NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F035429

Metagenome / Metatranscriptome Family F035429

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F035429
Family Type Metagenome / Metatranscriptome
Number of Sequences 172
Average Sequence Length 85 residues
Representative Sequence PEREFDASPYDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Number of Associated Samples 133
Number of Associated Scaffolds 172

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 62.79 %
% of genes near scaffold ends (potentially truncated) 41.28 %
% of genes from short scaffolds (< 2000 bps) 89.53 %
Associated GOLD sequencing projects 114
AlphaFold2 3D model prediction Yes
3D model pTM-score0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (56.395 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere
(10.465 % of family members)
Environment Ontology (ENVO) Unclassified
(38.953 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(65.698 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 23.01%    β-sheet: 18.58%    Coil/Unstructured: 58.41%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.74
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
e.43.1.2: Capz beta-1 subunitd3aa7b_3aa70.59719
c.43.1.4: benzylalcohol acetyl-, anthocyanin-O-hydroxy-cinnamoyl-, anthranilate-N-hydroxy-cinnamoyl/benzoyl-, deacetylvindoline acetyltransferase (BAHD) familyd2e1va22e1v0.59469
e.29.1.1: RNA-polymerase betad4c2mb_4c2m0.59464
a.124.1.1: Phospholipase Cd1ca1a11ca10.59448
c.74.1.0: automated matchesd2irpa_2irp0.57818


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 172 Family Scaffolds
PF13419HAD_2 33.72
PF04542Sigma70_r2 7.56
PF04239DUF421 3.49
PF10009DUF2252 3.49
PF04545Sigma70_r4 2.33
PF05199GMC_oxred_C 1.16
PF13581HATPase_c_2 1.16
PF01613Flavin_Reduct 1.16
PF00083Sugar_tr 1.16
PF09678Caa3_CtaG 0.58
PF00188CAP 0.58
PF00196GerE 0.58
PF00122E1-E2_ATPase 0.58
PF13466STAS_2 0.58
PF00230MIP 0.58
PF07238PilZ 0.58
PF00115COX1 0.58
PF00296Bac_luciferase 0.58
PF00218IGPS 0.58

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 172 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 7.56
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 7.56
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 7.56
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 7.56
COG2323Uncharacterized membrane protein YcaP, DUF421 familyFunction unknown [S] 3.49
COG1853FMN reductase RutF, DIM6/NTAB familyEnergy production and conversion [C] 1.16
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 1.16
COG0134Indole-3-glycerol phosphate synthaseAmino acid transport and metabolism [E] 0.58
COG0474Magnesium-transporting ATPase (P-type)Inorganic ion transport and metabolism [P] 0.58
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 0.58
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.58
COG2216K+ transport ATPase, ATPase subunit KdpBInorganic ion transport and metabolism [P] 0.58
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 0.58
COG2340Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domainCell cycle control, cell division, chromosome partitioning [D] 0.58


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A56.40 %
All OrganismsrootAll Organisms43.60 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001686|C688J18823_10887391Not Available566Open in IMG/M
3300002568|C688J35102_120022450Not Available849Open in IMG/M
3300002568|C688J35102_120944486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2743Open in IMG/M
3300003990|Ga0055455_10188237Not Available642Open in IMG/M
3300004081|Ga0063454_100337480Not Available968Open in IMG/M
3300004114|Ga0062593_100645095Not Available1020Open in IMG/M
3300004153|Ga0063455_100797291Not Available653Open in IMG/M
3300004479|Ga0062595_100731088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria801Open in IMG/M
3300004479|Ga0062595_100757616Not Available791Open in IMG/M
3300004479|Ga0062595_102514422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia514Open in IMG/M
3300005093|Ga0062594_102177140Not Available599Open in IMG/M
3300005329|Ga0070683_100011750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia7581Open in IMG/M
3300005329|Ga0070683_100122561All Organisms → cellular organisms → Bacteria2456Open in IMG/M
3300005329|Ga0070683_100441440Not Available1242Open in IMG/M
3300005330|Ga0070690_100368865All Organisms → cellular organisms → Bacteria1047Open in IMG/M
3300005334|Ga0068869_100855410Not Available785Open in IMG/M
3300005336|Ga0070680_100193825Not Available1713Open in IMG/M
3300005336|Ga0070680_100920158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales755Open in IMG/M
3300005338|Ga0068868_100104642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2294Open in IMG/M
3300005338|Ga0068868_101454167Not Available640Open in IMG/M
3300005338|Ga0068868_102421665All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300005340|Ga0070689_100255592All Organisms → cellular organisms → Bacteria1447Open in IMG/M
3300005341|Ga0070691_10133205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1261Open in IMG/M
3300005344|Ga0070661_100489840All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300005434|Ga0070709_10404163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1020Open in IMG/M
3300005435|Ga0070714_100241842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1666Open in IMG/M
3300005435|Ga0070714_101341421Not Available698Open in IMG/M
3300005435|Ga0070714_101919283Not Available578Open in IMG/M
3300005437|Ga0070710_10203261All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1252Open in IMG/M
3300005437|Ga0070710_10513219Not Available822Open in IMG/M
3300005438|Ga0070701_11178505All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300005439|Ga0070711_101560619All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria577Open in IMG/M
3300005441|Ga0070700_101685307All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300005457|Ga0070662_100788991Not Available807Open in IMG/M
3300005458|Ga0070681_10243917All Organisms → cellular organisms → Bacteria1710Open in IMG/M
3300005466|Ga0070685_11364587Not Available543Open in IMG/M
3300005535|Ga0070684_100196160All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1839Open in IMG/M
3300005539|Ga0068853_101431440Not Available669Open in IMG/M
3300005544|Ga0070686_100124900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1771Open in IMG/M
3300005545|Ga0070695_100149776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1627Open in IMG/M
3300005546|Ga0070696_100387295All Organisms → cellular organisms → Bacteria1091Open in IMG/M
3300005548|Ga0070665_101580105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium664Open in IMG/M
3300005576|Ga0066708_10700497Not Available641Open in IMG/M
3300005578|Ga0068854_101275242All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300005614|Ga0068856_101303020Not Available742Open in IMG/M
3300005614|Ga0068856_101514617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium684Open in IMG/M
3300005616|Ga0068852_100308855All Organisms → cellular organisms → Bacteria1533Open in IMG/M
3300005616|Ga0068852_101320642Not Available743Open in IMG/M
3300005618|Ga0068864_102534825Not Available519Open in IMG/M
3300005841|Ga0068863_100745289Not Available975Open in IMG/M
3300005842|Ga0068858_101946722Not Available581Open in IMG/M
3300005876|Ga0075300_1066784Not Available537Open in IMG/M
3300005885|Ga0075284_1024509Not Available763Open in IMG/M
3300006028|Ga0070717_10218649Not Available1674Open in IMG/M
3300006028|Ga0070717_11228123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria682Open in IMG/M
3300006046|Ga0066652_100102902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2308Open in IMG/M
3300006173|Ga0070716_100765278Not Available744Open in IMG/M
3300006175|Ga0070712_101133575Not Available679Open in IMG/M
3300006755|Ga0079222_10076936All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1666Open in IMG/M
3300006804|Ga0079221_10515947All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium780Open in IMG/M
3300006852|Ga0075433_11391732Not Available607Open in IMG/M
3300006854|Ga0075425_101128770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia892Open in IMG/M
3300006904|Ga0075424_100229398All Organisms → cellular organisms → Bacteria1973Open in IMG/M
3300006954|Ga0079219_12004040Not Available551Open in IMG/M
3300009137|Ga0066709_102846360Not Available640Open in IMG/M
3300009177|Ga0105248_10546192All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1307Open in IMG/M
3300009545|Ga0105237_10051773All Organisms → cellular organisms → Bacteria4124Open in IMG/M
3300009545|Ga0105237_11740139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium631Open in IMG/M
3300010152|Ga0126318_10268326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.1582Open in IMG/M
3300010152|Ga0126318_10290279Not Available956Open in IMG/M
3300010152|Ga0126318_10504545Not Available1026Open in IMG/M
3300010152|Ga0126318_11077903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium802Open in IMG/M
3300010371|Ga0134125_10018607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales7762Open in IMG/M
3300010371|Ga0134125_10061581Not Available4177Open in IMG/M
3300010371|Ga0134125_10397512Not Available1528Open in IMG/M
3300010371|Ga0134125_11483100All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria739Open in IMG/M
3300010396|Ga0134126_10122764Not Available3171Open in IMG/M
3300010401|Ga0134121_11203826Not Available757Open in IMG/M
3300012285|Ga0137370_10600578Not Available680Open in IMG/M
3300012501|Ga0157351_1038928Not Available585Open in IMG/M
3300012955|Ga0164298_10072754All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1734Open in IMG/M
3300012955|Ga0164298_10865733Not Available654Open in IMG/M
3300012960|Ga0164301_10607088Not Available809Open in IMG/M
3300012972|Ga0134077_10228616Not Available765Open in IMG/M
3300012985|Ga0164308_10481362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1034Open in IMG/M
3300012989|Ga0164305_10150634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1578Open in IMG/M
3300012989|Ga0164305_11208782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria655Open in IMG/M
3300013045|Ga0154016_100740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300013105|Ga0157369_10068883All Organisms → cellular organisms → Bacteria3802Open in IMG/M
3300013105|Ga0157369_10250578Not Available1848Open in IMG/M
3300013297|Ga0157378_11694435Not Available679Open in IMG/M
3300013307|Ga0157372_10294592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei → Conexibacter woesei DSM 146841887Open in IMG/M
3300014325|Ga0163163_10536567Not Available1232Open in IMG/M
3300014969|Ga0157376_10520500Not Available1172Open in IMG/M
3300015371|Ga0132258_13566766All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300015372|Ga0132256_100018441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6163Open in IMG/M
3300015373|Ga0132257_100389998Not Available1691Open in IMG/M
3300017792|Ga0163161_11179099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia661Open in IMG/M
3300018051|Ga0184620_10270347Not Available571Open in IMG/M
3300020069|Ga0197907_10279615Not Available872Open in IMG/M
3300020069|Ga0197907_10932749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria804Open in IMG/M
3300020069|Ga0197907_11065852Not Available734Open in IMG/M
3300020070|Ga0206356_10391697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia724Open in IMG/M
3300020070|Ga0206356_10496325Not Available786Open in IMG/M
3300020075|Ga0206349_1168237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria560Open in IMG/M
3300020075|Ga0206349_1319166Not Available516Open in IMG/M
3300020077|Ga0206351_10349216Not Available613Open in IMG/M
3300020078|Ga0206352_10885593Not Available816Open in IMG/M
3300020078|Ga0206352_11053858All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia545Open in IMG/M
3300020080|Ga0206350_10356361Not Available808Open in IMG/M
3300020081|Ga0206354_10015567All Organisms → cellular organisms → Bacteria2607Open in IMG/M
3300020081|Ga0206354_10547807All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium572Open in IMG/M
3300020081|Ga0206354_11233575All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria608Open in IMG/M
3300020082|Ga0206353_11252127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD00823039Open in IMG/M
3300020082|Ga0206353_11303927Not Available699Open in IMG/M
3300021445|Ga0182009_10066436Not Available1572Open in IMG/M
3300022467|Ga0224712_10251474Not Available817Open in IMG/M
3300022756|Ga0222622_11073893Not Available592Open in IMG/M
3300025321|Ga0207656_10492949Not Available621Open in IMG/M
3300025898|Ga0207692_10282925Not Available1004Open in IMG/M
3300025898|Ga0207692_10412400Not Available844Open in IMG/M
3300025899|Ga0207642_10456899Not Available775Open in IMG/M
3300025901|Ga0207688_10114378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1569Open in IMG/M
3300025904|Ga0207647_10247658Not Available1023Open in IMG/M
3300025911|Ga0207654_10402756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria952Open in IMG/M
3300025912|Ga0207707_10177181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1862Open in IMG/M
3300025914|Ga0207671_11051007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria641Open in IMG/M
3300025915|Ga0207693_11188602Not Available575Open in IMG/M
3300025915|Ga0207693_11343174Not Available533Open in IMG/M
3300025917|Ga0207660_10367701Not Available1154Open in IMG/M
3300025918|Ga0207662_10098883All Organisms → cellular organisms → Bacteria → Terrabacteria group1806Open in IMG/M
3300025919|Ga0207657_10340178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1184Open in IMG/M
3300025921|Ga0207652_10021173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter5365Open in IMG/M
3300025923|Ga0207681_11715800Not Available525Open in IMG/M
3300025924|Ga0207694_10038188All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3692Open in IMG/M
3300025924|Ga0207694_10317969Not Available1284Open in IMG/M
3300025925|Ga0207650_11794853Not Available519Open in IMG/M
3300025927|Ga0207687_10036736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3337Open in IMG/M
3300025929|Ga0207664_10814018Not Available840Open in IMG/M
3300025932|Ga0207690_10115976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1936Open in IMG/M
3300025936|Ga0207670_11089132Not Available674Open in IMG/M
3300025938|Ga0207704_10345087Not Available1157Open in IMG/M
3300025942|Ga0207689_11243561Not Available626Open in IMG/M
3300025944|Ga0207661_10030863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4132Open in IMG/M
3300026009|Ga0208530_1008972Not Available737Open in IMG/M
3300026035|Ga0207703_10528265Not Available1110Open in IMG/M
3300026078|Ga0207702_10599610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1081Open in IMG/M
3300026078|Ga0207702_11026648Not Available818Open in IMG/M
3300026095|Ga0207676_10727288Not Available964Open in IMG/M
3300026116|Ga0207674_11583917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria624Open in IMG/M
3300026142|Ga0207698_10752714Not Available973Open in IMG/M
3300027725|Ga0209178_1082759Not Available1056Open in IMG/M
3300028379|Ga0268266_10794705Not Available914Open in IMG/M
3300028704|Ga0307321_1099368Not Available590Open in IMG/M
3300028755|Ga0307316_10165660Not Available790Open in IMG/M
3300028784|Ga0307282_10101440All Organisms → cellular organisms → Bacteria1335Open in IMG/M
3300028796|Ga0307287_10105887Not Available1062Open in IMG/M
3300028875|Ga0307289_10402498Not Available563Open in IMG/M
3300030336|Ga0247826_11214377Not Available605Open in IMG/M
3300030829|Ga0308203_1034261Not Available720Open in IMG/M
3300030902|Ga0308202_1053745Not Available745Open in IMG/M
3300030903|Ga0308206_1137688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium578Open in IMG/M
3300031091|Ga0308201_10118070Not Available791Open in IMG/M
3300031091|Ga0308201_10269324Not Available594Open in IMG/M
3300031740|Ga0307468_102281875Not Available525Open in IMG/M
3300031938|Ga0308175_100156698All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2191Open in IMG/M
3300031938|Ga0308175_102585302Not Available568Open in IMG/M
3300031939|Ga0308174_11534487Not Available571Open in IMG/M
3300031939|Ga0308174_11591314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium561Open in IMG/M
3300032074|Ga0308173_10406819Not Available1199Open in IMG/M
3300033475|Ga0310811_11043784Not Available706Open in IMG/M
3300033550|Ga0247829_10758524Not Available808Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere10.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere9.88%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere6.98%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere6.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.07%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.07%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.49%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.49%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.49%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil2.33%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.33%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.33%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.91%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.74%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.74%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.16%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.16%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.16%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.58%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.58%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.58%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.58%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.58%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.58%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.58%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.58%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.58%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.58%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.58%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.58%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.58%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005876Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401EnvironmentalOpen in IMG/M
3300005885Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010152Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012501Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013045Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020077Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026009Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401 (SPAdes)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028704Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J18823_1088739113300001686SoilVDPSADPGADRXPYDADGAIAVPEAPGWRYLTIEPSADASISVALAGPDGATAAFTVPAFLSRGDELGEVARIVIRAWERMDRASGLGA*
C688J35102_12002245023300002568SoilYDADGAIAVPEAPGWRYLTIEPSADASISVALAGPDGATAAFTVPAFLSRGDELGEVARIVIRAWERMDRASGLGA*
C688J35102_12094448613300002568SoilVAGSPDHRGDDSPYDDEGRVDVPSAPEWTYASIRGDGGEGLAVELEGPDDAKLTFTVPNFLARGDEIGEVARVVIRAWERTQRAAGLGA*
Ga0055455_1018823713300003990Natural And Restored WetlandsRHGHGTAMEADTERDSSPYDEQGRVDVPGAPGWRYLPFAPTGNDSLAVTIAGPDDVRISFTVPGFLSRGDELGEVTRVVIRAWERMDRASGLGA*
Ga0063454_10033748023300004081SoilVDPSADPGADRLPYDADGAIAVPEAPGWRYLTIEPSADASISVALAGPDGATAAFTVPAFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0062593_10064509523300004114SoilVGGSPEHGTDTPYDAEGRVGVPGAPEWRYASIGGQGDEALAVQLEGPDDARLAFTVPEFLSRGDELGEVARIVIRAWERTVRAAGLGG*
Ga0063455_10079729113300004153SoilVDPSADPGADRVPYDADGAIAVPEAPGWRYLTIEPSADASISVALAGPDGATAAFTVPAFLSRGDELGEVARIVIRAWERMDRAS
Ga0062595_10073108823300004479SoilVAGSPEHRGDDTPYDDQGRVGVPGAPEWRYANIRGDGGDALAVALEGPDDARLAFTVPDFLARGDEIGEVARVVIRAWERTQRAAGLGA*
Ga0062595_10075761623300004479SoilVRADPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0062595_10251442213300004479SoilMDAGTEHRGDASPYDEQGRIEVPGATGWRYLPIEPAGEDALAVTLAGPDDVHVGFTVPDFVSRGEELGEIARLVIRARERMDRSAGLGA*
Ga0062594_10217714013300005093SoilMQEDTPYDAEGRVEVPGAPGWSYSSIGGAGGHALSVEMAGPDDAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0070683_10001175053300005329Corn RhizosphereVQDDTPYDAEGRVEVPGAPGWAYRSIHGAGGDALSVEMTGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA*
Ga0070683_10012256143300005329Corn RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGQDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070683_10044144023300005329Corn RhizosphereMDAGTEQRGDASPYDEQGRIEVPGAAGWRYLPMAPASEDTLAVTLAGPDDVHVSFTVPDFVSRGEELGEIARLVIRARERMDRSAGLGA*
Ga0070690_10036886523300005330Switchgrass RhizospherePEREFDASPYDAEGRVGVPGADGWRYLPIRPAGEDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0068869_10085541023300005334Miscanthus RhizosphereSPYDAEGRVGVPGADGWRYLPIHPDGGDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070680_10019382523300005336Corn RhizosphereVRADPEREFDASPYDAEGRVGVPGAGGWRYLPIHPDGGDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070680_10092015823300005336Corn RhizosphereMHDDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0068868_10010464233300005338Miscanthus RhizosphereMQDDTPYDAEGRVEVPGAPGWAYRSIHGAGGDAISVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA*
Ga0068868_10145416713300005338Miscanthus RhizosphereVRSDPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGEDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASG
Ga0068868_10242166523300005338Miscanthus RhizosphereDPEREFDASPYDAEGRVGVPGADGWRYLPIHPDGGDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070689_10025559223300005340Switchgrass RhizosphereVRSDPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070691_1013320523300005341Corn, Switchgrass And Miscanthus RhizosphereMQEDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0070661_10048984013300005344Corn RhizosphereTAVRSDPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070709_1040416313300005434Corn, Switchgrass And Miscanthus RhizosphereMPAGRHESESREPPADESPYDAEGRVSVPGAPEWRYRSIRGAADHSLAVELRGPDDAQAAFTVPDFLGRGDEIGEVARVVIRAWERTQRAA
Ga0070714_10024184233300005435Agricultural SoilMPAGRHESESREPPADESPYDAEGRVSVPGAPEWRYRSIRGAADHSLAVELRGPDDAQAAFTVPDFLGRGDEIGEVARVVIRAWERTQRAAGVGG*
Ga0070714_10134142113300005435Agricultural SoilVDRPPQQPAADSPYDAGGRVDVPDAPGWQYLGIHGDDGDALAVEMAGPDDVRVAFSVPDFLSRGDELGEVARIVIRAWERKERAAGLGA*
Ga0070714_10191928313300005435Agricultural SoilMHDNTPYDAEGRVEVPGAPGWAYRSIHGAGDNAISVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIR
Ga0070710_1020326123300005437Corn, Switchgrass And Miscanthus RhizosphereMDHPPEQPPADDSPYDAHGRVDVPDAPDWQYVSIHGDAGDALAVELAGPDDARIAFTVPNFMNRGDELGEVTRIVIRSWERKERAAGLGA*
Ga0070710_1051321913300005437Corn, Switchgrass And Miscanthus RhizosphereMPAGRHESESREPPADESPYDAEGRVSVPGAPEWRYRSIRGAADHSLAVELRGPDDAQAAFTVPDFLGRGDEIGEVARVVIRAWERTQRAAGVG
Ga0070701_1117850513300005438Corn, Switchgrass And Miscanthus RhizosphereVRTDPEREFDASPYDEEGRVGVPGADGWRYLPIRPAGEDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070711_10156061923300005439Corn, Switchgrass And Miscanthus RhizosphereDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA*
Ga0070700_10168530723300005441Corn, Switchgrass And Miscanthus RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGEDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070662_10078899113300005457Corn RhizosphereVRSDPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGEDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070681_1024391733300005458Corn RhizosphereVRSDPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGEDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070685_1136458713300005466Switchgrass RhizosphereMQEDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA*
Ga0070684_10019616013300005535Corn RhizosphereEDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0068853_10143144023300005539Corn RhizosphereMQEDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0070686_10012490013300005544Switchgrass RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIHPDGGDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070695_10014977643300005545Corn, Switchgrass And Miscanthus RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGEDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIR
Ga0070696_10038729523300005546Corn, Switchgrass And Miscanthus RhizosphereVRADPEREFAASPYDAEGRVGVPGADGWRYLPIHPDGGDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070665_10158010523300005548Switchgrass RhizosphereRVEVPGAPGWAYRSIHGAGGDALSVEMTGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA*
Ga0066708_1070049723300005576SoilVNAHGGIDGTSRSPYDTEGRIAVLDAPGWSYLLIESGDNEALAVTLEGPKRIRVQFAVPAFLSRGDELGDVARIVIRAWERMDRAAGLGA*
Ga0068854_10127524223300005578Corn RhizosphereVRADPEREFDASPYDEEGRVGVPGADGWRYLPIRPAGEDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0068856_10130302023300005614Corn RhizosphereMHDDTPYDADGRVEVPGAPGWAYRSIHGAGGDALSVEMAGPDDAHVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0068856_10151461713300005614Corn RhizosphereDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0068852_10030885533300005616Corn RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGEDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0068852_10132064213300005616Corn RhizosphereVAGSPENRDDTPYDDAGRVGVPGAPDWAYAAIRGDGGDALAVELAGPEDASVAFTVPDFLSRGDEIGEVARVVIRAWERTQRAAGLGA*
Ga0068864_10253482513300005618Switchgrass RhizosphereVQDDTPYDAEGRVEVPGAPGWAYRSIHGAGGDAISVEMAGPDDAQAAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA*
Ga0068863_10074528933300005841Switchgrass RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGEDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRAS
Ga0068858_10194672223300005842Switchgrass RhizosphereMQDDTPYDAEGRVEVPGAPGWAYRSIHGAGGDAISVEMAGPDDAQVAFTVPDCLIRGDELGEVARVVIRAWERTVRAAGLGA*
Ga0075300_106678423300005876Rice Paddy SoilASPFDEQGRVDVPGAPGWRYLPISPSGNDSLAVTVAGPEDVRLSFTVPGFLSRGDELGEVTRVVIRAWERMDRASGLGA*
Ga0075284_102450923300005885Rice Paddy SoilMDAGTERDRDASPFDEQGRVDVPGAPGWRYLPISPSGNDSLAVTVAGPEDVRLSFTVPGFLSRGDELGEVTRVVIRAWERMDRASGLGA*
Ga0070717_1021864933300006028Corn, Switchgrass And Miscanthus RhizosphereMDHPPEQPPADDSPYDAHGRVDVPDAPGWQYVSIHGDAGDALAVELAGPDDARIAFTVPNFMNRGDELGEVTRIVIRSWERKERAAGLGA*
Ga0070717_1122812323300006028Corn, Switchgrass And Miscanthus RhizosphereMHDDTPYDAEGRVEVPGAPGWAYRSIHGAGDNAISVEMAGPDDAQVAFTVPAFLSRGDELGEVARVVIRAWERTVRAAGLGA*
Ga0066652_10010290243300006046SoilVTADPQHEPDASPYDAEGRIDVPGAPGWRYLPFQPANDDALDVTLAGPDDVRVSFRVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0070716_10076527823300006173Corn, Switchgrass And Miscanthus RhizospherePRRAMPAGRHESESREPPADESPYDAEGRVSVPGAPEWRYRSIRGAADHSLAVELRGPDDAQAAFTVPDFLGRGDEIGEVARVVIRAWERTQRAAGVGG*
Ga0070712_10113357513300006175Corn, Switchgrass And Miscanthus RhizosphereVSGPPEHLGGDEPYDARGRVGVPGAPEWTYLSIHGHADDALAVQLEGPDDASVSFIVPKFLSRGDEIGEVARVVIRAWERTVRAAGVGG*
Ga0079222_1007693623300006755Agricultural SoilVQDDTPYDAEGRVEVPGAPGWAYSSIHGAGGDALSVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA*
Ga0079221_1051594713300006804Agricultural SoilVGRPSQNPAPDSPYDAGGRVDVPDAPGWQYLGIHGDGADTLSVEVAGPDDARVAFTVPGFLSRGDELGEVARIVIRAWERKERAAGLGA*
Ga0075433_1139173223300006852Populus RhizosphereVGRSPEQAGDATPYDTQGRVGVPGAPEWAYRSIRGDGAQDLVVELEGPDDAHAAFTVPGFLGRGDEIGEVARIVIRAWERTQRAAGLGG*
Ga0075425_10112877023300006854Populus RhizosphereVNADPQREPDASPYDAEGRIDVPGAPGWRYLPIQPANEDALAVTLSGPDDVHVSFTVPDFLSRGDELGEVGRIVIRAWERMDRASGLGA*
Ga0075424_10022939833300006904Populus RhizosphereVNADPQREPDASPYDAEGRIDVPGAPGWRYLPIQPANEDALAVTLAGPDDVHVSFTVPDFLSRGDELGEVGRIVIRAWERMDRASGLGA*
Ga0079219_1200404023300006954Agricultural SoilMHDDTPYDAEGRVEVPGAPGWAYRSIHGAGGGALSVEMAGPDDAHVIFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA*
Ga0066709_10284636013300009137Grasslands SoilVNAHGGIDGTSRSPYDTEGRIAVPDAPGWSYLLIESGDNEALAVTLEGPKRIRVQFAVPAFLSRGDELGDVARIVIRAWERMDRAAGLGA*
Ga0105248_1054619243300009177Switchgrass RhizosphereVRTDPEREFDASPYDEEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0105237_1005177323300009545Corn RhizosphereMQEDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVTLTVPVFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0105237_1174013923300009545Corn RhizosphereVPGAPELRYANIRGDGGDALAVALEGPDDARLAFTVPDFLARGDEIGEVARVVIRAWERTQRAAGLGA*
Ga0126318_1026832633300010152SoilDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDHAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0126318_1029027923300010152SoilDEEGRVGVPGAPEWSYASIHGDGGDALVVELEGPDDARAAFTVPDFLGRGDEIGEVARVVIRAWERTQRAAGLGA*
Ga0126318_1050454513300010152SoilDAEGRVEVPGAPGWAYRSIHGAGGDAISVEMAGPDDAQAAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA*
Ga0126318_1107790313300010152SoilPREHDAAGDSPYDPEGGVEVPGAPDWRYRSIGGGDAGDALAVELAGPGDTGLRFVVPDFLSRGDELGEVARIVIRAWERKERSKGLGA*
Ga0134125_1001860753300010371Terrestrial SoilMPAGRHESESREPPADESPYDAEGLVSVPGAPEWRYRSIRGAADHSLAVELRGPDDAQAAFTVPDFLGRGDEIGEVARVVIRAWERTQRAAGVGG*
Ga0134125_1006158153300010371Terrestrial SoilVGGSSEQQGGDTPYDTEGRVGIPGAPEWAYGSIRGNGSDDLVVELEGPDDAHVVFTVPNFLSRGDEIGEVARVVIRAWERTARAAGLGA*
Ga0134125_1039751213300010371Terrestrial SoilMQDDTPYDAQGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0134125_1148310023300010371Terrestrial SoilMQDDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0134126_1012276443300010396Terrestrial SoilMQDDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVELAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0134121_1120382613300010401Terrestrial SoilMHDDTPYDADGRVEVPGAPGWAYRSIHGAGGDALSVEMAGPDDAHVTFTVPDFLSRGDELGEVARVVIRAWERTVRAAG
Ga0137370_1060057813300012285Vadose Zone SoilGGIDGTSRSPYDTEGRIAVPDAPGWSYLLIESGDNEALAVTLEGPKRIRVQFAVPAFLSRGDELGDVARIVIRAWERMDRAAGLGA*
Ga0157351_103892823300012501Unplanted SoilVRADPEREFDASPYDAEGRVGVPGADGWRYLPIHPDGGDALHVTVAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0164298_1007275443300012955SoilMPAGRHESESREPPADESPYDAEGRVSVPGAPEWRYRSIRGAADHSLAVELRGPDDAQAAFTVPDFLGRGDEIGEVARVVIRAWERTERAAGVGG*
Ga0164298_1086573313300012955SoilVRADPEREFDASPYDAEGRVGVPGADGWRYLPIHPDGGDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLG
Ga0164301_1060708823300012960SoilMPAGRHESESREPPADESPYDAEGRVSVPGAPEWRYLSIRGGADHALTVELQGPDDARVAFTVPDFLGRGDEIGEVARVVI
Ga0134077_1022861613300012972Grasslands SoilVNAHGGIDGTSRSPYDTEGRIAVPDAPGWSYLLIESGDNEALAVTLEGPKRIRVQFAVPAFLSRGDELGDVARIVIRAWERMDRAA
Ga0164308_1048136223300012985SoilMPAGRHESESREPPADESPYDAEGRVLVPGAPEWRYRSIRGAADHSLAVELRGPDDAQAAFTVPDFLGRGDEIGEVARVVIRAWERTQRAAGVGG*
Ga0164305_1015063443300012989SoilVRADPEREFDASPYDAEGRVGVPGADGWRYLPIHPDGGDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIV
Ga0164305_1120878223300012989SoilEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0154016_10074023300013045Corn, Switchgrass And Miscanthus RhizosphereGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDHAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0157369_1006888353300013105Corn RhizosphereVRADPEREFAASPYDAEGRVGVPGADGWRYLPIRPAGQDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0157369_1025057823300013105Corn RhizosphereMQEDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDHAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA*
Ga0157378_1169443523300013297Miscanthus RhizosphereVRSDPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGEDALHVTLAGPDDVQIGFTGPDFLSRGDELGEVARIVIRAWERMDRASG
Ga0157372_1029459213300013307Corn RhizosphereVRADPEREFAASPYDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0163163_1053656733300014325Switchgrass RhizosphereVRADPEREFDASPYDADGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0157376_1052050033300014969Miscanthus RhizosphereVRADPEREFDASPYDAEGRVGVPGAEGWRYLPIRPAGEDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0132258_1356676633300015371Arabidopsis RhizosphereMHAQSGVDGTGGSPYDTEGRIAVPDAPGWSYGLIAPGGDETLAVTLEGPEGTVVQFAVPAFLSRGDELGEVARIVIRAWER
Ga0132256_10001844183300015372Arabidopsis RhizosphereMHDDTPYDADGRVEVPGAPGWAYRSIHGAGGDALSVEMAGPDDAHVTFTVPDFLSRGDELGEVARVVIR
Ga0132257_10038999823300015373Arabidopsis RhizosphereVNAEPQRNRDASPYDAEGRVDVPGAPDWRYLPIRPAGEAALDVTVAGPDGVEVGFTVPGFMSRGDELGEVARIVIRAWERMDRASGLGA*
Ga0163161_1117909913300017792Switchgrass RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGEDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0184620_1027034713300018051Groundwater SedimentMDASASPVDDGGTIAVPGAPGWRYLPIEPDGEDSLAVTLDGPDDARVTFSVPTFLSRGAELGEVARVVIRAWERMDRSAGLGA
Ga0197907_1027961513300020069Corn, Switchgrass And Miscanthus RhizospherePENRDDTPYDDAGRVGVPGAPDWAYAAIRGDGGDALAVELAGPEDASVAFTVPDFLSRGDEIGEVARVVIRAWERTQRAAGLGA
Ga0197907_1093274923300020069Corn, Switchgrass And Miscanthus RhizosphereMQEDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA
Ga0197907_1106585213300020069Corn, Switchgrass And Miscanthus RhizosphereAEGRVEVPGAPGWAYRSIHGAGGDALSVEMTGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA
Ga0206356_1039169713300020070Corn, Switchgrass And Miscanthus RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGEDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0206356_1049632523300020070Corn, Switchgrass And Miscanthus RhizosphereDTPYDAEGRVEVPGAPGWAYRSIHGAGGDALSVEMTGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA
Ga0206349_116823713300020075Corn, Switchgrass And Miscanthus RhizospherePYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDHAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA
Ga0206349_131916613300020075Corn, Switchgrass And Miscanthus RhizosphereDPEREFDASPYDEEGRVGVPGADGWRYLPIRPAGEDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0206351_1034921623300020077Corn, Switchgrass And Miscanthus RhizospherePEREFDASPYDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0206352_1088559313300020078Corn, Switchgrass And Miscanthus RhizosphereTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDHAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA
Ga0206352_1105385823300020078Corn, Switchgrass And Miscanthus RhizosphereSPYDAEGRVGVPGADGWRYLPIRPAGEDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0206350_1035636123300020080Corn, Switchgrass And Miscanthus RhizosphereEFDASPYDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0206354_1001556713300020081Corn, Switchgrass And Miscanthus RhizosphereMQEDTPYDAEGRVEVPGAPGWSYSSIGGAGGHALSVEMAGPDDAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA
Ga0206354_1054780713300020081Corn, Switchgrass And Miscanthus RhizosphereQDDTPYDAEGRVEVPGAPGWAYSSIHGAGGDALSVEMTGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA
Ga0206354_1123357513300020081Corn, Switchgrass And Miscanthus RhizosphereVAGSPENRDDTPYDDAGRVGVPGAPDWAYAAIRGDGGDALAVELAGPEDASVAFTVPDFLSRGDEIGEVARVVIRAWERTQRAAGLGA
Ga0206353_1125212733300020082Corn, Switchgrass And Miscanthus RhizosphereMQEDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDHAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA
Ga0206353_1130392723300020082Corn, Switchgrass And Miscanthus RhizosphereVTGSQEPRSGDTPYDDQGRVGVPGAPEWTYASIRGDGGDALAVELEGPDDAKVAFSVPDFLGRGDEIGEVARVVIRAWERTQRAAGLGA
Ga0182009_1006643633300021445SoilMDVGTEQRGDASPYDEQGRIEVPGATGWRYLPIEPAGEDALAVTLAGPDDVHVGFTVPDFVSRGEELGEIARLVIRARERMDRSAGLGA
Ga0224712_1025147413300022467Corn, Switchgrass And Miscanthus RhizosphereTPYDAEGRVEVPGAPGWAYRSIHGAGGDALSVEMTGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA
Ga0222622_1107389313300022756Groundwater SedimentMDARPDPVAGRAPYDAEGGIAVPDAPGWRYLTIEPGEDASISVTLAGPDGANAGFTVPAFLSRGDELGEVARIVIRAWERMDRASG
Ga0207656_1049294913300025321Corn RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0207692_1028292543300025898Corn, Switchgrass And Miscanthus RhizosphereMDHPPEQPPADDSPYDAHGRVDVPDAPDWQYVSIHGDAGDALAVELAGPDDARIAFTVPNFMNRGDELGEVTRIVIRSWERKERAAGLGA
Ga0207692_1041240013300025898Corn, Switchgrass And Miscanthus RhizosphereMPAGRHESESREPPADESPYDAEGRVSVPGAPEWRYRSIRGAADHSLAVELRGPDDAQAAFTVPDFLGRGDEIGEVARVVIRAWERTQRAAGVGG
Ga0207642_1045689923300025899Miscanthus RhizosphereEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0207688_1011437813300025901Corn, Switchgrass And Miscanthus RhizosphereVRADPEREFAASPYDAEGRVGVPGADGWRYLPIRPAGEDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMD
Ga0207647_1024765823300025904Corn RhizosphereVRADPEREFDASPYDEEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0207654_1040275623300025911Corn RhizosphereMQDDTPYDAEGRVEVPGAPGWAYRSIHGAGGDAISVEMAGPDDAQAAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA
Ga0207707_1017718123300025912Corn RhizosphereMHDDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA
Ga0207671_1105100723300025914Corn RhizosphereVQDDTPYDAEGRVEVPGAPGWAYRSIHGAGGDALSVEMTGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA
Ga0207693_1118860213300025915Corn, Switchgrass And Miscanthus RhizosphereVSGPPEHLGGDEPYDARGRVGVPGAPEWTYLSIHGHADDALAVQLEGPDDASVSFIVPKFLSRGDEIGEVARVVIRAWERTVRAAGVGG
Ga0207693_1134317413300025915Corn, Switchgrass And Miscanthus RhizosphereVERPPQQPAADSPYDAGGRVDVPDAPGWQYLGIHGDDGDALAVEMAGPDDVRVAFSVPDFLSRGDELGEVARIVIRAWERKERAAGLGA
Ga0207660_1036770123300025917Corn RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIHPDGGDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0207662_1009888323300025918Switchgrass RhizosphereVRSDPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0207657_1034017823300025919Corn RhizosphereMQEDTPYDAEGRVEVPGAPGWAYRSIHGAGGDALSVEMTGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA
Ga0207652_1002117373300025921Corn RhizosphereDAEGRVEVPGAPGWSYSSIGGAGGHALSVEMAGPDDAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA
Ga0207681_1171580023300025923Switchgrass RhizosphereVRSDPEREFDASPYDAEGRVGVPGADGWRYLPIHPDGGDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0207694_1003818823300025924Corn RhizosphereVQDDTPYDAEGRVEVPGAPGWAYRSIHGAGGDALSVEMTGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA
Ga0207694_1031796913300025924Corn RhizosphereVRTDPEREFDASPYDEEGRVGVPGADGWRYLPIRPAGEDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0207650_1179485323300025925Switchgrass RhizosphereMDAGTEHRGDASPYDEQGRIEVPGAAGWRYLPMAPASEDTLAVTLAGPDDVHVSFTVPDFVSRGEELGEIARLVIRARERMDRSAGLGA
Ga0207687_1003673633300025927Miscanthus RhizosphereMQDDTPYDAEGRVEVPGAPGWAYRSIHGAGGDAISVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA
Ga0207664_1081401823300025929Agricultural SoilVDRPPQQPAADSPYDAGGRVDVPDAPGWQYLGIHGDDGDALAVEMAGPDDVRVAFSVPDFLSRGDELGEVARIVIRAWERKERAAGLGA
Ga0207690_1011597613300025932Corn RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIHPDGGDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERM
Ga0207670_1108913213300025936Switchgrass RhizosphereVRSDPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQISFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0207704_1034508713300025938Miscanthus RhizosphereSDPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0207689_1124356123300025942Miscanthus RhizosphereMQDDTPYDAEGRVEVPGAPGWAYRSIHGAGGDAISVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAW
Ga0207661_1003086333300025944Corn RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGQDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0208530_100897223300026009Rice Paddy SoilMDAGTERDRDASPFDEQGRVDVPGAPGWRYLPISPSGNDSLAVTVAGPEDVRLSFTVPGFLSRGDELGEVTRVVIRAWERMDRASGLGA
Ga0207703_1052826523300026035Switchgrass RhizosphereVRSDPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGQDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0207702_1059961023300026078Corn RhizosphereMHDDTPYDADGRVEVPGAPGWAYRSIHGAGGDALSVEMAGPDDAHVTFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA
Ga0207702_1102664813300026078Corn RhizosphereEFDASPYDAEGRVGVPGADGWRYLPIRPAGEDTLHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0207676_1072728833300026095Switchgrass RhizosphereVRADPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGDDALHVTLAGPDDVQISFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0207674_1158391723300026116Corn RhizospherePPGYEPGMQDDTPYDAEGRVEVPGAPGWAYRSIHGAGGDALSVEMTGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA
Ga0207698_1075271413300026142Corn RhizosphereVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDAQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGLGA
Ga0209178_108275923300027725Agricultural SoilVQDDTPYDAEGRVEVPGAPGWAYSSIHGAGGDALSVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA
Ga0268266_1079470523300028379Switchgrass RhizosphereVQDDTPYDAEGRVEVPGAPGWAYRSIHGAGGDALSVEMAGPDDAQVAFTVPDFLSRGDELGEVARVVIRAWERTVRAAGLGA
Ga0307321_109936823300028704SoilMDARPDPVAGRAPYDAEGGIAVPDAPGWRYLTIEPGEDASISVTLAGPDGANAGFTVPAFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0307316_1016566013300028755SoilRPDPVAGRAPYDAEGGIAVPDAPGWRYLTIEPGEDASISVTLAGPDGANAGFTVPAFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0307282_1010144013300028784SoilARPDPVAGRAPYDAEGGIAVPDAPGWRYLTIEPGEDASISVTLAGPDGANAGFTVPAFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0307287_1010588733300028796SoilMDARPDPVAGRAPYDAEGGIAVPDAPGWRYLTIEPGEDASISVTLAGPDGANAGFTVPAFLSRGDELGEVARIVIRAWERM
Ga0307289_1040249823300028875SoilMGGSSEHSGGDEPYDAQGHVGVPGAPEWTYLSIGGHADDGLAVELEGPDDARVAFVVPKFLSRGDEIGEVARVVIRAWERTVRAAGVGG
Ga0247826_1121437713300030336SoilVNDARGSEGADRSPYDGDGGISVPNAAGWRYLLIAPDGDDTIAVTLEGPDRARVRFTAPAFLSRGEELGEVARIVIRARDRMD
Ga0308203_103426113300030829SoilGRAPYDAEGGIAVPDAPGWRYLTIEPGEDASISVTLAGPDGANAGFTVPAFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0308202_105374513300030902SoilPVAGRAPYDAEGGIAVPDAPGWRYLTIEPGEDASISVTLAGPDGANAGFTVPAFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0308206_113768823300030903SoilAGRAPYDAEGGIAVPDAPGWRYLTIEPGEDASISVTLAGPDGANAGFTVPAFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0308201_1011807023300031091SoilSPVDDGGTIAVPGAPGWRYLPIEPDGEDSLAVTLDGPDDARVTFSVPTFLSRGAELGEVARVVIRAWERMDRSAGLGA
Ga0308201_1026932413300031091SoilHARDSSPYDDEGRIEVPDAPGWRYLPIAPTGDDALAVTVTGPDDVRVSFTVPGFLSRGDELGEVTRIVIRAWERMDRASGLGA
Ga0307468_10228187513300031740Hardwood Forest SoilSRSHAPTPPGPSLWDEAAVGESRELPADESPYDAEGRVSVPGAPEWRYLSIRGGADHALTVELQGPDDAQVAFTVPDFLGRGDEIGEVARVVIRAWERTERAAGVGG
Ga0308175_10015669843300031938SoilVRADPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGGDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0308175_10258530213300031938SoilMDAGTEHRGDASPYDEQGRIEVPGATGWRYLPIEPAGEDALAVTLAGPDDVHVSFMVPDFVSRGEELGEIARLVIRARERMDRSAGLGA
Ga0308174_1153448723300031939SoilVRAGPEREFDASPYDAEGRVGVPGADGWRYLPIRPAGGDALHVTLAGPDDVQIGFTVPDFLSRGDELGEVARIVIRAWERMDRASGLGA
Ga0308174_1159131423300031939SoilMQEDTPYDAEGRVEVPGAPGWSYSSIGGAGGDALSVEMAGPDDTQVTFTVPDFLSRGDELGEVARVVIRAWERTVRSAGL
Ga0308173_1040681923300032074SoilMDVGTEQRGDASPYDEQGRIEVPGAAGWRYLPIEPAGEDALAVTLAGPDDVHVGFTVPDFVSRGEELGEIARLVIRARERMDRSAGLGA
Ga0310811_1104378413300033475SoilWRRHHGGTRRAMDAGTEHRGDASPYDEQGRIEVPGATGWRYLPIEPAGEDALAVTLAGPDDVHVGFTVPDFVSRGEELGEIARLVIRARERMDRSAGLGA
Ga0247829_1075852423300033550SoilVNSAPRTESADRSPYDADGAIGVPDATGWRYLQIEPDGDDTIAVTLDGPERTRIRFTVPAFLSRGEELGEVARIVIRARDRMDRSAGLGA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.