Metagenome / Metatranscriptome Family F056731

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056731
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	55 residues
Representative Sequence	MLVDKIIIERHPSKIDKDGRRHYLIRAIPYQDPQQEAERLKAVHEARVKIVPRV
Number of Associated Samples	100
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	28.36 %
% of genes near scaffold ends (potentially truncated)	48.91 %
% of genes from short scaffolds (< 2000 bps)	83.21 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.745 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (36.496 % of family members)
Environment Ontology (ENVO)	Unclassified (41.606 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.066 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.29% β-sheet: 26.83% Coil/Unstructured: 54.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF07366	SnoaL	3.65
PF11746	DUF3303	2.92
PF00561	Abhydrolase_1	2.92
PF12708	Pectate_lyase_3	2.19
PF00106	adh_short	1.46
PF02627	CMD	1.46
PF00501	AMP-binding	1.46
PF13474	SnoaL_3	1.46
PF12680	SnoaL_2	1.46
PF12728	HTH_17	1.46
PF03780	Asp23	1.46
PF03807	F420_oxidored	1.46
PF13408	Zn_ribbon_recom	0.73
PF00994	MoCF_biosynth	0.73
PF05239	PRC	0.73
PF12158	DUF3592	0.73
PF01035	DNA_binding_1	0.73
PF13845	Septum_form	0.73
PF01326	PPDK_N	0.73
PF13701	DDE_Tnp_1_4	0.73
PF02195	ParBc	0.73
PF00589	Phage_integrase	0.73
PF01565	FAD_binding_4	0.73
PF00144	Beta-lactamase	0.73
PF13551	HTH_29	0.73
PF12900	Pyridox_ox_2	0.73
PF01872	RibD_C	0.73
PF07883	Cupin_2	0.73
PF08240	ADH_N	0.73
PF07508	Recombinase	0.73
PF10709	DUF2511	0.73
PF05103	DivIVA	0.73
PF09948	DUF2182	0.73
PF01545	Cation_efflux	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.46
COG1302	Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family	Function unknown [S]	1.46
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.46
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.73
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.73
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.73
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	0.73
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.73
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.73
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.73
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.73
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.73
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.73
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.74 %
All Organisms	root	All Organisms	45.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.74 %
cellular organisms	root	All Organisms → cellular organisms	43.80 %
Viruses	superkingdom	All Organisms → Viruses	1.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	39.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.23 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.46 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.46 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.74 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	5.84 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	5.11 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	2.19 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.73 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.74 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2.19 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.46 %
Promicromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	1.46 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	1.46 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.73 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.73 %
Dermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermatophilaceae	0.73 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.73 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.74 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	1.46 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1.46 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.46 %
Humibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus	0.73 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.73 %
Isoptericola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Isoptericola	0.73 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.73 %
Salinispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora	0.73 %
Kineosphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermatophilaceae → Kineosphaera	0.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.73 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.74 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1.46 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.46 %
Humibacillus xanthopallidus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → Humibacillus xanthopallidus	0.73 %
Friedmanniella luteola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	0.73 %
Microlunatus parietis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus parietis	0.73 %
Microlunatus panaciterrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus panaciterrae	0.73 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.73 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.73 %
Isoptericola halotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Isoptericola → Isoptericola halotolerans	0.73 %
Kineosphaera limosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermatophilaceae → Kineosphaera → Kineosphaera limosa	0.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.73 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.74 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1.46 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.46 %
Kineosphaera limosa NBRC 100340	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermatophilaceae → Kineosphaera → Kineosphaera limosa → Kineosphaera limosa NBRC 100340	0.73 %
Nocardioides sp. Soil774	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Soil774	0.73 %
Humibacillus xanthopallidus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → Humibacillus xanthopallidus	0.73 %
Friedmanniella luteola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	0.73 %
Microlunatus parietis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus parietis	0.73 %
Microlunatus panaciterrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus panaciterrae	0.73 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.73 %
Isoptericola halotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Isoptericola → Isoptericola halotolerans	0.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.73 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT01BH3YG	Not Available	676	Open in IMG/M
3300000891\|JGI10214J12806_11297043	Not Available	756	Open in IMG/M
3300000956\|JGI10216J12902_107038636	Not Available	591	Open in IMG/M
3300002568\|C688J35102_120871227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1927	Open in IMG/M
3300003319\|soilL2_10111836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1893	Open in IMG/M
3300003324\|soilH2_10416801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1450	Open in IMG/M
3300004114\|Ga0062593_100759006	Not Available	957	Open in IMG/M
3300005093\|Ga0062594_102213714	Not Available	595	Open in IMG/M
3300005168\|Ga0066809_10009072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1831	Open in IMG/M
3300005168\|Ga0066809_10012156	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300005168\|Ga0066809_10072619	Not Available	804	Open in IMG/M
3300005338\|Ga0068868_101686126	Not Available	597	Open in IMG/M
3300005539\|Ga0068853_102115730	Not Available	546	Open in IMG/M
3300005937\|Ga0081455_10058376	All Organisms → cellular organisms → Bacteria	3265	Open in IMG/M
3300006049\|Ga0075417_10491176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	616	Open in IMG/M
3300006058\|Ga0075432_10044307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1560	Open in IMG/M
3300006058\|Ga0075432_10602545	Not Available	503	Open in IMG/M
3300006194\|Ga0075427_10058462	Not Available	672	Open in IMG/M
3300006196\|Ga0075422_10002766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5280	Open in IMG/M
3300006844\|Ga0075428_100247363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1922	Open in IMG/M
3300006845\|Ga0075421_100002560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21735	Open in IMG/M
3300006845\|Ga0075421_101217561	Not Available	839	Open in IMG/M
3300006852\|Ga0075433_10483345	Not Available	1091	Open in IMG/M
3300009094\|Ga0111539_11604483	Not Available	755	Open in IMG/M
3300009094\|Ga0111539_12651617	Not Available	581	Open in IMG/M
3300009094\|Ga0111539_12892393	Not Available	556	Open in IMG/M
3300009100\|Ga0075418_11368226	Not Available	768	Open in IMG/M
3300009147\|Ga0114129_11563248	Not Available	809	Open in IMG/M
3300009148\|Ga0105243_10117222	Not Available	2238	Open in IMG/M
3300009148\|Ga0105243_12421478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300009156\|Ga0111538_10291733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2064	Open in IMG/M
3300009551\|Ga0105238_10203493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1956	Open in IMG/M
3300009553\|Ga0105249_10140958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2312	Open in IMG/M
3300009840\|Ga0126313_10927260	Not Available	711	Open in IMG/M
3300010036\|Ga0126305_10276808	Not Available	1085	Open in IMG/M
3300010038\|Ga0126315_10074624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1897	Open in IMG/M
3300010038\|Ga0126315_10370452	Not Available	895	Open in IMG/M
3300010038\|Ga0126315_10838376	Not Available	608	Open in IMG/M
3300010040\|Ga0126308_10158560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1434	Open in IMG/M
3300010041\|Ga0126312_10973565	Not Available	620	Open in IMG/M
3300010042\|Ga0126314_10192572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	1434	Open in IMG/M
3300010042\|Ga0126314_10301424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1144	Open in IMG/M
3300010044\|Ga0126310_10501360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	887	Open in IMG/M
3300010045\|Ga0126311_10103168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1961	Open in IMG/M
3300010045\|Ga0126311_11760174	Not Available	524	Open in IMG/M
3300010999\|Ga0138505_100008044	Not Available	1162	Open in IMG/M
3300012469\|Ga0150984_100007108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1950	Open in IMG/M
3300012469\|Ga0150984_112683506	All Organisms → cellular organisms → Bacteria → Terrabacteria group	763	Open in IMG/M
3300012900\|Ga0157292_10105222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	847	Open in IMG/M
3300012901\|Ga0157288_10163583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	677	Open in IMG/M
3300012907\|Ga0157283_10090889	Not Available	798	Open in IMG/M
3300012910\|Ga0157308_10085269	Not Available	902	Open in IMG/M
3300012910\|Ga0157308_10340649	Not Available	563	Open in IMG/M
3300012911\|Ga0157301_10140564	Not Available	757	Open in IMG/M
3300012937\|Ga0162653_100003440	Not Available	1559	Open in IMG/M
3300012939\|Ga0162650_100006077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1437	Open in IMG/M
3300012941\|Ga0162652_100077999	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300013096\|Ga0157307_1045171	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300014121\|Ga0181457_12490	Not Available	729	Open in IMG/M
3300014497\|Ga0182008_10130032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	1255	Open in IMG/M
3300015077\|Ga0173483_10625038	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300015077\|Ga0173483_10834418	Not Available	536	Open in IMG/M
3300015371\|Ga0132258_11105051	Not Available	2004	Open in IMG/M
3300015371\|Ga0132258_11492953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1707	Open in IMG/M
3300015371\|Ga0132258_12563661	Not Available	1274	Open in IMG/M
3300015372\|Ga0132256_100181430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	2140	Open in IMG/M
3300015373\|Ga0132257_101313048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	919	Open in IMG/M
3300015374\|Ga0132255_104594152	Not Available	585	Open in IMG/M
3300018028\|Ga0184608_10018908	Not Available	2475	Open in IMG/M
3300018054\|Ga0184621_10030281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1725	Open in IMG/M
3300018054\|Ga0184621_10137320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	878	Open in IMG/M
3300018061\|Ga0184619_10267439	Not Available	785	Open in IMG/M
3300018067\|Ga0184611_1241886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M
3300018072\|Ga0184635_10306855	Not Available	620	Open in IMG/M
3300018074\|Ga0184640_10004873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4463	Open in IMG/M
3300018466\|Ga0190268_10276355	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300018466\|Ga0190268_11240536	Not Available	622	Open in IMG/M
3300018469\|Ga0190270_10805886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	946	Open in IMG/M
3300018469\|Ga0190270_12075582	Not Available	627	Open in IMG/M
3300018469\|Ga0190270_12608403	Not Available	568	Open in IMG/M
3300018469\|Ga0190270_13250185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Isoptericola → Isoptericola halotolerans	515	Open in IMG/M
3300018481\|Ga0190271_10093997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2737	Open in IMG/M
3300018481\|Ga0190271_10140829	Not Available	2310	Open in IMG/M
3300018481\|Ga0190271_11583028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	771	Open in IMG/M
3300018481\|Ga0190271_13451338	Not Available	529	Open in IMG/M
3300019279\|Ga0184642_1039494	Not Available	581	Open in IMG/M
3300019767\|Ga0190267_11189016	Not Available	557	Open in IMG/M
3300019867\|Ga0193704_1001222	Not Available	4972	Open in IMG/M
3300019869\|Ga0193705_1008839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2200	Open in IMG/M
3300020016\|Ga0193696_1053411	Not Available	1063	Open in IMG/M
3300021510\|Ga0222621_1136694	Not Available	522	Open in IMG/M
3300021951\|Ga0222624_1396820	Not Available	535	Open in IMG/M
3300022756\|Ga0222622_10269936	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1160	Open in IMG/M
3300022756\|Ga0222622_11169368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Soil774	566	Open in IMG/M
3300023266\|Ga0247789_1091460	Not Available	598	Open in IMG/M
3300025904\|Ga0207647_10778492	Not Available	516	Open in IMG/M
3300025919\|Ga0207657_10917773	Not Available	674	Open in IMG/M
3300025924\|Ga0207694_10228168	Not Available	1520	Open in IMG/M
3300027909\|Ga0209382_10578961	Not Available	1225	Open in IMG/M
3300028708\|Ga0307295_10114068	Not Available	735	Open in IMG/M
3300028713\|Ga0307303_10146979	Not Available	564	Open in IMG/M
3300028778\|Ga0307288_10104288	All Organisms → Viruses → Predicted Viral	1036	Open in IMG/M
3300028778\|Ga0307288_10129302	Not Available	939	Open in IMG/M
3300028782\|Ga0307306_10008309	Not Available	2192	Open in IMG/M
3300028784\|Ga0307282_10037414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2126	Open in IMG/M
3300028784\|Ga0307282_10043151	Not Available	1993	Open in IMG/M
3300028784\|Ga0307282_10190097	Not Available	980	Open in IMG/M
3300028787\|Ga0307323_10099773	Not Available	1041	Open in IMG/M
3300028787\|Ga0307323_10224932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	677	Open in IMG/M
3300028787\|Ga0307323_10301897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	575	Open in IMG/M
3300028791\|Ga0307290_10007271	Not Available	3677	Open in IMG/M
3300028810\|Ga0307294_10156393	Not Available	763	Open in IMG/M
3300028811\|Ga0307292_10252154	Not Available	733	Open in IMG/M
3300028814\|Ga0307302_10011990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3888	Open in IMG/M
3300028814\|Ga0307302_10293588	Not Available	799	Open in IMG/M
3300028819\|Ga0307296_10601200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300028828\|Ga0307312_10062271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus parietis	2252	Open in IMG/M
3300028828\|Ga0307312_10436124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermatophilaceae → Kineosphaera → Kineosphaera limosa → Kineosphaera limosa NBRC 100340	862	Open in IMG/M
3300028828\|Ga0307312_10845702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300028875\|Ga0307289_10060184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1526	Open in IMG/M
3300028878\|Ga0307278_10022018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2942	Open in IMG/M
3300028878\|Ga0307278_10152106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1036	Open in IMG/M
3300028878\|Ga0307278_10154699	Not Available	1026	Open in IMG/M
3300031421\|Ga0308194_10192689	Not Available	655	Open in IMG/M
3300031731\|Ga0307405_10322666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1180	Open in IMG/M
3300031852\|Ga0307410_12133746	Not Available	501	Open in IMG/M
3300031911\|Ga0307412_10812676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus panaciterrae	812	Open in IMG/M
3300032004\|Ga0307414_11246330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	689	Open in IMG/M
3300032004\|Ga0307414_11479517	Not Available	632	Open in IMG/M
3300032174\|Ga0307470_11174311	Not Available	622	Open in IMG/M
3300032180\|Ga0307471_102640654	Not Available	637	Open in IMG/M
3300032205\|Ga0307472_100175531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → Humibacillus xanthopallidus	1599	Open in IMG/M
3300033550\|Ga0247829_11190054	Not Available	632	Open in IMG/M
3300034417\|Ga0364941_030322	All Organisms → Viruses → Predicted Viral	1147	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.61%
Host-Associated	Host-Associated	29.93%
Engineered	Engineered	1.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.85%
Plants	Host-Associated → Plants	29.93%
Aquatic	Environmental → Aquatic	8.76%
Solid Waste	Engineered → Solid Waste	0.73%
Built Environment	Engineered → Built Environment	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.63%
Sediment	Environmental → Aquatic → Sediment	7.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.30%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.92%
Freshwater	Environmental → Aquatic → Freshwater	1.46%
Floodplain	Environmental → Terrestrial → Floodplain	0.73%
Grass	Engineered → Solid Waste → Grass	0.73%
Unclassified	Engineered → Built Environment → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.65%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.46%
Loam	Environmental → Terrestrial → Soil → Loam	0.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.73%
Composting	Engineered → Solid Waste → Grass → Composting	0.73%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.30%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.65%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.19%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.73%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.73%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.73%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	36.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.68%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.11%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.65%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.19%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.19%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.46%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.73%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.73%
Clean Room	Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Clean Room	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014121	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In4 SAF170 SPAdes reassembly	Engineered	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_00062520	2170459016	Switchgrass, Maize And Mischanthus Litter	IGARTEMLVDKIIIAPHPHKIDEEGRRHYLIRASPYQDPLREAERLTAVHEARVKIVPRV
JGI10214J12806_112970432	3300000891	Soil	MEMLVDKIIIERHPSKIDTDGRRHYIIRAIPYQDPQQEAERLKAVHEARVKIVSRV*
JGI10216J12902_1070386361	3300000956	Soil	RRQPRRERCSRSTGLTEMLVDKIVIAPHPHKIVEERRHYTIRAIPYQDPDLEAERLKAVHEARVKIVPRV*
C688J35102_1208712272	3300002568	Soil	MLVDKIVIAPHPHKIDRDGRRHYLIRAIPYQDPQQEAERLKAVHGARVKIVPRV*
soilL2_101118362	3300003319	Sugarcane Root And Bulk Soil	LRLAGATDRRTPQPQKIDENGKRHYLIRAIPYQDSQQEAERLKAVHEARVKIVPRV*
soilH2_104168013	3300003324	Sugarcane Root And Bulk Soil	LCLAGATDRRTPQPQKIDENGKRHYLIRAIPYQDSQQEAERLKAVHEARVKIVPRV*
Ga0062593_1007590061	3300004114	Soil	MLLDKIVIALHRHKIDKAGRRHYTVRAIRYQDPGQEAERLKAVHEARVR
Ga0062594_1022137142	3300005093	Soil	MLVDKIIIERYPSKIDRDGRRHYFIRVIPYQDPQQDVERLKAVHDGRVKIVPRV
Ga0066809_100090725	3300005168	Soil	KIVIAPHPHKIVDGRRHYLIRAIPYQDPEQEAKRLKAVHEARVKIVPRV*
Ga0066809_100121562	3300005168	Soil	VKIRAAGAGTHKIIIERHPSKIDKDGRRHDLIRAFPYQDAQQEAERLKAVHEARVKIVPRV*
Ga0066809_100726191	3300005168	Soil	DKIVIAPHPHKIVDGRRRYTIRAIPHQDPEMEAERLKAVHEARVKIVPRV*
Ga0068868_1016861261	3300005338	Miscanthus Rhizosphere	MLVDKIIIERYPSKIDKDGRRHYFIRAIPYQDPQQDVERLKAVHDGRVKSVPRV*
Ga0068853_1021157302	3300005539	Corn Rhizosphere	ALTKMLVGKIIIERDPSKIDKDGQRHYLIRAIPYQDPQQEAARLKAVHETRVKIVSRV*
Ga0081455_100583761	3300005937	Tabebuia Heterophylla Rhizosphere	VIIKTNGRKIVIDKIVIAPHPKIDKDGRRHYTIHAIPDQDPQQEAERLKAVHEARVKIVPRV*
Ga0075417_104911762	3300006049	Populus Rhizosphere	IVIAPHPHKIVDGRRHYTIRAIPYQDPEMEAERLKAVHEARVKIVPRV*
Ga0075432_100443072	3300006058	Populus Rhizosphere	DKIIIAPHPHKIVDGKRHYTIRAIPYQDPQQEAERLKAVHQARVKIVARV*
Ga0075432_106025452	3300006058	Populus Rhizosphere	VIAPHPHKIDKDGRRHYTIRAIPYQDPEMEAARLKAVHDARVKIVPRV*
Ga0075427_100584622	3300006194	Populus Rhizosphere	MPLPMDQIVIAPHPHKIDRAGGRYYTIRAIPYLDPEMQTARLKAVHEARVKIIPRA*
Ga0075422_100027668	3300006196	Populus Rhizosphere	ERDPSKIDKDGQRHYLIRAIPYQDPQQEAARLKAVHETRVKIVSRV*
Ga0075428_1002473632	3300006844	Populus Rhizosphere	MPLPMDLIVIAPHPHKIDRAGGRYYTIRAIPYLDPEMQTARLKAVHEARVKIIPRA*
Ga0075421_10000256032	3300006845	Populus Rhizosphere	ITERDPSKIDKDGQRHYLIRAIPYQDPQQEAARLKAVHETRVKIVSRV*
Ga0075421_1012175612	3300006845	Populus Rhizosphere	MLVDKIVIAPHPHKIVDGRRHYTIRAIPYQDPEMEAARLKAVHEARVKIVPRV*
Ga0075433_104833452	3300006852	Populus Rhizosphere	MGSVDQRDERHPSKIDKDGRRHCLLRAIPYQDPQQEAERLKAVHEARVKIVPRA*
Ga0111539_116044831	3300009094	Populus Rhizosphere	MLVDKIIIERYPSKIDKDGRRHYFIRAIPYQDPQQDVERLKAVHDARAKIVPRV*
Ga0111539_126516171	3300009094	Populus Rhizosphere	MTEMMVEKMIIERHPSKIDKDGKRHYLIRAIPYQDPQQEAERLKAVHEARVEIVPRV*
Ga0111539_128923931	3300009094	Populus Rhizosphere	MLVDKIVIERHPSKIDKDGRRHYTIRAIPYQDPEMEAERLKKVHEARVKIVPRV*
Ga0075418_113682262	3300009100	Populus Rhizosphere	MLVDKIVIAPHPHKIDKDGRRHYTIRAIPYQDPEMEAERLKEVQEARAKIVPRV*
Ga0114129_115632482	3300009147	Populus Rhizosphere	MLVDKIVIAPHPHKIDKDGRRHYTIRAIPYQDPEMEAARLKAVHEARVKIVPRV*
Ga0105243_101172222	3300009148	Miscanthus Rhizosphere	MLVDKIIIERYPSKIDRDGRRHYFIRAIPYQDPQQDVERLKAVHDARVKIVPRV*
Ga0105243_124214782	3300009148	Miscanthus Rhizosphere	LVDKIIIARHPSKIGEDGRRHYLIRAIPYQDPEMEAERLKAVHEARVKIVPRV*
Ga0111538_102917334	3300009156	Populus Rhizosphere	PGAVLIGRHPSKIEKDGRRHYLIPAIPYQDPQQEAERLKAVHEARVKIVPRV*
Ga0105238_102034933	3300009551	Corn Rhizosphere	MLVDKIIIERYPSKIDKDGRRHYFIRAIPYQDPQQDVERLKAVHDARVKIVPRV*
Ga0105249_101409581	3300009553	Switchgrass Rhizosphere	MIIKTDGRTTAIDKIIIHRHPHKIVDGRRRYLIRAIPYQDPQQEAERLKAVHEARVKIIPRA*
Ga0126313_109272602	3300009840	Serpentine Soil	LIGALTEMLVDKIIIERHPSKIDKDGRRHYLVRAIPYQDPQQEAERLKAVHEARVKIVSRV*
Ga0126305_102768081	3300010036	Serpentine Soil	MLVDKIIIAPHPHKIVDGRRHYTIRAIPYQDPQQEAERLEAVHPARVKIVPRV*
Ga0126315_100746241	3300010038	Serpentine Soil	LIGALTEVLVDQIIIERHPSKIDKDGRRHYLIRAIPYQDPQQEAKRLKAVHEARVKIVRRV*
Ga0126315_103704521	3300010038	Serpentine Soil	MLVDKIIIERHPSKIDKDGRRHYLIRAIPYQDPQQEAERLKAVHEARVKIVPRV*
Ga0126315_108383761	3300010038	Serpentine Soil	MLVDKIVIERHPHVMDAAGKRHYTIRAIPYQDPQQEAERLKAVHEARVKIVPRV*
Ga0126308_101585603	3300010040	Serpentine Soil	MLIDKIILEPHPSKIGKDGRRHYLIRAIPYQDPQQEAERLKAVHDARVKIVPRV*
Ga0126312_109735652	3300010041	Serpentine Soil	MLVDKIVIAPHPHKIDQDGRRHYLIRALPYQDPQQEAERLKAVHEARVKIVPRVWPNA*
Ga0126314_101925723	3300010042	Serpentine Soil	LVDKIIIERHPSKIDKDGRRHYLIRAIPYQDPDMEAERLKKVHEARVKIVPRV*
Ga0126314_103014243	3300010042	Serpentine Soil	LIGALTEMLVDKIIIERHPSKIDKDGRRHYLIRAIPYQDPQQEAKRLKAVHEARVKIVRRV*
Ga0126310_105013601	3300010044	Serpentine Soil	TEMLLDKIIIERHPSKIDKDGRRQYLIRAIPYQDPQQEAERLKAVHEARVKIVPRV*
Ga0126311_101031681	3300010045	Serpentine Soil	LIGALTEMLVDKIIIERHSGKIDKDGRRHYLIRAIPYQDPQQEAKRLKAVHEARVKIVPRV*
Ga0126311_117601741	3300010045	Serpentine Soil	LIGALTEMLVDKIIIERHSSKIDNDGRRHYLIRAIPYQDPQQEAERLKAVHEARVKIVPRV*
Ga0138505_1000080442	3300010999	Soil	LIGAPTEKLVDKIIIERHPSKIDEDGRRHYLIRAIPYQDHQLEAERLKAVHETRVKIVPRV*
Ga0150984_1000071081	3300012469	Avena Fatua Rhizosphere	MCPVDQRAERHPSKIDEDGRRHYLIRAIPYQDPQQEAERLKAVHEARVKIIPRV*
Ga0150984_1126835062	3300012469	Avena Fatua Rhizosphere	LVDKIIIERHPSKIDKDGRRHYPIRAIPYQDPEMEAARLKAVHEARVKIVPRV*
Ga0157323_10507531	3300012495	Arabidopsis Rhizosphere	KIDKDGRRTTPSAPSSYQDPQQEAERLKAVHEARVKIVPRV*
Ga0157292_101052223	3300012900	Soil	MRALTEMLVDKIIVHPHPHVIDKDGRRRYTIRAIPYRDDVMEAERLKRVHEARVKIFPRV
Ga0157288_101635831	3300012901	Soil	LTEMLVDKIVIAPHPHKIVEERRHYTIRAIPYQDPDLEAERLKAVHEARVKIVPRV*
Ga0157283_100908891	3300012907	Soil	MLVDKIVISQHPHVMVETPDGKRKRSYTIRAIPYQDPQQEAERLKAVHDARVKIVPRV*
Ga0157308_100852691	3300012910	Soil	MLVDKIIIERHPSKIDKDGRRHYLIRAIPYQDPEMEAERLNAVHEARVKIVPRV*
Ga0157308_103406491	3300012910	Soil	MLLDKIVIALHRHKIDKAGRRHYTVRAIRYQDPGQEAERLKAVHEARVRIVPRV*
Ga0157301_101405641	3300012911	Soil	MEMLVDKIIIERHPSKIDKDGRRHYLIRAIPYQDPEMEAERLNAVHEARVKIVPRV*
Ga0162653_1000034403	3300012937	Soil	VDKIVIAPHPHKIIDGRRHYTIRAIPYQDPEMEAARLKAVHEARVKIVPRV*
Ga0162650_1000060773	3300012939	Soil	EDRRALTEMLVDKIVIAPHPHKIDKDGRRHYLIRAIPYQDPQRAAERLKAVHEARVKIVPRV*
Ga0162652_1000779991	3300012941	Soil	IDKIVITPHPHKIDKDGRRHYLIRAIPYQDPEQEAERLKAVHEARVKIVPRV*
Ga0157307_10451711	3300013096	Soil	YRTRHWRGRTCRQRTGVLMEMLVDKIIIERHPSKIDTDGRRHYIIRAIPYQDPQQEAERLKAVHEARVKIVSRV*
Ga0181457_124901	3300014121	Clean Room	MEILVDKIIIERHPSKIDTDGRRHYIIRAIPYQDPQQEAERLKAVHEARVKIVPRV*
Ga0182008_101300322	3300014497	Rhizosphere	MLVDKIVISQHPHVMVETPDGKRKQSCTIRAIPYQDPQQEAERLKAVHAARVKIVPKL*
Ga0173483_106250381	3300015077	Soil	TELLVDKIVVGPHPHKIVDGRRHYLIRAIPYQDSQQEAERLRAVHEASVKIVPRV*
Ga0173483_108344181	3300015077	Soil	MLVDKIVIAPHPHKIVEERRHYTIRAIPYQDPDLEAERLKAVHEARVKIVPRV*
Ga0132258_111050512	3300015371	Arabidopsis Rhizosphere	MLADKIIIERHPGKIDNDGRRHYLIRAIPYQDPQQEAERLKAVHQARVKIVPRV*
Ga0132258_114929532	3300015371	Arabidopsis Rhizosphere	MLVDKIIIAPHPHKIIDGRRNYTIRAIPYQDPQQEAERLKAVHEARVK
Ga0132258_125636611	3300015371	Arabidopsis Rhizosphere	MLVDKIVIAPHPHKIDKDGRRHYLIRAIPYQDPQQEAERFKAVHEARVKIVPRV*
Ga0132256_1001814304	3300015372	Arabidopsis Rhizosphere	MLVDKIVIAPHPHKIIDGRRHYTIRAIPYQDPQQEAERLKAVHEARVKIVPRV*
Ga0132257_1013130482	3300015373	Arabidopsis Rhizosphere	VDKIIVAPHTHKIIDGRRHYTIRAIPYQDPEMEAARLKAVHAARVKIVPRA*
Ga0132255_1045941521	3300015374	Arabidopsis Rhizosphere	RRALTEILVDKIIIERHPSKIDKDGRRDNLIRAIPYQNPQQGAERLKSVHEARVKIVPRV
Ga0184608_100189081	3300018028	Groundwater Sediment	RRALTEMLVDKIILERHPSKIDKDGRRHYLIRAIPYQDPQQEAARLKAVHQARVKIVPRA
Ga0184621_100302811	3300018054	Groundwater Sediment	MLVDKIIIERHPSKIDKDGRRHYLIRAIPYQDPQQEAERLKAVHDARVKIVPRV
Ga0184621_101373203	3300018054	Groundwater Sediment	ALTEMLVDKIIIERHPSKIDKDSRRHYLIRAISYQDPQQEAERLKAVHEARVKIVPRA
Ga0184619_102674391	3300018061	Groundwater Sediment	MLVDKIIIERHPSKIDKDGRRHYLIRAIPYQDPQQEAERLKAVHEARVKIVPR
Ga0184611_12418862	3300018067	Groundwater Sediment	GDRRALTEMLVDKIIIERHPSKIDKDSRRHYLIRAISYQDPQQEAERLKAVHEARVKIVPRA
Ga0184635_103068551	3300018072	Groundwater Sediment	MLVDKIIIERHPSKIDDSGRRDYVIRAIPYQDPQQEAARLKAVHEARVKIVPRV
Ga0184640_100048732	3300018074	Groundwater Sediment	VDKIVIERHPCKIDKDGRRHYLIRAIPYQDPQQEAERLKTVDEARVKIVPRV
Ga0190268_102763552	3300018466	Soil	EMLVDKIVVAPHPHKIVDGRRHYTIRAIPYQDPQQEAERLKAVHEARVKIIPRV
Ga0190268_112405362	3300018466	Soil	VDKIVIAPHPHKIVDGRRHYTIRAIPYQDPEMEAARLKAVHEARVKIVPTV
Ga0190270_108058861	3300018469	Soil	ALTEMLVDKIVISQHPHEMVDAPDGRRKRSYTIRAIPYQDPVQEAARLKAVHDARVEIVPRV
Ga0190270_120755821	3300018469	Soil	MLVDKIVIERHPSKIDEDGRRHYLIRAIPYQDPEMEAARLKAVHEARVKIVPRV
Ga0190270_126084032	3300018469	Soil	DRRALTEMLVDKIIIERHPSKIDKGGRRHYLIRAIPYQDPQQEAERLKAVHEARVKIVPR
Ga0190270_132501852	3300018469	Soil	DKNMIERHPSNIDKDGRRHYLIPYQDPRQEAERLKAVHEARVKIVPRV
Ga0190271_100939974	3300018481	Soil	MLVDKIIIERHPSKIDKGGRRHYLIRAIPYQDPQQEAERLKAVHEARVKIVPRV
Ga0190271_101408292	3300018481	Soil	MLADKIVIGRHPSKIDKDGRRHYTIRAIPYQDSEQEAERLKAVHEARVKIVPRV
Ga0190271_115830282	3300018481	Soil	MLVDKIIIERHPSKIDKDGRRHHTIRAITFQDPQQEAERLTAVHKAWVKIVPRV
Ga0190271_134513381	3300018481	Soil	MLVDKIVIERHSSKIVDGRRHFTIRAIPYQEPQQEAERLKAVHEARVKIVPRV
Ga0184642_10394941	3300019279	Groundwater Sediment	AQHPHKIDKDGRRHYTIRAIPYQDHEMEAERLKAVHEARVKIVPRV
Ga0190267_111890162	3300019767	Soil	MLVDKIVIAPHPHKIDEDGRRRYTVRAIPYQDSEMEAARLKAVHEARVEIVPRV
Ga0193704_10012221	3300019867	Soil	LDRRALTEMLVDKIIIKRHPSKIDQDGKRHYLIRAIPYQDPEQEAERLKAVHQARVKIVPRA
Ga0193705_10088391	3300019869	Soil	TEMLVDKIVVAPHPHKIVDGRRHYLIRAIPYQDPQQEAERLKAVHEARVKIVPRA
Ga0193696_10534113	3300020016	Soil	IAPHPQKIDKDGRRHYLIRAIPYQDPQQEAERLKAVHEARVKIVPRV
Ga0222621_11366941	3300021510	Groundwater Sediment	TEMLVDKIVVAPHPHKIDQDGRRHYTIRAIPYQDPQQEAARLKAVHQARVKIVPRA
Ga0222624_13968201	3300021951	Groundwater Sediment	MLVDKIIIERHPSKIDKDGKRHYLIRAIPYQDPEMEAARLKAVHEARVKIVPRV
Ga0222622_102699362	3300022756	Groundwater Sediment	EDLSAVDRRALTEMLVDKIIIERHPSKIDKDGKRHYLIRAIPYQDPEMEAARLKAVHEARVKIVPRV
Ga0222622_111693681	3300022756	Groundwater Sediment	KIIIAPHPHKIVDGRRHYTIRAIPYQDPQQEAGRLKAVHEARVKIVPRV
Ga0247789_10914602	3300023266	Soil	MLLDKIVIALHRHKIDKAGRRHYTVRAIRYQDPGQEAERLKAVHEARVRIVPRV
Ga0207647_107784922	3300025904	Corn Rhizosphere	IERYPSKIDKDGRRHYFIRAIPYQDPQQDVERLKAVHDARVKIVPRV
Ga0207657_109177732	3300025919	Corn Rhizosphere	MLVDKIIIERYPSKIDKDGMRHYFIRAIPYQDPEQEAERLKAVHEARVKIIPE
Ga0207694_102281682	3300025924	Corn Rhizosphere	MLVDKIIIERYPSKIDKDGRRHYFIRAIPYQDPQQDVERLKAVHDARVKIVPRV
Ga0209382_105789612	3300027909	Populus Rhizosphere	EDRRALTEMLVDKIIIAPHPHKIVDGKRHYTIRAIPYQDPQQEAERLKAVHQARVKIVAR
Ga0307295_101140681	3300028708	Soil	LTELLVDKIVIAPHPHKIVDSRRHYTIRAIPYQDPQQEAERLTLVHAARVKIVPRV
Ga0307303_101469791	3300028713	Soil	RRALTEMLVDKIVIAPHPHKIVDGRRHYTIRAIPYQDPEMEAWRLKAVHEARVKIVPRV
Ga0307320_101319003	3300028771	Soil	HPRKIDKDGRRHHTIRAIPYQDPQQEAGRLRTVHEARVKIVPRV
Ga0307288_101042883	3300028778	Soil	MLVDKIIIERHPSKIDKDGRRHYVIPYQDPQQEAERLKAVDEAPVKIVPR
Ga0307288_101293022	3300028778	Soil	VRHPSEIDKDGRRHYLIRAIPYQDPQQEAERLKKVHEARVKIVPRV
Ga0307306_100083093	3300028782	Soil	RALTELLVDKIVIAPHPHKIIDSRRHYTIRAIPYQDPQQEAERLKAVHEARVKIVPRV
Ga0307282_100374141	3300028784	Soil	IIERHPSKIDKDGRRHYLIRAIPYQDPQQEAERLKAVHEARVKIVPRA
Ga0307282_100431511	3300028784	Soil	DRRALTEMLVDKIVIAPHPHKIVDGRRHYLIRAIPYQDPQQEAERRKVVHEARVKIVPRI
Ga0307282_101900972	3300028784	Soil	IIVASHPHKIIDGKRHYTIRAIPYQDPQQEAERLKAVHEARVKIVPRV
Ga0307323_100997733	3300028787	Soil	MLIDKIIIAPHPHKIDKDGRRHYLIPAIPYQDPQQEGERLKLVHEA
Ga0307323_102249321	3300028787	Soil	HPRKINKDGRRNHTTRAIPYKDPEMEAARLKVVHEARAKIVPRV
Ga0307323_103018972	3300028787	Soil	TEMLVDKIIIERRPSKIDNDGKRHYLIRAIPYQDPQQEAERLKAVHGARVKIVPRV
Ga0307290_100072712	3300028791	Soil	MLVDKIIIKRHPSKIDQDGKRHYLIRAIPYQDPEQEAERLKAVHQARVKIVPRA
Ga0307294_101563932	3300028810	Soil	LTEMLVDKIIVASHPHKIIDGKRHYTIRAIPYQDPQQEAERLKAVHEARVKIVPRV
Ga0307292_102521541	3300028811	Soil	TEMLVDKIIIERHPSKIDKDGRRHYLIRAIPYQDPEMEVARLKAVHEARVKIVPRV
Ga0307302_100119901	3300028814	Soil	ELLVDKIVIAPHPHKIVDSRRHYLIRAIPYQDPQQEAERLKTVHEARVKIVPRV
Ga0307302_102935882	3300028814	Soil	VRSPAVLVDKIVIALHRHKIDKAGRRHYTVRAIPYQDPRQEAERLKAVHEVRVRIVPRV
Ga0307296_106012002	3300028819	Soil	EHLSLGSSSPQQGALTEMLIDKLIIAPHPHKIVDGRRRYTIRAIPYQDPQQEAERLKAVHEARVKIVPRV
Ga0307312_100622713	3300028828	Soil	MLIDKIIIAPHPHKIVDGRRRYTIRAIPYQDPQQEAERLKAVHEARVKIVPRV
Ga0307312_104361243	3300028828	Soil	MLVDKIIIERHPSKIDKDGRRHYLIRAIPYQDPQQAAERLKAVHDAR
Ga0307312_105538651	3300028828	Soil	LSAEDRRALTEMLIDKIIIYRHPNKIIDGKKHYTIRAIPYQDPDLEAEWLKAVHEARVKIVPRI
Ga0307312_108457022	3300028828	Soil	MLVDKIIIERHPSKIEKDGRRHYLIRPIPYQDPQQEAERLKAVHEARVKIVPRV
Ga0307289_100601843	3300028875	Soil	MLVDKIIIERRPSKIDNDGKRHYLIRAIPYQDPQQEAERLKAVHGARVKIVPRV
Ga0307278_100220183	3300028878	Soil	DKIVVAPHPHKIVDGRRHYTIRAIPYQDPEMEAERLKAVHEARVKIVPRV
Ga0307278_101521062	3300028878	Soil	MLVDKIIIARYPSKIDKDGRRHYLIRAIPYQDPQQEAERLKAVHEARVKIVPRV
Ga0307278_101546991	3300028878	Soil	MLVDKIIIERHPSKIDKDGRRHYLIRSIAYQDPQQEAERLKAVREARVKIVPRV
Ga0308194_101926891	3300031421	Soil	RHPSKIDKDGRRHYLIRAIPYQDPDLEEERLKAVHEARVKIVVRV
Ga0307405_103226662	3300031731	Rhizosphere	LIGALTEMLVDKIIIERHPSKIDKDGRRHYLVRAIPYQDPQQEAERLKAVHEARVKIVSR
Ga0307410_121337461	3300031852	Rhizosphere	MLVDKIIIERHPSKIDKDGRRHYLIRAIPYHDPQQEAERLKEVHEARVKIVPRV
Ga0307412_108126762	3300031911	Rhizosphere	RALTEMLVDKIIIERHPSKIDKDGSRHYLIRAIPYQDPQQEAERLKAVHEARVKIVPRV
Ga0307414_112463302	3300032004	Rhizosphere	ADRRALTEMLVDKIIIERHPSKIDKDGRRQYLIRAIPYQDPQQEAERLKAVHEARVKIVPRV
Ga0307414_114795173	3300032004	Rhizosphere	VDKIIIAPHRHKIDKAGRRHYTVRAIPYQDPRQEAERLKAVHEARVRIVPRV
Ga0307470_111743111	3300032174	Hardwood Forest Soil	VIIKTNGRKIVIDKIVIAAHHHKIVDGRRHYTIRAIPYQDLDLEAERLKAVHEARVKIVPRV
Ga0307471_1026406542	3300032180	Hardwood Forest Soil	MLVDKIIIERHPSEIDKDGRRHYLIRAIPYQDHQQEAERLKAVHEARVKIVPRV
Ga0307472_1001755314	3300032205	Hardwood Forest Soil	LTELLVDKIIIAPHPHKIVDGRRHYTIRAIPYQDPEMEAARLKAVHQARVKIVPGV
Ga0247829_111900542	3300033550	Soil	HHRRHPSKIDKGGRRHYLLRAIPYQDPQQEAERLKAVHKARVKIGPRV
Ga0364941_030322_2_160	3300034417	Sediment	VDKIIIERHPSKIDKDGRRHYLIRAIPFQNPQQEAERLKAVHEARVKIVPRV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056731

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences