NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F030521

Metagenome Family F030521

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F030521
Family Type Metagenome
Number of Sequences 185
Average Sequence Length 53 residues
Representative Sequence KATPGAPAVVAMTLFHTPEAAAAASRAGADALVGKESFVKGLSQALARLFP
Number of Associated Samples 163
Number of Associated Scaffolds 185

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.19 %
% of genes near scaffold ends (potentially truncated) 87.03 %
% of genes from short scaffolds (< 2000 bps) 86.49 %
Associated GOLD sequencing projects 151
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (82.162 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.595 % of family members)
Environment Ontology (ENVO) Unclassified
(34.054 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(37.838 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 43.04%    β-sheet: 0.00%    Coil/Unstructured: 56.96%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 185 Family Scaffolds
PF01042Ribonuc_L-PSP 24.32
PF13432TPR_16 18.92
PF13428TPR_14 15.14
PF03704BTAD 9.19
PF13185GAF_2 8.65
PF00072Response_reg 6.49
PF13414TPR_11 3.78
PF00989PAS 2.16
PF13181TPR_8 2.16
PF13188PAS_8 1.08
PF08448PAS_4 0.54
PF01040UbiA 0.54
PF17191RecG_wedge 0.54
PF00158Sigma54_activat 0.54
PF00271Helicase_C 0.54
PF02653BPD_transp_2 0.54
PF08529NusA_N 0.54
PF00905Transpeptidase 0.54

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 185 Family Scaffolds
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 24.32
COG3629DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domainTranscription [K] 9.19
COG3947Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domainsTranscription [K] 9.19

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms82.16 %
UnclassifiedrootN/A17.84 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000891|JGI10214J12806_11889899All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria951Open in IMG/M
3300002223|C687J26845_10176559All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria762Open in IMG/M
3300002558|JGI25385J37094_10043869All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1527Open in IMG/M
3300004022|Ga0055432_10087539Not Available802Open in IMG/M
3300004114|Ga0062593_101689069All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria691Open in IMG/M
3300004479|Ga0062595_101285237All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria657Open in IMG/M
3300004643|Ga0062591_100139928All Organisms → cellular organisms → Bacteria1664Open in IMG/M
3300005167|Ga0066672_10379376All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria924Open in IMG/M
3300005167|Ga0066672_10866053All Organisms → cellular organisms → Bacteria → Proteobacteria562Open in IMG/M
3300005167|Ga0066672_10866054All Organisms → cellular organisms → Bacteria → Proteobacteria562Open in IMG/M
3300005174|Ga0066680_10249310All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1128Open in IMG/M
3300005294|Ga0065705_10216990All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1338Open in IMG/M
3300005295|Ga0065707_10112488All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_142359Open in IMG/M
3300005330|Ga0070690_100328846All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1104Open in IMG/M
3300005330|Ga0070690_101639529All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300005356|Ga0070674_100665324All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria886Open in IMG/M
3300005434|Ga0070709_11490438All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300005436|Ga0070713_100271159All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1554Open in IMG/M
3300005436|Ga0070713_102131170Not Available543Open in IMG/M
3300005438|Ga0070701_10468985All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300005441|Ga0070700_101510342All Organisms → cellular organisms → Bacteria → Proteobacteria571Open in IMG/M
3300005444|Ga0070694_100761060All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300005445|Ga0070708_101278090All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria686Open in IMG/M
3300005447|Ga0066689_11011516All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300005459|Ga0068867_102419906All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005546|Ga0070696_100639975All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300005555|Ga0066692_10543153All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria736Open in IMG/M
3300005559|Ga0066700_10671581All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria714Open in IMG/M
3300005561|Ga0066699_10478152All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae891Open in IMG/M
3300005842|Ga0068858_100385292All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1345Open in IMG/M
3300005876|Ga0075300_1033555All Organisms → cellular organisms → Bacteria → Proteobacteria698Open in IMG/M
3300006046|Ga0066652_101606102All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300006046|Ga0066652_102041525All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300006173|Ga0070716_101817480All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300006755|Ga0079222_11237944All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria673Open in IMG/M
3300006846|Ga0075430_100210556All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1613Open in IMG/M
3300006847|Ga0075431_101639011All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300006852|Ga0075433_11367996All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria613Open in IMG/M
3300006894|Ga0079215_10853317All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300006918|Ga0079216_11783073All Organisms → cellular organisms → Bacteria → Proteobacteria528Open in IMG/M
3300007004|Ga0079218_10267410All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1363Open in IMG/M
3300007004|Ga0079218_10999850All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300007004|Ga0079218_11026241All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300007258|Ga0099793_10434208All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria648Open in IMG/M
3300009098|Ga0105245_11657702All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria691Open in IMG/M
3300009100|Ga0075418_12697359All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300009147|Ga0114129_10618832All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1401Open in IMG/M
3300010036|Ga0126305_10954599All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300010364|Ga0134066_10174693All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300010399|Ga0134127_10106203All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2471Open in IMG/M
3300010403|Ga0134123_11773076All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Thermithiobacillaceae → Thermithiobacillus → Thermithiobacillus tepidarius670Open in IMG/M
3300010403|Ga0134123_13579995Not Available504Open in IMG/M
3300011398|Ga0137348_1011387All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1339Open in IMG/M
3300011403|Ga0137313_1002127All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria4487Open in IMG/M
3300011438|Ga0137451_1132312All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300011993|Ga0120182_1013038All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria655Open in IMG/M
3300012015|Ga0120187_1062656All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300012189|Ga0137388_10943254All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria797Open in IMG/M
3300012208|Ga0137376_10475281All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1085Open in IMG/M
3300012225|Ga0137434_1077460All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300012231|Ga0137465_1098280All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria878Open in IMG/M
3300012362|Ga0137361_10413509All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1239Open in IMG/M
3300012685|Ga0137397_10545969All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria863Open in IMG/M
3300012899|Ga0157299_10247653All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria563Open in IMG/M
3300012901|Ga0157288_10279876All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria574Open in IMG/M
3300012909|Ga0157290_10487806Not Available500Open in IMG/M
3300012918|Ga0137396_10596609All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria817Open in IMG/M
3300012927|Ga0137416_12249737All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300012944|Ga0137410_10773577All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300012944|Ga0137410_10926040All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria738Open in IMG/M
3300012951|Ga0164300_10851343All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300012958|Ga0164299_11415036All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46538Open in IMG/M
3300012988|Ga0164306_10464368All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria966Open in IMG/M
3300014871|Ga0180095_1082226All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria594Open in IMG/M
3300014878|Ga0180065_1008112Not Available2026Open in IMG/M
3300015053|Ga0137405_1193978All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria956Open in IMG/M
3300015245|Ga0137409_10933691All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300015245|Ga0137409_11312324All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300015256|Ga0180073_1127082All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300015374|Ga0132255_103956977All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria629Open in IMG/M
3300017966|Ga0187776_11285737All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria552Open in IMG/M
3300018061|Ga0184619_10363845All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria659Open in IMG/M
3300018431|Ga0066655_10609000All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria736Open in IMG/M
3300018466|Ga0190268_11906146All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300018469|Ga0190270_13305339Not Available511Open in IMG/M
3300018476|Ga0190274_10767810All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1017Open in IMG/M
3300018482|Ga0066669_11583486All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300019377|Ga0190264_10113056All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1308Open in IMG/M
3300019884|Ga0193741_1038192All Organisms → cellular organisms → Bacteria1239Open in IMG/M
3300020215|Ga0196963_10442388All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria585Open in IMG/M
3300021066|Ga0196980_1053093All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300024182|Ga0247669_1019996All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1164Open in IMG/M
3300024284|Ga0247671_1039807All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria727Open in IMG/M
3300024330|Ga0137417_1055617All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1158Open in IMG/M
3300024330|Ga0137417_1503096All Organisms → cellular organisms → Bacteria2013Open in IMG/M
3300025155|Ga0209320_10386171Not Available565Open in IMG/M
3300025535|Ga0207423_1042834Not Available789Open in IMG/M
3300025567|Ga0210076_1039240Not Available1020Open in IMG/M
3300025580|Ga0210138_1157876All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium557Open in IMG/M
3300025917|Ga0207660_10910638All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria718Open in IMG/M
3300025921|Ga0207652_11894228All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300025927|Ga0207687_10965963All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria730Open in IMG/M
3300025934|Ga0207686_10741536All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria783Open in IMG/M
3300025936|Ga0207670_10303648All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1250Open in IMG/M
3300025938|Ga0207704_10583096All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria913Open in IMG/M
3300026035|Ga0207703_10285541All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1500Open in IMG/M
3300026067|Ga0207678_10764633All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria852Open in IMG/M
3300026075|Ga0207708_10938810All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria750Open in IMG/M
3300026075|Ga0207708_11251186All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300026118|Ga0207675_102213486All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria565Open in IMG/M
3300026277|Ga0209350_1069779All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria981Open in IMG/M
3300026306|Ga0209468_1194615All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300026335|Ga0209804_1033532All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2589Open in IMG/M
3300026335|Ga0209804_1278877All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300026528|Ga0209378_1202195All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria656Open in IMG/M
3300026542|Ga0209805_1019767All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3535Open in IMG/M
3300026873|Ga0207620_1009772All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia682Open in IMG/M
3300027378|Ga0209981_1034881All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria744Open in IMG/M
3300027526|Ga0209968_1020408Not Available1071Open in IMG/M
3300027573|Ga0208454_1046950All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1003Open in IMG/M
3300027614|Ga0209970_1020318All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1122Open in IMG/M
3300027655|Ga0209388_1080957All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300027657|Ga0256865_1107655All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria715Open in IMG/M
3300027818|Ga0209706_10279111All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales795Open in IMG/M
3300027840|Ga0209683_10449488All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300027882|Ga0209590_10249752All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1132Open in IMG/M
3300027886|Ga0209486_10539806All Organisms → cellular organisms → Bacteria → Proteobacteria731Open in IMG/M
3300027907|Ga0207428_10240173All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1354Open in IMG/M
3300027909|Ga0209382_10872614All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria950Open in IMG/M
3300028145|Ga0247663_1014383All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1141Open in IMG/M
3300028145|Ga0247663_1089213All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria555Open in IMG/M
3300028244|Ga0247714_104309All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria666Open in IMG/M
3300028293|Ga0247662_1009267Not Available1539Open in IMG/M
3300028381|Ga0268264_12371422All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300028596|Ga0247821_11001339All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300028608|Ga0247819_10101279Not Available1443Open in IMG/M
3300028809|Ga0247824_10490644All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria723Open in IMG/M
3300028812|Ga0247825_10508945All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria857Open in IMG/M
3300028889|Ga0247827_10131655All Organisms → cellular organisms → Bacteria → Proteobacteria1303Open in IMG/M
3300030606|Ga0299906_10046987All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3440Open in IMG/M
3300030619|Ga0268386_10253244All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_141294Open in IMG/M
3300030620|Ga0302046_10269015All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1402Open in IMG/M
3300031170|Ga0307498_10038831Not Available1224Open in IMG/M
3300031184|Ga0307499_10046981All Organisms → cellular organisms → Bacteria1044Open in IMG/M
(restricted) 3300031197|Ga0255310_10179846All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300031199|Ga0307495_10076435All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria747Open in IMG/M
3300031226|Ga0307497_10022020All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_141980Open in IMG/M
3300031228|Ga0299914_11579564Not Available509Open in IMG/M
3300031716|Ga0310813_11026707All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria753Open in IMG/M
3300031852|Ga0307410_11665521All Organisms → cellular organisms → Bacteria → Proteobacteria565Open in IMG/M
3300031911|Ga0307412_10419753All Organisms → cellular organisms → Bacteria → Proteobacteria1094Open in IMG/M
3300031944|Ga0310884_10762464All Organisms → cellular organisms → Bacteria → Proteobacteria589Open in IMG/M
3300031965|Ga0326597_11514401All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria644Open in IMG/M
3300031995|Ga0307409_100616625All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1074Open in IMG/M
3300032004|Ga0307414_12328148Not Available500Open in IMG/M
3300032126|Ga0307415_101606611All Organisms → cellular organisms → Bacteria → Proteobacteria625Open in IMG/M
3300032126|Ga0307415_102412106All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300032144|Ga0315910_10724142All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria773Open in IMG/M
3300032144|Ga0315910_11310453Not Available565Open in IMG/M
3300032157|Ga0315912_11604953All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300032179|Ga0310889_10159076All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1017Open in IMG/M
3300032205|Ga0307472_100145033All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1723Open in IMG/M
3300032205|Ga0307472_100551214All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1006Open in IMG/M
3300032205|Ga0307472_101440832All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria670Open in IMG/M
3300032205|Ga0307472_102643361All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300033551|Ga0247830_10644955All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria839Open in IMG/M
3300034149|Ga0364929_0256023All Organisms → cellular organisms → Bacteria → Proteobacteria590Open in IMG/M
3300034819|Ga0373958_0053804All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria856Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.59%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.65%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.03%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.86%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.32%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.78%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.70%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.16%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.16%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.16%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.16%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.16%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.16%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.62%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.62%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.08%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial1.08%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.08%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.08%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.08%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil1.08%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.08%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.08%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.54%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.54%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.54%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.54%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.54%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.54%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.54%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.54%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.54%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.54%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.54%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.54%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.54%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.54%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.54%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002223Soil microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_1.2EnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300004022Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005876Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011398Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2EnvironmentalOpen in IMG/M
3300011403Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300011993Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep1EnvironmentalOpen in IMG/M
3300012015Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep1EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012225Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2EnvironmentalOpen in IMG/M
3300012231Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2EnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300014868Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10DEnvironmentalOpen in IMG/M
3300014871Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1DaEnvironmentalOpen in IMG/M
3300014878Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10DEnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015256Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10DEnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019884Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2EnvironmentalOpen in IMG/M
3300020215Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5EnvironmentalOpen in IMG/M
3300021066Soil microbial communities from Anza Borrego desert, Southern California, United States - S3_10-13CEnvironmentalOpen in IMG/M
3300024182Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10EnvironmentalOpen in IMG/M
3300024284Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025155Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4EnvironmentalOpen in IMG/M
3300025535Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025567Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025580Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026873Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027378Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027526Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027573Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)EnvironmentalOpen in IMG/M
3300027614Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027657Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeqEnvironmentalOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028145Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04EnvironmentalOpen in IMG/M
3300028244Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-4-W_DEnvironmentalOpen in IMG/M
3300028293Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI10214J12806_1188989913300000891SoilPAVVAMTLFHTPEAAAAASRAGADALVGKESFITGLSQALKRLFP*
C688J14111_1003289613300001305SoilAPARGLELLRRVTLLPAAPAVVAMTLFRSPEGAAAAIDAGAVGLVGKDGFVSDLTQLLARLFPAGVTA*
C687J26845_1017655933300002223SoilLFHTPETLAAAKRAGADALVCKESFVAGLGDALASLFPA*
JGI25385J37094_1004386913300002558Grasslands SoilAVVAMTLFHTPEAAAQARRAGADALVGKEAFISGLTDALARLFPA*
Ga0055432_1008753923300004022Natural And Restored WetlandsAVVAMTLFHSPEAAAAAVAAGAVGLVGKDGFVAGLTQLLARLFPQEISA*
Ga0062593_10168906913300004114SoilGGPAVVAMTLFHTPEAAAEARRAGADALVGKEAFVAGLNQALEHLFPVAR*
Ga0063455_10081011513300004153SoilGAAPARGLELLRRVTLLPAAPAVVAMTLFRSPEGAAAAIDAGAVGLVGKDGFVSDLTQLLARLFPAGVTA*
Ga0062595_10128523713300004479SoilRAAPAVVALALFKTPGALAAAKRAGADELVGKESFISGLAQALGRLFPSAS*
Ga0062591_10013992843300004643SoilTPGAPAVVALALFHTPEAVAAAKRAGADALVGKESFVAGLRQALANIFPARV*
Ga0066672_1037937633300005167SoilLFETPEALAAAKRAGADELVGKESFISGLAQVLGRLFPAVS*
Ga0066672_1086605323300005167SoilGLDMVRRVKACPSAPAVVAMTLFHTPEAAAEATRAGADALVGKEAFISGLTDALARLFPA
Ga0066672_1086605423300005167SoilGLDMVRRVKACPSAPAVVAMTLFHTPEAAAEATRAGADALVGKEAFVSGLADALARLFPA
Ga0066809_1016269123300005168SoilARGLELLRRVTALPAAPAVVAMMLFRSPEAAAAAIDAGAVGLVGKDGFVSDLTQLLARLFPAEITA*
Ga0066680_1024931043300005174SoilGPKRGLELVQRVKAVPAAPAVVALALFDTPEALAAAKRAGADELVGKERFIAGLSQALARLFPSAS*
Ga0065705_1021699043300005294Switchgrass RhizosphereVVAMTLFHTPEAAAAANKAGADALVGKESFVHGLSQFLARLFP*
Ga0065707_1011248813300005295Switchgrass RhizosphereAVVAMTLFHSPEAAAAAIDAGAVGLVGKDGFVAGLTQLLARLFPAEITA*
Ga0070690_10032884643300005330Switchgrass RhizosphereVAMTLFHTPEAAAAANKAGADALVGKESFVKGLSQALARLFP*
Ga0070690_10163952913300005330Switchgrass RhizosphereDLVKQVKATPAAPAIVALALFDTPEALAAARRAGADELVGKERFIAGLSQALERLFPAAA
Ga0066388_10413637623300005332Tropical Forest SoilPAAPVVVAMTLFRSPEAAAAAVDAGAVGLVGKDGFVSDLTQLLARLFPAEITA*
Ga0070674_10066532413300005356Miscanthus RhizosphereVAMTLFHTPEAAAAANKAGADALVGKESFVHGLSQVLARLFP*
Ga0070709_1149043823300005434Corn, Switchgrass And Miscanthus RhizosphereLVQQVKATASAPAVVGLSLFDTPEAAAAARRAGADELVGKESFISGLSAVLARLFPAAS*
Ga0070713_10027115913300005436Corn, Switchgrass And Miscanthus RhizospherePKRGMELVQQVKSAPGAPAVVALSLFDTPEAQTAAKRAGADELVGKESFISGLSAVLARLFPAAS*
Ga0070713_10213117013300005436Corn, Switchgrass And Miscanthus RhizosphereVKAVPAAPLIVALSLFYTPEALAAVQRAGADDLVGKERFIAGLSRVFARLFPGVA*
Ga0070701_1046898533300005438Corn, Switchgrass And Miscanthus RhizosphereKQVKAAPHAPAVVAMTLFHTPEAAAAANKAGADALVGKESFVKGLSQALARLFP*
Ga0070700_10151034223300005441Corn, Switchgrass And Miscanthus RhizosphereLGLAPKRALEIVRRVKQQPSAPAIVALALFHTPETVALAKRAGADALVGKESFVHGLRQALQNLFPAAA*
Ga0070694_10076106033300005444Corn, Switchgrass And Miscanthus RhizosphereLGMAPNRGLELVQQVKACRAAPAVVALALFKTPGALAAAKRAGADELVGKESFISGLAQALGRLFPSAS*
Ga0070694_10136096223300005444Corn, Switchgrass And Miscanthus RhizosphereLRRVRALPAAPAVVAMTLFHSPEAAAAAVDAGAVGLLGKDGFVSGLTQILAGLFPAEIAA
Ga0070708_10127809013300005445Corn, Switchgrass And Miscanthus RhizosphereVVALALFKTPGALAAAKRAGADELVGKESFISGLAQALGRLFPSAS*
Ga0066689_1101151623300005447SoilLGLGLSPARGLDMVRRVKACPGAPAVVAMTLFHTPEAVAQARRAGADALVGKEAFISGLTDALARLFPA*
Ga0068867_10241990623300005459Miscanthus RhizosphereAPAVVAVTLFDTPEAAAAAKLAGADELVGKVSFISGLARALARLFPSAA*
Ga0070696_10063997533300005546Corn, Switchgrass And Miscanthus RhizosphereKRLKAEPGAPAVFAMTLFHTPEAAAAAERAGADALVGKESFVSGLSQALARLFP*
Ga0070704_10198465013300005549Corn, Switchgrass And Miscanthus RhizosphereVRALPAAPAVVAMTLFHSPEAAAAAVDAGAVGLLGKDGFVSGLTQILAGLFPAEIAA*
Ga0066692_1054315313300005555SoilAAPAVVALALFDTPEALAAAKRAGADELVGKERFIAGLSQALARLFPSAS*
Ga0066700_1067158133300005559SoilDTPEALAAAKRAGADELVGKERFIAGLSQALARLFPSAS*
Ga0066699_1047815213300005561SoilPSAPAIVALALFHTPATLAAAKRAGADALVGKESFITGLSLALARLFPAA*
Ga0068870_1013343713300005840Miscanthus RhizosphereAAPAVVAMTLFRSPEAAAAAIDAGAVGLVGKDGFVSDLTQLLARLFPSEITA*
Ga0068858_10038529243300005842Switchgrass RhizosphereVAMTLFHTPEAAAEARRAGADALVGKEAFVAGLNQALERLFPAAR*
Ga0075300_103355513300005876Rice Paddy SoilRKGLDLVRQFKAAPSAPLIVALSLFHTPQALAAARRAGADELVGKESFIAGLSQAFARLFPGAA*
Ga0066652_10160610223300006046SoilLLLGLGLSPARGLDMVRRVKACPGAPAVVAMTLFHTPEAAAQARRAGADALVGKEAFVSGLTDALARLFPA*
Ga0066652_10204152523300006046SoilLLLGLGLSPARGLDMVRRVKACPGAPAVVAMTLFHTPEAVAQARRAGADALVGKEAFISGLTDALARLFPA*
Ga0070716_10181748013300006173Corn, Switchgrass And Miscanthus RhizosphereTPEALAAAKRAGADALVGKVSFISSLSLVLAQLFPAAS*
Ga0079222_1123794433300006755Agricultural SoilVIVALSLFYTPQALAAARRAGADELVGKESFMAGLSQAFARLFPGDA*
Ga0079220_1122004523300006806Agricultural SoilPAAPVVVAMTLFRSPEAAAAAVDAGAVGLVGKEGFVSDLTQLLARLFPAEITA*
Ga0075430_10021055613300006846Populus RhizosphereVAMTLFHTPEAAAAARRAGADALVGKESFVHGLRQALARLFP*
Ga0075431_10163901113300006847Populus RhizosphereARGLEMVKRVKAEPGAPAVVAMTLFHTPEADAAASRAGADALVGKETFVTGFSQALARLFP*
Ga0075433_1136799633300006852Populus RhizosphereVALALFHTPEAVAAAKRAGADALVGKESFVAGLRQALSSIFPVRP*
Ga0079215_1085331733300006894Agricultural SoilRSLPGAPAVVAMTLFHSAEAAAAAIEAGAVGLIGKDAFVSGLTQILARVFRA*
Ga0079216_1178307313300006918Agricultural SoilKAGPRPPTVVAMTLFHTPEAAAAATRAGADALVGKERFVAGLRAALARLFP*
Ga0079218_1026741013300007004Agricultural SoilHTPEAAAAASRAGADALVGKESFVKGLSQALARLFP*
Ga0079218_1099985013300007004Agricultural SoilKATPGAPAVVAMTLFHTPEAAAAASRAGADALVGKESFVKGLSQALARLFP*
Ga0079218_1102624133300007004Agricultural SoilGKSPVRGLEMVKQVKATPGAPAVVAMTLFHTPEADAAATRAGADALVGKESFIAGLSQALKRLFP*
Ga0099793_1043420813300007258Vadose Zone SoilVKACPGAPAVVAMTLFHTPEAAAEATRAGADALVGKEAFISDLVDALARLFPA*
Ga0105245_1165770213300009098Miscanthus RhizosphereLFHTPEAVAAAKRAGADALVGKESFVSGLRQALANIFPARV*
Ga0075418_1269735913300009100Populus RhizosphereSPPARGLEMVKRVKAEPGAPAVVAMTLFHTPEADAAASRAGADALVGKETFVTGFSQALARLFP*
Ga0114129_1061883213300009147Populus RhizosphereTPEAVAAAKRAGADALVGKESFVSGLRQALANIFPARA*
Ga0105248_1007113713300009177Switchgrass RhizosphereLPAAPAVVAMTLFRSPEAAAAAIDAGAVGLVGKDGFVSDLTQLLARLFPSEITA*
Ga0126305_1095459913300010036Serpentine SoilFLRRLKKLPGGPAVVAMTLFHTPEAAAEARRAGADALVGKEAFVAGLNQALAQLFPSA*
Ga0134066_1017469323300010364Grasslands SoilLRHFRRQGALELVRRVKATPGAPAVVALALFHTPEAVAAAKHAGADALVGKESFVAGLRQALANIFPARL*
Ga0134127_1010620313300010399Terrestrial SoilPEAAAAANKAGADALVGKESFVKGLSQALARLFP*
Ga0134123_1177307623300010403Terrestrial SoilMKTPIQTRDAPEAAAAAERAGADALVSKESFISGLSQALARLFP*
Ga0134123_1357999523300010403Terrestrial SoilHTPEAAAAANKAGADALVGKESFVKGLSQALSRLFP*
Ga0137348_101138743300011398SoilPGAPAVVAMTLFHTPEAAAAASRAGADALVGKESFVPGLRDALARLFP*
Ga0137313_100212773300011403SoilVKAEPGAPAVVAMTLFHTPEAAAAASRAGADALVGKESFVAGLRDALARLFP*
Ga0137451_113231223300011438SoilAAAEARRAGADALVGKEAFVSGLNQALAKLFPAAA*
Ga0120182_101303833300011993TerrestrialKAAARPPRVVAMTLFHTPQAAAAAARAGADALIGKERFVVGLRDALARLFP*
Ga0120187_106265613300012015TerrestrialVVAMTLFHTPEAAAAASCAGADALVGKESFVAGLRDALARLFP*
Ga0137388_1094325433300012189Vadose Zone SoilLELLQQVKASPAAPTVVALALFDTPEALAAAKRAGADELVGKVSFISGLARVLGRLFPAAS*
Ga0137376_1047528113300012208Vadose Zone SoilVLLLGLGLSPARGLDMVRRVKACPGAPAVVAMTLFHTPEAVAQARRAGADALVGKEAFISGLTDALARLFPA*
Ga0137434_107746033300012225SoilPEAAAAASRAGADALVGKESFVAGLRDALARLFP*
Ga0137465_109828023300012231SoilMTLFHTPEAAAAASKAGADALVGKESFVKGLSQALARLFP*
Ga0137361_1041350943300012362Vadose Zone SoilGLGPKRGMELVQRVKAAPTAPAIVALALFDTPEALAAAKRAGADELVGKERFIAGLSQALARLFPTAA*
Ga0137397_1054596933300012685Vadose Zone SoilLSPGRGLDMVRRVKACPGAPAVVAMTLFHTPEAAAEATRAGADALVGKEAFIAGLTDALARLFPA*
Ga0157299_1024765333300012899SoilLFHTPEAAAAANKAGADALVGKESFVKGLSQALARLFP*
Ga0157288_1027987613300012901SoilPAVVAMTLFHTPEAAAAANKAGADALVGKESFVKGLSQALARLFP*
Ga0157288_1031393723300012901SoilALPAAPAVVAMTLFRSPEAAAAAIDAGAVGLVGKDGFVSDLTQLLARLFPAEITA*
Ga0157290_1048780613300012909SoilTPEAAAEARRAGADALVGKEAFVAGLNQALAQLFPSA*
Ga0137396_1059660933300012918Vadose Zone SoilGLDMVRRVKACPGAPAVVAMTLFHTPEAAAEATRAGADALVGKEAFISDLVDALARLFPA
Ga0137416_1224973723300012927Vadose Zone SoilAMTLFHTPEAAAEATRAGADALVGKEAFVSGLADALARLFPA*
Ga0137410_1077357713300012944Vadose Zone SoilAAEARRAGADALVGKEAFVAGLNQALAKLFPTAG*
Ga0137410_1092604033300012944Vadose Zone SoilALALFHTPETVAAAKRAGADALVGKESFVAGLRQALSTLFPAAA*
Ga0164300_1085134323300012951SoilVRRLKALPGGPAGVAMTLLHTPEAAAEARRAGADALVGKEAFVAGLNQALERLFPAAR*
Ga0164299_1141503623300012958SoilMNTPPAVVAMTLFHTPEAAAEARRAGADALVGKEAFVVGLNQALAQLFPAV*
Ga0164304_1022483313300012986SoilLRRVTALPAAPAVVAMMLFRSPEAAAAAIDAGAVGLVGKDGFVSDLTQLLARLFPAEITA
Ga0164306_1046436833300012988SoilALPGGPAVVAMTLFHTPEAAAEARRAGADALVGKEAFVAGLNQALERLFPAAR*
Ga0180088_104003123300014868SoilELLRRVRALPAAPAVVAMTLFHSPEAAAAAVDAGAVGLIGKDGFVTGLTQILAGLFPAEIPT*
Ga0180095_108222613300014871SoilAVVAMTLFHTPEAAAAASRAGADALVGKESFVAGLRDALARLFP*
Ga0180065_100811213300014878SoilLFHTPEAAAEARRAGADALVGKEAFVSGLNQALAKLFPAAA*
Ga0137405_119397813300015053Vadose Zone SoilNALPDVLLLGLGLSPARSLDIVRRVKACPGAPAVVAMTLFHTPEAAAEVRRAGADALVGKEAFVSGLTDALARLFPA*
Ga0137409_1093369123300015245Vadose Zone SoilGPAVVAMTLFHTPEAAAEARRAGADALVGKEAFVAGLNQALAKLFPTAG*
Ga0137409_1131232423300015245Vadose Zone SoilLLDLGLGPKRGMELVQRVKAAPAAPAVVALALFDTPEALAAAKRAGADELVGKERFIAGLSQALARLFPTAV*
Ga0180073_112708213300015256SoilMVKRVKAKPGAPAVVAMTLFHTPEAAAAAKRAGADALVGKESFIAGLRDALARLFP*
Ga0132255_10395697713300015374Arabidopsis RhizosphereQVKAAPHAPAVVAMTLFHTPEAAAAASKAGADALVGKESFVKGLSQALARLFP*
Ga0187776_1128573713300017966Tropical PeatlandPAALAAAKRAGADELVGKASFISGLVQALGRLFPAGS
Ga0184619_1036384513300018061Groundwater SedimentAPAVVAMTLFHTPEAAAQARRAGADALVGKEAFISGLTDALARLFPA
Ga0066655_1060900033300018431Grasslands SoilRAAPLVVALALFKTPEALAAAKRAGADELVGKASFISGLTQALGRLFPAAS
Ga0190268_1190614623300018466SoilLLDLGRSPARGLEMVKQVKAAPHAPAVVAMTLFHTPEAAAAARRAGADALVGKESFVHGLRQALARLFP
Ga0190270_1330533913300018469SoilMVKQVKAAPDAPAVVAMTLFHTPEAAAAASKAGADALVGKESFVKGLSQALARLFP
Ga0190274_1076781013300018476SoilPAVVAMTLFHTPEAAAAASKAGADALVGKESFVKGLSQALARLFP
Ga0066669_1158348613300018482Grasslands SoilVLLLGLGLSPARGLDMVRRVKACPGAPAVVAMTLFHTPEAAAQARRAGADALVGKEAFVSGLTDALARLFPA
Ga0190264_1011305643300019377SoilFHTPEAAAAASMAGADALVGKESFVKGLSQALARLFP
Ga0193741_103819243300019884SoilLGRSPARGLEMVKQVKSAPHAPAVVAMTLFHTPEAAAAASRAGADALVGKESFVKGLSQALARLFP
Ga0196963_1044238813300020215SoilALGPDVLLLDLGSQPARALEIVKQVKQKPGAPAVVAMTLFHTPEAAAAARRAGADALVGKESFVAGLRDALARLFP
Ga0196980_105309313300021066SoilGPHRGMDLLRQLKASPEAPTVVALTLFHTPETAAAVKRAGADALVAKETFITGLGDALAELFPA
Ga0247669_101999613300024182SoilLFDTPEAAAAARRAGADEMVGKESFISGLSAVLARLFPAAS
Ga0247671_103980713300024284SoilPEALAAARRAGADALVGKERFITGLSQAFEQLFPAAS
Ga0137417_105561723300024330Vadose Zone SoilMTLFHTPEAAAEATRAGADALVGKEAFVSGLADALARLFPA
Ga0137417_150309623300024330Vadose Zone SoilMTLFHTPEAAAQARRAGADALVGKEAFISGLTDALARLFPA
Ga0209320_1038617113300025155SoilSEGWTPETIAAARHAGADALVCKETFVAGLADALASLFPA
Ga0207423_104283413300025535Natural And Restored WetlandsAVVAMTLFHSPEAAAAAVAAGAVGLVGKDGFVAGLTQLLARLFPQEISA
Ga0210076_103924013300025567Natural And Restored WetlandsFHTPEAAAAASHAGADALVGKESFIAGLREALARLFP
Ga0210138_115787623300025580Natural And Restored WetlandsPEAVAAAKSAGADALVGKESFVAGLRQALASIFPARA
Ga0207645_1074791323300025907Miscanthus RhizosphereVRGLELLRRVTALPAAPAVVAMTLFRSPEAAAAAIDAGAVGLVGKDGFVSDLTQLLARFFPSEITA
Ga0207643_1045239023300025908Miscanthus RhizosphereLELLRRVTALPAAPAVVAMTLFRSPEAAAAAIDAGAVGLVGKDGFVSDLTQLLARLFPSEITA
Ga0207660_1091063833300025917Corn RhizosphereSKPDVLLLDLGLAPRRGLELVRKVMAAPAAPLIVALSLFYTPEALAAVRRAGADDLVGKERFIAGLSRALARLFPGAA
Ga0207652_1189422823300025921Corn RhizospherePDVLLLDLGLAPRRGLELVRRVKAGPAAPLVVALSLFHTPEALAAARRAGADELVGKERFISGLSQAFARLFPGAA
Ga0207687_1096596313300025927Miscanthus RhizosphereKAAPGAPAVVALALFHTPEAVAAAKRAGADALVGKESFVSGLRQALANIFPARV
Ga0207686_1074153633300025934Miscanthus RhizospherePNRALDLVRRVKAAPGAPAVVALALFHTPEAVAAAKRAGADALVGKESFVSGLRQALANIFPARV
Ga0207670_1030364813300025936Switchgrass RhizosphereALALFHTPEAVAAAKRAGADALVGKESFVAGLRQALANIFPAARA
Ga0207704_1058309613300025938Miscanthus RhizosphereAAPHAPAVVAMTLFHTPEAAAAASKAGADALVGKESFVKGLSQALARLFP
Ga0207711_1086421213300025941Switchgrass RhizosphereLPAAPAVVAMTLFRSPEAAAAAIDAGAVGLVGKDGFVSDLTQLLARLFPSEITA
Ga0207703_1028554113300026035Switchgrass RhizosphereDVLLLDLGRSPVRGLEMVKQVKAAPHAPAVVAMTLFHTPEAAAAASKAGADALVGKESFVKGLSQALARLFP
Ga0207639_1017963323300026041Corn RhizosphereGAAPVRGLELLRRVTALPAAPAVVAMTLFRSPEAAAAAIDAGAVGLVGKDGFVSDLTQLLARLFPSEITA
Ga0207678_1076463313300026067Corn RhizosphereEMVKQVKAAPHAPAVVAMTLFHTPEAAAAANKAGADALVGKESFVNGLSQVLARLFP
Ga0207708_1093881033300026075Corn, Switchgrass And Miscanthus RhizosphereVVAMTLFHTPEAAAAANKAGADALVGKESFVKGLSQALARLFP
Ga0207708_1125118623300026075Corn, Switchgrass And Miscanthus RhizosphereVSAARRAMDLGLMPSRGLELVRRVKATPRAPAVIALALFHAEETRAQAHDAGADALISKEAFVTGLAEVLPRLFPARVAA
Ga0207675_10221348613300026118Switchgrass RhizosphereLFHTPEAVAAAKRAGADALVGKESFVSGLRQALANIFPARV
Ga0209350_106977913300026277Grasslands SoilLLLGLGLSPARGLDMVRRVKACPGAPAVVAMTLFHTPEAAAQARRAGADALVGKEAFVSGLTDALARLFPA
Ga0209468_119461523300026306SoilSPARGLDMVRRVKACPGAPAVVAMTLFHTPEAAAQARRAGADALVGKEAFVSGLTDALARLFPA
Ga0209804_103353253300026335SoilVALALFETPEALAAAKRAGADELVGKESFISGLAQVLGRLFPAVS
Ga0209804_127887733300026335SoilKACPSAPAVVAMTLFHTPEAAAEATRAGADALVGKEAFVSGLTDALARLFPA
Ga0209378_120219513300026528SoilDMVRRVKACPGAPAVVAMTLFHTPEAAAQARRAGADALVGKEAFISGLTDALARLFPA
Ga0209805_101976753300026542SoilVVALALFETPEALAAPKRAGADELVGKESFISGLAQVLGRLFPAVS
Ga0207620_100977213300026873SoilDTPEAKAAARLAGADELVGKESFIAGLGRALARLFPGAG
Ga0209981_103488113300027378Arabidopsis Thaliana RhizosphereAMTLFHTPEAAAAASRAGADALVGKESFVAGLRDALARLFP
Ga0209968_102040813300027526Arabidopsis Thaliana RhizosphereRATRPAVVAMTLFHTPEAAAAASRAGADALVGKESFVAGLRDALARLFP
Ga0208454_104695043300027573SoilVALALFHTPEAVAAAKRAGADALVGKESFVAGLRQALASIFPVERV
Ga0209970_102031813300027614Arabidopsis Thaliana RhizosphereLGTVCGLETVRRVKAAARPPRVVAMTLFHTPQAAAAAARAGADALIGKERFVVGLRDALARLFP
Ga0209388_108095733300027655Vadose Zone SoilVRRVKACPGAPAVVAMTLFHTPEAAAQARRAGADALVGKEAFISGLTDALARLFPA
Ga0256865_110765513300027657SoilVIALALFHTPEAAAAVMRAGADALIGKDSFVVGLRQALAQLFSPARAA
Ga0209706_1027911113300027818Freshwater SedimentGAPAVVALALFHTPETLAAAKHAGADALVGKESFVAGLGDALASLFPA
Ga0209683_1044948823300027840Wetland SedimentKAAPHAPTVVAMTLFHTPEAAAAASKAGADALVGKESFVKGLSQALARLFP
Ga0209590_1024975213300027882Vadose Zone SoilLSPGCGLDMVRRVKACPGAPAVVAMTLFHTPEAAAEATRAGADALVGKEAFVAGLTDALARLFPA
Ga0209486_1053980633300027886Agricultural SoilLLDLGKSPVRGLEMVKQVKATPGAPAVVAMTLFHTPEADAAATRAGADALVGKESFIAGLSQALKRLFP
Ga0207428_1024017343300027907Populus RhizosphereVKAAPHAPAVVAMTLFHTPEAAAAANKAGADALVGKESFVKGLSQVLARLFP
Ga0209382_1087261413300027909Populus RhizosphereAAPRAPAIVAMTLFHTPEAAAAASKAGADALVGKESFVKGLSLALARLFP
Ga0247663_101438313300028145SoilRRALDLVRRLKDAPRAPAVVALALFHTPEALAAARRAGADALVGKERFITGLSQAFEQLFPAAS
Ga0247663_108921313300028145SoilAPGAPAVVALALFHTPEAVAAAKRAGADALVGKESFVSGLRQALANIFPARA
Ga0247714_10430933300028244SoilVVAMTLFHTHEAAAAAMGAGAHALVGKESFVPGLAQALAALFPA
Ga0247662_100926743300028293SoilALALFHTPEAVAAAKRAGADALVGKESFVSGLRQALANIFPARA
Ga0268264_1237142223300028381Switchgrass RhizosphereTPEAAAAASKAGADALVGKESFVNGLSQALARLFP
Ga0247821_1100133913300028596SoilLEMVKRVKSTPGAPAVVAMTLFHTPEAAAAASRAGADALVGKESFITGLSQALKRLFP
Ga0247819_1010127943300028608SoilKQVKAAPHAPAVVAMTLFHTPEAAAAANKAGADALVGKESFVNGLSQVLARLFP
Ga0247824_1049064413300028809SoilDLGTVCGLETVRRVKAAARPPRVVAMTLFHTPQAAAAAARAGADALIGKERFVVGLRDALARLFP
Ga0247825_1050894533300028812SoilALLAAPAIVAMTLFHTPEAAAAASRAGADALVGKESFVKGLSLALARLFP
Ga0247827_1013165543300028889SoilKSAVRGLEMVKRVKSTPGAPAVVAMTLFHTPEAAAAASRAGADALVGKESFITGLSQALKRLFP
Ga0299906_1004698713300030606SoilDLVRRVRSAPRAPAVIALALFHTPEAAAAVMRAGADALIGKDSFVVGLRQALAQLFPPARAA
Ga0268386_1025324423300030619SoilPVVVAMTLFHSREAAAAARHAGADGLVGKEAFVSGLTQILAALFPSKVAA
Ga0302046_1026901543300030620SoilVRLVKAGPRAPAVVALALFHTPETLAAAKRAGADALVGKESFVAGLGDALASLFPA
Ga0307498_1003883123300031170SoilFLRRLKALPGGPAVVAMTLFHTPEAAAEARRAGADALVGKEAFVAGLNQALAQLFPAAR
Ga0307499_1004698123300031184SoilAVVAMTLFHTPEAAAEARRAGADALVGKEAFVAGLNQALAKLFPTAG
(restricted) Ga0255310_1017984623300031197Sandy SoilQVKAAPHAPAVVAMTLFHTPEAAAAANKAGADALVGKESFVKGLSQALARLFP
Ga0307495_1007643533300031199SoilAAPGAPAVVALALFHTPEAVAAAKHAGADALVGKESFVSGLHQALANIFPVRA
Ga0307497_1002202013300031226SoilLFHTPEAAAEARRAGADALVGKEAFVVGLNQALAKLFPTAG
Ga0299914_1157956423300031228SoilLLDLGRAPQRSLELVRRVKASPKPPAIVALALFHTPETLAAARGAGADALVCKESFVAGLGAALASLFPA
Ga0310813_1102670713300031716SoilKAKPSAPAVVALALFHTPETVAAAKRAGADALVGKESFVVGLRQALQNLFPAAA
Ga0307410_1166552113300031852RhizosphereFHTPEAAAAASRAGADALVGKESFVKGLSQALARLFP
Ga0307412_1041975343300031911RhizosphereAMTLFHTPEAAAAASRAGADALVGKESFISGLSQALKRLFP
Ga0310884_1076246413300031944SoilGLETVRRVKAAARPPRVVAMTLFHTPQAAAAAARAGADALIGKERFVVGLRDALARLFP
Ga0326597_1151440133300031965SoilAVIALTLFHTPEAAAAVMCAGADALIGKDNFVAGLRQALAELFPPVLAA
Ga0307409_10061662543300031995RhizosphereRVKAEPGAPAVVAMTLFHTPEAAAAASRAGADALVGKESFVAGLRDALARLFP
Ga0307414_1232814823300032004RhizosphereLLLDLGSPPVRGLEMVKRVKAEPGAPAVVAMTLFHTPEAAAAASRAGADALVGKESFVAGLRDALARLFP
Ga0307415_10160661133300032126RhizosphereGLVPQRGLELVRRVKAGPRAPAVVALALFHTPETLAAAMGAGADALVGKETFVAGLGDALASLFPA
Ga0307415_10241210613300032126RhizosphereLDLGLAPNRALELVRRVKATPGAPAVVALALFHTPEAVAAAKRAGADALVGKESFVAGLRQALANIFPARV
Ga0315910_1072414233300032144SoilLDFLRRLKALPGGPAVVAMTLFHTPEAAAEARRAGADALVGKEAFVAGLSQALEQIFPTP
Ga0315910_1131045313300032144SoilLFHTPEAAAEARRAGADALVGKEAFVVGLNQALEQIFPSAR
Ga0315912_1160495323300032157SoilALPGGPAVVAMTLFHTPEAAAEARRAGADALVGKEAFVAGLNQALEQIFPAP
Ga0310889_1015907633300032179SoilVKQVKAAPHAPAVVAMTLFHTPEAAAAASKAGADALVGKESFVKGLSQALARLFP
Ga0310889_1057106113300032179SoilRRVTALPAAPAVVAMTLFHSPEAAAAAIDAGAVGLVGKDGFVAGLTQLLARLFPAEITA
Ga0307472_10014503343300032205Hardwood Forest SoilVALALFDTPEALAAARRAGADALVGKVRFIAGLSQAFAQLFPAAS
Ga0307472_10055121443300032205Hardwood Forest SoilATPGAPAVVALALFHTPEAVAAAKLAGADALVGKESFVAGLRQALATIFPARV
Ga0307472_10144083213300032205Hardwood Forest SoilALFHTPEAVAAAKHAGADALVGKESFVSGLRQALANIFPARA
Ga0307472_10264336123300032205Hardwood Forest SoilAKPSAPAVVALALFHTPETVAAAKRAGADALVGKESFVVGLRQALQNLFPAAA
Ga0247830_1064495533300033551SoilPDILLVDLGTVCGLETVRRVKAAARPPRVVAMTLFHTPQAAAAAARAGADALIGKERFVVGLRDALARLFP
Ga0364929_0256023_479_5893300034149SedimentEAAAEARRAGADALVGKEAFVSGLNQALAKLFPAAA
Ga0373958_0053804_647_8563300034819Rhizosphere SoilLGLPPRRGLEFVRRLKALPGGPAVVAMTLFHTPEAAAEARRAGADALVGKEAFVAGLNQALERLFPAAR

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