Metagenome / Metatranscriptome Family F054654

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054654
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	110 residues
Representative Sequence	VKKLIVAIAVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCAEL
Number of Associated Samples	97
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.10 %
% of genes near scaffold ends (potentially truncated)	35.25 %
% of genes from short scaffolds (< 2000 bps)	91.37 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.237 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.827 % of family members)
Environment Ontology (ENVO)	Unclassified (33.094 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.482 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 32.14% β-sheet: 15.00% Coil/Unstructured: 52.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00196	GerE	24.46
PF14026	DUF4242	7.19
PF01152	Bac_globin	1.44
PF06441	EHN	1.44
PF07077	DUF1345	1.44
PF00211	Guanylate_cyc	1.44
PF13540	RCC1_2	1.44
PF14520	HHH_5	0.72
PF01155	HypA	0.72
PF00155	Aminotran_1_2	0.72
PF01179	Cu_amine_oxid	0.72
PF00491	Arginase	0.72
PF13424	TPR_12	0.72
PF00440	TetR_N	0.72
PF00903	Glyoxalase	0.72
PF08450	SGL	0.72
PF03466	LysR_substrate	0.72
PF04879	Molybdop_Fe4S4	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.44
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.44
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	1.44
COG4291	Uncharacterized membrane protein	Function unknown [S]	1.44
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.72
COG0375	Hydrogenase maturation factor HypA/HybF, metallochaperone involved in Ni insertion	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.72
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.72
COG3733	Cu2+-containing amine oxidase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.24 %
Unclassified	root	N/A	46.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.24 %
Unclassified	root	N/A	46.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.24 %
Unclassified	root	N/A	46.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.37 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.04 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.22 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	5.04 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.76 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	20.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.04 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.44 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	20.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.04 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.44 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	20.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.04 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.44 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102228030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300003987\|Ga0055471_10153537	Not Available	703	Open in IMG/M
3300003996\|Ga0055467_10211600	Not Available	601	Open in IMG/M
3300004013\|Ga0055465_10073874	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300004114\|Ga0062593_100057183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2481	Open in IMG/M
3300004114\|Ga0062593_100871379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	906	Open in IMG/M
3300004114\|Ga0062593_100881710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	902	Open in IMG/M
3300004114\|Ga0062593_101958996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	649	Open in IMG/M
3300004114\|Ga0062593_102747076	Not Available	561	Open in IMG/M
3300004114\|Ga0062593_102983046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300004156\|Ga0062589_100179603	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300004156\|Ga0062589_100616578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	945	Open in IMG/M
3300004156\|Ga0062589_101070676	Not Available	760	Open in IMG/M
3300004156\|Ga0062589_102485098	Not Available	536	Open in IMG/M
3300004157\|Ga0062590_100175309	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300004157\|Ga0062590_101784343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300004463\|Ga0063356_100964718	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300004463\|Ga0063356_101005376	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300004463\|Ga0063356_101802577	Not Available	919	Open in IMG/M
3300004463\|Ga0063356_102287711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300004463\|Ga0063356_103135771	Not Available	712	Open in IMG/M
3300004463\|Ga0063356_105165226	Not Available	561	Open in IMG/M
3300004480\|Ga0062592_100100271	All Organisms → cellular organisms → Bacteria	1792	Open in IMG/M
3300004480\|Ga0062592_100874803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300004643\|Ga0062591_101047224	Not Available	781	Open in IMG/M
3300005093\|Ga0062594_100156700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1504	Open in IMG/M
3300005093\|Ga0062594_100729520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	900	Open in IMG/M
3300005329\|Ga0070683_100626818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1029	Open in IMG/M
3300005329\|Ga0070683_101352159	Not Available	685	Open in IMG/M
3300005347\|Ga0070668_101945738	Not Available	542	Open in IMG/M
3300005438\|Ga0070701_10700669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300005440\|Ga0070705_101903996	Not Available	506	Open in IMG/M
3300005441\|Ga0070700_100694782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300005441\|Ga0070700_100870439	Not Available	731	Open in IMG/M
3300005459\|Ga0068867_100386207	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300005544\|Ga0070686_100878090	Not Available	728	Open in IMG/M
3300005549\|Ga0070704_100658013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	925	Open in IMG/M
3300005564\|Ga0070664_100795654	Not Available	884	Open in IMG/M
3300005577\|Ga0068857_101395745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300005615\|Ga0070702_101284997	Not Available	593	Open in IMG/M
3300005615\|Ga0070702_101812762	Not Available	510	Open in IMG/M
3300005617\|Ga0068859_100869184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	987	Open in IMG/M
3300005844\|Ga0068862_100472700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1185	Open in IMG/M
3300006844\|Ga0075428_100798541	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300006881\|Ga0068865_101921535	Not Available	536	Open in IMG/M
3300009094\|Ga0111539_10066980	All Organisms → cellular organisms → Bacteria	4241	Open in IMG/M
3300009094\|Ga0111539_10433860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1530	Open in IMG/M
3300009101\|Ga0105247_11768556	Not Available	513	Open in IMG/M
3300009147\|Ga0114129_10479023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1629	Open in IMG/M
3300009148\|Ga0105243_10311179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1431	Open in IMG/M
3300009148\|Ga0105243_10864608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300009148\|Ga0105243_12391302	Not Available	567	Open in IMG/M
3300009156\|Ga0111538_10100174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3682	Open in IMG/M
3300009156\|Ga0111538_10885433	Not Available	1130	Open in IMG/M
3300009553\|Ga0105249_11516866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300010037\|Ga0126304_10961015	Not Available	582	Open in IMG/M
3300010375\|Ga0105239_11317322	Not Available	833	Open in IMG/M
3300010397\|Ga0134124_13225971	Not Available	500	Open in IMG/M
3300011107\|Ga0151490_1652286	Not Available	526	Open in IMG/M
3300011119\|Ga0105246_10689306	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300011423\|Ga0137436_1117261	Not Available	706	Open in IMG/M
3300012882\|Ga0157304_1090349	Not Available	542	Open in IMG/M
3300012897\|Ga0157285_10060559	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300012901\|Ga0157288_10108419	Not Available	767	Open in IMG/M
3300012905\|Ga0157296_10417336	Not Available	507	Open in IMG/M
3300012907\|Ga0157283_10066084	Not Available	878	Open in IMG/M
3300012911\|Ga0157301_10431145	Not Available	518	Open in IMG/M
3300012914\|Ga0157297_10105956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	852	Open in IMG/M
3300012957\|Ga0164303_10453385	Not Available	808	Open in IMG/M
3300012958\|Ga0164299_10515112	Not Available	799	Open in IMG/M
3300012960\|Ga0164301_10027899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2645	Open in IMG/M
3300012961\|Ga0164302_10984010	Not Available	656	Open in IMG/M
3300012985\|Ga0164308_10020799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3820	Open in IMG/M
3300012985\|Ga0164308_12142840	Not Available	521	Open in IMG/M
3300012987\|Ga0164307_10046368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2467	Open in IMG/M
3300012988\|Ga0164306_10008835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5100	Open in IMG/M
3300013297\|Ga0157378_12777199	Not Available	542	Open in IMG/M
3300014265\|Ga0075314_1005610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2196	Open in IMG/M
3300014267\|Ga0075313_1019109	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1551	Open in IMG/M
3300014270\|Ga0075325_1073040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300014272\|Ga0075327_1351137	Not Available	500	Open in IMG/M
3300014326\|Ga0157380_10385120	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1325	Open in IMG/M
3300014326\|Ga0157380_11231283	Not Available	793	Open in IMG/M
3300014326\|Ga0157380_11239401	Not Available	791	Open in IMG/M
3300014326\|Ga0157380_11892168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300014745\|Ga0157377_10417361	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300014968\|Ga0157379_10725165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	934	Open in IMG/M
3300015371\|Ga0132258_10798559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2379	Open in IMG/M
3300015371\|Ga0132258_13409384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1091	Open in IMG/M
3300015371\|Ga0132258_13811449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1027	Open in IMG/M
3300015372\|Ga0132256_101013716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300015372\|Ga0132256_102633868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300015372\|Ga0132256_102932791	Not Available	573	Open in IMG/M
3300015373\|Ga0132257_101601450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300015373\|Ga0132257_102194214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300015373\|Ga0132257_103270620	Not Available	590	Open in IMG/M
3300015374\|Ga0132255_100887941	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300015374\|Ga0132255_105660468	Not Available	529	Open in IMG/M
3300019356\|Ga0173481_10271460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300019356\|Ga0173481_10305408	Not Available	742	Open in IMG/M
3300019361\|Ga0173482_10224652	Not Available	784	Open in IMG/M
3300022883\|Ga0247786_1051068	Not Available	838	Open in IMG/M
3300023062\|Ga0247791_1047995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300025559\|Ga0210087_1009535	All Organisms → cellular organisms → Bacteria	2075	Open in IMG/M
3300025901\|Ga0207688_10019775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3671	Open in IMG/M
3300025926\|Ga0207659_11828944	Not Available	516	Open in IMG/M
3300025933\|Ga0207706_10954353	Not Available	722	Open in IMG/M
3300025935\|Ga0207709_10492178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	955	Open in IMG/M
3300025938\|Ga0207704_10998814	Not Available	708	Open in IMG/M
3300025972\|Ga0207668_10413863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1143	Open in IMG/M
3300026032\|Ga0208419_1002460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2151	Open in IMG/M
3300026075\|Ga0207708_10135606	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1928	Open in IMG/M
3300026075\|Ga0207708_10838379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	793	Open in IMG/M
3300026075\|Ga0207708_11877339	Not Available	525	Open in IMG/M
3300027424\|Ga0209984_1042469	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300027717\|Ga0209998_10040789	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1053	Open in IMG/M
3300027907\|Ga0207428_10543558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	841	Open in IMG/M
3300028587\|Ga0247828_10170384	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300028589\|Ga0247818_10527525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300028596\|Ga0247821_11231001	Not Available	510	Open in IMG/M
3300028768\|Ga0307280_10384484	Not Available	522	Open in IMG/M
3300028784\|Ga0307282_10129409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1187	Open in IMG/M
3300028802\|Ga0307503_10467611	Not Available	673	Open in IMG/M
3300028802\|Ga0307503_10783307	Not Available	543	Open in IMG/M
3300028809\|Ga0247824_10982322	Not Available	533	Open in IMG/M
3300028812\|Ga0247825_11353765	Not Available	521	Open in IMG/M
3300030336\|Ga0247826_10749486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300030336\|Ga0247826_11200509	Not Available	608	Open in IMG/M
3300030336\|Ga0247826_11777731	Not Available	504	Open in IMG/M
3300031547\|Ga0310887_11136605	Not Available	502	Open in IMG/M
3300031824\|Ga0307413_11742723	Not Available	556	Open in IMG/M
3300031854\|Ga0310904_11067060	Not Available	578	Open in IMG/M
3300031858\|Ga0310892_10518040	Not Available	797	Open in IMG/M
3300032013\|Ga0310906_10785854	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300032013\|Ga0310906_11133171	Not Available	567	Open in IMG/M
3300032075\|Ga0310890_10507085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300032075\|Ga0310890_11557740	Not Available	546	Open in IMG/M
3300032179\|Ga0310889_10447307	Not Available	648	Open in IMG/M
3300033551\|Ga0247830_10434472	Not Available	1026	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.15%
Host-Associated	Host-Associated	38.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.55%
Plants	Host-Associated → Plants	38.85%
Aquatic	Environmental → Aquatic	3.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.55%
Marine	Environmental → Aquatic → Marine	2.88%
Sediment	Environmental → Aquatic → Sediment	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.79%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.60%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	12.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	12.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	12.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.19%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	5.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.04%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.60%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.16%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.44%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.44%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026032	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1022280301	3300000956	Soil	MKRLVILAAAAFLLVAPATAVAAAPDTPRGDTYVEIWCDSDASNADGTGARSVTPGNATAEGGVEDDVLAKRVDARAIQPDKDPGGKDTATARYNANAGVVQGWFCAER*
Ga0055471_101535371	3300003987	Natural And Restored Wetlands	MKKLIIALAVAALGVGSLGVSLAAAVPEITPRADQSVEIWCDSDATNLDGTGPGSITPGDSGPEGGAEDDVLAKRLDARAIQPEKDPGGKDTATDRFNSTAGVVQGWFCGEL*
Ga0055467_102116002	3300003996	Natural And Restored Wetlands	LIIALAVAALGVGSLGVSLAAAVPEITPRADLSVEIWCDSDATNLDGTGPGSITPGDSGPEGGAEDDVLAKRLDARAIQPEKDPGGKDTATDRFNSTAGVVQGWFCGEL*
Ga0055465_100738742	3300004013	Natural And Restored Wetlands	VKKLILAMAAGALSVGTLGVSVAAAVPGTTPRADGFVEIWCDSNATNLDGTGLGSITPGNSDAEGGVEDDVLAKRLDSRAIQPDKDPGGKDTATERFNATAGLVQGWFCDEV*
Ga0062593_1000571833	3300004114	Soil	MNKLVIAIALGGVVVSAPFGASPAAAASTATPRADGYIEIWCDSDATNADGTGSGSVTPGDSAPENGAEDDVLAKRVDARAIQLAKDPGGKDTATERYNLTAGQVQGWFCAEVF*
Ga0062593_1008713792	3300004114	Soil	MRRLTLVAPGALLASLLIAAPVAATVPETTNRPDAYVDVWCDTNPTNADGTGAASITPGDASAEGGVEDDALAKRVDARAIQPEKDPGGKDTATERYNATAGLLQGYFCGEA*
Ga0062593_1008817101	3300004114	Soil	VKKLIVAIAVSALAVGTAGVSLVAAASPTTPRADGFVEIWCDSDATNRDGTGSGSVTPGDSGPEGGYEDDVLAKRVDARAIQLDKDPGGKDTATERYNANAGVVQGWFCAEQ*
Ga0062593_1019589962	3300004114	Soil	MKRLVILAAAAFLLAAPATAVAAAPETPRGDSYVEIWCDSDASNADGTGARSVTPGNATAEGGLEDDVLAKRVDARAIQPDKDPGGKDTATARYNANAGVVQGWFCAER*
Ga0062593_1027470762	3300004114	Soil	MKKLIIAIAAAALGVGSLGPSTAAAVQEGTPRADQSVEIWCDSDATNLDGTGPASVTPGNSGPERGTEDDVLAKRVDARAIQPEKDPGGKDTATERYNATAGAVQGWFCAEV*
Ga0062593_1029830462	3300004114	Soil	MRRLSLPLVVAFGATLLGASPAAAASETTRGDAFVEIWCDSDATNLDGTGPGSVTPGNSGPEAGAEDDVLAKVVDARAIQPDKDPGGKDTATDR
Ga0062589_1001796033	3300004156	Soil	MKKLVIAIALGALAMSSPLGVSPAAAVPGTTNRTDAYVDIWCDSDPTNPDGTGPGSITPGNSAHEGGAEDDVLAKRVDARAIQPEKDPGGKDTATARYNATAGVVQGWFCGEA*
Ga0062589_1006165782	3300004156	Soil	GCAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCAEL*
Ga0062589_1010706762	3300004156	Soil	IAIALGGVLVSAPFGASPAAAASTATPRADGYIEIWCDSDATNADGTGSGSVTPGDSAPENGAEDDVLAKRVDARAIQLAKDPGGKDTATERYNLTAGQVQGWFCAEVF*
Ga0062589_1024850981	3300004156	Soil	MPRLSLPLAVAFGATLLGASPVAAASETTRGDAFVEIWCDSDATNADGTGPGSVTPGSSGPEAGAEDDVLAKVVDARAIQPDKDPGGKDTATDRYNATAGALQGWFCAEA*
Ga0062590_1001753092	3300004157	Soil	MKKLLVAFVAAALGVGTLCGSAMATVPGSTNRADAFIDIWCDSDATNLDGTGPGSITPGDSGPEGGAEDDVLAKRVDARAIQPDKDPGGKDTATARYNATAGVVQGWYCGEV*
Ga0062590_1017843432	3300004157	Soil	MKRLVTLAAATFLLVAPASVTAAAPGTPRADFYIEIWCDSDATNADGTGPASVTPGNSGPEGGGEDDVLAKRVDARAIQLDRDPGGKDTATERYNLNAGLVQGWFCAEI*
Ga0063356_1009647182	3300004463	Arabidopsis Thaliana Rhizosphere	MRRLTLVAPGALLASLLIAAPVAATVPETTNRPDAYVDVWCDTNPTNADGTGAASITPGDASAEGGVEDDALAKRVDARAIQPDKDPGGKDTATERYNATAGLLQGYFCGEA*
Ga0063356_1010053762	3300004463	Arabidopsis Thaliana Rhizosphere	MKKTTIAVVVGALTLGLQLGLAPAALAVPGTTTRADASVEIWCDSDAANLDGTGPASVTPGNSAPEGGAEDDVLAKRVDARAIQLEKDPGGKDTATERYNAYAGVVQGWFCAEV*
Ga0063356_1018025772	3300004463	Arabidopsis Thaliana Rhizosphere	MTRIIRAVAVGALAVGLQLGVAPAAFAVPGTTTRADASVEIWCDSDPTNLDGTGPGSITPGNSAPEGGAEDDVIAKRVDARAIQPEKDPGGKDTATARYNATAGVVQGWFCGEA*
Ga0063356_1022877112	3300004463	Arabidopsis Thaliana Rhizosphere	MRRLSLTAPGAVLASLLVVAPVAASVPQTTGRTDAYVNIWCDSNPTNLDGTGAASITPGDASAEGGIEDDVLAKRVDARAIQPEKDPGGKDTATERYNATAGAVQGYFCGE*
Ga0063356_1031357713	3300004463	Arabidopsis Thaliana Rhizosphere	VSPAAAAAPDTPRADAYIEIWCDSDASNADGTGAASVTPGDASAENGAEDDVIAKRVDTRAVQLDKEPGGKDTATERYNARAGVVQGWFCAER*
Ga0063356_1051652261	3300004463	Arabidopsis Thaliana Rhizosphere	MRRLSLVAPGAVLASLLVVAPVAATVPETTGRTDAYINIWCDSNPTNLDGTGAASITPGDASAEGGVEDDVLAKRVDARAIQPEKDPGGKDTATERYNATAGLVQGYFCGE*
Ga0062592_1001002712	3300004480	Soil	MKKLAIAIAVSALAVSSPLGASPAAAVPGTTTRADESVDIWCDSDPTNLDGTGPGSITPGDSAPEGGAEDDVIAKRVDARAIQPEKDPGGKDTATARYNATAGVVQGWFCGEA*
Ga0062592_1008748032	3300004480	Soil	VGSSRRVGPGKVHRPGGLSMKGLTMRRLSLLAPGAVLASLLIAAPVAATVPETTNRPDPYVNVWCDTDATNADGTGAGSITPGDASAEGGFEDDALAKRVDARAIQPEKDPGGKDTATDRYNATAGALQGYFCGEA*
Ga0062591_1010472241	3300004643	Soil	VKKLIVAIAVSALAVGTAGVSLVAAASPTTPRADGFVEIWCDSDATNRDGTGSGSVTPGDSGPEGGYEDDVLAKRVDARAIQLDKDPGGKDTATERYNANAGVVQGWFC
Ga0062594_1001567002	3300005093	Soil	VKKLIVAIAVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCAEL*
Ga0062594_1007295202	3300005093	Soil	MKGLTMRRLSLLAPGAVLASLLIAAPVAATVPETTNRPDPYVNVWCDTDATNADGTGAGSITPGDASAEGGFEDDALAKRVDARAIQPEKDPGGKDTATDRYNATAGALQGYFCGEA*
Ga0070683_1006268181	3300005329	Corn Rhizosphere	MRRLTLLVPGAAVIASLLAVAPVAASVPSTTDRTDAYVDVWCDSDATNLDGTGPGSVTPGDASAEGGAEDDVLAKRVDARALQPDKDPGGKDTATDQYNANAGVVQGWFCAEA*
Ga0070683_1013521592	3300005329	Corn Rhizosphere	VKKLIVAIAVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNATNFDGTGPGSVTPGNSGPEGGDEDDVLAKRVDARAIQLDKDPGGKDTATERYNGNAGIVQGWFCAEQ*
Ga0070668_1019457381	3300005347	Switchgrass Rhizosphere	SPVAAAAPDTPRADGYVEIWCDSDATNADGTGPGSVTPGIASAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATAQYNAHAGLVQGWFCAEA*
Ga0070701_107006691	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRRMSLSVLGVAVATSLIAGSPVAAAAPDTPRADGYVEIWCDSDATNADGTGPGSVTPGIASAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATAQYNAHAGLVQGWFCAEA*
Ga0070705_1019039962	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSLSVLGVAVATSLIAVSPVAAAAPDTPRADGYVEIWCDSDATNADGTGPGSVTPGIASAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATAQYNAHAGLVQGWFCAEA*
Ga0070700_1006947822	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLIVAIATAALGVGTIGVSAVAAVPGTTNRADTYVDIWCDSDATNRDGTGPGSITPGDSGPEGGAEDDVIAKRVDARAIQPEKDPGGKDTATERYNATAGVVQGWFCGE
Ga0070700_1008704392	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRRMSLSVLGVAVATSLIAVSPVAAAAPDTPRADGYVEIWCDSDATNADGTGPGSVTPGIASAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATEQYNAHAGLVQGWFCAEA*
Ga0068867_1003862073	3300005459	Miscanthus Rhizosphere	MKKLIVAIATAALGVGTIGVSAVAAVPGTTNRADTYVDIWCDSDATNRDGTGPGSITPGDSGPEGGAEDDVIAKRVDARAIQPGKDPGGKDTATERYNATAGVVQGWFC
Ga0070686_1008780902	3300005544	Switchgrass Rhizosphere	MKRLGLLLPGAVVASLLVAAPVGAAAPNTPRGDTYVEIWCDSDATNADGTGAASITPGDASAEGGVEDDVIAKRVDARAIQPEKDPGGKDTATDRYNAHAGVVQGWFCGEL*
Ga0070704_1006580132	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTTIAVVVGALTLGLQLGLAPVALAVPGTTTRADASVEIWCDSDAANLDGTGPASVTPGNSAPEGGAEDDVLAKRVDARAIQLEKVPGGKDTATERYNAYAGVVQGWFCAEV*
Ga0070664_1007956542	3300005564	Corn Rhizosphere	VKKLIVAIAVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPRSVTPGNSRPEGGDEDDVLAKRVDARAIQLDKDPGGKDTATERYNGNAGIVQGWFCAEQ*
Ga0068857_1013957451	3300005577	Corn Rhizosphere	LTLGLQLGLAPAALAVPGTTTRADASVEIWCDSDPDNLDKTGPASVTPGNSAPEGGAEDDVLAKRVDARAIQLEKDPGGKDTATERYNAYAGVVQGWFCAEV*
Ga0070702_1012849972	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GGLAMRRMSLSVLGVAVATSLIAVSPVAAAAPDTPRADGYVEIWCDSDATNADGTGTGSVTPGIASAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATAQYNAHAGLVQGWFCAEA*
Ga0070702_1018127621	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTTIAVVVGALTLGLQLGLAPVALAVPGTTTRADASVEIWCDSDAANLDGTGPASVTPGNSAPEGGAEDDVLAKRVDARAIQLEKDPGGKDTATERYNAYAGVVQGWFCAE
Ga0068859_1008691843	3300005617	Switchgrass Rhizosphere	VKKLIVAIAVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKD
Ga0068862_1004727001	3300005844	Switchgrass Rhizosphere	VKKLIVAIAVSALGVGCAGVSLVAEASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCAEL*
Ga0075428_1007985412	3300006844	Populus Rhizosphere	MKKLVIAIAVGALAVSSPLGAAPAAAVPGTTTRADASVDIWCDSDATNLDGTGAGSITPGNSAPEGGAEDDVLAKRVDARAIQPEKDPGGKDTATDRFNATAGVVQGYFCGEA*
Ga0068865_1019215351	3300006881	Miscanthus Rhizosphere	MSLSVLGVAVATSLIAGSPVAAAAPDTPRADGYVEIWCDSDATNADGTGPGSVTPGIASAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATAQYNAHAGLVQGWFCAEA*
Ga0111539_100669804	3300009094	Populus Rhizosphere	MRKTTIAVVVGALTVGLQLGLAPAALAVPGTTTRADASVEIWCDSDPNNLDKTGPASVTPGNSGPEGGAEDDVLAKRVDARAIQPEKDPGGKDTATARYNATAGLVQGWFCADA*
Ga0111539_104338603	3300009094	Populus Rhizosphere	MKKLAIAIALAALVGSSPLGASPAAAVPGTTPRADASVEIWCDSVPTNFDGTGPGSITPHDSAPEGGDEDDVLAKRVDARAIQPEKDPGGKDTATARFNATAGLVQGWFCGEA*
Ga0105247_117685561	3300009101	Switchgrass Rhizosphere	EGRVVVKKLMVAIAVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCAEL*
Ga0114129_104790233	3300009147	Populus Rhizosphere	MKKLVIAIAVGALAVSSPLGAAPAAAVPGTTTRADASVDIWCDSDATNLDGTGAGSITPGNSAPEGGAEDDVLAKRVDARAIQPEKDPGGKDTATDRFNATAGVVQGWFCGEA*
Ga0105243_103111794	3300009148	Miscanthus Rhizosphere	VLGVAVATSLIAVSPVAAAAPDTPRADGYVEIWCDSDATNADGTGPGSVTPGIASAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATAQYNAHAGLVQGWFCAEA*
Ga0105243_108646083	3300009148	Miscanthus Rhizosphere	MKKLIVAIATAALGVGTIGVSAVAAVPGTTNRADTYVDIWCDSDATNRDGTGPGSITPGDSGPEGGAEDDVIAKRVDARAIQPEKDPGGKDTATERYNATAGVVQGWFCG
Ga0105243_123913021	3300009148	Miscanthus Rhizosphere	REGETVMKKSTIAVVAGALTLGLQLGLAPAALAVPGTTTRADASVEVWCDSDATNLDGTGPASVTPGNSATEGGAEDDVLAKRVDARAIQLEKDPGGKDTATERYNAYAGVVQGWFCAEV
Ga0111538_101001743	3300009156	Populus Rhizosphere	MKKLAIAIALAALVGSSPLGASPAAAVPGTTPRADASVEIWCDSVPTNFDGTGPGSITPHDSAPEGGDEDDVVAKRVDARAIQPDKDPGGKDTATARFNATAGLVQGWFCGEA*
Ga0111538_108854333	3300009156	Populus Rhizosphere	MRKTTIAVVVGALTVGLQLGLAPAALAVPGTTTRADASVEIWCDSDPNNLDKTGPASVTPGNSGPEGGAEDDVLAKRVDARAIQPEKDPGGKDTATARYNATAGVVQGWFCADA*
Ga0105249_115168661	3300009553	Switchgrass Rhizosphere	MALSVLGVAVATSLIAVSPAAAAAPDTPRADAFVEIWCDTDATNQDRTGPASVTPGDATAEGAEEDDVLAKRVDARAIQPEKDPGGKDTATARYNAHAGVVQGWFCAEA*
Ga0126304_109610151	3300010037	Serpentine Soil	MKKLVIAIAIGVLAVGSPLGASQAAAVPETSSRADGYVDIWCDSDPTNLHGTGPGSITPGDGAPEGGAEDDVLAKRVDAQAIQPEKDPGGKDTATEHYNATAGVVQGWFCGEA*
Ga0105239_113173222	3300010375	Corn Rhizosphere	AGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQLDKDPGGKDTATERYNGNAGIVQGWFCAEQ*
Ga0134124_132259712	3300010397	Terrestrial Soil	VKKLIVAIAVTALGVGWAGVSLVAAASPTTPRGDTFVEIWCDSNATNFDGTGPGSVTPGNSGPEGGDEDDVLAKRVDARAIQLDKDPGGKDTATERYNGNAGIVQGWLCAEQ*
Ga0151490_16522861	3300011107	Soil	MRRLSLSVLGAAVTATLIAVSPVAAAAPDTPRADRFVEIWCDTDATNADGTGPGSVTPRVAGAEGGAEDDVLAKRVDARAIQPDKDPGGKDTATDRYNAHAGVVQGWFCAET*
Ga0105246_106893063	3300011119	Miscanthus Rhizosphere	MKKTTIAVVVGALTLGLQLGLAPAALAVPGTTTRADASVEIWCDSDAANLDGTGPASVTPGNSAPEGGAEDDVLAMLVDARAIQLEKDPGGKDTATERYNAYAGVVQGWFCAEV*
Ga0137436_11172611	3300011423	Soil	MKKLIVAVAVAALGVGSAGVSPVAAASPTTPRGDAFFEIWCDSDPTNGDETGPSSITPGDSSHEGGAEDDVLAKRVDARAIQPDKEPGGKDTATERYNATAGLVQGWYCGEVRG*
Ga0157304_10903492	3300012882	Soil	AAIVAATLLAVSPVAAAAPQTPRHDGYIEIWCDSDASNADGTGAASVTPGDASAERGAEDDVLAKRVDARAVQLDKDPGGKDTATERYNAYAGVVQGWFCAEM*
Ga0157285_100605591	3300012897	Soil	ADQEGRVVVKKLIVAIAVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNASNFDGTGPGSVTPGNSGPEGGDEDDVLAKRVDARAIQLDKDPGGKDTATERYNGNAGIVQGWFCAEQ
Ga0157288_101084192	3300012901	Soil	VDQEGRDVVKKLIVAIAVSALAVGTAGVSLVAAASPTTPRADGFVEIWCDSDATNRDGTGSGSVTPGDSGPEGGYEDDVLAKRVDARAIQLDKDPGGKDTATERYNANAGVVQGWFCAEQ
Ga0157296_104173361	3300012905	Soil	VKKLIVAIAVSALGVAWAGVSLVAAASPTTPRGDTFVEIWCDSNASNFDGTGPGSVTPGNSGPEGGDEDDVLAKRVDARAIQLDKDPGGKDTATERYNGNAGIVQGWFCAEQ*
Ga0157283_100660842	3300012907	Soil	VKKLIVAIAVTALGLGWAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCAEL*
Ga0157301_104311452	3300012911	Soil	VKKLIVAIAVTALGVGWAGVSLVAAASPTTPRGDTFVEIWCDSNATNFDGTGPGSVTPGNSGPEGGDEDDVLAKRVDARAIQLDKDPGGKDTATERYNGNAGIVQGWFCADQ*
Ga0157297_101059562	3300012914	Soil	MKKLVIATALGALAMSSPLGVSPAAAVPGTTNRTDAYVDIWCDSDPTNPDGTGPGSITPGNSAHEGGAEDDVLAKRVDARAIQPEKDPGGKDTATARYNATAGVVQGWFCGEA*
Ga0164303_104533851	3300012957	Soil	MKRLIIAITAAALSLGSLGVAAVGAASPTTPRGDIYIEIWCDSDATNLDGTGPGSITPGASGPEGGVEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCGEV*
Ga0164299_105151122	3300012958	Soil	MKKLIIAITAATLSIGSLGVTAAGAASPTTPRGDTYIEIWCDSDATNLDGTGPGSITPGASGPEGGVEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCGEV*
Ga0164301_100278991	3300012960	Soil	VMKKLIIAITAATLSIGSLGVTAAGAASPTSPRGDSYIEIWCDSDATNLDRTGPGSITPGASGPEGGVEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCDEV*
Ga0164302_109840102	3300012961	Soil	MKKLIIAITAATLSIGSLGVTAAGAASPTSPRGDSYIEIWCDSDATNLDRTGPGSITPGASGPEGGVEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCGEV*
Ga0164308_100207993	3300012985	Soil	MKRLIIAITAAALSLGSLGVAAAGAASPTTPRGDIYIEIWCDSDATNLDGTGPGSITPGASGPEGGVEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCGEV*
Ga0164308_121428401	3300012985	Soil	MRRLTVLAPAAIVAATLLAVSPVAAAAPQTPRHGGYIEIWCDSDASNADGTGASSVTPGDASAERGAEDDVLAKRVDARAVQLDKDPGGKDTATERYNAHAGVVQGWFCAE
Ga0164307_100463683	3300012987	Soil	MKRLIIAITAAALSLGSLGVAAAGAASPTTPRGDIYIEIWCDSDATNLDRTGPGSITPGASGPEGGVEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCGEV*
Ga0164306_100088353	3300012988	Soil	MKRLIIAITAAALSLGSLGVTAAGAASPTTPRGDTYIEIWCDSDATNLDGTGPGSITPGASGPEGGVEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCGEV*
Ga0157378_127771991	3300013297	Miscanthus Rhizosphere	GGNVMKKLIVALAAAALSVGALTGSALATVPGSTHRTDVYIDIWCDSDATNPDGTGSGSITPGDSSAEGGVEDDVLAKRVDARAIQPDKDPGGKDTATERYNATAGVVQGWFCGEVRG*
Ga0075314_10056102	3300014265	Natural And Restored Wetlands	MKKLIIAIAVAALGVGSLGVSLAAAVPEITPRADQSVEIWCDSDATNLDGTGPGSITPGDSGPEGGAEDDVLAKRLDARAIQPEKDPGGKDTATDRFNSTAGVVQGWFCGEL*
Ga0075313_10191092	3300014267	Natural And Restored Wetlands	MKKLILAMAAGALSVGTLGVSVVAAVPGTTPRADGFVEIWCDSNATNLDGTGPGSITPGNSDAEGGVEDDVLAKRLDSRAIQPDKDPGGKDTATERFNATAGLVQGWFCDEV*
Ga0075325_10730401	3300014270	Natural And Restored Wetlands	MKKLILAMAAGALSVGTLGVSEAAAVPGTTPRAGGFVEIWCDSNATNLDGTGLGSITPGNSDAEGGVEDDVLAKRLDSRAIQPDKDPGGKDTATERFNATAGLVQGWFCDEV*
Ga0075327_13511371	3300014272	Natural And Restored Wetlands	MAAGALSVGTLGVSVVAAVPGTTPRADGFVEIWCDSNATNLDGTGPGSITPGNSDAEGGVEDDVLAKRLDSRAIQPDKDPGGKDTATERFNATAGLVQGWFCDEV*
Ga0157380_103851203	3300014326	Switchgrass Rhizosphere	MKKLIVAIATAALGVGTIGVSAVAAVPGTTNRADTYVDIWCDSDATNRDGTGPGSITPGDSGPEGGAEDDVIAKRVDARAIQPEKDPGGKDTATERYNATAGVVQGWFCGEV*
Ga0157380_112312832	3300014326	Switchgrass Rhizosphere	VKKLIVAIAVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTATEHYNANAGVVQGWFCAEL*
Ga0157380_112394011	3300014326	Switchgrass Rhizosphere	MALSVLSVAVATSRIAVSPAAAAAPDTPRANGYVEIWCDSDATNADGTGPGSVTPGIASAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATAQYNAHAGLVQGWFCAEA*
Ga0157380_118921681	3300014326	Switchgrass Rhizosphere	MRKTTIAVVVGALTLGLQLGLAPVALAVPGTTTRADASVEIWCDSDAANLDGTGPASVTPGNSGPEGGAEDDVLAKRVDARAIQPEKDPGGKDTATERYNAHAGVVQGWFCAEV*
Ga0157377_104173611	3300014745	Miscanthus Rhizosphere	MKKTTIAVVVGALTLGLQLGLAPAALAVPGTTTRADASVEIWCDSDAANLDGTGPASVTPGNSAPEGGAEDDVLAKRVDARAIQLEKDPGGKDTATERYNATAGVVQGWFCAEA*
Ga0157379_107251651	3300014968	Switchgrass Rhizosphere	VKKLIVAIAVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTAT
Ga0132258_107985592	3300015371	Arabidopsis Rhizosphere	LLLPGAVVASLVLAAPVGAAAPSTPRADGFIEIWCDSDASNGDGTGPSSITPGEASAEGGVEDDVLAKRVDARAIQPEKSPGGKDTATEQYNEHAGLVQGWFCGELVG*
Ga0132258_134093841	3300015371	Arabidopsis Rhizosphere	PVLAAAPDTPRSDRFIEIWCDSDATNADGTGAGSVTPGDASSERGAEDDVLAKRVDARAVQLDKDPGGKDTATERYNATAGLVQGWFCVELPEGSEP*
Ga0132258_138114492	3300015371	Arabidopsis Rhizosphere	LSVLGAAVTATLIAVSPVAASVPETQNRTDPSIEIWCDTDASNADGSGPASVTPGIATAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATEQYNAHAGLVQGWFCAEVP*
Ga0132256_1010137162	3300015372	Arabidopsis Rhizosphere	LLLPGAVVASLVLAAPVGAAAPSTPRADGFIEIWCDSDASNGDGTGPSSITPGEASAEGGVEDDVLAKRVDARAIQPEKSPGGKDTATERYNEHAGLVQGWFCGELVG*
Ga0132256_1026338681	3300015372	Arabidopsis Rhizosphere	MRRQSLSVLGAAVTATLIAVSPVAASVPETQNRTDPSIEIWCDTDASNADGSGPASVTPGIATAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATDRYNRNAGVIQGWFCAE
Ga0132256_1029327912	3300015372	Arabidopsis Rhizosphere	MRKTTIAVVVGALTVGLQLGLAPAALAVPGTTTRADASVEIWCDSDPNNLDKTGPASVTPGNSGPEGGDEDDVLAKRVDARAIQPEKDPGGKDTATARYNATAGVVQGWFCAEA*
Ga0132257_1016014502	3300015373	Arabidopsis Rhizosphere	MRRQSLSVLGAAVTATLIAVSPVAASVPETQNRTDPSIEIWCDTDASNADGSGPASVTPGIATAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATEQYNAHAGLVQGWFCAEA*
Ga0132257_1021942141	3300015373	Arabidopsis Rhizosphere	LLLPGAVVASLVLAAPVGAAAPSTPRADGFIEIWCDSDASNGDGTGAASITPGEASAEGGVEDDVLAKRVDARAIQPEKSPGGKDTATEQYNEHAGLVQGWFCGELVG*
Ga0132257_1032706201	3300015373	Arabidopsis Rhizosphere	AVVASLLVAAPVGAAAPNTPRGDTYVEIWCDTDPSNGDGTGPGSVTPGVATAEGAAEDDVLAKRVDARAIQPEKTPGGKDTATEQYNAHAGLLQGWFCAEA*
Ga0132255_1008879411	3300015374	Arabidopsis Rhizosphere	PVAESVPETQNRTDPSIEIWCDTDASNADGSGPASVTPGIATAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATEQYNAHAGLVQGWFCAEVP*
Ga0132255_1056604681	3300015374	Arabidopsis Rhizosphere	MRKTTIAVVVGALTVGLQLGLAPAALAVPGTTPRADASVEIWCDSDATNMDGTGPASVTPGNSGPEGGDEDDVLAKRVDARAIQPEKDPGGKDTATARYNATAGVVQGWFCAEA*
Ga0173481_102714602	3300019356	Soil	MKKLAIAIAVSALAVSSPLGASPAAAVPGTTTRADESVDIWCDSDPTNPDGTGPGSITPGNSAHEGGAEDDVLAKRVGARAIQPEKDPGGKDTATARYNATAGVVQGWFCGEA
Ga0173481_103054082	3300019356	Soil	VKKLIVAIAVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCAEL
Ga0173482_102246522	3300019361	Soil	VKKLIVAIAVTALGVGWAGVSLVAAASPTTPRGDTFVEIWCDSNATNFDGTGPGSVTPGNSGPEGGDEDDVLAKRVDARAIQLDKDPGGKDTATERYNENAGIVQGWFCAEQ
Ga0247786_10510681	3300022883	Soil	MNKLVIAIALGGVVVSAPFGASPAAAASTATPRADGYIEIWCDSDATNADGTGSGSVTPGDSAPENGAEDDVLAKRVDARAIQLAKDPGGKDTATERYNLTAGQVQGWFCAEVF
Ga0247791_10479951	3300023062	Soil	MKKLVIAIALGALAMSSPLGVSPAAAVPGTTNRTDAYVDIWCDSDPTNPDGTGPGSITPGNSAHEGGAEDDVLAKRVDARAIQPEKDPGGKDTATARYNATAGVVQGWFCGEA
Ga0210087_10095352	3300025559	Natural And Restored Wetlands	VKKLILAMAAGALSVGTLGVSVAAAVPGTTPRADGFVEIWCDSNATNLDGTGPGSITPGNSDAEGGVEDDVLAKRLDSRAIQPDKDPGGKDTATERFNATAGLVQGWFCDEV
Ga0207688_100197751	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MVAIAVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCAEL
Ga0207659_118289442	3300025926	Miscanthus Rhizosphere	VAVATSLIAVSPVAAAAPDTPRADGYVEIWCDSDATNADGTGPGSVTPGIASAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATAQYNAHAGLVQGWFCAEA
Ga0207706_109543532	3300025933	Corn Rhizosphere	VKKLIVAIAVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVSPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCAEL
Ga0207709_104921781	3300025935	Miscanthus Rhizosphere	MKKLIVAIATAALGVGTIGVSAVAAVPGTTNRADTYVDIWCDSDATNRDGTGPGSITPGDSGPEGGAEDDVLAKRVDARAIQPEKDPGGKDTATERYNATAGVVQGWFCG
Ga0207704_109988142	3300025938	Miscanthus Rhizosphere	MRRMSLSVLGVAVATSLIAGSPVAAAAPDTPRADGYVEIWCDSDATNADGTGPGSVTPGIASAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATAQYNAHAGLVQGWFCAEA
Ga0207668_104138632	3300025972	Switchgrass Rhizosphere	MRRMSLSVLGVAVATSLIAVSPVAAAAPDTPRADGYVEIWCDSDATNADGTGPGSVTPGIASAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATAQYNAHAGLVQGWFCAEA
Ga0208419_10024603	3300026032	Natural And Restored Wetlands	MKKLIIALAVAALGVGSLGVSLAAAVPEITPRADQSVEIWCDSDATNLDGTGPGSITPGDSGPEGGAEDDVLAKRLDARAIQPEKDPGGKDTATDRFNSTAGVVQGWFCGEL
Ga0207708_101356062	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRRMSLSVLGVAVATSLIAVSPVAAAAPDTPRADGYVEIWCDSDATNADGTGPGSVTPGIASAEGGAEDDVLAKRVDARAIQPDKEPGGKDTATEQYNAHAGLVQGWFCAEA
Ga0207708_108383793	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLIVAIATAALGVGTIGVSAVAAVPGTTNRADTYVDIWCDSDATNRDGTGPGSITPGDSGPEGGAEDDVIAKRVDARAIQPEKDPGGKDTATERYNATAGVVQG
Ga0207708_118773392	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTTIAVVVGALTLGLQLGLAPVALAVPGTTTRADASVEIWCDSDAANLDGTGPASVTPGNSAPEGGAEDDVLAKRVDARAIQLEKDPGGKDTATERYNAYAGVVQGWF
Ga0209984_10424691	3300027424	Arabidopsis Thaliana Rhizosphere	GASPAAAVPGTTTRADESVDIWCDSDPTNLDGTGPGSITPGDSAPEGGAEDDVIAKRVDARAIQPEKDPGGKDTATARYNATAGVVQGWFCGEA
Ga0209998_100407892	3300027717	Arabidopsis Thaliana Rhizosphere	MKKLAIAIAVSALAVSSPLGASPAAAVPGTTTRADESVDIWCDSDPTNLDGTGPGSITPGDSAPEGGAEDDVIAKRVDARAIQPEKDPGGKDTATARYNATAGVVQGWFCGEA
Ga0207428_105435582	3300027907	Populus Rhizosphere	MKKLAIAIALAALVGSSPLGASPAAAVPGTTPRADASVEIWCDSVPTNFDGTGPGSITPHDSAPEGGDEDDVLAKRVDARAIQPEKDPGGKDTATARFNATAGLVQGWFCGEA
Ga0247828_101703841	3300028587	Soil	MKKLAIAIAMGALAVSSPLGVSPAAAVPEATSRADGYVDIWCDSNPTNPDGTGPGSITPGDSAAEGGDEDDVIAKRVDARAIQPEKDPGGKDTATERFNATAGVVQGWY
Ga0247818_105275252	3300028589	Soil	MRRMALSVLGVAVATSLIAVSSAAAAAPDTPRADAFVEIWCDTDATNQDRTGPASVTPGDATAEGAEEDDVLAKRVDARAIQPEKDPGGKDTATARYNAHAGVVQGWFCAEA
Ga0247821_112310011	3300028596	Soil	SPLGVSPAAAVPEATSRADGYVDIWCDSNPTNPDGTGPGSITPGDSAAEGGDEDDVIAKRVDARAIQPEKDPGGKDTATERFNATAGVVQGWYCGEA
Ga0307280_103844842	3300028768	Soil	TVSVALLLLVAPASASAAAPDTPRADGFVEIWCDSDATNRDGTGLSSVTPGNATAEGGAEDDVLAKRVDARAIQLDKDPGGKDTATDRYNANAGVVQGWFCAEV
Ga0307282_101294093	3300028784	Soil	MRRFATVSVALLLLLAPASASAAAPDTPRADGYVEIWCDSDATNRDGTGLGSVTPGNATAEGGAEDDVLAKRVDARAIQLDKDPGGKDTATDRYNANAGVVQGWFCAEV
Ga0307503_104676112	3300028802	Soil	VKKVIVAFAASALVLGSAGVSLVAAASETTPRADGYIEIWCDSDPNNGDKTGPGSVTPGNSGPEGGHEDDVLAKRVDVRAIQPDKDPGGKDTATARYNANAGVVQGWFCAEG
Ga0307503_107833071	3300028802	Soil	LATGSAGVSLVAAASGTTPRADGFVEIWCDSVPDNGDHSGPGSVTPGDARREGGQEDDVLAKRVDVRAIQPEKDPGGKDTATARYNANAGVVQGWFCAEF
Ga0247824_109823221	3300028809	Soil	MKKLAIAIAMGALAVSSPFGVSPAAAVPETTSRADGYVDIWCDSNPTNPDGTGPGSITPGDSAAEGGDEDDVIAKRVDARAIQPEKDPGGKDTATERFNATAGVVQGWYCGEA
Ga0247825_113537652	3300028812	Soil	MKKLAIAIAMGALAVSSPLGVSPAAAVPEATSRADGYVDIWCDSNPTNPDGTGPGSITPGDSAAEGGDEDDVIAKRVDARAIQPEKDPGGKDTATERFNATAGVVQGWYCGEA
Ga0247826_107494862	3300030336	Soil	MRRMALSVLGVAVATSLIAVSPAAAAAPDTPRADAFVEIWCDTDATNQDRTGPASVTPGDATAEGAEEDDVLAKRVDARAIQPEKDPGGKDTATARYNTHAGVVQGWFCAEA
Ga0247826_112005092	3300030336	Soil	MKKLAIAIAMGALAVSSPLGVSPAAAVPEATSRADGYVDIWCDSNPTNPDGTGPGSITPGDSAAEGGDEDDVIAKRVDARAIQPEKDPGGKDT
Ga0247826_117777312	3300030336	Soil	MKKLVIAIAMGALALGSPLGAAPAAAVPETTSRADGYVDIWCDSDPTNLDGTGPGSITPGDGAPEGGAEDDVIAKRVDARAIQPEKDPGGKDTATERFNATAG
Ga0310887_111366051	3300031547	Soil	AVSALGVGCAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCAEL
Ga0307413_117427231	3300031824	Rhizosphere	LAVAALGVGSLGVSLAAAVPEITPRADQSVEIWCDSDATNLDGTGPGSITPGDSGPEGGAEDDVLAKRLDARAIQPEKDPGGKDTATDRFNSTAGVVQGWFCGEL
Ga0310904_110670601	3300031854	Soil	MKKLAIAIAMGALAVSSPLGVSPAAAVPEATSRADRYIDIWCDSNPTNPDGTGPGSITPGDSAAEGGDEDDVIAKRVDARAIQPEKDPGGKDTATERFNATAGVVQGWYCGEA
Ga0310892_105180401	3300031858	Soil	MRKTTIAVVVGALTVGLQLGLAPAALAVPGTTTRADASVEIWCDSDPNNLDKTGPASVTPGNSGPEGGAEDDVLAKRVDARAIQPEKDPGGKDTATARYNATAGAVQGWFCAEA
Ga0310906_107858542	3300032013	Soil	SLGVTSAAAVPGSTNRTDPYVDIWCDSNATNDDGTGPGSITPGDSSAEGGAEDDVIAKRVDARAIQPEKDPGGKDTATERYNATAGVVQGWFCGEA
Ga0310906_111331711	3300032013	Soil	IALGALAVSSPLGVSPAAAVPGTTDRTDAYVDIWCDSDPTNPDGTGPGSITPGNSVPEGGAEDDVLAKRVDARAIQPEKDPGGKDTATARYNATAGVVQGWFCGEA
Ga0310890_105070852	3300032075	Soil	MRRMALSVLGVAVATSLIAVSPAAAAAPDTPRADAFVEIWCDTDATNQDRTGPASVTPGDATAEGAEEDDVLAKRVDARAIQPEKDPGGKDTATARYNAHAGVVQGWFCAEA
Ga0310890_115577401	3300032075	Soil	MKKLAIAIAMGALAVSSPLGVSPAAAVPEATSRADGYVDIWCDSNPTNRDGTGPGSITPGNSAPEGGAEDDVLAKRVDARAIQLEKDPGGKDTATERYNATAGVVQGYF
Ga0310889_104473071	3300032179	Soil	LGEPDSTSTGSFGPNRWNRARSAETSADQEGRVVVKKLIVAIAVSALGVAWAGVSLVAAASPTTPRGDTFVEIWCDSNATNLDGTGPGSVTPGNSRPEGGDEDDVLAKRVDARAIQPDKDPGGKDTATERYNANAGVVQGWFCAEL
Ga0247830_104344723	3300033551	Soil	MRRLTVLAPAAIVAAWLLAVSPVAAAAPQTPRHDGYTEIWCDSDALNADGTGAASVTPGDTSAEAGHEDDVLAKRVDDRAVQLDKDPGGKDTATERYNAHAGVVQGWFCAEM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054654

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences