Sample Metadata
3300035362
General
| Taxon Oid |
3300035362
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Gut microbial communities from Plutella xylostella in Fujian, Fuzhou, China |
| Genome Name Sample Name |
Midgut microbial communities from Plutella xylostella in Fujian, Fuzhou, China - larva |
| Img Genome Id |
3300035362 |
Project / Publication
| Gold Analysis Project Id |
Ga0247288
|
| Gold Sequencing Project Id |
Gp0289913
|
| Gold Study Id |
Gs0133368
|
| Is Published |
0 |
| Add Date |
11/19/2019 |
| Public Release Date |
02/23/2022 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Midgut |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Unclassified |
| Habitat |
Midgut |
Sampling / Conditions
| Geographic Location |
China: Fujian, Fuzhou |
| Isolation Country |
8719 |
| Latitude |
26.08 |
| Longitude |
119.28 |
| Sample Collection Date |
2012/6/1 |
Assembly
| Genome Size Assembled |
20860494 |
| Gene Count Assembled |
32736 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Assembly Method |
Custom JGI assembly v. Nielsen et. al. |
| Comments |
Updating visibility of taxon created using public NCBI SRA data from private to public -- IMGSUPP-3620 |
| Cultured |
0 |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
1 |
| Host Name |
Plutella xylostella |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.5.0.3 |
| Img Submission Id |
214158 |
| In File |
Yes |
| Isolation |
midgut |
| Ncbi Bioproject Accession |
PRJNA187560 |
| Ncbi Biosample Accession |
SAMN02787195 |
| Rnd Project |
1 |
| Sequencing Center |
Fujian Academy of Agricultural Sciences |
| Sequencing Method |
Illumina HiSeq 2000 |
| Submission Type |
Primary |