Metagenome / Metatranscriptome Family F051527

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051527
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	43 residues
Representative Sequence	MRSQIEFALAHPVFDPERQIVTGHYWRAGDTVSACLTVNIGME
Number of Associated Samples	112
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.11 %
% of genes near scaffold ends (potentially truncated)	14.58 %
% of genes from short scaffolds (< 2000 bps)	68.06 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.583 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.306 % of family members)
Environment Ontology (ENVO)	Unclassified (25.694 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.611 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.54% β-sheet: 11.27% Coil/Unstructured: 66.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF05565	Sipho_Gp157	2.78
PF00589	Phage_integrase	2.78
PF03837	RecT	2.78
PF00486	Trans_reg_C	2.08
PF11752	DUF3309	1.39
PF03237	Terminase_6N	1.39
PF07750	GcrA	1.39
PF12728	HTH_17	1.39
PF05930	Phage_AlpA	1.39
PF05063	MT-A70	1.39
PF13481	AAA_25	0.69
PF13662	Toprim_4	0.69
PF01555	N6_N4_Mtase	0.69
PF05521	Phage_H_T_join	0.69
PF13392	HNH_3	0.69
PF08751	TrwC	0.69
PF00353	HemolysinCabind	0.69
PF04316	FlgM	0.69
PF06356	DUF1064	0.69
PF00145	DNA_methylase	0.69
PF01494	FAD_binding_3	0.69
PF07486	Hydrolase_2	0.69
PF09414	RNA_ligase	0.69
PF02195	ParBc	0.69
PF06067	DUF932	0.69
PF03118	RNA_pol_A_CTD	0.69
PF01381	HTH_3	0.69
PF13394	Fer4_14	0.69
PF00166	Cpn10	0.69
PF09152	DUF1937	0.69
PF12236	Head-tail_con	0.69
PF02026	RyR	0.69
PF04865	Baseplate_J	0.69
PF08774	VRR_NUC	0.69
PF00176	SNF2-rel_dom	0.69
PF09954	DUF2188	0.69
PF01844	HNH	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	2.78
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	2.78
COG2747	Negative regulator of flagellin synthesis (anti-sigma28 factor)	Transcription [K]	2.08
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.39
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	1.39
COG5352	Uncharacterized conserved protein	Function unknown [S]	1.39
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	0.69
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.69
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.69
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.69
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.69
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.69
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.69
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.69
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
All Organisms	root	All Organisms	35.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
cellular organisms	root	All Organisms → cellular organisms	32.64 %
Viruses	superkingdom	All Organisms → Viruses	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.64 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.06 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.39 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.19 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.39 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.25 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.47 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.39 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.69 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.69 %
Hyphomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales	0.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.39 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.39 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.69 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.69 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.69 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.69 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.69 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.69 %
Hyphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae	0.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.39 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.69 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.69 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.69 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.69 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.69 %
unclassified Hyphomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → unclassified Hyphomonadaceae	0.69 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	1.39 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.69 %
Hyphomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → unclassified Hyphomonadaceae → Hyphomonadaceae bacterium	0.69 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.69 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.69 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.69 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.39 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Spirosoma	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma	0.69 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.69 %
Hyphomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → unclassified Hyphomonadaceae → Hyphomonadaceae bacterium	0.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.69 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.69 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.69 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.39 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Spirosoma sordidisoli	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma sordidisoli	0.69 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.69 %
Hyphomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → unclassified Hyphomonadaceae → Hyphomonadaceae bacterium	0.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.69 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.69 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.69 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908018\|SwRhBV22_Contig_3109	Not Available	543	Open in IMG/M
3300000956\|JGI10216J12902_100008905	Not Available	1407	Open in IMG/M
3300002930\|Water_102526	All Organisms → cellular organisms → Bacteria	3133	Open in IMG/M
3300004114\|Ga0062593_100260255	Not Available	1442	Open in IMG/M
3300004463\|Ga0063356_102533535	Not Available	786	Open in IMG/M
3300004479\|Ga0062595_100171175	Not Available	1298	Open in IMG/M
3300004643\|Ga0062591_100433977	Not Available	1100	Open in IMG/M
3300005093\|Ga0062594_101803647	Not Available	644	Open in IMG/M
3300005093\|Ga0062594_102023916	Not Available	616	Open in IMG/M
3300005148\|Ga0066819_1009947	Not Available	672	Open in IMG/M
3300005434\|Ga0070709_10563198	Not Available	873	Open in IMG/M
3300005436\|Ga0070713_102095542	Not Available	548	Open in IMG/M
3300005458\|Ga0070681_11679359	Not Available	561	Open in IMG/M
3300005535\|Ga0070684_100046286	All Organisms → cellular organisms → Bacteria → Proteobacteria	3769	Open in IMG/M
3300005542\|Ga0070732_10377999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	854	Open in IMG/M
3300005549\|Ga0070704_100988842	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300005564\|Ga0070664_100181499	All Organisms → cellular organisms → Bacteria	1871	Open in IMG/M
3300005617\|Ga0068859_100202228	All Organisms → cellular organisms → Bacteria	2071	Open in IMG/M
3300005764\|Ga0066903_100029694	All Organisms → cellular organisms → Bacteria	6144	Open in IMG/M
3300005764\|Ga0066903_100082018	All Organisms → cellular organisms → Bacteria	4219	Open in IMG/M
3300005764\|Ga0066903_101409768	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1309	Open in IMG/M
3300006163\|Ga0070715_10010095	All Organisms → cellular organisms → Bacteria	3354	Open in IMG/M
3300006163\|Ga0070715_10563205	Not Available	662	Open in IMG/M
3300006604\|Ga0074060_10005025	Not Available	893	Open in IMG/M
3300006641\|Ga0075471_10188102	Not Available	1080	Open in IMG/M
3300006881\|Ga0068865_100181231	Not Available	1622	Open in IMG/M
3300006881\|Ga0068865_102153045	Not Available	507	Open in IMG/M
3300007286\|Ga0104348_1001251	All Organisms → cellular organisms → Bacteria	3819	Open in IMG/M
3300009093\|Ga0105240_10755151	All Organisms → Viruses → Predicted Viral	1057	Open in IMG/M
3300009168\|Ga0105104_10005959	All Organisms → cellular organisms → Bacteria	8236	Open in IMG/M
3300009176\|Ga0105242_10079499	Not Available	2739	Open in IMG/M
3300009609\|Ga0105347_1000764	Not Available	14779	Open in IMG/M
3300009624\|Ga0116105_1188891	Not Available	563	Open in IMG/M
3300009826\|Ga0123355_10308711	Not Available	2147	Open in IMG/M
3300010233\|Ga0136235_1064694	Not Available	765	Open in IMG/M
3300010358\|Ga0126370_10076919	Not Available	2228	Open in IMG/M
3300010358\|Ga0126370_10569942	Not Available	971	Open in IMG/M
3300010366\|Ga0126379_10825339	Not Available	1027	Open in IMG/M
3300010366\|Ga0126379_11080670	Not Available	908	Open in IMG/M
3300010371\|Ga0134125_10519125	Not Available	1319	Open in IMG/M
3300010371\|Ga0134125_11998397	Not Available	630	Open in IMG/M
3300010376\|Ga0126381_100951666	Not Available	1238	Open in IMG/M
3300010379\|Ga0136449_101932235	Not Available	875	Open in IMG/M
3300010396\|Ga0134126_10155143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2771	Open in IMG/M
3300011119\|Ga0105246_12076154	Not Available	550	Open in IMG/M
3300011443\|Ga0137457_1000590	All Organisms → cellular organisms → Bacteria	9630	Open in IMG/M
3300014169\|Ga0181531_10005317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	7643	Open in IMG/M
3300014326\|Ga0157380_10802261	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300014489\|Ga0182018_10726882	Not Available	517	Open in IMG/M
3300014499\|Ga0182012_10202956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1388	Open in IMG/M
3300014969\|Ga0157376_10000280	All Organisms → cellular organisms → Bacteria	34613	Open in IMG/M
3300014969\|Ga0157376_11413219	Not Available	728	Open in IMG/M
3300015371\|Ga0132258_10304634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3920	Open in IMG/M
3300016404\|Ga0182037_10870144	Not Available	780	Open in IMG/M
3300017700\|Ga0181339_1038929	Not Available	517	Open in IMG/M
3300017792\|Ga0163161_10125773	Not Available	1930	Open in IMG/M
3300018047\|Ga0187859_10000386	All Organisms → cellular organisms → Bacteria → Proteobacteria	29808	Open in IMG/M
3300018481\|Ga0190271_11656516	Not Available	754	Open in IMG/M
3300019361\|Ga0173482_10527928	Not Available	578	Open in IMG/M
3300019890\|Ga0193728_1002886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8774	Open in IMG/M
3300020582\|Ga0210395_10054610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2927	Open in IMG/M
3300020582\|Ga0210395_10074485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	2499	Open in IMG/M
3300020582\|Ga0210395_10127121	All Organisms → cellular organisms → Bacteria → Proteobacteria	1895	Open in IMG/M
3300020582\|Ga0210395_10736653	Not Available	736	Open in IMG/M
3300020582\|Ga0210395_10762460	Not Available	722	Open in IMG/M
3300020583\|Ga0210401_10005518	All Organisms → cellular organisms → Bacteria	12996	Open in IMG/M
3300020583\|Ga0210401_10029111	Not Available	5265	Open in IMG/M
3300020583\|Ga0210401_10053938	All Organisms → Viruses → Predicted Viral	3793	Open in IMG/M
3300020583\|Ga0210401_11324313	Not Available	578	Open in IMG/M
3300021082\|Ga0210380_10026920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2450	Open in IMG/M
3300021168\|Ga0210406_11018987	Not Available	615	Open in IMG/M
3300021170\|Ga0210400_10976787	Not Available	689	Open in IMG/M
3300021178\|Ga0210408_11358154	Not Available	537	Open in IMG/M
3300021403\|Ga0210397_10001507	All Organisms → cellular organisms → Bacteria → Proteobacteria	14869	Open in IMG/M
3300021403\|Ga0210397_10161452	Not Available	1574	Open in IMG/M
3300021403\|Ga0210397_10280912	Not Available	1217	Open in IMG/M
3300021403\|Ga0210397_10632837	Not Available	819	Open in IMG/M
3300021405\|Ga0210387_10592134	Not Available	985	Open in IMG/M
3300021407\|Ga0210383_10002546	All Organisms → cellular organisms → Bacteria → Proteobacteria	16478	Open in IMG/M
3300021411\|Ga0193709_1000942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	9159	Open in IMG/M
3300021420\|Ga0210394_10029269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4975	Open in IMG/M
3300021433\|Ga0210391_10092986	Not Available	2379	Open in IMG/M
3300021475\|Ga0210392_10000401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27609	Open in IMG/M
3300021475\|Ga0210392_10000463	All Organisms → cellular organisms → Bacteria	24969	Open in IMG/M
3300021475\|Ga0210392_10000779	All Organisms → cellular organisms → Bacteria → Proteobacteria	17810	Open in IMG/M
3300021475\|Ga0210392_10000918	All Organisms → cellular organisms → Bacteria	16278	Open in IMG/M
3300021477\|Ga0210398_10036421	All Organisms → cellular organisms → Bacteria	4095	Open in IMG/M
3300021560\|Ga0126371_11340836	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	848	Open in IMG/M
3300024245\|Ga0247677_1027790	Not Available	811	Open in IMG/M
3300024249\|Ga0247676_1009285	Not Available	1493	Open in IMG/M
3300024249\|Ga0247676_1014742	Not Available	1214	Open in IMG/M
3300024254\|Ga0247661_1099871	Not Available	549	Open in IMG/M
3300025285\|Ga0208046_1081710	All Organisms → cellular organisms → Bacteria → Terrabacteria group	611	Open in IMG/M
3300025585\|Ga0208546_1060422	Not Available	888	Open in IMG/M
3300025899\|Ga0207642_10563625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	705	Open in IMG/M
3300025905\|Ga0207685_10054326	Not Available	1559	Open in IMG/M
3300025905\|Ga0207685_10455710	Not Available	666	Open in IMG/M
3300025906\|Ga0207699_10455177	Not Available	919	Open in IMG/M
3300025933\|Ga0207706_11678289	Not Available	512	Open in IMG/M
3300025938\|Ga0207704_10146043	Not Available	1662	Open in IMG/M
3300025941\|Ga0207711_11429391	Not Available	634	Open in IMG/M
3300025945\|Ga0207679_10380880	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma sordidisoli	1237	Open in IMG/M
3300025972\|Ga0207668_12104994	Not Available	508	Open in IMG/M
3300027460\|Ga0207506_1003084	Not Available	1214	Open in IMG/M
3300027513\|Ga0208685_1002384	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5776	Open in IMG/M
3300027743\|Ga0209593_10002196	All Organisms → cellular organisms → Bacteria	8281	Open in IMG/M
3300027874\|Ga0209465_10655719	Not Available	517	Open in IMG/M
3300028065\|Ga0247685_1013144	Not Available	983	Open in IMG/M
3300028146\|Ga0247682_1007155	Not Available	1924	Open in IMG/M
3300028566\|Ga0302147_10156945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	771	Open in IMG/M
3300028802\|Ga0307503_10000115	All Organisms → cellular organisms → Bacteria → Proteobacteria	41149	Open in IMG/M
3300028802\|Ga0307503_10010428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2717	Open in IMG/M
3300028802\|Ga0307503_10014414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2445	Open in IMG/M
3300030294\|Ga0311349_11506946	Not Available	624	Open in IMG/M
3300030399\|Ga0311353_10884311	Not Available	756	Open in IMG/M
3300030520\|Ga0311372_10936823	Not Available	1156	Open in IMG/M
3300030760\|Ga0265762_1012007	Not Available	1550	Open in IMG/M
3300030872\|Ga0265723_1026988	Not Available	533	Open in IMG/M
3300031199\|Ga0307495_10001630	Not Available	2355	Open in IMG/M
3300031231\|Ga0170824_100330122	Not Available	693	Open in IMG/M
3300031231\|Ga0170824_118174339	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1767	Open in IMG/M
3300031469\|Ga0170819_15796449	Not Available	841	Open in IMG/M
3300031708\|Ga0310686_106573468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2157	Open in IMG/M
3300031708\|Ga0310686_107288754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → unclassified Hyphomonadaceae → Hyphomonadaceae bacterium	967	Open in IMG/M
3300031726\|Ga0302321_102667608	Not Available	583	Open in IMG/M
3300031759\|Ga0316219_1056966	Not Available	1585	Open in IMG/M
3300031759\|Ga0316219_1113785	Not Available	1027	Open in IMG/M
3300031770\|Ga0318521_10413247	Not Available	805	Open in IMG/M
3300031897\|Ga0318520_11037347	Not Available	519	Open in IMG/M
3300031910\|Ga0306923_10236913	Not Available	2087	Open in IMG/M
3300031942\|Ga0310916_10324015	Not Available	1307	Open in IMG/M
3300032160\|Ga0311301_11957053	Not Available	687	Open in IMG/M
3300032205\|Ga0307472_100303948	Not Available	1284	Open in IMG/M
3300032205\|Ga0307472_101813561	Not Available	606	Open in IMG/M
3300032261\|Ga0306920_103354340	Not Available	596	Open in IMG/M
3300032770\|Ga0335085_10013772	Not Available	11838	Open in IMG/M
3300032770\|Ga0335085_10750170	Not Available	1080	Open in IMG/M
3300032893\|Ga0335069_10485842	Not Available	1435	Open in IMG/M
3300032898\|Ga0335072_10442259	Not Available	1374	Open in IMG/M
3300033134\|Ga0335073_10000894	Not Available	39406	Open in IMG/M
3300033134\|Ga0335073_11950013	Not Available	540	Open in IMG/M
3300033290\|Ga0318519_10699936	Not Available	619	Open in IMG/M
3300033407\|Ga0214472_10006106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12638	Open in IMG/M
3300033475\|Ga0310811_11446724	Not Available	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.72%
Host-Associated	Host-Associated	14.58%
Engineered	Engineered	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.92%
Plants	Host-Associated → Plants	13.89%
Aquatic	Environmental → Aquatic	11.81%
Arthropoda	Host-Associated → Arthropoda	0.69%
Wastewater	Engineered → Wastewater	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.44%
Freshwater	Environmental → Aquatic → Freshwater	7.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.25%
Peat	Environmental → Terrestrial → Peat	3.47%
Marine	Environmental → Aquatic → Marine	2.08%
Sediment	Environmental → Aquatic → Sediment	2.08%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.69%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.17%
Loam	Environmental → Terrestrial → Soil → Loam	9.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.47%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.08%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.08%
Coastal	Environmental → Aquatic → Marine → Coastal	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.39%
Lake	Environmental → Aquatic → Freshwater → Lake	0.69%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.69%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.69%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.69%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.08%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.39%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.69%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.69%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.69%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.69%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.08%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.08%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.39%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	1.39%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.39%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.39%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.39%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.39%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.39%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.69%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.69%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.69%
Estuary Water	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water	0.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.69%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.69%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.69%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.69%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.69%
Aeration Tank Of Activated Sludge Process	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Aeration Tank Of Activated Sludge Process	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908018	Switchgrass rhizosphere microbial communities from Rose Lake, Michigan, USA - BV2.2	Host-Associated	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002930	Estuary water microbial communities from Pearl Estuary, Zhujiang, China	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007286	Activated sludge microbial communities from bioreactor with dissolved oxygen in CSIR-NEERI, Nagpur, India ? 1ppm of oxygen, sample A	Engineered	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010233	Filterable freshwater microbial communities from Conwy River, North Wales, UK. Fraction, filtered through 0.2 um filter. After WGA.	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017700	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.D.D	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025285	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_300m (SPAdes)	Environmental	Open in IMG/M
3300025585	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027460	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-C (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030872	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhBV22_00001880	2124908018	Switchgrass Rhizosphere	MDKHARYALAHPVFDPDRQITMGHFWAYNFRVTAGLTVNIGMG
JGI10216J12902_1000089056	3300000956	Soil	MNQHVAFALAHPVYDPDKHIVAGHGWMIEPDVSALLTANIGDE*
Water_1025264	3300002930	Estuary Water	VKSQIEFALAHPVFDPERQIVRGHFWIVERLVSACLTVNIGEE*
Ga0062593_1002602552	3300004114	Soil	MHKQALHALAHPTFDPETQITSSNFWIAAPGVSACLTVNIGME*
Ga0063356_1025335351	3300004463	Arabidopsis Thaliana Rhizosphere	MHKQASFALAHPVFDPERQIGGHHWQIGRISAGLTVNIGME*
Ga0062595_1001711751	3300004479	Soil	MRSQVEFALAHPVFDPERQIVPGHYWVADRAAGISACLTVNIGME*
Ga0062591_1004339772	3300004643	Soil	VHRQAAYALAHPVFDPSTQITEGHGWRPTPRASAILTVNIGLE*
Ga0062594_1018036472	3300005093	Soil	VHRQAVYALAHPVFDPITQITQAHHWQAMPKVSACLTVNIGVE*
Ga0062594_1020239161	3300005093	Soil	MHKQALYALAHPTFDPLTQITSGNYWIAAPGISACLTVNIGME*
Ga0066819_10099472	3300005148	Soil	MKSQIEIALAHPVFDPVTQIIGDHRWWADRDISACLTVNIGME*
Ga0070709_105631983	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MHRQVAYALAHPVFDPERQIVRGHFWQPESHILAGLTVNIGME*
Ga0070713_1020955421	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MISQIEFALAHPVFDPDRQILPMHFWRAASDMSAGLTVNIGME*
Ga0070681_116793592	3300005458	Corn Rhizosphere	MTKHQIEFALAHPVFDPRRQIVRGHYWPYAADVSACLTVNIGME*
Ga0070684_1000462866	3300005535	Corn Rhizosphere	MNQHALYALAHPTFDPETQITAGNYWIAAPGISACLTVNIGME*
Ga0070732_103779993	3300005542	Surface Soil	MDGMKPHIEFALAHPVFDPERQIVTGHYWKVKRWVSACLTVNIGME*
Ga0070704_1009888423	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MHAQASFALAHPVFDPERQIIKGHYWRAEHAVTACLTVNIGM
Ga0070664_1001814992	3300005564	Corn Rhizosphere	MHKQAHHALAHPTFDPETQITSSNFWIAAPGVSACLTVNIGME*
Ga0068859_1002022282	3300005617	Switchgrass Rhizosphere	MRSQIEFALAHPVFDPTTQIVIGHYWWAVPESVSACLTVNLGME*
Ga0066903_1000296947	3300005764	Tropical Forest Soil	MHRQALFALAHPVFDPMKQITPRHGWMVTPKVSAMLTVNIGIE*
Ga0066903_1000820185	3300005764	Tropical Forest Soil	MKRLDSHALFALTHPVFDPETQIEHRHFWMPAKGITAGLTVNIGME*
Ga0066903_1014097685	3300005764	Tropical Forest Soil	MKKLDRHALFALAHPVFDPQRQIIHGHFWMPAKGISAGLTVNIGME*
Ga0070715_100100953	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRSQIAFALAHPVFDPVTQIVMGHFWSPAPGYGAGLTVNIGME*
Ga0070715_105632052	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRSQIEFALAHPVFDPFTQIVGGHYWAADRDISACLTVNIGME*
Ga0074060_100050252	3300006604	Soil	MKSQIEIALAHPVFDPVTQIIGDHYWWADRDISACLTVNIGME*
Ga0075471_101881023	3300006641	Aqueous	MNKAEFALSHPVYDPERQILPQHTTMVDRNVSACLTVNIGME*
Ga0068865_1001812311	3300006881	Miscanthus Rhizosphere	MRSQINFALAHPVFDPERDIVVGHSWRATRDISACLTVNIG
Ga0068865_1021530452	3300006881	Miscanthus Rhizosphere	MRSQIEFALAHPVFDPTTQIVLGHYWWAVPDVVSACLTVNIGMV*
Ga0104348_10012515	3300007286	Aeration Tank Of Activated Sludge Process	MIKQALYALAHPVFDPERQITGKHYWQADRDVTACLTVNIGME*
Ga0105240_107551513	3300009093	Corn Rhizosphere	MKSQVEFALAHPVFDPVTQIIGGHRWMVERFVSACLTVNIGME*
Ga0105104_100059598	3300009168	Freshwater Sediment	MEEESMRSQIEFALAHPVFDPERQIVAGHYWVADRAGGVSACLTVNIGEE*
Ga0105242_100794996	3300009176	Miscanthus Rhizosphere	MRSQIEFALAHPVFDPETQILPGHFWRAGPTLSAGLTCNIGVE*
Ga0105347_10007649	3300009609	Soil	MIPKTSIVFALAHPVYDPAKQILPGHFWIIDGETTGGLTVNIGLE*
Ga0116105_11888912	3300009624	Peatland	MREQVEFALAHPVFDPERQIIQGHYWAPERWVTACLTVNIGME*
Ga0123355_103087115	3300009826	Termite Gut	MMDVHAVYALAHPVFDPTREIARGHYWLAEHNVSACLTVNIGME*
Ga0136235_10646941	3300010233	Freshwater	MKQQIQFALAHPVFDPMTQIIAGHSWMAERFISCTLTVNIGME*
Ga0126370_100769193	3300010358	Tropical Forest Soil	MHRQALFALAHPVFDPLKQITPRHGWLVTPKVSAMLTVNIGIE*
Ga0126370_105699422	3300010358	Tropical Forest Soil	MDVSKHVAFALAHPVFDPEKQIVKGHFWEPRADVTAGLTVNIGME*
Ga0126379_108253393	3300010366	Tropical Forest Soil	MHKQAIYALAHPVFDPETQITRANFWLATPRVSACLSVNIGME*
Ga0126379_110806702	3300010366	Tropical Forest Soil	MKKLDRHALFALAHPVFDPQRQIIHGHFWMPAKGITAGLTVNIGME*
Ga0134125_105191251	3300010371	Terrestrial Soil	MKSQIEFALAHPVFDPERQIVRGHYWWAEPDRVSACLTVNIGME*
Ga0134125_119983972	3300010371	Terrestrial Soil	MQGKQVEFALAHPVFDPERQITPDHGWWVDRRATAMLTCNIGQE*
Ga0126381_1009516663	3300010376	Tropical Forest Soil	VRSQIEFALAHLVFDPERQIVAGHYWRCGDDMSACLTVNIGME*
Ga0136449_1019322354	3300010379	Peatlands Soil	MNSHVAFALAHPVFDPETQIIAGHWWLAERLISACLTVNIGME*
Ga0134126_101551436	3300010396	Terrestrial Soil	MNRQAAFALAHPVYNPETQILPGHHWKPERLISAGLTVNVGME*
Ga0105246_120761543	3300011119	Miscanthus Rhizosphere	ALAHPTFDPETQITSSNFWIAAPGVSACLTVNIGME*
Ga0137457_10005902	3300011443	Soil	MIPQVAFALAHPVYDPLTQIVPGHYWRTKHFGHCLTVNIGME*
Ga0181531_100053177	3300014169	Bog	MSNKQIAFALAHPVFDPERQIVSGHYWRPERDISAGLTVNIGME*
Ga0157380_108022613	3300014326	Switchgrass Rhizosphere	MNTHAAYSLAHPVFDPERDITPRHHWRQGRISFGLTANLGME*
Ga0182018_107268821	3300014489	Palsa	QIDFALAHPVFDPERQIVPGHYWRADRDVSACLTVNLGME*
Ga0182012_102029564	3300014499	Bog	MHKQALFALAHPVYDPQTDIVIGHYWLVEPDTSACLTVNIGAE*
Ga0157376_1000028039	3300014969	Miscanthus Rhizosphere	MKSQIAFALAHPVFDPTTQITRGHYWLAADNVSACLTVNIGQE*
Ga0157376_114132194	3300014969	Miscanthus Rhizosphere	MKSQVEFALAHPVFDPERQIVAGHYWQTDHDATACLTVNI
Ga0132258_103046347	3300015371	Arabidopsis Rhizosphere	MNRLIDQIAYALAHPVFDPERQITPGHFWRVSGDISAGLTVNIGQE*
Ga0182037_108701442	3300016404	Soil	MTHRQAAFALAHPVFDPRRQIFRGHYWAEERGISACLTVNLGME
Ga0181339_10389291	3300017700	Freshwater Lake	VHQQAVFALAHPVFDPERQIIKGHWWRAGNDVSACLTVNIGME
Ga0163161_101257734	3300017792	Switchgrass Rhizosphere	MKSQIAFALAHPVFDPTTQIVRGHYWIAGDAVSAALTVNIGME
Ga0187859_1000038652	3300018047	Peatland	MREQVEFALAHPVFDPERQIIQGHYWAPERWVTACLTVNIGME
Ga0190271_116565163	3300018481	Soil	VINVHAIFALAHPVFDPETQILPGHSWYVARDMSALLTVNIGME
Ga0173482_105279282	3300019361	Soil	MHKQALHALAHPTFDPETQITSSNFWIAAPGVSACLTVNIGME
Ga0193728_100288610	3300019890	Soil	MRSQVEFALAHPVYDPERQIVPGHFWRADRHVSAGLTANIGLE
Ga0210395_100546104	3300020582	Soil	VRSQIEFALQHPVFDPERQIVPGHHWWIDGGSVSACLTVNIGLE
Ga0210395_100744853	3300020582	Soil	VSVKQIEFALSRPVFDPETQIVPAHYFWISSTSIGACLTVNIGLE
Ga0210395_101271214	3300020582	Soil	MRSQVEFALAHPVFDPERQIVPGHSWWIGSSSVTACLTVNIGME
Ga0210395_107366532	3300020582	Soil	VKQVEFALAHPVYDPERQIVIGHFWWINGSSISACLTVNIGLE
Ga0210395_107624601	3300020582	Soil	VNQVEFALAHPVYDPERQIVHDHFWWLNGSSISACLTVNIGLE
Ga0210401_1000551824	3300020583	Soil	VSVKQVEFALAHPVYDPERQIVHDHFWWLNGSSISACLTVNIGLE
Ga0210401_1002911113	3300020583	Soil	MNAHVAFALAHPVFDPERQIVVGHYWRVDRDVSACLTVNIGME
Ga0210401_100539384	3300020583	Soil	MSVKQIEFALAHPVFDPERQMLAGHYWWIDSTSISACLTVNIGLE
Ga0210401_113243133	3300020583	Soil	MRSQVEFALAHPVFDPERQIVVGHFWWIDGSSISACLTVNIGME
Ga0210380_100269209	3300021082	Groundwater Sediment	MKSQVEFALAHPVFDPERQIVAGHYWQTDHDATACLTVNIGYE
Ga0210406_110189872	3300021168	Soil	MRSQIEFALQHPVFDPERQIVPGHYWWIDGGSVSACLTVNIGLE
Ga0210400_109767871	3300021170	Soil	MHKQATWALAHPVFDPERQIVRGHFWWPSPRISAGLTVNIGME
Ga0210408_113581541	3300021178	Soil	QHPVFDPERQIVPGHHWWIDGGSVSACLTVNIGLE
Ga0210397_1000150710	3300021403	Soil	MRSQIEFALQHPVFDPERQIVPGHYWWIDGGSMSACLTVNIGLE
Ga0210397_101614522	3300021403	Soil	MKSQVEFALAHPVFDPERQITPGHFWRCASDMTAGLTANIGLT
Ga0210397_102809122	3300021403	Soil	MRSQIEFALAHPVFDPRTQIVSGHYWRAGDTVSACLTVNIGME
Ga0210397_106328373	3300021403	Soil	MKSQVEFALAHPVFDPMRQIVRGHYWRCGDDMSACLTVNIGME
Ga0210387_105921342	3300021405	Soil	MRSQIEFALAHPVFDPDRQIVLGHNWWIGGSSISACLTVNIGME
Ga0210383_1000254612	3300021407	Soil	VNTHALFALAHPVFNPERQIVAGHYWAEERGVSACLTVNIGME
Ga0193709_10009428	3300021411	Soil	MSQRSIEDGMRSQVEFALAHPVYDPETQIVRGHYWRADRDVSAALTVNIGQE
Ga0210394_1002926912	3300021420	Soil	MKSQVEFALAHPVFDPERQITAAHYWAADRDVSACLTVNIGME
Ga0210391_100929862	3300021433	Soil	MDSHAAFALANPVFDPERQIIRGHYFVAERAVTACLTVNIGME
Ga0210392_1000040137	3300021475	Soil	MRQHIEFALSRPVFDPERQIVQGHYFWVGETSISACLTVNIGLE
Ga0210392_1000046346	3300021475	Soil	MRSQVEFALLHPVFDPERQIVPGHYWVPDRPGGVSACLTVNIGEE
Ga0210392_1000077910	3300021475	Soil	VRSQIEFALQHPVFDPMRQIVPGHYWWIDGGSMSACLTVNIGLE
Ga0210392_1000091813	3300021475	Soil	VSVKQVEFALAHPVFDPERHMVAGHYWWIGSSSISACLTVNIGLE
Ga0210398_100364219	3300021477	Soil	MRSQVEFALAHPVFDPDRQIVLGHNWWIGGSSISACLTVNIGME
Ga0126371_113408364	3300021560	Tropical Forest Soil	FALAHPVFDPQRQIIHGHFWMPAKGITAGLTVNIGME
Ga0247677_10277904	3300024245	Soil	LPTHKKGKNMRSQIAFALAHPVFDPLTQILPGHFWFASRHISVGLTCNIGLN
Ga0247676_10092854	3300024249	Soil	VRSQIVFALQHPVFDPYEQITAGHYWRAAHTVSACLTVNIGME
Ga0247676_10147424	3300024249	Soil	MRSQIAFALAHPVFDPTTQIVPGHYWRAGDTISACLTVNIGME
Ga0247661_10998712	3300024254	Soil	MRSQIEFALAHPVFDPERQIVTGHYWRAGDTVSACLTVNIGME
Ga0208046_10817102	3300025285	Freshwater	MSQYVSFALAHPVFNPEQQIIGGHHWMAERFVSACLTVNIGLE
Ga0208546_10604222	3300025585	Aqueous	MNKAEFALSHPVYDPERQILPQHTTMVDRNVSACLTVNIGME
Ga0207642_105636252	3300025899	Miscanthus Rhizosphere	MRSQIEFALAHPVFDPTTQIVLGHYWWAVPDVVSACLTVNIG
Ga0207685_100543266	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MLIMRSQIAFALAHPVFDPVTQIVMGHFWSPAPGYGAGLTVNIGME
Ga0207685_104557102	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRSQIEFALAHPVFDPFTQIVGGHYWAADRDISACLTVNIGME
Ga0207699_104551772	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MHRQVAYALAHPVFDPERQIVRGHFWQPESHILAGLTVNIGME
Ga0207706_116782892	3300025933	Corn Rhizosphere	HHALAHPTFDPETQITSSNFWIAAPGVSACLTVNIGME
Ga0207704_101460431	3300025938	Miscanthus Rhizosphere	MRSQINFALAHPVFDPERDIVVGHSWRATRDISACLTVNIGQE
Ga0207711_114293911	3300025941	Switchgrass Rhizosphere	MRSQIEFALAHPVFDPTTQIVIGHYWWAVPESVSACLTVNLGME
Ga0207679_103808802	3300025945	Corn Rhizosphere	MHKQAHHALAHPTFDPETQITSSNFWIAAPGVSACLTVNIGME
Ga0207668_121049943	3300025972	Switchgrass Rhizosphere	VYALAHPVFDPITQITQAHHWQAMPKVSACLTVNIGVE
Ga0207506_10030846	3300027460	Soil	MRSQVEFALAHPVFDPERQIVPGHYWVADRAAGISACLTVNIGME
Ga0208685_10023848	3300027513	Soil	MIPKTSIVFALAHPVYDPAKQILPGHFWIIDGETTGGLTVNIGLE
Ga0209593_100021967	3300027743	Freshwater Sediment	MRSQIEFALAHPVFDPERQIVAGHYWVADRAGGVSACLTVNIGEE
Ga0209465_106557191	3300027874	Tropical Forest Soil	MHRQALFALAHPVFDPMKQITPRHGWMVTPKVSAMLTVNIGIE
Ga0247685_10131442	3300028065	Soil	MKSQIAFALAHPVFDPTTQIVRGHYWIAGDAVSAALTVNIGIE
Ga0247682_10071556	3300028146	Soil	MERQQIEFALAHPVFDPDKQIVAGHTRVVDKFVTACVTVNIGME
Ga0302147_101569452	3300028566	Bog	MHKQALFALAHPVYDPQTDIVIGHYWLVEPDTSACLTVNIGAE
Ga0307503_100001155	3300028802	Soil	MKSQIEFALAHPVYDPRRQIVQGHYWWVEPGRTSACLTLNIGME
Ga0307503_100104284	3300028802	Soil	MHMQAAFALAHPIFDPERQIIDGHSWRAERDITACLTVNIGME
Ga0307503_100144142	3300028802	Soil	MHKQAAFALAHPVFDPERQIIDGHYWRADRDITACLTVNIGME
Ga0311349_115069462	3300030294	Fen	HIEGDEMKSQIEFALAHPVFDPERQITTGHYWAAARNVSACLTVNIGME
Ga0311353_108843112	3300030399	Palsa	MNAHGMFALAHPVFDPERQIIAGHYWAEERDVSACLTVNIGME
Ga0311372_109368231	3300030520	Palsa	MRSQIEFALAHPVYDPQTQIVRGHYWVAGDWVSACLTVNIGME
Ga0265762_10120074	3300030760	Soil	MKSQVEFALAHPVFDPERQIIAGHYWRADRDAAACLTVNIGME
Ga0265723_10269882	3300030872	Soil	MKSQIEIALAHPVFDPSTQIIRDHYWWAHRDVSACLTVNIGME
Ga0307495_100016305	3300031199	Soil	MHMQAAFALAHPVFDPERQIIDGHYWRADREVSACLTVNIGME
Ga0170824_1003301222	3300031231	Forest Soil	MRSQIEFALAHPVYDPLTQFLPGHFWLIDRTTVAGLTCNIGIT
Ga0170824_1181743396	3300031231	Forest Soil	MKTNHVEFALAHPVFDPMSQILPGHRWMVSDIISALLTVNIGME
Ga0170819_157964492	3300031469	Forest Soil	MKTNHVEFALAHPVFDPMTQILPGHRWMVSDIISALLTVNIGME
Ga0310686_1065734682	3300031708	Soil	MNTHAAFALAHPVFDPTRQIIPGHYWAEERGVSACLTVNIGME
Ga0310686_1072887542	3300031708	Soil	MMNTHAATALGHPVFDPERQITAAHYWTEERGISACLTVNIGME
Ga0302321_1026676082	3300031726	Fen	MRSQVEFALAHPVFDPETQIVKGHYWRAGKDISACLTVNIGSE
Ga0316219_10569663	3300031759	Freshwater	MNGQIEFALAHPVFDPVRQIVRGHFWVVERLVSACLTVNIGME
Ga0316219_11137853	3300031759	Freshwater	MNSQATFALAHPVFDPERQIIQGHYWAEERGVSACLTVNIGME
Ga0318521_104132473	3300031770	Soil	MTHRQAAFALAHPVFDPRRQIIRGHYWAEERGISACLTVNLGME
Ga0318520_110373472	3300031897	Soil	MRSQIEFALAHPVYDPERQIVAGHYWRIGDTDMSACLTVNIGME
Ga0306923_102369135	3300031910	Soil	MGRPAMRSQIEFALAHPVYDPERQIVAGHYWRIGDTDMSACLTVNIGME
Ga0310916_103240153	3300031942	Soil	GSTPPQREDMMTHRQAAFALAHPVFDPRRQIIRGHYWAEERGISACLTVNLGME
Ga0311301_119570531	3300032160	Peatlands Soil	MNSHVAFALAHPVFDPETQIIAGHWWLAERLISACLTVNIGME
Ga0307472_1003039482	3300032205	Hardwood Forest Soil	MLDKQIAYALAHPVFDPLKQITAGHFWLVDKQISAGLTVNIGME
Ga0307472_1018135613	3300032205	Hardwood Forest Soil	DRMKSQIEFALAHPVFDPFEQIVQGHYWWAKPGAVSACLTVNIGIE
Ga0306920_1033543401	3300032261	Soil	ALAHPVFDPARQITPGHAWRVGRIGALVTVNIGME
Ga0335085_1001377227	3300032770	Soil	MKDRHSVFALAHPVFNPETQIVPGHFWVAERMLSACLTVNIGME
Ga0335085_107501702	3300032770	Soil	MQPQVAFALAHPVFDPERQIISGHYWRADRDVSACLTVNIGME
Ga0335069_104858423	3300032893	Soil	MKSHIDFALAHPVFDPERQIISGHYWRADSDVSACLTVNIGME
Ga0335072_104422594	3300032898	Soil	MRSQVEFALAHPVYDPVTQIIPRHFWRCDGDLSACLTVNIGME
Ga0335073_1000089427	3300033134	Soil	MLSQAAFALMHPVYEPERDIVRGHYWLAAPTISACLTVNIGLE
Ga0335073_119500132	3300033134	Soil	MLSQVVFALAHPVYDPERDITRHHYWRAADRISACLTVNIGTE
Ga0318519_106999361	3300033290	Soil	DMMTHRQAAFALAHPVFDPRRQIIRGHYWAEERGISACLTVNLGME
Ga0214472_1000610615	3300033407	Soil	MHKQVKWALANPVFDPERQIVRGHFWFATPRVSAGLTVNIGME
Ga0310811_114467243	3300033475	Soil	KPMHKQAHHALAHPTFDPETQITSSNFWIAAPGVSACLTVNIGME

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051527

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences