALGQSAESLRLELERLRGQAPQAG
Ga0307468_10054819013300031740Hardwood Forest SoilMDISLEIHCETCGSANYSLPGGSGEDAPILCLDCGADQGSVGALKAELVARALGQSAESQRLDLERLRGDAPRPGRIDL
Ga0310884_1055346013300031944SoilMDVSVEIHCEVCGSANYSLPQAGEFSDADPIRCNDCGAPQGTIGELKAALLQQVLDHSAEALRRDLDRLLTKP
Ga0308176_1133296813300031996SoilMDVSVEIHCEACGSANYSLPEGHGDEAAISCNDYGAAQGTIGELKAALHQQVLDHSAEALRRDLDRLLAAKL
Ga0370499_0178680_249_4763300034194Untreated Peat SoilMDVSVEIHCDTCGSGNYSLPEGIGAEARRIHCNDCGADQGSVDELNATLQQAARANSAEALRRDLGRLGDGEEGR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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