Sample Metadata
3300024582
General
| Taxon Oid |
3300024582
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Termite guts microbial communities from Mau, Uttar Pradesh, India |
| Genome Name Sample Name |
Termite guts microbial communities from Mau, Uttar Pradesh, India - S1 |
| Img Genome Id |
3300024582 |
Project / Publication
| Gold Analysis Project Id |
Ga0265387
|
| Gold Sequencing Project Id |
Gp0306281
|
| Gold Study Id |
Gs0134287
|
| Is Published |
0 |
| Add Date |
04/03/2018 |
| Public Release Date |
03/04/2022 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Gut |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Unclassified |
| Habitat |
Termite gut |
Sampling / Conditions
| Geographic Location |
India: Uttar Pradesh, Mau |
| Isolation Country |
8761 |
| Latitude |
25.9496 |
| Longitude |
83.5586 |
| Sample Collection Date |
2017/8/21 |
Assembly
| Genome Size Assembled |
311587646 |
| Gene Count Assembled |
508780 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
Arjun Singh |
| Assembly Method |
Metaspades v. 3.11 |
| Comments |
released by JGI data releasing policy |
| Contact Email |
[email protected] |
| Contact Name |
Arjun Singh |
| Cultured |
0 |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
0 |
| Host Name |
Termitoidae |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.4.16.2 |
| Img Submission Id |
183733 |
| In File |
Yes |
| Isolation |
Termite gut |
| Rnd Project |
1 |
| Sequencing Center |
National Bureau of Agriculturally Important Microorganisms, Indian Council of Agricultural Research |
| Sequencing Method |
Illumina MiSeq |
| Submission Type |
Primary |
| Submitter Name |
Arjun Singh |