NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F051902

Metagenome / Metatranscriptome Family F051902

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F051902
Family Type Metagenome / Metatranscriptome
Number of Sequences 143
Average Sequence Length 45 residues
Representative Sequence MQNRVLRSIGRFFAGTGDVVGTPSGDARGHIRVYAQKTVTRGRNF
Number of Associated Samples 95
Number of Associated Scaffolds 143

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.62 %
% of genes near scaffold ends (potentially truncated) 23.08 %
% of genes from short scaffolds (< 2000 bps) 72.03 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (83.217 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil
(32.867 % of family members)
Environment Ontology (ENVO) Unclassified
(32.867 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.259 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 23.29%    β-sheet: 0.00%    Coil/Unstructured: 76.71%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 143 Family Scaffolds
PF07883Cupin_2 31.47
PF09989DUF2229 4.20
PF00730HhH-GPD 3.50
PF06445GyrI-like 3.50
PF06050HGD-D 2.10
PF01814Hemerythrin 1.40
PF13458Peripla_BP_6 0.70
PF13466STAS_2 0.70
PF12848ABC_tran_Xtn 0.70
PF04389Peptidase_M28 0.70
PF16326ABC_tran_CTD 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 143 Family Scaffolds
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 3.50
COG0177Endonuclease IIIReplication, recombination and repair [L] 3.50
COG1059Thermostable 8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 3.50
COG1194Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairsReplication, recombination and repair [L] 3.50
COG22313-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamilyReplication, recombination and repair [L] 3.50
COG1775Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdBAmino acid transport and metabolism [E] 2.10

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.22 %
UnclassifiedrootN/A16.78 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908032|Perma_A_C_ConsensusfromContig213734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094815Open in IMG/M
3300000553|TBL_comb47_HYPODRAFT_10103744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941388Open in IMG/M
3300001213|JGIcombinedJ13530_100286979All Organisms → cellular organisms → Bacteria1554Open in IMG/M
3300001213|JGIcombinedJ13530_105765463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094693Open in IMG/M
3300001213|JGIcombinedJ13530_108805828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094506Open in IMG/M
3300001868|JGI24146J20443_1064701All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094667Open in IMG/M
3300001871|JGI24133J20442_1015938Not Available2022Open in IMG/M
3300001871|JGI24133J20442_1027530Not Available1381Open in IMG/M
3300001871|JGI24133J20442_1075214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094613Open in IMG/M
3300002071|JGIcombinedJ21915_10060514Not Available1618Open in IMG/M
3300002072|JGIcombinedJ21914_10168651All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094618Open in IMG/M
3300002538|JGI24132J36420_10013579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0943204Open in IMG/M
3300002538|JGI24132J36420_10021314All Organisms → cellular organisms → Bacteria2418Open in IMG/M
3300002538|JGI24132J36420_10090550Not Available854Open in IMG/M
3300002538|JGI24132J36420_10109211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium746Open in IMG/M
3300002538|JGI24132J36420_10138963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094628Open in IMG/M
3300002538|JGI24132J36420_10188444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094510Open in IMG/M
3300002549|JGI24130J36418_10016490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0942302Open in IMG/M
3300002551|JGI24135J36437_1027160All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094953Open in IMG/M
3300002564|JGI24134J36421_10053503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941115Open in IMG/M
3300002564|JGI24134J36421_10073471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094880Open in IMG/M
3300002569|JGI24136J36422_10161474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094576Open in IMG/M
3300003858|Ga0031656_10072173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941311Open in IMG/M
3300003861|Ga0031654_10078681All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094920Open in IMG/M
3300004481|Ga0069718_10033962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941788Open in IMG/M
3300004776|Ga0007800_10011609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0942191Open in IMG/M
3300005938|Ga0066795_10012474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0942329Open in IMG/M
3300005947|Ga0066794_10021054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941891Open in IMG/M
3300006055|Ga0097691_1052318All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941407Open in IMG/M
3300006102|Ga0075015_100552704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094669Open in IMG/M
3300006636|Ga0075525_10085440All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094604Open in IMG/M
3300006640|Ga0075527_10017913Not Available1838Open in IMG/M
3300006642|Ga0075521_10089684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941399Open in IMG/M
3300006949|Ga0075528_10016365All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941824Open in IMG/M
3300009029|Ga0066793_10842322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium520Open in IMG/M
3300009120|Ga0117941_1198747All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094549Open in IMG/M
3300009175|Ga0073936_10017321All Organisms → cellular organisms → Bacteria8120Open in IMG/M
3300009175|Ga0073936_10229950All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941275Open in IMG/M
3300009175|Ga0073936_10234047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941258Open in IMG/M
3300009175|Ga0073936_10818381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094502Open in IMG/M
3300009502|Ga0114951_10000258All Organisms → cellular organisms → Bacteria77967Open in IMG/M
3300009502|Ga0114951_10227244Not Available987Open in IMG/M
3300011997|Ga0120162_1051376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094996Open in IMG/M
(restricted) 3300013137|Ga0172375_10569798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium739Open in IMG/M
3300014490|Ga0182010_10215851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941010Open in IMG/M
3300014498|Ga0182019_10282943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941101Open in IMG/M
3300014502|Ga0182021_11963240All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094704Open in IMG/M
3300020163|Ga0194039_1019576All Organisms → cellular organisms → Bacteria2715Open in IMG/M
3300020163|Ga0194039_1044525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941671Open in IMG/M
3300020163|Ga0194039_1056708Not Available1446Open in IMG/M
3300020163|Ga0194039_1082860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941153Open in IMG/M
3300020163|Ga0194039_1142552All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094831Open in IMG/M
3300020163|Ga0194039_1149612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094807Open in IMG/M
3300020228|Ga0194040_1051645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941183Open in IMG/M
3300020228|Ga0194040_1135545All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300020228|Ga0194040_1256840Not Available516Open in IMG/M
3300020690|Ga0214223_1013913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094705Open in IMG/M
3300021070|Ga0194056_10000919All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria16144Open in IMG/M
3300021070|Ga0194056_10243060Not Available617Open in IMG/M
3300021071|Ga0194058_10011275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0943507Open in IMG/M
3300021072|Ga0194057_10144003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094853Open in IMG/M
3300021075|Ga0194063_10112725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941193Open in IMG/M
3300021075|Ga0194063_10320767All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094596Open in IMG/M
3300021349|Ga0194052_1206442All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300021473|Ga0194043_1022906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2743Open in IMG/M
3300021520|Ga0194053_10037334All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0942189Open in IMG/M
3300021605|Ga0194054_10130317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094861Open in IMG/M
3300022555|Ga0212088_10031869All Organisms → cellular organisms → Bacteria6349Open in IMG/M
3300025316|Ga0209697_10393317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094675Open in IMG/M
3300025461|Ga0208851_1003339All Organisms → cellular organisms → Bacteria4348Open in IMG/M
3300025481|Ga0208079_1003247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7540Open in IMG/M
3300025484|Ga0208587_1102893All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094553Open in IMG/M
3300025524|Ga0209817_1089608Not Available515Open in IMG/M
3300025533|Ga0208584_1012199All Organisms → cellular organisms → Bacteria2295Open in IMG/M
3300025548|Ga0208716_1089809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094615Open in IMG/M
3300025575|Ga0209430_1002300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria12487Open in IMG/M
3300025575|Ga0209430_1002717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria11050Open in IMG/M
3300025582|Ga0209386_1001876All Organisms → cellular organisms → Bacteria7369Open in IMG/M
3300025650|Ga0209385_1006857All Organisms → cellular organisms → Bacteria4815Open in IMG/M
3300025692|Ga0209744_1084356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941118Open in IMG/M
3300025692|Ga0209744_1140318All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094790Open in IMG/M
3300025692|Ga0209744_1182144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094654Open in IMG/M
3300025716|Ga0209746_1161371All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094624Open in IMG/M
3300025725|Ga0209638_1138506Not Available801Open in IMG/M
3300025750|Ga0209747_1077274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941171Open in IMG/M
3300025764|Ga0209539_1160860Not Available859Open in IMG/M
3300025846|Ga0209538_1057990All Organisms → cellular organisms → Bacteria1640Open in IMG/M
3300025852|Ga0209124_10396194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300025857|Ga0209014_10076419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1370Open in IMG/M
3300025865|Ga0209226_10009019All Organisms → cellular organisms → Bacteria4266Open in IMG/M
3300025865|Ga0209226_10338115All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094624Open in IMG/M
3300025865|Ga0209226_10442583All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094518Open in IMG/M
3300025888|Ga0209540_10688414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094500Open in IMG/M
3300027885|Ga0209450_10496931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094893Open in IMG/M
3300027894|Ga0209068_10459181Not Available731Open in IMG/M
3300027896|Ga0209777_10475143All Organisms → cellular organisms → Bacteria926Open in IMG/M
3300027897|Ga0209254_10006238All Organisms → cellular organisms → Bacteria10994Open in IMG/M
3300027897|Ga0209254_11102584Not Available507Open in IMG/M
3300027899|Ga0209668_10114356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941589Open in IMG/M
3300027900|Ga0209253_10096437All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0942425Open in IMG/M
3300027902|Ga0209048_10029985All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0944620Open in IMG/M
3300027902|Ga0209048_10066992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0942861Open in IMG/M
3300027902|Ga0209048_10743127Not Available643Open in IMG/M
3300028032|Ga0265296_1007392All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8242Open in IMG/M
3300029288|Ga0265297_10046893All Organisms → cellular organisms → Bacteria3873Open in IMG/M
3300029990|Ga0311336_10031407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4086Open in IMG/M
3300029990|Ga0311336_10628024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094918Open in IMG/M
3300030010|Ga0302299_10276018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094880Open in IMG/M
3300030114|Ga0311333_10036258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0943473Open in IMG/M
3300030114|Ga0311333_11637364All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094557Open in IMG/M
3300031232|Ga0302323_100697398All Organisms → cellular organisms → Bacteria1109Open in IMG/M
3300031726|Ga0302321_102033396Not Available667Open in IMG/M
3300031746|Ga0315293_10083144Not Available2735Open in IMG/M
3300031772|Ga0315288_10046616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0945187Open in IMG/M
3300031834|Ga0315290_10009084All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7373Open in IMG/M
3300031834|Ga0315290_10065158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0942997Open in IMG/M
3300031834|Ga0315290_10067230All Organisms → cellular organisms → Bacteria2953Open in IMG/M
3300031834|Ga0315290_11043017All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300031873|Ga0315297_10002660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria11303Open in IMG/M
3300031873|Ga0315297_11252546Not Available606Open in IMG/M
3300031902|Ga0302322_101444300All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium SG8_35_2839Open in IMG/M
3300031949|Ga0214473_11250674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094765Open in IMG/M
3300031997|Ga0315278_10106531All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2830Open in IMG/M
3300031997|Ga0315278_10183107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0942151Open in IMG/M
3300031997|Ga0315278_10587795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941140Open in IMG/M
3300031997|Ga0315278_10615686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941110Open in IMG/M
3300031997|Ga0315278_11278224All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300031997|Ga0315278_11540461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094638Open in IMG/M
3300031997|Ga0315278_11972153Not Available546Open in IMG/M
3300032156|Ga0315295_10363566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941470Open in IMG/M
3300032163|Ga0315281_10405255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941468Open in IMG/M
3300032173|Ga0315268_10705786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0941006Open in IMG/M
3300032173|Ga0315268_11658212All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300032177|Ga0315276_11464933Not Available711Open in IMG/M
3300032342|Ga0315286_11675912Not Available602Open in IMG/M
3300032397|Ga0315287_10210129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA0942274Open in IMG/M
3300032397|Ga0315287_11653439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094718Open in IMG/M
3300032397|Ga0315287_12026253Not Available633Open in IMG/M
3300032397|Ga0315287_12479477All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094557Open in IMG/M
3300033408|Ga0316605_11090677All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094769Open in IMG/M
3300034652|Ga0316598_108537All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300034652|Ga0316598_219593Not Available540Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil32.87%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment17.48%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater13.29%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment7.69%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen5.59%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion4.20%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland2.10%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen2.10%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater1.40%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.40%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.40%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.40%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.40%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.70%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.70%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.70%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.70%
Lake SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment0.70%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.70%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.70%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.70%
Landfill LeachateEngineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate0.70%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908032Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_allEnvironmentalOpen in IMG/M
3300000553Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)EnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300001868Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-31AEnvironmentalOpen in IMG/M
3300001871Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311EnvironmentalOpen in IMG/M
3300002071Barrow Graham LP Ref core NGADG0011-312 (Barrow Graham LP Ref core NGADG0011-312,NGADG0011-212, ASSEMBLY_DATE=20131010)EnvironmentalOpen in IMG/M
3300002072Barrow Graham LP Ref core NGADG0011-211 (Barrow Graham LP Ref core NGADG0011-211,NGADG0004-312, ASSEMBLY_DATE=20131005)EnvironmentalOpen in IMG/M
3300002538Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212EnvironmentalOpen in IMG/M
3300002549Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212EnvironmentalOpen in IMG/M
3300002551Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211EnvironmentalOpen in IMG/M
3300002564Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312EnvironmentalOpen in IMG/M
3300002569Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212EnvironmentalOpen in IMG/M
3300003858Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DIEnvironmentalOpen in IMG/M
3300003861Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CREnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300004776Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14MEnvironmentalOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300005947Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006636Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-twoEnvironmentalOpen in IMG/M
3300006640Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11BEnvironmentalOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300006949Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16BEnvironmentalOpen in IMG/M
3300006972Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB136-AEnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009120Lake sediment microbial communities from Tanners Lake, St. Paul, MNEnvironmentalOpen in IMG/M
3300009175Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaGEnvironmentalOpen in IMG/M
3300009502Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaGEnvironmentalOpen in IMG/M
3300011997Permafrost microbial communities from Nunavut, Canada - A15_80cm_18MEnvironmentalOpen in IMG/M
3300013137 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1mEnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020163Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8mEnvironmentalOpen in IMG/M
3300020228Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-10mEnvironmentalOpen in IMG/M
3300020690Freshwater microbial communities from Trout Bog Lake, WI - 27AUG2007 hypolimnionEnvironmentalOpen in IMG/M
3300021070Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-13mEnvironmentalOpen in IMG/M
3300021071Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-17mEnvironmentalOpen in IMG/M
3300021072Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-15mEnvironmentalOpen in IMG/M
3300021075Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L373-20mEnvironmentalOpen in IMG/M
3300021349Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-6mEnvironmentalOpen in IMG/M
3300021473Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-15mEnvironmentalOpen in IMG/M
3300021520Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-8mEnvironmentalOpen in IMG/M
3300021605Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-10mEnvironmentalOpen in IMG/M
3300022555Alinen_combined assemblyEnvironmentalOpen in IMG/M
3300025316Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025461Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025481Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025484Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025524Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB136-A (SPAdes)EnvironmentalOpen in IMG/M
3300025533Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025548Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025575Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-33A (SPAdes)EnvironmentalOpen in IMG/M
3300025582Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two (SPAdes)EnvironmentalOpen in IMG/M
3300025650Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)EnvironmentalOpen in IMG/M
3300025692Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)EnvironmentalOpen in IMG/M
3300025716Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)EnvironmentalOpen in IMG/M
3300025725Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)EnvironmentalOpen in IMG/M
3300025750Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)EnvironmentalOpen in IMG/M
3300025764Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312 (SPAdes)EnvironmentalOpen in IMG/M
3300025846Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)EnvironmentalOpen in IMG/M
3300025852Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)EnvironmentalOpen in IMG/M
3300025857Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)EnvironmentalOpen in IMG/M
3300025865Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)EnvironmentalOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300027897Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300028032Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #1EnvironmentalOpen in IMG/M
3300029288Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91EngineeredOpen in IMG/M
3300029990I_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300030010Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4EnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300034652Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_02R_16 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Perma_A_C_031180202124908032SoilAMQNRVFRSIGRFFAGTGDVIGTPSGDARGHLRVYAQKTVTRGRNF
TBL_comb47_HYPODRAFT_1010374443300000553FreshwaterMQNRVFRSIGRFFAGTGDVVGTPSGDARGLVRVYINDADNVSRGRSF*
JGIcombinedJ13530_10028697943300001213WetlandMQNRVLRSIGRFFAGTGEIVATPSGDARGHMRVYVQDPVTRG
JGIcombinedJ13530_10576546333300001213WetlandMQNRILRSIGRFFAGTGAVVGTPSGDARGLIRIYTRETVTRGRSF*
JGIcombinedJ13530_10880582823300001213WetlandMGTMKQRILRSIGRFFEGTGDVLGTPSGDARGLIRVYTNETVTRGRSF*
JGI24146J20443_106470123300001868Arctic Peat SoilMTNRVFRMISRFFEGTGTSVSTPSGDARGHVRPYEAKTLTRGR
JGI24133J20442_101593833300001871Arctic Peat SoilMISRFFEGTGTSVSTPSGDARGHVRPYEAKTLTRGRNL*
JGI24133J20442_102753023300001871Arctic Peat SoilMQNRVFRSIGRFFAGTGXVIGTPSGDARGHLRVXAQKTVTRGRNF*
JGI24133J20442_107521413300001871Arctic Peat SoilMISRFLEGTGTSVSTPSGDARGHVRTYGAKTLTRGRNI*
JGIcombinedJ21915_1006051413300002071Arctic Peat SoilMRVRFLPTLKRFFEGTASVVATPSGDARGHIRVYTQETVTRGRNF*
JGIcombinedJ21914_1016865123300002072Arctic Peat SoilMQNRVFRSIGRFFAGTGHVIGTPSGDARGHLRVYAQETVTRGRNF*
JGI24132J36420_1001357933300002538Arctic Peat SoilMTNRVFRMINRFFEGTGASVSTPSGDARGHLRPYALKTLTGGRNL*
JGI24132J36420_1002131413300002538Arctic Peat SoilMTNRVFRMISRFFEGTGTSVSTPSGDARGHVRPYEAKTLTRGRNL*
JGI24132J36420_1009055023300002538Arctic Peat SoilMQNRVLRSIGRFFKGTGDVIGTPSGDARGHLRVYAQKTVTRGRNF*
JGI24132J36420_1010921123300002538Arctic Peat SoilMQNRVLRSIGRFFAGTGDIVGTPSGDARGHLRVYAQKTVTRGRNF*
JGI24132J36420_1013896313300002538Arctic Peat SoilMQNRVLRSIGRFFAGTGDVVGTPSGDARGHLRVYAQKTVTRSRSF*
JGI24132J36420_1018844413300002538Arctic Peat SoilMQNRVLRSIGRFFEGTGAVIGTPSGDARGHLRVYAQKIVTRSRNF*
JGI24130J36418_1001649023300002549Arctic Peat SoilMQNRVFRSIGRFFAGTGHVIGTPSGDARGHLRVYAQKTVTRGRNF*
JGI24135J36437_102716023300002551Arctic Peat SoilMQNRXLRSIGRFFAGTGDIVGTPSGDARGHLRVYAQKTVTRGRNF*
JGI24134J36421_1005350333300002564Arctic Peat SoilMQNRVFRSIGRFFAGTGXVIGTPSGDARGHLRVXAQXTVTRGRNF*
JGI24134J36421_1007347133300002564Arctic Peat SoilMQNRILRSIGRFFAGAGDVIGTPSGDARGHLRVYAQKTVTRGRNF*
JGI24136J36422_1016147423300002569Arctic Peat SoilMQNRVLRSIGRFFEGTGDVVGTPSGDTRGLIRVYTQDTVTRGRNF*
Ga0031656_1007217343300003858Freshwater Lake SedimentMQNRVVRSIGRFFEGTGDVVGTPSGDARGHIRIYTQETVTRGRSF*
Ga0031654_1007868133300003861Freshwater Lake SedimentMQNXVFRSIRRFFAGAGDVLATPSGDARGHVRVYVQETVTRGCDLQSK*
Ga0069718_1003396223300004481SedimentMQNRVIRSIGRFFEGTGDVVGTPSGDARGHIRIYTQETVKRGRGF*
Ga0007800_1001160953300004776FreshwaterMQNRVFRTIGRFFEGTGDVIGTPSGDARGHIRVYTQETVTRGR
Ga0066795_1001247423300005938SoilMQNRVFRSIGRFFAGTGDIVGTPSGDARGHLRVYAQKTVTRGRNF*
Ga0066794_1002105453300005947SoilMQNRVFRSIGRFFAGTGDVIGTPSGDARGHLRVYAQKTVTRGRNF*
Ga0097691_105231823300006055Arctic Peat SoilMQNRALRSIGRFFAGTGDIVGTPSGDARGHLRVYAQKTVTRGRNF*
Ga0075015_10055270433300006102WatershedsMQNRVFRSIGRFFAGTGDVIGTPSGDARGLVRVYV
Ga0075525_1008544013300006636Arctic Peat SoilMQNRVLRSISRFFEGTGDVIGTPSGDARGHLRVYAQKIVTRGRNF*
Ga0075527_1001791323300006640Arctic Peat SoilMQNRVFRSIGRFFAGIGDVIGTPSGDARGHLRVYAQKTVTRGRNF*
Ga0075521_1008968443300006642Arctic Peat SoilMQNKVLRSIGRFFAGTGDVVGTPSGDARGLVRVYVKDADTVTRGRSF*
Ga0075528_1001636523300006949Arctic Peat SoilMQNRVLRSISRFFEGTGDVIGTPSGDARGHLHVYAQKIVTRGRNF*
Ga0075518_106287713300006972Arctic Peat SoilFFEGTGTSVSTPSGDARGHVRPYEAKTLTRGRNL*
Ga0066793_1084232223300009029Prmafrost SoilVLRSIGRFFAGTGDIVGTPSGDARGHLRVYAQKTVTRGRNF*
Ga0117941_119874713300009120Lake SedimentMQNRLFRSIGRFFEGTGSVLGSPSGDARGLVRVYADQDNETVKVGRSF*
Ga0073936_1001732153300009175Freshwater Lake HypolimnionMQNRVLRSIGRFFAGTGDVVGTPSGDARGLVRVYISDADTVSRGRSF*
Ga0073936_1022995023300009175Freshwater Lake HypolimnionMQNRILRSIGRFFAGTGDVVGTPSGDARGLVRVYVKDADTVTRGRSF*
Ga0073936_1023404733300009175Freshwater Lake HypolimnionMQNRILRSIGRFFAGTGDVVGTPSGDARGLVRVYVKDSDTVTRGRSF*
Ga0073936_1081838113300009175Freshwater Lake HypolimnionMQNRVFRSIGRFFAGTGDVVGTPSGDARGLVRVYASDTDTVTRGRSFSGRPESPADA
Ga0114951_10000258133300009502FreshwaterMQNRVFRTIGRFFEGTGDVIGTPSGDARGHIRVYTQETVTRGRNF*
Ga0114951_1022724413300009502FreshwaterMRTHVFRSIGRFFAGTGDVLATPSGDARGHVRVYTNTTVTRGRDF*
Ga0120162_105137613300011997PermafrostMQNRLFRSIGRFFAGTGDVVGTPSGDARGHIRVYTQETVTRGRNF*
(restricted) Ga0172375_1056979823300013137FreshwaterVVGIMQNRFFRSIGRFFEGTGDVIGTPSGDARGHVRAYPTQRDKA*
Ga0182010_1021585123300014490FenMTNRVFRMINRFFEGTGASVSTPSGDARGHLRPYPLKTATKSRNL*
Ga0182019_1028294323300014498FenMQNKILRSISRFFAGTGDVVGTPSGDARGLVRVYVNDADTVTRGRSF*
Ga0182021_1196324013300014502FenMQSKVLRSIGRFFAGTGDVVGTPSGDARGLVRVYVHDA
Ga0194039_101957633300020163Anoxic Zone FreshwaterMQNRILRSIGRFFAGTGDVVGTPSGDARGLVRVYVKDADTVTRGRSF
Ga0194039_104452553300020163Anoxic Zone FreshwaterMQNRVLRSIGRFFAGTGDVVGTPSGDARGHIRVYAQQTVTRGRNF
Ga0194039_105670833300020163Anoxic Zone FreshwaterMRTHVFRSIGKFFAGTGDVLATPSGDARGHVRVYTTTTVTRGRDF
Ga0194039_108286023300020163Anoxic Zone FreshwaterMQNRVFRSIGRFFEGTGDVVGTPSGDARGLIRVYTQDTVTRGRSF
Ga0194039_114255233300020163Anoxic Zone FreshwaterMRTHVFRSIGTFFAGTGDVLATPSGDARGHVRVYTNTTVTRGRDF
Ga0194039_114961213300020163Anoxic Zone FreshwaterMQNRVLRSIGRFFAGTGDVVGTPSGDARGLVRVYISDADTVSRGRSF
Ga0194040_105164543300020228Anoxic Zone FreshwaterMQNRVFRTIGRFFEGTGDVIGTPSGDARGHIRVYTQETV
Ga0194040_113554513300020228Anoxic Zone FreshwaterLQNRVLRSIGRFFAGTGDVVGTPSGDARGHIRVYAQKTVTRGRNF
Ga0194040_125684013300020228Anoxic Zone FreshwaterMRTHVFRSIGKFFAGTGDVLATPSGDARGHVRVYTNTTVTRGRDF
Ga0214223_101391323300020690FreshwaterMQNRVFRSIGRFFAGTGDVVGTPSGDARGLVRVYINDADNVSRGRSF
Ga0194056_10000919113300021070Anoxic Zone FreshwaterMQNRVLRSIGRFFAGTGDVVGTPSGDARGHIRVYAQKTVTRGRNF
Ga0194056_1024306013300021070Anoxic Zone FreshwaterMNTNVFRSIGRFFAGTGAVIATPSGDTRGHIRVYTQETVTRGRNF
Ga0194058_1001127533300021071Anoxic Zone FreshwaterMQNRVLRSIGRFFAGTGDVIGTPSGDARGHIRVYAQKTVTRGRNF
Ga0194057_1014400313300021072Anoxic Zone FreshwaterMSTNVFRSIGRFFAGTGAVIATPSGDTRGHIRVYTQETVTRGRNF
Ga0194063_1011272543300021075Anoxic Zone FreshwaterMQNRVFRSIGRFFAGTGDVIGTPSGDARGHIRVYAQKTVTRGRNF
Ga0194063_1032076733300021075Anoxic Zone FreshwaterMQNRVLRSISRFFAGTGDVVGTPSGDARGHIRVYAQKTVTRGRNF
Ga0194052_120644213300021349Anoxic Zone FreshwaterLVRKAVALMQNRVLRSISRFFSGTGEVVGTPSGDARGLIRVYADDNDTVTRGRSF
Ga0194043_102290653300021473Anoxic Zone FreshwaterMQHPVFRSIGRFFAGTGDVFGTPSGDARGHIRVYAQKTVTRGRNF
Ga0194053_1003733443300021520Anoxic Zone FreshwaterMQNRVFRTIGRFFEGTGDVIGTPSGDARGHIRVYTQETVTRGRNF
Ga0194054_1013031733300021605Anoxic Zone FreshwaterMQNRVLRSIGRFFAGTGDVVGTPSGDARGLVRVYI
Ga0212088_1003186913300022555Freshwater Lake HypolimnionRFFAGTGDVVGTPSGDARGLVRVYISDADTVSRGRSF
Ga0209697_1039331723300025316Freshwater Lake HypolimnionMQNRILRSIGRFFAGTGDVVGTPSGDARGLVRVYVKDSDTVTRGRSF
Ga0208851_100333943300025461Arctic Peat SoilMQNRLLRSIGRFFEGTGSVLGSPSGDARGLVRVYADQDNETVKVGRAF
Ga0208079_100324763300025481Arctic Peat SoilMQNRVFRSIGRFFAGTGHVIGTPSGDARGHLRVYAQKTVTRGRNF
Ga0208587_110289313300025484Arctic Peat SoilMQNRALRSIGRFFAGTGDIVGTPSGDARGHLRVYAQKTVTRGRNF
Ga0209817_108960813300025524Arctic Peat SoilLNGEAVGTMQNRVLRSIGRFFAGTGDVVGTPSGDARGHLRVYAQKTVTRGRNF
Ga0208584_101219913300025533Arctic Peat SoilMRVRFLPTLKRFFEGTASVVATPSGDARGHIRVYTQETVTRGRNF
Ga0208716_108980923300025548Arctic Peat SoilMQNRVLRSIGRFFAGTGDIVGTPSGDARGHLRVYAQKTVTRGRNF
Ga0209430_100230053300025575Arctic Peat SoilMTNRVFRMISRFFEGTGTSVSTPSGDARGHVRPYEAKTLTRGRNL
Ga0209430_100271763300025575Arctic Peat SoilMQNRVFRSIGRFFAGTGDVIGTPSGDARGHLRVYAQKTVTRGRNF
Ga0209386_100187643300025582Arctic Peat SoilMQNRVLRSISRFFEGTGDVIGTPSGDARGHLRVYAQKIVTRGRNF
Ga0209385_100685753300025650Arctic Peat SoilMQNKVLRSIGRFFAGTGDVVGTPSGDARGLVRVYVKDADTVTRGRSF
Ga0209744_108435613300025692Arctic Peat SoilMQIRVLRSIGRFLEGTGDVVGTPSGDTRGLIRVYTQDTVTRGRNF
Ga0209744_114031823300025692Arctic Peat SoilMQNRVFRSIGRFFAGTGHVIGTPSGDARGHLRVYAQETVTRGRNF
Ga0209744_118214413300025692Arctic Peat SoilMQNRVLRSIGRFFAGTGDVVGTPSGDARGHLRVYAQKTVTRSRSF
Ga0209746_116137133300025716Arctic Peat SoilMQNRVFRSIGRFFAGTGDVIGTPSGDARGHLRVYAQKTVTRGSNF
Ga0209638_113850623300025725Arctic Peat SoilMQNRVLRSIGRFFKGTGDVIGTPSGDARGHLRVYAQKTVTRGRNF
Ga0209747_107727443300025750Arctic Peat SoilMQNKVLRSIGRFFAGTGDVVGTPSGDARGLVRVYVNDADTVTRGRSF
Ga0209539_116086013300025764Arctic Peat SoilNRVFRMINRFFEGTGASVSTPSGDARGHLRPYPLKTATKSRNL
Ga0209538_105799033300025846Arctic Peat SoilMTNRVFRMINRFFEGTGASVSTPSGDARGHLRPYALKTLTGGRNL
Ga0209124_1039619423300025852Arctic Peat SoilRFFAGTGDIVGTPSGDARGHLRVYAQKTVTRGRNF
Ga0209014_1007641933300025857Arctic Peat SoilMQNRLLRSIGRFFEGTGDVVGTPSGDARGHIRVYTEETVTRGRNF
Ga0209226_1000901923300025865Arctic Peat SoilMQNRVLRSIGRFFEGTGDVVGTPSGDTRGLIRVYTQDTVTRGRNF
Ga0209226_1033811513300025865Arctic Peat SoilMQNRVFRSIGRFFAGTGEVIGTPSGDARGHVRLYVKDAGTVTRG
Ga0209226_1044258323300025865Arctic Peat SoilMQNRVFRLIGRFFEGTGDVIGTPSGDARGHIRVYTQETVTRGRNF
Ga0209540_1068841413300025888Arctic Peat SoilMQNKVLRSIGRFFAGTGDVVETPSGDARGLVRVYVKDADTVTRGRSF
Ga0209450_1049693113300027885Freshwater Lake SedimentMKNRVFRSIGRFFEGTGDVLSTPSGDARGHMRVYTQEIVTRG
Ga0209068_1045918133300027894WatershedsMQNRIFRSIGRFFAGTGDVVGTPSGDARGLVRVYVKESDDTVTRGRSF
Ga0209777_1047514313300027896Freshwater Lake SedimentRVFRSIGRFFAGTGEVLGTPSGDARGLVRVYVNEAEGTVTRGRSF
Ga0209254_10006238123300027897Freshwater Lake SedimentMQNRVVRSIGRFFEGTGDVVGTPSGDARGHIRIYTQETVTRGRSF
Ga0209254_1110258413300027897Freshwater Lake SedimentMKNRVVSSIGRFFEGTGDVVGTPSGDARGHIRVYTQETVTRGRNF
Ga0209668_1011435643300027899Freshwater Lake SedimentMQNRVFRSIGRFFEGTGDVVGTPSGDARGHIRIYTHGTVTRGRSF
Ga0209253_1009643743300027900Freshwater Lake SedimentMTNRVFRSIGRFFEGTGDVVGTPSGDARGHIRIYTQETVKRGRGF
Ga0209048_1002998523300027902Freshwater Lake SedimentMQNQVFRSIRRFFAGAGDVLATPSGDARGHVRVYVQETVTRGCDLQSK
Ga0209048_1006699223300027902Freshwater Lake SedimentMQNQVLRSLGRFFAGTGDIIGTPSGDARGHIRVYAQETVTRGRSF
Ga0209048_1074312723300027902Freshwater Lake SedimentMQNRVFRSIGRFFEGTGDVVGTPSGDARGHIRVYAQETVTRGRNF
Ga0265296_100739253300028032GroundwaterMQTDFLRTLGRFFAEAGAAISTPSGDARGHIRVYAGENQIVTRGRNF
Ga0265297_1004689343300029288Landfill LeachateMQNRILRSIGRFFAGTGDVVATPSGDARGHIRVYAQKTVTRGRNF
Ga0311336_1003140713300029990FenMTNRVFRMINRFFEGTGASVSTPSGDARGHLRPYPLK
Ga0311336_1062802433300029990FenEAAGTMQNKVLRSIGRFFAGTGDVVGTPSGDARGLVRVYVNDTDDTVTRGRSF
Ga0302299_1027601823300030010FenMQSKVLRSIGRFFAGTGDVVGTPSGDARGLVRVYVNDADDTVTRGRSF
Ga0311333_1003625843300030114FenMTNRVFRMINRFFEGTGASVSTPSGDARGHLRPYPLKTATKSRNL
Ga0311333_1163736413300030114FenMQSKVLRSIGRFFAGTGDVVGTPSGDARGLVRVYVHDADDTVTRGRSF
Ga0302323_10069739813300031232FenLSSFITREGRMTNRFSRMIKRFFEGTGDVVSTPSGDARGHIRVYANKTVTRGRNF
Ga0302321_10203339613300031726FenLHKLSSFITREGRMTNRFSRMIKRFFEGTGDVVSTPSGDARGHIRVYANKTVTRGRNF
Ga0315293_1008314473300031746SedimentLNRETVSIMQNRVFRSISRFFEGTGGVVGTPSGDARGHIRVYTHDTVTRGRNF
Ga0315288_1004661653300031772SedimentMQNRVFRSISRFFEGTGGVVGTPSGDARGHIRVYTHDTVTRGRNF
Ga0315290_1000908463300031834SedimentMQNRVFRSISRFFEGTGGVVGTPSGDARGHIRVYTRDTVTRGRNF
Ga0315290_1006515843300031834SedimentMQNRLFRSIGRFFEGTGDVVGTPSGDARGHIRVYAHETVTRGRNF
Ga0315290_1006723033300031834SedimentMQNGVLRSIGRFFAGAGDVLGTPSGDARGHIRVYTHESVTRGRSF
Ga0315290_1104301713300031834SedimentMQNGLLRSIGRFFAGTGDVLGTPSGDARGHIRVYTQETVTRGRNF
Ga0315297_10002660153300031873SedimentMRNRVVRSISRFFEGTGGVVGTPSGDARGLIRVYTHDTVTRGRKF
Ga0315297_1125254623300031873SedimentMQNRVVRSISRFFEGTGGVVGTPSGDARGLIRIYTHDTVTRGRNF
Ga0302322_10144430033300031902FenFSRMIKRFFEGTGDVVSTPSGDARGHIRVYANKTVTRGRNF
Ga0214473_1125067413300031949SoilMGTMQNRVLRAIGRFFAGTGDVVATPSGDARGHIRVYAQKTVTRGRNF
Ga0315278_1010653163300031997SedimentMQNRVIRSISRFFEGTGGVVGTPSGDARGLIRIYTHDTVTRGRNF
Ga0315278_1018310753300031997SedimentMQNGVLRSIGRFFAGAGDVLGTPSGDARGHIRVYTH
Ga0315278_1058779543300031997SedimentMQNGLLRSIGRFFAGTGDVLGTPSGDARGHIRVYTQETVT
Ga0315278_1061568643300031997SedimentMQNRMLRSIGRFFAGTGDVVATPSGDARGHIRVYAQKTVTRGRNF
Ga0315278_1127822413300031997SedimentLRSIGRFFAGTGDVVATPSGDARGHIRVYAQKTVTRGRNF
Ga0315278_1154046123300031997SedimentMKNRVFRSIGRFFEGTGDVVGTPSGDARGHIRVYTQETVTRGRSF
Ga0315278_1197215313300031997SedimentSRETVSIMQNRVLRAISRFFEGTGGVVGTPSGDARGHIRVYTHDTVTRGRNF
Ga0315295_1036356623300032156SedimentMQNRVLRSIGRFFAGTGDVVGTPSGDARGHLRVYAQKTVTRGRNF
Ga0315281_1040525523300032163SedimentMHNRVFRSLGRFFAGTGDVVGTPSGDARGHIRLYAQKTVTRGRNF
Ga0315268_1070578613300032173SedimentMQNRIFRSIGRFFEGIGDVVASPSGDARGLIRVYTNETVTRGRDF
Ga0315268_1165821213300032173SedimentMQNGVLRSIGRFFAGTGDVIGTPSGDARGHIRVYTQEIVTRGRNF
Ga0315276_1146493323300032177SedimentMQNRVVRSISRFFEGTGGVVGTPSGDARGHIRVYTHDTVTRGRNF
Ga0315286_1167591223300032342SedimentMHNRVFRSLDRFFAGTGDVVGTPSGDARGHIRLYAQKTVTRGRNF
Ga0315287_1021012913300032397SedimentMQNRILRSIGRFFAGTGDVVGTPSGDARGHIRVYAQKTVTRGRNF
Ga0315287_1165343933300032397SedimentMQNRLLRSIGRFFAGTGDVFGTPSGDARGHIRVYTQETVTRGRSF
Ga0315287_1202625333300032397SedimentMQNRVFRSIGRFFEGIGDVVASPSGDARGLIRVYTNETVTRGRDF
Ga0315287_1247947713300032397SedimentMRNRVLRSISRFFEGTGGVLGTPSGDARGHIRVYTQDPVTR
Ga0316605_1109067713300033408SoilMRGNLLRSLGKFFAGTGDVIGTPSGDARGHLRVYAHHSTVTSGRNF
Ga0316598_108537_209_3523300034652Untreated Peat SoilMQNRVLRSLSRFFSGTGEVVGTPSGDARGLIRVYTDENDTVTRGRSF
Ga0316598_219593_400_5163300034652Untreated Peat SoilMIKRFFEGTGDVVSTPSGDARGHVRVYAGETVTRGRNF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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