Sample Metadata
3300005485
General
| Taxon Oid |
3300005485
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Nasutitermes gut microbial communities from Costa Rica |
| Genome Name Sample Name |
Termite gut microbial communities from Costa Rica - P3 luminal contents |
| Img Genome Id |
3300005485 |
Project / Publication
| Gold Analysis Project Id |
Ga0074263
|
| Gold Sequencing Project Id |
Gp0052206
|
| Gold Study Id |
Gs0056653
|
| Pubmed Id |
18033299 |
| Is Published |
1 |
| Add Date |
08/07/2015 |
| Public Release Date |
03/25/2022 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Hindgut |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Paunch/P3 segment |
| Habitat |
Nasutitermes gut |
Sampling / Conditions
| Geographic Location |
Costa Rica: Siquirres |
| Isolation Country |
8723 |
| Latitude |
10.11 |
| Longitude |
-83.51 |
Assembly
| Genome Size Assembled |
53507758 |
| Gene Count Assembled |
85468 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
Phil Hugenholtz |
| Assembly Method |
Phrap v. Unknown |
| Comments |
released based on JGI ITS |
| Contact Email |
[email protected] |
| Contact Name |
Phil Hugenholtz |
| Cultured |
0 |
| Elevation In Meters |
310.000000 |
| Funding Agency |
E; D; O |
| Funding Program |
LSP |
| Funding Year |
2007 |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
1 |
| Host Name |
Nasutitermes |
| Img Submission Id |
65895 |
| In File |
Yes |
| Isolation |
Termite gut |
| Pmo Project Id |
400226 |
| Rnd Project |
1 |
| Sequencing Center |
DOE Joint Genome Institute (JGI) |
| Sequencing Quality |
Level 6: Finished |
| Submission Type |
Primary |
| Submitter Name |
Phil Hugenholtz |