Sample Metadata
3300000062
General
| Taxon Oid |
3300000062
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Draft |
| Study Name |
Passalidae beetle gut microbial communities from Costa Rica |
| Genome Name Sample Name |
Passalidae beetle gut microbial communities from Costa Rica -Larvae (1ML+1BSL) |
| Img Genome Id |
3300000062 |
Project / Publication
| Gold Analysis Project Id |
Ga0026038
|
| Gold Sequencing Project Id |
Gp0054012
|
| Gold Study Id |
Gs0050939
|
| Is Published |
0 |
| Add Date |
04/07/2012 |
| Public Release Date |
01/22/2022 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Gut |
| Ecosystem Type |
Larva |
| Specific Ecosystem |
Unclassified |
| Habitat |
Passalidae beetle gut |
Sampling / Conditions
| Geographic Location |
Quebrada Gonzales Sector, Braulio Carrillo National Park, Costa Rica |
| Isolation Country |
8723 |
| Latitude |
10.2072 |
| Longitude |
-84.0077 |
| Sample Collection Date |
2010/11/22 |
Assembly
| Genome Size Assembled |
511653920 |
| Gene Count Assembled |
1063212 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
David Sherman |
| Assembly Method |
SOAPdenovo, Newbler, Minimus2 |
| Comments |
released based on JGI ITS |
| Contact Email |
[email protected] |
| Contact Name |
David Sherman |
| Cultured |
0 |
| Funding Program |
CSP-ICBG |
| Funding Year |
2011 |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
1 |
| Host Name |
Veturius |
| Img Submission Id |
7179 |
| In File |
Yes |
| Isolation |
Quebrada Gonzales Sector, Braulio Carrillo National Park, Costa Rica |
| Ncbi Bioproject Accession |
PRJNA337864 |
| Ncbi Biosample Accession |
SAMN05518510 |
| Pmo Project Id |
404336 |
| Rnd Project |
1 |
| Sequencing Center |
DOE Joint Genome Institute (JGI) |
| Sequencing Method |
Illumina HiSeq 2000 |
| Submission Type |
Primary |
| Submitter Name |
Stephanie Malfatti |