Sample Metadata
3300030930
General
| Taxon Oid |
3300030930
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Dolichoderus ant bacterial communities |
| Genome Name Sample Name |
Ant gut bacterial community from Pseudomyrmex nigropilosus larvae, the Area de Conservación Guanacaste, Costa Rica - colony BER0554 |
| Img Genome Id |
3300030930 |
Project / Publication
| Gold Analysis Project Id |
Ga0316159
|
| Gold Sequencing Project Id |
Gp0333642
|
| Gold Study Id |
Gs0135673
|
| Is Published |
0 |
| Add Date |
10/27/2018 |
| Public Release Date |
03/04/2022 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Gut |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Unclassified |
| Habitat |
ant gut |
Sampling / Conditions
| Geographic Location |
Costa Rica: the Area de Conservación Guanacaste |
| Isolation Country |
8723 |
| Latitude |
10.8 |
| Longitude |
-85.6 |
Assembly
| Genome Size Assembled |
23822153 |
| Gene Count Assembled |
29401 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
Yi Hu |
| Assembly Method |
IDBA v. 1.1.1 |
| Comments |
released by JGI data releasing policy |
| Contact Email |
[email protected] |
| Contact Name |
Yi Hu |
| Cultured |
0 |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
1 |
| Host Name |
Pseudomyrmex nigropilosus |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.4.16.5 |
| Img Submission Id |
200618 |
| In File |
Yes |
| Isolation |
dissected meconia of Pseudomyrmex nigropilosus larvae |
| Rnd Project |
1 |
| Sequencing Center |
University of Chicago |
| Sequencing Method |
Illumina MiSeq |
| Submission Type |
Primary |
| Submitter Name |
Yi Hu |