NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F057939

Metagenome Family F057939

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F057939
Family Type Metagenome
Number of Sequences 135
Average Sequence Length 58 residues
Representative Sequence MQHSPMNLESIRRDIAERLRPSCRNMSEEEFEKMVARMALIEWKHLNDATPTSQMRSH
Number of Associated Samples 108
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 60.74 %
% of genes near scaffold ends (potentially truncated) 20.00 %
% of genes from short scaffolds (< 2000 bps) 77.04 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.519 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(30.370 % of family members)
Environment Ontology (ENVO) Unclassified
(32.593 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.481 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.02%    β-sheet: 0.00%    Coil/Unstructured: 56.98%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF14014DUF4230 23.70
PF01569PAP2 14.07
PF09335SNARE_assoc 2.96
PF02276CytoC_RC 2.22
PF13715CarbopepD_reg_2 2.22
PF07676PD40 2.22
PF00326Peptidase_S9 1.48
PF13366PDDEXK_3 0.74
PF11329DUF3131 0.74
PF07732Cu-oxidase_3 0.74
PF00775Dioxygenase_C 0.74
PF13345Obsolete Pfam Family 0.74
PF00355Rieske 0.74
PF00593TonB_dep_Rec 0.74
PF13229Beta_helix 0.74
PF14534DUF4440 0.74
PF11306DUF3108 0.74
PF06452CBM9_1 0.74
PF05649Peptidase_M13_N 0.74
PF07883Cupin_2 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 2.96
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 2.96
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 2.96
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 0.74
COG3485Protocatechuate 3,4-dioxygenase beta subunitSecondary metabolites biosynthesis, transport and catabolism [Q] 0.74
COG3590Predicted metalloendopeptidasePosttranslational modification, protein turnover, chaperones [O] 0.74

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.52 %
UnclassifiedrootN/A1.48 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090004|P1_DRAFT_NODE_263068_len_1167_cov_12_820909All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1217Open in IMG/M
3300000878|AL9A1W_1149347All Organisms → cellular organisms → Bacteria2169Open in IMG/M
3300000886|AL3A1W_1435646All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes573Open in IMG/M
3300000887|AL16A1W_10199918All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1158Open in IMG/M
3300001333|A21PFW6_1015960All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1040Open in IMG/M
3300001536|A1565W1_10406402All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes767Open in IMG/M
3300001536|A1565W1_12018014All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1021Open in IMG/M
3300001664|P5cmW16_1008724All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1936Open in IMG/M
3300002025|smpD1_1119409All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium746Open in IMG/M
3300004114|Ga0062593_101425716All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes742Open in IMG/M
3300004114|Ga0062593_101760897All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium679Open in IMG/M
3300004480|Ga0062592_101374546All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes671Open in IMG/M
3300005439|Ga0070711_102003566All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium509Open in IMG/M
3300005458|Ga0070681_10576749All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300005549|Ga0070704_102155782All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes518Open in IMG/M
3300005938|Ga0066795_10017225All Organisms → cellular organisms → Bacteria2027Open in IMG/M
3300006876|Ga0079217_10180867All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1056Open in IMG/M
3300006880|Ga0075429_101721339All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium544Open in IMG/M
3300006894|Ga0079215_10402117All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes809Open in IMG/M
3300006918|Ga0079216_11197695All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium610Open in IMG/M
3300007004|Ga0079218_13593418All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes526Open in IMG/M
3300007740|Ga0104326_116413All Organisms → cellular organisms → Bacteria1363Open in IMG/M
3300007819|Ga0104322_147217All Organisms → cellular organisms → Bacteria9790Open in IMG/M
3300007822|Ga0104325_127345All Organisms → cellular organisms → Bacteria2631Open in IMG/M
3300009143|Ga0099792_10296431All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium958Open in IMG/M
3300009553|Ga0105249_13073325All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium536Open in IMG/M
3300010039|Ga0126309_10130090All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1331Open in IMG/M
3300010399|Ga0134127_11630030All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium720Open in IMG/M
3300011003|Ga0138514_100128091All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium560Open in IMG/M
3300011431|Ga0137438_1067725All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300011991|Ga0120153_1006021All Organisms → cellular organisms → Bacteria3737Open in IMG/M
3300011991|Ga0120153_1071515All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium594Open in IMG/M
3300011994|Ga0120157_1000874All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis12593Open in IMG/M
3300012010|Ga0120118_1005054All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium4129Open in IMG/M
3300012011|Ga0120152_1066978All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1097Open in IMG/M
3300012014|Ga0120159_1026906All Organisms → cellular organisms → Bacteria2031Open in IMG/M
3300012019|Ga0120139_1040308All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1098Open in IMG/M
3300012200|Ga0137382_10097389All Organisms → cellular organisms → Bacteria1936Open in IMG/M
3300012203|Ga0137399_10005424All Organisms → cellular organisms → Bacteria7002Open in IMG/M
3300012208|Ga0137376_10015392All Organisms → cellular organisms → Bacteria5681Open in IMG/M
3300012208|Ga0137376_11070638All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes690Open in IMG/M
3300012285|Ga0137370_10272037All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1007Open in IMG/M
3300012349|Ga0137387_11238216All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium525Open in IMG/M
3300012685|Ga0137397_11280359All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium523Open in IMG/M
3300012918|Ga0137396_10036290All Organisms → cellular organisms → Bacteria3302Open in IMG/M
3300012957|Ga0164303_10757831All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes662Open in IMG/M
3300012960|Ga0164301_10301167All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300012986|Ga0164304_11797101All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium513Open in IMG/M
3300013294|Ga0120150_1015586All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1585Open in IMG/M
3300013294|Ga0120150_1022020All Organisms → cellular organisms → Bacteria1295Open in IMG/M
3300013503|Ga0120127_10104011All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium639Open in IMG/M
3300013758|Ga0120147_1003376All Organisms → cellular organisms → Bacteria4016Open in IMG/M
3300013765|Ga0120172_1013958All Organisms → cellular organisms → Bacteria2490Open in IMG/M
3300013766|Ga0120181_1043536All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1029Open in IMG/M
3300013770|Ga0120123_1179902All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium508Open in IMG/M
3300013772|Ga0120158_10026455All Organisms → cellular organisms → Bacteria4564Open in IMG/M
3300013772|Ga0120158_10085083All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1968Open in IMG/M
3300015086|Ga0167655_1023401All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1037Open in IMG/M
3300015162|Ga0167653_1037974All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes884Open in IMG/M
3300015191|Ga0167659_1035868All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1019Open in IMG/M
3300015193|Ga0167668_1000277All Organisms → cellular organisms → Bacteria9174Open in IMG/M
3300018000|Ga0184604_10010069All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1968Open in IMG/M
3300018000|Ga0184604_10139269All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes791Open in IMG/M
3300018000|Ga0184604_10144208All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes780Open in IMG/M
3300018000|Ga0184604_10174467All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium723Open in IMG/M
3300018000|Ga0184604_10323370All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium546Open in IMG/M
3300018027|Ga0184605_10003094All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae5712Open in IMG/M
3300018027|Ga0184605_10009041All Organisms → cellular organisms → Bacteria3746Open in IMG/M
3300018027|Ga0184605_10040344All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1960Open in IMG/M
3300018027|Ga0184605_10091118All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1338Open in IMG/M
3300018027|Ga0184605_10374735All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium640Open in IMG/M
3300018028|Ga0184608_10032391All Organisms → cellular organisms → Bacteria1975Open in IMG/M
3300018028|Ga0184608_10200829All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300018051|Ga0184620_10086830All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300018052|Ga0184638_1181902Not Available746Open in IMG/M
3300018054|Ga0184621_10182459All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium754Open in IMG/M
3300018061|Ga0184619_10413196All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium608Open in IMG/M
3300018066|Ga0184617_1068631All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes939Open in IMG/M
3300018071|Ga0184618_10159390All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium926Open in IMG/M
3300018071|Ga0184618_10437942All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes551Open in IMG/M
3300018075|Ga0184632_10024205All Organisms → cellular organisms → Bacteria2578Open in IMG/M
3300018076|Ga0184609_10254259All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes822Open in IMG/M
3300018076|Ga0184609_10314469Not Available732Open in IMG/M
3300018476|Ga0190274_10747591All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300019868|Ga0193720_1048031All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes603Open in IMG/M
3300019873|Ga0193700_1036262All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300019876|Ga0193703_1011002All Organisms → cellular organisms → Bacteria1358Open in IMG/M
3300019878|Ga0193715_1022335All Organisms → cellular organisms → Bacteria1373Open in IMG/M
3300019879|Ga0193723_1000237All Organisms → cellular organisms → Bacteria20508Open in IMG/M
3300019881|Ga0193707_1199683All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium511Open in IMG/M
3300019882|Ga0193713_1019451All Organisms → cellular organisms → Bacteria2019Open in IMG/M
3300019884|Ga0193741_1025689All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1516Open in IMG/M
3300019885|Ga0193747_1015826All Organisms → cellular organisms → Bacteria1843Open in IMG/M
3300019885|Ga0193747_1141929All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes553Open in IMG/M
3300019885|Ga0193747_1147090All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium538Open in IMG/M
3300019888|Ga0193751_1011435All Organisms → cellular organisms → Bacteria4652Open in IMG/M
3300020001|Ga0193731_1156247All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium556Open in IMG/M
3300020002|Ga0193730_1009155All Organisms → cellular organisms → Bacteria2787Open in IMG/M
3300020004|Ga0193755_1019977All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2212Open in IMG/M
3300020006|Ga0193735_1000113All Organisms → cellular organisms → Bacteria25200Open in IMG/M
3300020012|Ga0193732_1027521All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes983Open in IMG/M
3300020012|Ga0193732_1028573All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes964Open in IMG/M
3300020022|Ga0193733_1118426All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium733Open in IMG/M
3300021363|Ga0193699_10000252All Organisms → cellular organisms → Bacteria24144Open in IMG/M
3300021363|Ga0193699_10001878All Organisms → cellular organisms → Bacteria → Acidobacteria8207Open in IMG/M
3300021363|Ga0193699_10028946All Organisms → cellular organisms → Bacteria2065Open in IMG/M
3300021363|Ga0193699_10137043All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300021363|Ga0193699_10259200All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium724Open in IMG/M
3300021363|Ga0193699_10275309All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300021412|Ga0193736_1002564All Organisms → cellular organisms → Bacteria2126Open in IMG/M
3300022756|Ga0222622_11386400All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium517Open in IMG/M
3300025907|Ga0207645_11016502All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium561Open in IMG/M
3300025912|Ga0207707_10217536All Organisms → cellular organisms → Bacteria1663Open in IMG/M
3300027360|Ga0209969_1007746All Organisms → cellular organisms → Bacteria1518Open in IMG/M
3300027526|Ga0209968_1005488All Organisms → cellular organisms → Bacteria1906Open in IMG/M
3300027546|Ga0208984_1054922All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes851Open in IMG/M
3300027587|Ga0209220_1174511All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300027674|Ga0209118_1003920All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae5945Open in IMG/M
3300027678|Ga0209011_1168385All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium610Open in IMG/M
3300027695|Ga0209966_1036888All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1007Open in IMG/M
3300027738|Ga0208989_10060091All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300027738|Ga0208989_10099142All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes992Open in IMG/M
3300028536|Ga0137415_10064244All Organisms → cellular organisms → Bacteria3535Open in IMG/M
3300028536|Ga0137415_10780095All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes766Open in IMG/M
3300028711|Ga0307293_10077345All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1049Open in IMG/M
3300028768|Ga0307280_10087022All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1024Open in IMG/M
3300028791|Ga0307290_10300846All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium587Open in IMG/M
3300028799|Ga0307284_10050603All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1458Open in IMG/M
3300028814|Ga0307302_10377088All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes700Open in IMG/M
3300028824|Ga0307310_10023626All Organisms → cellular organisms → Bacteria2431Open in IMG/M
3300028878|Ga0307278_10158462All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1013Open in IMG/M
3300028880|Ga0307300_10179366All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium678Open in IMG/M
3300028884|Ga0307308_10486838All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium592Open in IMG/M
3300034268|Ga0372943_0665734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6686Open in IMG/M
3300034384|Ga0372946_0091193All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium1419Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil30.37%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost17.04%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment16.30%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.15%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.22%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.22%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil2.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.48%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.48%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.74%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.74%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.74%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.74%
Permafrost SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil0.74%
Permafrost And Active Layer SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil0.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.74%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.74%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.74%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.74%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090004Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1EnvironmentalOpen in IMG/M
3300000878Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300000886Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300000887Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001333Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001664Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembledEnvironmentalOpen in IMG/M
3300002025Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_D1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007740Permafrost core soil microbial communities from Svalbard, Norway - sample 2-9-2 SoapdenovoEnvironmentalOpen in IMG/M
3300007819Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 SoapdenovoEnvironmentalOpen in IMG/M
3300007822Permafrost core soil microbial communities from Svalbard, Norway - sample 2-8-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300011431Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2EnvironmentalOpen in IMG/M
3300011991Permafrost microbial communities from Nunavut, Canada - A34_65cm_12MEnvironmentalOpen in IMG/M
3300011994Permafrost microbial communities from Nunavut, Canada - A7_65cm_12MEnvironmentalOpen in IMG/M
3300012010Permafrost microbial communities from Nunavut, Canada - A7_35cm_12MEnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012014Permafrost microbial communities from Nunavut, Canada - A10_80cm_6MEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013294Permafrost microbial communities from Nunavut, Canada - A3_65cm_0MEnvironmentalOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300013758Permafrost microbial communities from Nunavut, Canada - A24_65cm_12MEnvironmentalOpen in IMG/M
3300013765Permafrost microbial communities from Nunavut, Canada - A30_80cm_6MEnvironmentalOpen in IMG/M
3300013766Permafrost microbial communities from Nunavut, Canada - A26_65cm_6MEnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300015086Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5c, rocky medial moraine)EnvironmentalOpen in IMG/M
3300015162Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015191Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-10 : a,b,c samples pooled, hydrological sediment from glacier outflow)EnvironmentalOpen in IMG/M
3300015193Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019868Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019876Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019884Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021412Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027360Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027526Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027546Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027695Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P1_DRAFT_010372102088090004SoilMQSPHNTKLEAIRRDIAERLRPTCADMPEEEFEKMVARMALIEWKHLNDATPTSQMRSH
AL9A1W_114934733300000878PermafrostMQQPSTNLESIRRDIAERLRPTCANMSEEEFEKMVARMALMEWKHINDATPTSRMQSH*
AL3A1W_143564613300000886PermafrostMQPPSTNLESIRRDIAERLRPSCVNMAEEDFEKMVARMALIEWKHLNDATPTSQMQSH*
AL16A1W_1019991813300000887PermafrostMQKPPTNLESIRRDIAERLRVTCADMPQEEFEKMVARMALIEWKHLNDATPTSQMISH*
A21PFW6_101596013300001333PermafrostMQQPPTKLESIRRDIAERLRPTCANMPAEEFEKMVARMALIEWKHLNDATPTSQMISH*
A1565W1_1040640213300001536PermafrostAEQLNKRTRMQSPPDNLESLRRDIAERLRPTCAHMPDDEFEKMVARIALIEWKHVNDATPTSQMLSR*
A1565W1_1201801413300001536PermafrostMQYRPLTLESILRDIAERLRPTCANMPEQEFEEMVARMALIEWKHLNDSTPTSQMISH*
P5cmW16_100872423300001664PermafrostMQQPYVNLESIRRDIAERLRPTCAHMSEDEFEKMVARIALIEWKHINDATPTSRMQSH*
smpD1_111940923300002025Permafrost And Active Layer SoilMESSPRANLQSIRRDIAERLRPTCANMSEEEFEKMVARMALIEWKHFNDATPTSRSNSH*
Ga0062593_10142571613300004114SoilMQHAQLNLESIRRDIAERLRPSCRNMPEDEFEKMVSRMALIEWKHLNDSTPTSQMRSH*
Ga0062593_10176089723300004114SoilMQYETLNLESIRRDIARRLRPSCANMPEEEFEKMVARMALIEWKHVNDSTPTSQMQSH*
Ga0062592_10137454623300004480SoilPKRTMQYETLNLESIRRDIARRLRPSCANMPEEEFEKMVARMALIEWKHVNDSTPTSQMQSH*
Ga0070711_10200356613300005439Corn, Switchgrass And Miscanthus RhizosphereMQPPPPNLESIRRDIAERLRPTCQNMSEEEFEKMVARIALIEWKHLNDATPTSQML
Ga0070681_1057674923300005458Corn RhizosphereMQYESTNLESIRRDIAKRLRASCASMPEEEFEKMVARMALIEWKHLNDSTPTSQMQSH*
Ga0070704_10215578223300005549Corn, Switchgrass And Miscanthus RhizosphereNLESIRRDIAKRLRASCASMPEEEFEKMVARMALIEWKHLNDATPTSQMQSH*
Ga0066795_1001722523300005938SoilMQSPHNTKLEAIRRDIAERLRPTCADMPEEEFEKMVARMALIEWKHLNDATPTSQMRSH*
Ga0079217_1018086723300006876Agricultural SoilMRPPITNLESIRRDIAERLRPSCAHMSEDEFDRMVTRMALIEWKHLNDATPTSQMHSR*
Ga0075429_10172133913300006880Populus RhizosphereMQYQTTNLESIRLDIAKRLRASCANMPEEEFEKMVARMALIEWKHLNDSTPTSQMQSH*
Ga0079215_1040211723300006894Agricultural SoilMRPPITNLESIRRDIAERLRPSCAHMSEDEFDRMVTRMALIEWKHLNDATPTSQMNSH*
Ga0079216_1119769513300006918Agricultural SoilMHMEHPLKNLESIRRDIAHRLRSTCANMSEEDFERMVARMALIEWKHLNDATPTSQMNSH
Ga0079218_1359341813300007004Agricultural SoilTVRRETQMRPPITNLESIRRDIAERLRPSCAHMSEDEFDRMVTRMALIEWKHLNDATPTSQMHSR*
Ga0104326_11641323300007740SoilMQMQLPTPNLESIRRDIAERLRPTCAQMSEDDFEKMVARMALIEWKHINDATPTSQMQSH
Ga0104322_14721723300007819Permafrost SoilMKLQPMTLESIRRDIAERLRPSCADMPQEEFDAMVARMALIEWKHINDSTPTSQMITH*
Ga0104325_12734533300007822SoilMQQPSTNLESIRRDIAERLRPTCANMSEEDFEKMVARMALIEWKHINDATPTSQMQSH*
Ga0099792_1029643123300009143Vadose Zone SoilMQNPPKNLESIRRDMAERLRPSCGHMSDEEFEKMVARMALIEWKHLNDATPTSQMQSH*
Ga0105249_1307332513300009553Switchgrass RhizosphereMQYQTTNLESIRRDIAKRLRASCANMPEEEFEKMVARMALIEWKHLNDSTPTSQMQSH*
Ga0126309_1013009013300010039Serpentine SoilEAIRRDIAKRLRPSCTNMPEEEFDKMVARMALIEWKHLNDSTPTSQMQSH*
Ga0134127_1163003013300010399Terrestrial SoilLDPAEQFDERRSMQHAQLNLESIRRDIAERLRPSCRNMPEDEFEKMVSRMALIEWKHLNDSTPTSQMRSH*
Ga0138514_10012809123300011003SoilMNLESIRRDIAERLRPSCRNMPEEEFEKMVARMALIEWKHLNDSTPTSQMRSH*
Ga0137438_106772523300011431SoilMQHVPLNLESIRRDIAERLRPSCRNMSEEEFEKMVARMALIEWKHLNDSTPTSQMRSH*
Ga0120153_100602113300011991PermafrostMQQPPTKLESIRRDIAERLRPTCANMPEEEFEKMVARMALIEWKHLNDTTPTSQMRSH*
Ga0120153_107151513300011991PermafrostMQHPLTNLKSIRRDIAERLRPTCADMPEEEFEKMVARMALIEWKHLNDATPTSQMISH*
Ga0120157_100087433300011994PermafrostMQQPPTKLESIRRDIAERLRPTCANMPEEEFEKMVARMALIEWKHLNDATPTSQMISH*
Ga0120118_100505413300012010PermafrostMQYRPLTLESILRDIAERLRPTCANMPEQEFEEMVARMALIEWKHLNDSTPT
Ga0120152_106697813300012011PermafrostESILRDIAERLRPTCANMPEQEFEEMVARMALIEWKHLNDSTPTSQMISH*
Ga0120159_102690633300012014PermafrostMQQPPTKLESIRRDIAERLRPTCANMPAEEFEKMVARMALIEWKHLNDATPT
Ga0120139_104030813300012019PermafrostMQMQLPTPNLESIRRDIAERLRPSCAQMSEDDFEKMVARMALIEWKHINDATPTSQMQSH
Ga0137382_1009738923300012200Vadose Zone SoilMQRAPKDLESIRRDIAERLRPTCRNMAEEEFEKMVARMALIEWKHLNDATPTSQMQSH*
Ga0137399_1000542413300012203Vadose Zone SoilMQQPYPNLESIRRDIAKRVRPTCANMPEEEFEKMVARMALIEWKHINDATPTSRRQSH*
Ga0137376_1001539243300012208Vadose Zone SoilMQRAPKDLESIRRDIAERLRPTCRNMAEEEFEKMVARMALIEWKHLNDATPTSQMQSP*
Ga0137376_1107063823300012208Vadose Zone SoilMQHAPLNLESIRRDIAKRLRPSCRNMSEEEFEKMVARMALIEWKHLNDATPTSQMRSH*
Ga0137370_1027203723300012285Vadose Zone SoilMQRAPQDLESIRRDIAERLRPTCRHMTDDEFDKMVARMALIEWKHLNDATPTSQMQSH*
Ga0137387_1123821613300012349Vadose Zone SoilMAQPPTNLESIRRDIAERLRPTCANMSQEEFEKMVARMALIEWKHQNDATPTSQMRSQ*
Ga0137397_1128035913300012685Vadose Zone SoilMQIPPKDLESIRRDIAKRLRLTCSNMSDEEFEKMVARMALIEWKHLNDATPPSQMQSH*
Ga0137396_1003629013300012918Vadose Zone SoilMQQPSTNLESIRRDIAERLRPTCANMSEEEFEKMVARMALIEWKHINDATPTSRMQSH*
Ga0164303_1075783123300012957SoilMHHSSKDLESIRRDLAERLRSTCTNMSDEDFEKMVARMALIEWKHLNDSTPTSQMQSH*
Ga0164301_1030116713300012960SoilMQPPPPNLESIRRDIAERLRPTCQNMSEEEFEKMVARIALIEWKHLNDATPTSQMLSH*
Ga0164304_1179710113300012986SoilMQSQPTISVESIRREIAERVRPACADMPPEEFETMVTRMALIEWKHFNDSTPTRRVGTALPKE*
Ga0120150_101558623300013294PermafrostMQQPPTKLESIRRDIAERLRPTCANMPEEEFEKMVARMALIEWKHLNDATPTSQMRSH*
Ga0120150_102202013300013294PermafrostMQKPPTNLESIRRDIAERLRVTCADMPQEEFEKMVARMALIEWKHLNNATPTSQMISH*
Ga0120127_1010401123300013503PermafrostMQMQQPYVNLESIRRDIAERLRPTCAHMSEDEFEKMVARIALIEWKHINDATPTSRMQSH
Ga0120147_100337613300013758PermafrostMQQPSTNLESIRRDIAERLRPTCANMSEEEFEKMVARMALMEWKHINDATPTSRM
Ga0120172_101395813300013765PermafrostQQPPTNLESIRRDITERLRPTCANMPEEEFEKMVARMALIEWKHLNDATPTSQMISH*
Ga0120181_104353623300013766PermafrostRRDIAERLRPTCANMPAEEFEKMVARMALIEWKHLNDATPTSQMISH*
Ga0120123_117990213300013770PermafrostMQLPTPNLESIRRDIAERLRPSCAQMSEDDFEKMVARMALIEWKHINDATPTSQMQSH*
Ga0120158_1002645553300013772PermafrostMQQPPTKLESIRRDIAERLRPTCANMPEEEFEKMVARMALIEWKHLNDSTPTSQMISH*
Ga0120158_1008508333300013772PermafrostMQHPLTNLKSIRRDIAERLRPTCANMPEEEFEKMVARMALIEWKHLNDATPTSQMRSH*
Ga0167655_102340113300015086Glacier Forefield SoilMQMQLPSTNLESIRRDIAERLRPTCANMSEDEFEKMVARMALIEWKHLNDATPTSQMLSR
Ga0167653_103797423300015162Glacier Forefield SoilMQMQPPSANLENIRRDIAERLRPTCAHMSEDEFEKMVARMALIEWKHINDSTPTSRMQSH
Ga0167659_103586813300015191Glacier Forefield SoilMQLPSTNLESIRRDIAERLRPTCANMSEDEFEKMVARMALIEWKHLNDATPTSQMLSR*
Ga0167668_100027743300015193Glacier Forefield SoilMQPPSTNLESIRRDIAERLRPTCANMSDEEFEKMVARMALIEWKHINDATPTSRMQSH*
Ga0184604_1001006933300018000Groundwater SedimentMQMEYPPTNLESIRRDIAQRLRPSCANMTDDEFEKMIARMALITWKYLNQGTPTSQMLSH
Ga0184604_1013926923300018000Groundwater SedimentMQHGHLNLESIRRDIAERLRPSCQNMPEDEFEKMVARMALIEWKHLNDSTPTSQMRSH
Ga0184604_1014420823300018000Groundwater SedimentMPMQHSPLNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDSTPTSQMRSR
Ga0184604_1017446713300018000Groundwater SedimentMPMQHSPLNLESIRRDIAERLRPSCLNMPEEEFEKMVARMALIEWKHLNDSTPTSQMRSH
Ga0184604_1032337013300018000Groundwater SedimentMQHSPMNLESIRRDIADRLRPSCRDMSEEEFEKMVARMALIEWKHLNDATPTSQMRSH
Ga0184605_1000309453300018027Groundwater SedimentMPDRIINLQSIRRDIAERLRPTCANMSEEEFEKMVARMALIEWKHFNDATPTRNLSHG
Ga0184605_1000904133300018027Groundwater SedimentMQHSPMNLESIRRDIADRLRPSCRDMSEEEFEKMVARMALIEWKHLNDSTPTSQMRSH
Ga0184605_1004034423300018027Groundwater SedimentMQHSPMNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDSTPTSQMRSH
Ga0184605_1009111823300018027Groundwater SedimentMQHPPTTLESIRRDIAERLRPACADMPQEEFEKMVARMALIEWKHLNDATPTSQMRAR
Ga0184605_1037473523300018027Groundwater SedimentMPQSPTNLESIRRDIAERLRPTCAHMSEEEFEKMVARMALIEWKHQNDATPTSQMRSR
Ga0184608_1003239113300018028Groundwater SedimentMNLESIRRDIAERLRPSCRNMSDEDFEKMVARIALIEWKHLNDSTPTSQMRSH
Ga0184608_1020082923300018028Groundwater SedimentMQHSPMNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDSTPT
Ga0184620_1008683023300018051Groundwater SedimentMQHSPMNLESIRRDIAERLRPSCRNMSEEEFEKMVARMALIEWKHLNDSTPTSQMRSR
Ga0184638_118190213300018052Groundwater SedimentMQSPPPNLESVRRDIAERLRPTCADMPEEEFEKMVDRMALIAWKYMNSGTPTSQMLTH
Ga0184621_1018245913300018054Groundwater SedimentMQHAPMNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDSTPTSQMRSR
Ga0184619_1041319613300018061Groundwater SedimentMQHSPMNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDATPTSQMRA
Ga0184617_106863113300018066Groundwater SedimentPMNLESIRRDIAERLRPSCRDMSDEEFDKMVARMALIEWKHLNDSTPTSRMRSH
Ga0184618_1015939023300018071Groundwater SedimentMQHPPTTLESIRRDIAERLRPACADMPQEEFEKMVARMALIEWKHQNDATPTSQMRSQ
Ga0184618_1043794213300018071Groundwater SedimentLIDERRKMQHSPKNLDLESIRRDIADRLRPTCSNMSDEDFEKMVARMALIEWKHLNDSTPTSQMQSH
Ga0184632_1002420523300018075Groundwater SedimentMQMEYPPTNLESIRRDIAQRLRPSCANMTDDEFEKMVARMALITWKYLNEGTPTSQMLSH
Ga0184609_1025425923300018076Groundwater SedimentMQHSPLNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDATPTSQMRSH
Ga0184609_1031446913300018076Groundwater SedimentMQMEYPPTNLESIRRDIAQRLRPSCANMTDDDFEKMVARMALITWKYLNEGTPTSQMLSH
Ga0190274_1074759123300018476SoilMQYKSMTLESIRRDIAKRLRPSCANMPEEEFEKMVARMALIEWKHVNDATPTSQMQSH
Ga0193720_104803113300019868SoilMLMQLPSTTLESIRRDIANRLRPTCANMSEEEFEKMVARMALIEWKHLNDATPTSRMQSH
Ga0193700_103626213300019873SoilMQHSPLNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDSTPTSQMRSR
Ga0193703_101100223300019876SoilMQMQHTTLNLESIRRDISARLRPACQNMPEDEFDKMVARMALIEWKHLNDSTPTSRMRSH
Ga0193715_102233513300019878SoilMQHSPLNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDATPTSQMRSY
Ga0193723_1000237163300019879SoilMNLESIRRDIAERLRPSCRNMSEEEFEKMVARMALIEWKHLNDATPTSQMRSH
Ga0193707_119968313300019881SoilMQHSPMNLESIRRDIAERLRPSCRNMSEEEFEKMVARMALIEWKHLNDAT
Ga0193713_101945113300019882SoilMHHSPKDLESIRRDIAERLRPTCMNMSDVDFEKMVARMALIEWKHLNDSTPTSQMQSH
Ga0193741_102568913300019884SoilNSAMQYESLNLESIRRDIAKRLRPTCADMPQDEFDKMVARMALIEWKHLNDATPTSQMQS
Ga0193747_101582623300019885SoilMQHSPLNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDSTPTSQMRSH
Ga0193747_114192923300019885SoilNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDATPTSQMRSH
Ga0193747_114709013300019885SoilMQHSPMNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDSTPTSQMRSR
Ga0193751_101143553300019888SoilMQQPSTNLESIRRAIAERLRPTCANMSEEEFEKMVARMALMEWKHINDATPTSRMQSH
Ga0193731_115624713300020001SoilMQHSPMNLESIRRDIAERLRPSCRNMSEEEFEKMVARMALIEWKHLNDATPTSQMRSH
Ga0193730_100915523300020002SoilMPMQHSPLNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDSTPTSQMRSH
Ga0193755_101997723300020004SoilMQHSPMNLESIRRDIADRLRPSCRNMPEDEFEKMVARMALIEWKHLNDATPTSQMRSH
Ga0193735_100011363300020006SoilMQHSPMNLESIRRDIAERLRPSCRDMAEEEFEKMVARMALIEWKHLNDSTPTSQMRSH
Ga0193732_102752123300020012SoilPMTTLSYLSIWSTNKRKMQNPPKNLESIRRDMAERLRPSCGHMSDDEFEKMVARMALIEWKHLNDATPTSQMQSH
Ga0193732_102857323300020012SoilQMQHSPLNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDATPTSQMRSH
Ga0193733_111842623300020022SoilMPQPPTNLESIRRDIAERLRPTCANMSEEEFEKMVARMALIEWKHQNDATPTSQMRSQ
Ga0193699_10000252203300021363SoilMQNPPRNLESIRRDMAERLRPSCGHMSDEEFEKMVARMALIEWKHLNDATPTSQMQSH
Ga0193699_1000187853300021363SoilMQHAPTNLESIRRDIAERLRPSCLNMPDDEFEKMVARMALIEWKHLNDSTPTSQMRSH
Ga0193699_1002894623300021363SoilMPMQHAPLNLESIRRDIAERLRPSCRNMSEEEFEKMVARIALIEWKHLNDATPTSQMRSH
Ga0193699_1013704323300021363SoilMLMQVPSTNLESIRRDIAERLRPACANMSEEDFEKMVARMALIEWKHLNDATPTSQMQSH
Ga0193699_1025920023300021363SoilMQMQVPTTNLESIRRDIAERLRPSCAHMSEDDFEKMVARMALIEWKHINDATPTSQMQSH
Ga0193699_1027530913300021363SoilMQMHPPSINLESIRRDIAERLRPTCAHMSEDEFEKMVARMALIEWKHLNDATPTSRMQSH
Ga0193736_100256413300021412SoilMQYESLNLESIRRDIAKRLRPTCADMPQDEFDKMVARMALIEWKHLNDATPTSQMQSH
Ga0222622_1138640013300022756Groundwater SedimentMQHAPMNLESIRRDIAERLRPSCGNMSEEDFEKMVARIALIEWKHLNDSTPTSQMRSR
Ga0207645_1101650213300025907Miscanthus RhizosphereMQYESTNLESIRRDIAKRLRASCASMPEEEFEKMVARMALIEWKHLNDSTP
Ga0207707_1021753613300025912Corn RhizosphereMQYESTNLESIRRDIAKRLRASCASMPEEEFEKMVARMALIEWKHLNDSTPTSQMQSH
Ga0209969_100774633300027360Arabidopsis Thaliana RhizosphereIRRDIARRLRPSCANMPEEEFEKMVARMALIEWKHVNDSTPTSQMQSH
Ga0209968_100548823300027526Arabidopsis Thaliana RhizosphereMQYETLNLESIRRDIARRLRPSCANMPEEEFEKMVARMALIEWKHVNDSTPTSQMQSH
Ga0208984_105492213300027546Forest SoilMQLPSTNLESIRHDIAERLRPSCANMSEEDFEKMVARMALIEWKHLNDATPTSQMQSH
Ga0209220_117451113300027587Forest SoilMQMQQPSTNLESIRRDIAQRLRLTCAHMSEDEFEKMVARMALIEWKHLNDATPTSQMQSH
Ga0209118_100392033300027674Forest SoilMQMQRPSTNLESIRRAIAQRLRPTCANMSEEEFERMVARMALIEWKHLNDATPTSRMQSR
Ga0209011_116838513300027678Forest SoilMQQPVTNLESIRRDIAERLRPTCANMSEEEFEKMVARMALMEWKHVNDATPTSRMQSH
Ga0209966_103688823300027695Arabidopsis Thaliana RhizospherePPKRTMQYETLNLESIRRDIARRLRPSCANMPEEEFEKMVARMALIEWKHVNDSTPTSQMQSH
Ga0208989_1006009123300027738Forest SoilMHQPATNLESIRRDIAQRLRPACANMSEEEFEKMVARMALMEWKHINDATPTSRMQSH
Ga0208989_1009914213300027738Forest SoilMQLPSTNLESIRRDITERLRPTCANMPEDEFEKMVARMALIEWKHLNDATPTSRMQSH
Ga0137415_1006424423300028536Vadose Zone SoilMQQPYPNLESIRRDIAKRVRPTCANMPEEEFEKMVARMALIEWKHINDATPTSRRQSH
Ga0137415_1078009523300028536Vadose Zone SoilMQQPSTNLESIRRDIAERLRPTCANMSEEEFEKMVARMALIEWKHINDATPTSRMQSH
Ga0307293_1007734523300028711SoilMQHSPMNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDATPTSQMRSH
Ga0307280_1008702223300028768SoilMQPPSTNLETIRRDIAERLRPSCANMAEEDFEKMVARMALIEWKHLNDSTPTSRMQSH
Ga0307290_1030084623300028791SoilMNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDSTPTSQMRSR
Ga0307284_1005060333300028799SoilMLMQPPSTNLETIRRDIAERLRPSCANMAEEDFEKMVARMALIEWKHLNDSTPTSRMQSH
Ga0307302_1037708813300028814SoilMQMEYPPQNLESIRRDIAQRLRPSCANMSDDEFDKMVARMALITWKYLNEGTPTSQMLSH
Ga0307310_1002362623300028824SoilMPMQHSPLNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDATPTSQMRSH
Ga0307278_1015846223300028878SoilMPMQHSPLNLESIRRDIAERLRPSCQDMSEEDFEKMVARMALIEWKHLNDSTPTSQMRSH
Ga0307300_1017936613300028880SoilMQHAPMNLESIRRDIAERLRPSCRNMSEEDFEKMVARMALIEWKHLNDATPTSQMRSH
Ga0307308_1048683813300028884SoilMQHSPMNLESIRRDIAERLRPSCRNMPEDEFEKMVARMALIEWKHLNDSTPTSQMRSH
Ga0372943_0665734_536_6853300034268SoilMERDFLHRQDLKTIRQEIAERLRPSCAHMSDEEFDTMVVRMALLEWKHLN
Ga0372946_0091193_168_3443300034384SoilMQLPSTNLESIRRDIADRLRPTCANMSEEEFEKMVARMALIEWKHLNDATPTSQMQSH

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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