Metagenome / Metatranscriptome Family F057299

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057299
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	48 residues
Representative Sequence	MANTAGEKELKTDWDELTASDSTKAVGHEQTLVAEEGTYVPKRYRVGI
Number of Associated Samples	83
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	28.68 %
% of genes near scaffold ends (potentially truncated)	20.59 %
% of genes from short scaffolds (< 2000 bps)	80.88 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.971 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (22.794 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (37.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.47% β-sheet: 0.00% Coil/Unstructured: 85.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF13385	Laminin_G_3	10.29
PF03237	Terminase_6N	2.94
PF02973	Sialidase	1.47
PF04860	Phage_portal	1.47
PF07484	Collar	0.74
PF00749	tRNA-synt_1c	0.74
PF07362	CcdA	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG4409	Neuraminidase (sialidase) NanH, contains C-terminal autotransporter domain	Cell wall/membrane/envelope biogenesis [M]	1.47
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.74
COG5302	Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid	Mobilome: prophages, transposons [X]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.97 %
All Organisms	root	All Organisms	36.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.97 %
cellular organisms	root	All Organisms → cellular organisms	25.00 %
Viruses	superkingdom	All Organisms → Viruses	11.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.97 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.29 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.29 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.94 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.74 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	19.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.29 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.94 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.74 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.97 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	19.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.29 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.74 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.74 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.74 %
candidate division WWE3	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WWE3	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.97 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	19.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.29 %
Kirjokansivirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales	0.74 %
candidate division WWE3 bacterium CG08_land_8_20_14_0_20_41_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WWE3 → candidate division WWE3 bacterium CG08_land_8_20_14_0_20_41_10	0.74 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.74 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.97 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	19.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.29 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.74 %
Graaviviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Graaviviridae	0.74 %
candidate division WWE3 bacterium CG08_land_8_20_14_0_20_41_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WWE3 → candidate division WWE3 bacterium CG08_land_8_20_14_0_20_41_10	0.74 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.97 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	19.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.29 %
Seejivirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Graaviviridae → Seejivirus	0.74 %
Parcubacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	0.74 %
candidate division WWE3 bacterium CG08_land_8_20_14_0_20_41_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WWE3 → candidate division WWE3 bacterium CG08_land_8_20_14_0_20_41_10	0.74 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.97 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	19.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.29 %
Seejivirus CGphi46	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Graaviviridae → Seejivirus → Seejivirus CGphi46	0.74 %
Parcubacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	0.74 %
candidate division WWE3 bacterium CG08_land_8_20_14_0_20_41_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WWE3 → candidate division WWE3 bacterium CG08_land_8_20_14_0_20_41_10	0.74 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918008\|ConsensusfromContig95649	Not Available	582	Open in IMG/M
3300001533\|MLSed_10051200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2249	Open in IMG/M
3300001533\|MLSed_10191266	Not Available	816	Open in IMG/M
3300004076\|Ga0055522_10054386	Not Available	788	Open in IMG/M
3300005077\|Ga0071116_1005476	Not Available	12155	Open in IMG/M
3300005470\|Ga0074646_122405	Not Available	686	Open in IMG/M
3300005613\|Ga0074649_1035639	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Graaviviridae → Seejivirus → Seejivirus CGphi46	2393	Open in IMG/M
3300005915\|Ga0075122_10016188	All Organisms → Viruses → Predicted Viral	3699	Open in IMG/M
3300005935\|Ga0075125_10107638	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300005935\|Ga0075125_10137319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1036	Open in IMG/M
3300005935\|Ga0075125_10259993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	698	Open in IMG/M
3300005935\|Ga0075125_10326248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	603	Open in IMG/M
3300006733\|Ga0098068_1001371	Not Available	8848	Open in IMG/M
3300006733\|Ga0098068_1005141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3836	Open in IMG/M
3300006733\|Ga0098068_1029430	All Organisms → Viruses → Predicted Viral	1128	Open in IMG/M
3300006805\|Ga0075464_11096273	Not Available	502	Open in IMG/M
3300008255\|Ga0100403_1108585	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1068	Open in IMG/M
3300008450\|Ga0114880_1077146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1339	Open in IMG/M
3300009149\|Ga0114918_10355453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	807	Open in IMG/M
3300009149\|Ga0114918_10417521	Not Available	729	Open in IMG/M
3300009149\|Ga0114918_10734017	Not Available	516	Open in IMG/M
3300009285\|Ga0103680_10223905	Not Available	999	Open in IMG/M
3300009480\|Ga0127405_1151563	Not Available	616	Open in IMG/M
3300009666\|Ga0116182_1280489	Not Available	695	Open in IMG/M
3300009669\|Ga0116148_1119506	Not Available	1252	Open in IMG/M
3300009669\|Ga0116148_1194593	Not Available	887	Open in IMG/M
3300009673\|Ga0116185_1302905	Not Available	687	Open in IMG/M
3300009676\|Ga0116187_1174626	Not Available	1023	Open in IMG/M
3300009720\|Ga0116159_1068366	Not Available	1731	Open in IMG/M
3300010330\|Ga0136651_10083273	All Organisms → Viruses → Predicted Viral	1697	Open in IMG/M
3300010342\|Ga0116252_10302586	Not Available	947	Open in IMG/M
3300010357\|Ga0116249_11587215	Not Available	580	Open in IMG/M
3300013089\|Ga0163203_1064725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1074	Open in IMG/M
3300013098\|Ga0164320_10672430	Not Available	546	Open in IMG/M
(restricted) 3300013122\|Ga0172374_1137855	Not Available	909	Open in IMG/M
(restricted) 3300013122\|Ga0172374_1231719	Not Available	663	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10246298	Not Available	1089	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10687413	Not Available	601	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10922700	Not Available	504	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10374590	Not Available	918	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10396235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	887	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10913385	Not Available	538	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10496945	Not Available	781	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10785233	Not Available	593	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10269604	Not Available	1214	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10633042	Not Available	723	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10767800	Not Available	643	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10885923	Not Available	591	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10973378	Not Available	559	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10993002	Not Available	553	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10223164	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1437	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10557242	Not Available	750	Open in IMG/M
3300014204\|Ga0172381_10028867	Not Available	4948	Open in IMG/M
3300014204\|Ga0172381_10129998	All Organisms → Viruses → Predicted Viral	2068	Open in IMG/M
3300014204\|Ga0172381_10242584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1442	Open in IMG/M
3300014204\|Ga0172381_10507508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	931	Open in IMG/M
3300014204\|Ga0172381_10790400	Not Available	712	Open in IMG/M
3300014204\|Ga0172381_10839053	Not Available	687	Open in IMG/M
3300014204\|Ga0172381_11120736	Not Available	576	Open in IMG/M
3300014205\|Ga0172380_10818517	Not Available	667	Open in IMG/M
3300014656\|Ga0180007_10029523	Not Available	4204	Open in IMG/M
3300014656\|Ga0180007_10106824	Not Available	1863	Open in IMG/M
3300014656\|Ga0180007_10304085	Not Available	986	Open in IMG/M
3300014656\|Ga0180007_10371298	Not Available	874	Open in IMG/M
3300014656\|Ga0180007_10437943	Not Available	791	Open in IMG/M
3300014656\|Ga0180007_10580251	Not Available	670	Open in IMG/M
3300014656\|Ga0180007_10691023	Not Available	605	Open in IMG/M
3300017987\|Ga0180431_10503978	Not Available	843	Open in IMG/M
3300020074\|Ga0194113_10308011	Not Available	1199	Open in IMG/M
3300020083\|Ga0194111_10197654	Not Available	1473	Open in IMG/M
3300020083\|Ga0194111_10824724	Not Available	557	Open in IMG/M
3300022552\|Ga0212118_10101044	All Organisms → Viruses → Predicted Viral	1697	Open in IMG/M
3300022821\|Ga0222673_1006618	All Organisms → Viruses → Predicted Viral	2362	Open in IMG/M
3300022890\|Ga0222667_1030294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1097	Open in IMG/M
(restricted) 3300023177\|Ga0233423_10446714	Not Available	549	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10001852	Not Available	10624	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10029285	All Organisms → Viruses → Predicted Viral	2201	Open in IMG/M
3300023246\|Ga0222682_1007276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2303	Open in IMG/M
(restricted) 3300024259\|Ga0233437_1246871	Not Available	724	Open in IMG/M
3300024262\|Ga0210003_1378998	Not Available	519	Open in IMG/M
3300025018\|Ga0210043_1085821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	950	Open in IMG/M
3300025038\|Ga0208670_100386	Not Available	12511	Open in IMG/M
3300025065\|Ga0208015_1016184	Not Available	1260	Open in IMG/M
3300025720\|Ga0208197_1225645	Not Available	567	Open in IMG/M
3300025724\|Ga0208196_1256157	Not Available	520	Open in IMG/M
3300025736\|Ga0207997_1090373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1037	Open in IMG/M
3300025896\|Ga0208916_10240662	Not Available	786	Open in IMG/M
3300027740\|Ga0214474_1276172	Not Available	599	Open in IMG/M
(restricted) 3300027861\|Ga0233415_10017711	All Organisms → Viruses → Predicted Viral	2819	Open in IMG/M
(restricted) 3300027861\|Ga0233415_10291741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	768	Open in IMG/M
(restricted) 3300027995\|Ga0233418_10031365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1404	Open in IMG/M
(restricted) 3300027996\|Ga0233413_10219292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	804	Open in IMG/M
3300028276\|Ga0268282_1134116	Not Available	544	Open in IMG/M
3300028298\|Ga0268280_1009308	All Organisms → Viruses → Predicted Viral	3648	Open in IMG/M
3300028298\|Ga0268280_1059252	Not Available	1089	Open in IMG/M
(restricted) 3300028564\|Ga0255344_1191216	Not Available	803	Open in IMG/M
(restricted) 3300028581\|Ga0247840_10375666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	701	Open in IMG/M
(restricted) 3300028593\|Ga0255347_1358865	Not Available	583	Open in IMG/M
(restricted) 3300029268\|Ga0247842_10010872	Not Available	8921	Open in IMG/M
(restricted) 3300029268\|Ga0247842_10194730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1143	Open in IMG/M
3300029288\|Ga0265297_10013548	Not Available	9577	Open in IMG/M
3300029288\|Ga0265297_10047811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3823	Open in IMG/M
3300029288\|Ga0265297_10349705	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WWE3 → candidate division WWE3 bacterium CG08_land_8_20_14_0_20_41_10	1009	Open in IMG/M
3300031227\|Ga0307928_10003996	Not Available	11235	Open in IMG/M
3300031227\|Ga0307928_10035575	All Organisms → Viruses → Predicted Viral	3278	Open in IMG/M
3300031227\|Ga0307928_10054677	All Organisms → Viruses → Predicted Viral	2519	Open in IMG/M
3300031227\|Ga0307928_10068868	All Organisms → Viruses → Predicted Viral	2177	Open in IMG/M
3300031227\|Ga0307928_10179854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1146	Open in IMG/M
3300031227\|Ga0307928_10199140	All Organisms → Viruses → Predicted Viral	1068	Open in IMG/M
3300031227\|Ga0307928_10348305	Not Available	713	Open in IMG/M
3300031227\|Ga0307928_10426854	Not Available	613	Open in IMG/M
3300031227\|Ga0307928_10479219	Not Available	561	Open in IMG/M
3300031227\|Ga0307928_10490959	Not Available	551	Open in IMG/M
3300031351\|Ga0307427_1060179	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1014	Open in IMG/M
3300031368\|Ga0307429_1186662	Not Available	537	Open in IMG/M
3300031379\|Ga0307434_1052599	Not Available	1274	Open in IMG/M
3300031707\|Ga0315291_11339571	Not Available	575	Open in IMG/M
3300031707\|Ga0315291_11346350	Not Available	573	Open in IMG/M
3300031772\|Ga0315288_10011269	Not Available	11259	Open in IMG/M
3300031772\|Ga0315288_10706648	Not Available	949	Open in IMG/M
3300031952\|Ga0315294_10495035	All Organisms → Viruses → Predicted Viral	1120	Open in IMG/M
3300031997\|Ga0315278_11672665	Not Available	606	Open in IMG/M
3300031999\|Ga0315274_11404972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	672	Open in IMG/M
3300032053\|Ga0315284_10242533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2303	Open in IMG/M
3300032053\|Ga0315284_11097198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	886	Open in IMG/M
3300032118\|Ga0315277_10716585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	960	Open in IMG/M
3300032156\|Ga0315295_11235761	Not Available	731	Open in IMG/M
3300032164\|Ga0315283_10835321	Not Available	985	Open in IMG/M
3300032177\|Ga0315276_12050015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	583	Open in IMG/M
3300032401\|Ga0315275_10460159	Not Available	1426	Open in IMG/M
3300032516\|Ga0315273_10011407	All Organisms → cellular organisms → Bacteria	11368	Open in IMG/M
3300032516\|Ga0315273_10955532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1101	Open in IMG/M
3300032516\|Ga0315273_11771807	Not Available	745	Open in IMG/M
3300033407\|Ga0214472_10624520	Not Available	987	Open in IMG/M
3300033489\|Ga0299912_10800377	Not Available	721	Open in IMG/M
3300034073\|Ga0310130_0155898	Not Available	701	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.09%
Engineered	Engineered	16.91%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	79.41%
Solid Waste	Engineered → Solid Waste	8.09%
Wastewater	Engineered → Wastewater	7.35%
Terrestrial	Environmental → Terrestrial	3.68%
Built Environment	Engineered → Built Environment	1.47%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	42.65%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	18.38%
Marine	Environmental → Aquatic → Marine	17.65%
Landfill	Engineered → Solid Waste → Landfill	8.09%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	7.35%
Soil	Environmental → Terrestrial → Soil	2.94%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	1.47%
Unclassified	Environmental → Aquatic → Unclassified	0.74%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.74%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	33.09%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	17.65%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	8.09%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	7.35%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	6.62%
Oceanic	Environmental → Aquatic → Marine → Oceanic	6.62%
Inlet	Environmental → Aquatic → Marine → Inlet	4.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.21%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.21%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.21%
Coastal	Environmental → Aquatic → Marine → Coastal	1.47%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	1.47%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.74%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.74%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	22.79%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	16.91%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	10.29%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	8.09%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	7.35%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	6.62%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	4.41%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	3.68%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.21%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.21%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	2.21%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.21%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.47%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	1.47%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	0.74%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.74%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.74%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.74%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.74%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	22.79%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	11.76%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	8.09%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.35%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	7.35%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	5.15%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	4.41%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.68%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	3.68%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.94%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	2.94%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.21%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	1.47%
Benthic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Benthic	1.47%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.47%
Marine Hydrothermal Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Hydrothermal Vent	1.47%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	1.47%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	0.74%
Sinkhole	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Sinkhole	0.74%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.74%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.74%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.74%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment	0.74%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.74%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.74%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.74%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300001533	Benthic freshwater microbial communities from British Columbia, Canada	Environmental	Open in IMG/M
3300004076	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqB_D2	Environmental	Open in IMG/M
3300005077	Water filled karst sinkhole microbial communities from Little Salt Spring, North Port, Florida - Phototrophic mat 2014	Environmental	Open in IMG/M
3300005470	Saline benthic water microbial community from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300005915	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKB	Environmental	Open in IMG/M
3300005935	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKN	Environmental	Open in IMG/M
3300006733	Marine viral communities from Cariaco Basin, Caribbean Sea - 26B_WHOI_OMZ_CsCl	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300008255	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01t	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009285	Microbial communities from groundwater in Rifle, Colorado, USA - 2A_0.1um	Environmental	Open in IMG/M
3300009480	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 10m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009673	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA7_MetaG	Engineered	Open in IMG/M
3300009676	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA6_MetaG	Engineered	Open in IMG/M
3300009720	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG	Engineered	Open in IMG/M
3300010330	Marine hydrothermal vent microbial communities from Guaymas Basin, Gulf of California to study Microbial Dark Matter (Phase II) - Marker 14 Mat core 4569-2 3-6 cm metaG	Environmental	Open in IMG/M
3300010342	AD_JPNAca1	Engineered	Open in IMG/M
3300010357	AD_USSTca	Engineered	Open in IMG/M
3300013089	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_330m	Environmental	Open in IMG/M
3300013098	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cm	Environmental	Open in IMG/M
3300013122 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10.3m	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013128 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cm	Environmental	Open in IMG/M
3300013129 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cm	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300013133 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2	Environmental	Open in IMG/M
3300013137 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1m	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014205	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaG	Engineered	Open in IMG/M
3300014656	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PC_MetaG	Environmental	Open in IMG/M
3300017987	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaG	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300022552	Guaymas_combined assembly	Environmental	Open in IMG/M
3300022821	Saline water microbial communities from Ace Lake, Antarctica - #801	Environmental	Open in IMG/M
3300022890	Saline water microbial communities from Ace Lake, Antarctica - #657	Environmental	Open in IMG/M
3300023177 (restricted)	Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_112_MG	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300023246	Saline water microbial communities from Ace Lake, Antarctica - #1008	Environmental	Open in IMG/M
3300024259 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MG	Environmental	Open in IMG/M
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental	Open in IMG/M
3300025018	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01t (SPAdes)	Environmental	Open in IMG/M
3300025038	Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsCl (SPAdes)	Environmental	Open in IMG/M
3300025065	Marine viral communities from Cariaco Basin, Caribbean Sea - 26B_WHOI_OMZ_CsCl (SPAdes)	Environmental	Open in IMG/M
3300025720	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025724	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA7_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025736	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKN (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027740	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq	Environmental	Open in IMG/M
3300027861 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MG	Environmental	Open in IMG/M
3300027995 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MG	Environmental	Open in IMG/M
3300027996 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MG	Environmental	Open in IMG/M
3300028276	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_120m	Environmental	Open in IMG/M
3300028298	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_40m	Environmental	Open in IMG/M
3300028564 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant18	Engineered	Open in IMG/M
3300028581 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_17m	Environmental	Open in IMG/M
3300028593 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant24	Engineered	Open in IMG/M
3300029268 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_19m	Environmental	Open in IMG/M
3300029288	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91	Engineered	Open in IMG/M
3300031227	Saline water microbial communities from Ace Lake, Antarctica - #232	Environmental	Open in IMG/M
3300031351	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-190	Environmental	Open in IMG/M
3300031368	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-230	Environmental	Open in IMG/M
3300031379	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-220	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_04252680	2140918008	Soil	MANTKGEKELKTSWDALTASDSTKAVGHEQNLIPEKSFVPQRNRVGL
MLSed_100512002	3300001533	Benthic	MANTLREKELKTSWDELTASDSTKAVGHNKKLIPEEKSLIPEREKKGL*
MLSed_101912663	3300001533	Benthic	MANTHGEKELRTDWDELTASDETKAVGHEQSLVAEEGSNYNRHW
Ga0055522_100543862	3300004076	Natural And Restored Wetlands	MADTKGEADLRTSYDELTASDETKRVGHKQNLIAEEGSLVYRRNKTGM*
Ga0071116_10054768	3300005077	Sinkhole	MANTHREKELMTEWDELTATDETKFIGHKQSLVAEEGSNVNRNWKKGL*
Ga0074646_1224052	3300005470	Saline Water And Sediment	MANTFGEKELRTDWDELTDSDSTKAVGHEQTLRATEGTFVFRRDRVGIE*
Ga0074649_10356392	3300005613	Saline Water And Sediment	MAGVNAGTIGTKEIKTDWDELTASDSTKAVGHEQTLVATEGSFVPRRLRVGIG*
Ga0075122_100161884	3300005915	Saline Lake	MANTVGEKELKTDWDELTASDSTKREGHKQTLEAERGTYVPRRYRVGI*
Ga0075125_101076382	3300005935	Saline Lake	VSVSYVMANTVGEKELKTDWDELTASDSTKAVGHKQTLVPENSIVPKRYKAGIE*
Ga0075125_101373192	3300005935	Saline Lake	MANTAGEKELKTDWDELTASDSTKKVGHEQTLKAERGTFVPKRNRVGI*
Ga0075125_102599932	3300005935	Saline Lake	MANTAGEKELKTDWDELTASDSTKAVGHEQTLVAEKGTFVPKRNRVGIE*
Ga0075125_103262483	3300005935	Saline Lake	MANTVGEKELKTDWDELTASDSTKKVGHKQTLVAEQGTFVPRRYRAGIDGTN*
Ga0098068_100137110	3300006733	Marine	MAENTIGEKELRTDWDELTASDSTKDVGHEQTLVAEEGSLVPQRKKVGLQ*
Ga0098068_10051415	3300006733	Marine	MTNTKGEKELKTDWDELTASDSTKAVGHEQTLVAEEGTFVPRRNRVGI*
Ga0098068_10294302	3300006733	Marine	MANNTIGEKELRTDWDELTASDSTKYVGHEQSLVPTEGSLVNRNWKKGL*
Ga0075464_110962732	3300006805	Aqueous	MANTIGEKELKTSWDELTASDETKRVGHEQTLKAEEGSLVSRRDKIGF*
Ga0100403_11085852	3300008255	Aquifer	MANTKGEKELRTSWDEQTASDSTKFIGHIKNLIPEKSFVPQRKKAGLD*
Ga0114880_10771462	3300008450	Freshwater Lake	MANTIGEKELKTDWDELTASDSTKAVGHEQTLKPEKCFVPERNRAGIY*
Ga0114918_103554531	3300009149	Deep Subsurface	KELKTDWDELTASDSTKAVGHEQTLRPTEGTFVPKRNRVGI*
Ga0114918_104175212	3300009149	Deep Subsurface	MANTAGEKELKTSWDELTASDSTKAVGHIKNLIPEKSLVPQRNKVGL*
Ga0114918_107340171	3300009149	Deep Subsurface	MANTIGEKELRTDWDELTDSDSTKAVGHEQTLRATEGTFVPRRNRVGID*
Ga0103680_102239051	3300009285	Groundwater	MANTIGEKELKTSWDELTASDSTKAIGHRRTLKATQGSN
Ga0127405_11515632	3300009480	Meromictic Pond	MAGVNAGTIGTKEIRTDWDELTTSDSTKAVGHEQTLVAEQGTFVPRRYRKGI*
Ga0116182_12804892	3300009666	Anaerobic Digestor Sludge	MANTIGEKELKTSWDSLTASDETKRVGHETTLKAEEGSLVSRRDKIGF*
Ga0116148_11195061	3300009669	Anaerobic Digestor Sludge	MANTIGEKELKTSWDELTASDETKRVGHETTLKAEEGSLVSRRDKIGF*
Ga0116148_11945931	3300009669	Anaerobic Digestor Sludge	MANTIGEKELKTSWDELTASDETKRVGHETTLKAEEGSLV
Ga0116185_13029054	3300009673	Anaerobic Digestor Sludge	MANTIGEKELKTSWDSLTASDETKRVGHEQTLKAEEGTIVSRRDSVGI*
Ga0116187_11746262	3300009676	Anaerobic Digestor Sludge	MANTIGEKELKTSWDSLTASDETKRVGHEQTLRAEEGTIVSRRDSVGI*
Ga0116159_10683668	3300009720	Anaerobic Digestor Sludge	QMANTIGEKELKTSWDSLTASDETKRVGHEQTLKAEEGTIVSRRDSVGI*
Ga0136651_100832732	3300010330	Marine Hydrothermal Vent	MANTIGEKELKESWDELTASDPTKAVGHEQSLVPTDETFVRQRYRVGID*
Ga0116252_103025863	3300010342	Anaerobic Digestor Sludge	MANTIGEKELKTSWDSLTASDETKRVGHEQTLRAEEGTIVSRR
Ga0116249_115872152	3300010357	Anaerobic Digestor Sludge	MANTIGEKELKTSWDELTASDETKRVGHETTLKAEEGSLVSRRDSVGI*
Ga0163203_10647251	3300013089	Freshwater	MANRIGDKELKTDWDELTASDSTKAVGHAQTLEPQTSFISNKKKVGI*
Ga0164320_106724302	3300013098	Marine Sediment	MANTIREKELKTEWDELTASDPTKFIGHEQTLVAEEGTFVPRRERIGID*
(restricted) Ga0172374_11378551	3300013122	Freshwater	KELKTSWDDLTASDSTKSVGHKQTLEYEKSLVPARYKKGL*
(restricted) Ga0172374_12317192	3300013122	Freshwater	MGNTIKEKELKTSWDELTASDSTKAVGHIKNLIPEEASYVPEREQAGLY*
(restricted) Ga0172367_102462983	3300013126	Freshwater	MANIIKEKELKASWDSLTASDPTKAIGHKQTLEPEIQSNVS
(restricted) Ga0172366_106874133	3300013128	Sediment	MANTIGEKELKTDWDELTASDSTKFIGHEQTLVPEEASLVLARDKL*
(restricted) Ga0172366_109227001	3300013128	Sediment	MANTIKEKELKTSWDELTASDSTKAVGHIKNLIPEEASFVPEREQAGLY*
(restricted) Ga0172364_103745902	3300013129	Sediment	IGTKELKTSWDELTASDSTKAIGHEQTLKAEEGSLVPSRYRI*
(restricted) Ga0172364_103962352	3300013129	Sediment	MANTTKEKELKTSWDALTASDSTKAVGHEQNLVAEQGSLVPARKKRGL*
(restricted) Ga0172364_109133853	3300013129	Sediment	SNNPMANTIGEKELKTSWDELTASDETKFIGHEQTLVPEKSLIPERRKKGL*
(restricted) Ga0172363_104969452	3300013130	Sediment	MANTLREKELKTSWDELTASDSTKAVGHEQTLKPTDGTFVPARKRKGL*
(restricted) Ga0172363_107852331	3300013130	Sediment	MANTLKEKELRTSWDELTASDETKAVGHEQTLIAEEGT
(restricted) Ga0172362_102696042	3300013133	Sediment	MANTIKEKELKTSWDALTASDSTKAVGHEQNLVAEQGSLVPARKKRGL*
(restricted) Ga0172362_106330422	3300013133	Sediment	MGNTIKEKELKTSWDALTASDSTKPFGHIQNLIPEEKSFIPKRECVGL*
(restricted) Ga0172362_107678002	3300013133	Sediment	MANTLKEKELKTSWDELTASDSTKAIGHKQQLEAEKGSFVPVRKRKGL*
(restricted) Ga0172362_108859231	3300013133	Sediment	MANTIKEKELKTSWDELTTSDSTKAVGHVKNLIPEEASFVPEREQVGL*
(restricted) Ga0172362_109733781	3300013133	Sediment	MANTIGEKELKTSWDELTASDETKRVGHEQTLRAEEGS
(restricted) Ga0172362_109930022	3300013133	Sediment	MANTLKEKELKTDWDELTASDSTKAIGHEKNLIAEEGSLVPVRKKAGL*
(restricted) Ga0172375_102231643	3300013137	Freshwater	MANTIKEKELKESWDATTASDATKKVGHVKNLIPTEKSFVPERKLKGIR*
(restricted) Ga0172375_105572422	3300013137	Freshwater	MANTIKEKELKTSWDELTASDSTKAVGHVKNLIPEEASFVPEREQVGLY*
Ga0172381_100288677	3300014204	Landfill Leachate	MANTKGEKELKTSYDELVVLDPTKYIGHEQNLVPEKSFVPARYKVGMD*
Ga0172381_101299981	3300014204	Landfill Leachate	MANTFGEKELKTSWDSLTASDSTKAVGHEQTLVAEEGSFIPEKDRVG
Ga0172381_102425844	3300014204	Landfill Leachate	MANTCGEKELKTDWDEQTANDSSKAIGHVKNLVAEKSFVPARYKVGLN*
Ga0172381_105075082	3300014204	Landfill Leachate	MANTAGEKELRTDWDELTASDSTKAVGHIKNLVPEKSFVPQRNMVGLD*
Ga0172381_107904001	3300014204	Landfill Leachate	MADTIKQAELKTSYDALKQSDPTKAVGHIKNLIPTEGSCVNPKQKTGFT*
Ga0172381_108390533	3300014204	Landfill Leachate	MANTFKEKELKTNWDELTALDPTKAVGHEQTLVPEVSLVSSRDNAGV*
Ga0172381_111207363	3300014204	Landfill Leachate	MANTIGEKELKTDWDELTASDSSKAIGHVKNLIPEKSFVPARYKAGIDC*
Ga0172380_108185173	3300014205	Landfill Leachate	FIMANTVGEKELKTSWDELTASDSTKAIGHAQTLVPEKSFTPSRDDVGI*
Ga0180007_100295232	3300014656	Groundwater	MAGVNAGTRGTKEIRTSYDELTASDSTKAVGHKQTLEPTEGSLVPRRRKIGV*
Ga0180007_101068243	3300014656	Groundwater	MANTSGEKELKTDWDEQTASDSTKAVGHEQNLVAVEGSIVPKRYKVGL*
Ga0180007_103040852	3300014656	Groundwater	MANTIGEKELKTDWDELTASDSTKAVGHKQQLEAEEGSLVPRREKVGL*
Ga0180007_103712982	3300014656	Groundwater	MANTTGEKELRTDWDELTASDSNKAVGHKQNLEAEQGSLVPRREKIGLQ*
Ga0180007_104379432	3300014656	Groundwater	MANTFGEKELRTDWGELTASDSTKAVGHTQTLVAEESFVPTRNKVGI*
Ga0180007_105802511	3300014656	Groundwater	MANTSGEKELKTDWDEQTASDSTKAVGHEQNLVATEGSLVPKRYKVGL*
Ga0180007_106910232	3300014656	Groundwater	MAGVNAGTRGTKEIRTSYDELTASDSTKAVGHKQTLEPTEGSLVPRRQKIGV*
Ga0180431_105039782	3300017987	Hypersaline Lake Sediment	MAGVNAGTKGTKEIKTSYDELTASDETKAVGHEQTLVAEEGSLVPRRQKVGV
Ga0194113_103080112	3300020074	Freshwater Lake	MANTLKEKELKTSWDALTASDSTKAVGHEQTLVAEEGTFVPERKRKGL
Ga0194111_101976542	3300020083	Freshwater Lake	MANTIREKELRTDWDELTASDSTKAVGHEQTLVAEEGSFVPARKRKGL
Ga0194111_108247242	3300020083	Freshwater Lake	MANTLKEKELKTSWDALTASDSTKAVGHKQQLEAEEGTFIPERKRKGL
Ga0212118_101010442	3300022552	Marine Hydrothermal Vent	MANTIGEKELKESWDELTASDPTKAVGHEQSLVPTDETFVRQRYRVGID
Ga0222673_10066184	3300022821	Saline Water	MANTVGEKELKTDWDELTASDSTKREGHKQTLEAERGTYVPRRYRVGI
Ga0222667_10302941	3300022890	Saline Water	LKTDWDELTASDSTKREGHKQTLEAERGTYVPRRYRVGI
(restricted) Ga0233423_104467141	3300023177	Freshwater	MANTIREKELKTDWDSLTASDSTKAVGHVENLIPTEDSLIPEREKKGL
(restricted) Ga0233412_1000185210	3300023210	Seawater	MASTSGEKELRTSWDELTASDSTKRVGHKQSLEAEQGSLIRRQRRIGIDGR
(restricted) Ga0233412_100292853	3300023210	Seawater	MANTKGEKELRTSWDELTASDSTKKFGHKQSLEAEQGSLIRRQERTGIDGR
Ga0222682_10072763	3300023246	Saline Water	MANTVGEKELKTDWDELTASDSTKAVGHKQTLEAENSIVPQRYKAGI
(restricted) Ga0233437_12468711	3300024259	Seawater	MASTSGEKELRTSWDELTASDSTKKFGHKQSLEAEQGSLIRRQERTGI
Ga0210003_13789981	3300024262	Deep Subsurface	MANTIGEKELKTDWDELTASDSTKAVGHEQTLIPEKSFVPARYKVGLD
Ga0210043_10858211	3300025018	Aquifer	KELRTSWDEQTASDSTKFIGHIKNLIPEKSFVPQRKKAGLD
Ga0208670_10038611	3300025038	Marine	MAENTIGEKELRTDWDELTASDSTKDVGHEQTLVAEEGSLVPQRKKVGLQ
Ga0208015_10161842	3300025065	Marine	NSMTNTKGEKELKTDWDELTASDSTKAVGHEQTLVAEEGTFVPRRNRVGI
Ga0208197_12256452	3300025720	Anaerobic Digestor Sludge	MANTIGEKELKTSWDSLTASDETKRVGHEQTLKAEEGTIVSRRDSVGI
Ga0208196_12561572	3300025724	Anaerobic Digestor Sludge	MANTIGEKELKTSWDSLTASDETKRVGHEQTLKAEEGTIVS
Ga0207997_10903732	3300025736	Saline Lake	MANTAGEKELKTDWDELTASDSTKKVGHEQTLKAERGTFVPKRNRVGI
Ga0208916_102406624	3300025896	Aqueous	MANTIGEKELKTSWDSLTTSDETKRVGHEQTLKAEEGSLVSRRDKIGF
Ga0214474_12761723	3300027740	Soil	MANTIKEKELKTSWDELTASDSTKAVGHLKNLMPEEKSFISVEK
(restricted) Ga0233415_100177112	3300027861	Seawater	MAGVNAGTRGTKELKGDYDELTVSDSTKAVGHVQTLEPETSLVPKRLKVGM
(restricted) Ga0233415_102917412	3300027861	Seawater	MANTVGEKELKTDWDEQTASDSTKAVGHEQTLVAEEGTYVPERYRVGI
(restricted) Ga0233418_100313654	3300027995	Sediment	MANIYKEKELKTSWDELTASDSTKAIGHKQTLVPLEGSLYPRRKKAGIE
(restricted) Ga0233413_102192922	3300027996	Seawater	MAGVNAGTRGTKELKGDYDELTVSDSTKAVGHVQTLEPETSLVPKRLKVGI
Ga0268282_11341162	3300028276	Saline Water	MANTIGEKELKTDWDELTASDPTKAVGHEKTLVATEGTFVPRRYRAGID
Ga0268280_10093082	3300028298	Saline Water	MANTIGEKELKTNWDSLTASDPTKAVGHVQTLEPIEKSLCESRYDAGI
Ga0268280_10592521	3300028298	Saline Water	MANTKGEKELKTSWDELTSSDSTKAVGHETSLKAEQSFVPARYKVGLXLIG
(restricted) Ga0255344_11912163	3300028564	Wastewater	MANTIGEKELKTSWDELTASDETKRVGHEQTLKAEEGSLVSRRDKIGF
(restricted) Ga0247840_103756662	3300028581	Freshwater	MANTIKEKELKTSWDELTASDSTKYVGHVQTLEPETSLIPNRESVGI
(restricted) Ga0255347_13588652	3300028593	Wastewater	MANTIGEKELKTSWDELTASDETKRVGHEQTLKAEEGSLVSRRD
(restricted) Ga0247842_1001087210	3300029268	Freshwater	VITMANTSGEKELKTSWDELTASDSTKAVGHTQNLVPQQSFVSKRNRAGL
(restricted) Ga0247842_101947304	3300029268	Freshwater	MANTKGEKELKTDWDELTASDSTKAVGHEQTLEPTDKSLCEERYNVGI
Ga0265297_100135484	3300029288	Landfill Leachate	MANTIGEKELKTSWDELTASDSTKAVGHAQTLVPEKSFTPARDDVGI
Ga0265297_100478119	3300029288	Landfill Leachate	MANTVGEKELKTSWDELTASDSTKAVGHIQNLVPEKSFTPARDDVGI
Ga0265297_103497054	3300029288	Landfill Leachate	MANTAGEKELRTDWDELTASDSTKAVGHIKNLVPEKSFVPQRNMVGLD
Ga0307928_100039968	3300031227	Saline Water	MANTIGEKELKTDWDELTASDSTKAVGHEQTLVPENSIVPQRYKVGI
Ga0307928_100355752	3300031227	Saline Water	MGNNAGTIRTKELKGSYDELTASDSTKAVGHEQTLVATEGSFVPRRLRAGI
Ga0307928_100546772	3300031227	Saline Water	MGNNAGTIRTKELKGSYDKLTASDSTKAVGHEQTLVAEQGSFVPRRLRAGI
Ga0307928_100688683	3300031227	Saline Water	MANTAGEKELKTDWDELTASDSTKAVGHEQTLVAEKGTFVPKRNRVGIE
Ga0307928_101798542	3300031227	Saline Water	MANTAGEKELKTDWDELTASDSTKAVGHEQTLVAEEGTYVPKRYRVGI
Ga0307928_101991404	3300031227	Saline Water	MANTVGEKELKTDWDELTASDSTKAVGHKQTLVAERGTYVPRRYRVGI
Ga0307928_103483051	3300031227	Saline Water	MANTVGEKELKTDWDELTASDSTKKVGHKQTLVAEQGTFVPRRYRAGIDGTN
Ga0307928_104268541	3300031227	Saline Water	MANTIGEKEIKTDWDELTASDSTKAIGHEQTLVAEQGSLVPRRKKVGLDG
Ga0307928_104792193	3300031227	Saline Water	MANTVGEKELKTDWDELTASDSTKAVGHKQTLVPENSIVPKRYKAGIE
Ga0307928_104909592	3300031227	Saline Water	MANTVGEKELKTEWDELTASDSTKKEGHKQTLEAEQGTFVPRRYRVGI
Ga0307427_10601792	3300031351	Salt Marsh	MANTAGEKELKTSWDELTASDSTKAVGHVKNLIPKKSLVPQRKKVGL
Ga0307429_11866621	3300031368	Salt Marsh	PYNSMANTAGEKELKTSWDELTASDSTKAVGHIKNLIPEKSLVPKRYKAGL
Ga0307434_10525993	3300031379	Salt Marsh	MANTAGEKELKTSWDELTASDSTKAVGHIKNLIPEKSLVPKRYKAGL
Ga0315291_113395712	3300031707	Sediment	MANTHGEKELKTDWDALTASDSTKAVGHTKNLIPEESHVSEKDKVGC
Ga0315291_113463502	3300031707	Sediment	MANTLKEKELKTSWDALTASDSTKAVGHIKNLIAEEGSNVSKRERQGID
Ga0315288_100112694	3300031772	Sediment	MANIAGEKELKTDWDELSASDSTKAVGHEQNLVPEETFIPQRYRAGI
Ga0315288_107066482	3300031772	Sediment	MANTVGEKELKTDWDELTASDSSKAIGHEQNLVPEETFIPQRYRAGI
Ga0315294_104950351	3300031952	Sediment	MANTLKEKELKTSWDALTASDSTKAVGHIKNLIAEEGSNV
Ga0315278_116726651	3300031997	Sediment	MANKVGEKELKTDWDALTASDSTKAVGHAKALVPERSYVPARYRVGMD
Ga0315274_114049724	3300031999	Sediment	MANTLKEKELKTSWDALTASDSTKAVGHIKNLIAEEGSNVPKRE
Ga0315284_102425333	3300032053	Sediment	MANTIKEKELKTDWDATTAADSTKAIGHVKNLIAEEGSNVSRRERQGID
Ga0315284_110971983	3300032053	Sediment	MANTIKEKELKTSWDALTASDSTKAVGHIKNLIAEEGSNVPKRERQGID
Ga0315277_107165852	3300032118	Sediment	MANTIKEKELKTSWDATTATDSTKAIGHLKNLMPEEKSFITAEKRKGID
Ga0315295_112357613	3300032156	Sediment	MANTIKEKELKTDWDATTAADSTKAIGHIKNLIAEGGSNVSRRERQGID
Ga0315283_108353213	3300032164	Sediment	MANTLKEKELKTSWDALTASDSTKAVGHIKNLIAEEGSNVPKRERQGID
Ga0315276_120500153	3300032177	Sediment	MANTLKEKELKTSWDALTASNSTKAVGHIKNLIAEEGSNVSKRERQGID
Ga0315275_104601592	3300032401	Sediment	MANTIKEKELKTDWDELTASDSTKAVGHIKNLIPEKSLVSQEKRKGLDY
Ga0315273_1001140721	3300032516	Sediment	MANTLKEKELKTDWDATTAADSTKAFGHVQNLIPTEKSFIPERKRKGID
Ga0315273_109555322	3300032516	Sediment	MANTHGEKELRTDWDELTASDSTKAIGHVKNLIYEKTFVPAKDKVGLN
Ga0315273_117718072	3300032516	Sediment	MANTLKEKELKTSWDATTAADSTKAVGHIKNLIAEEGSNVSKRKRQGID
Ga0214472_106245202	3300033407	Soil	MANTHGEKELRNDYDALTASDSTKAIGHKQSLVPLEGSLVNRNWKKGL
Ga0299912_108003772	3300033489	Soil	MANTIKEKELKTSWDELTASDSTKAVGHLKNLMPEEKSFISVEKRKGID
Ga0310130_0155898_54_200	3300034073	Fracking Water	MANTIREKELKTSWDELTASDSTKAVGHQQSLVAEKSFISQEQLKGIR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters