Sample Metadata
2684622742
General
| Taxon Oid |
2684622742
|
| Ncbi Domain |
Archaea |
| Sequencing Status |
Permanent Draft |
| Study Name |
Sequencing of Methanobrevibacter genomes |
| Genome Name Sample Name |
Methanobrevibacter curvatus DSM11111 |
| Img Genome Id |
2684622742 |
Taxonomy
| Ncbi Phylum |
Methanobacteriota |
| Ncbi Class |
Methanobacteria |
| Ncbi Order |
Methanobacteriales |
| Ncbi Family |
Methanobacteriaceae |
| Ncbi Genus |
Methanobrevibacter |
| Ncbi Species |
Methanobrevibacter curvatus |
Project / Publication
| Gold Analysis Project Id |
Ga0126275
|
| Gold Sequencing Project Id |
Gp0146557
|
| Gold Study Id |
Gs0120329
|
| Pubmed Id |
27340077 |
| Is Published |
1 |
| Add Date |
07/12/2016 |
| Public Release Date |
07/12/2016 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Gut |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Unclassified |
Sampling / Conditions
| Geographic Location |
USA, Michigan, Dansville |
| Isolation Country |
8855 |
Assembly
| Genome Size Assembled |
2380562 |
| Gene Count Assembled |
2007 |
| Sequencing Strategy |
Whole Genome Sequencing |
Other Metadata
| Ani Cluster Id |
13612 |
| Ani Cluster Type |
singleton |
| Assembly Method |
SPAdes v. 3.7.0 |
| Culture Type |
Isolate |
| Cultured |
1 |
| Genbank Anomalous Assembly |
No |
| Gold Analysis Project Type |
Genome Analysis (Isolate) |
| Gtdb Class |
Methanobacteria |
| Gtdb Domain |
Archaea |
| Gtdb Family |
Methanobacteriaceae |
| Gtdb Genus |
Methanobrevibacter_D |
| Gtdb Order |
Methanobacteriales |
| Gtdb Phylum |
Methanobacteriota |
| Gtdb Species |
Methanobrevibacter_D curvatus |
| Has Coverage |
0 |
| High Quality |
1 |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.4.11.4 |
| Img Submission Id |
90865 |
| In File |
No |
| Isolation |
hindgut of subterranean termite, Reticulitermes flavipes |
| Ncbi Assembly Accession |
GCA_001639295.1 |
| Ncbi Bioproject Accession |
PRJNA318764 |
| Ncbi Biosample Accession |
SAMN04867343 |
| Ncbi Genbank Id |
LWMV00000000 |
| Ncbi Strain |
DSM11111 |
| Ncbi Taxon Id |
49547 |
| Rnd Project |
1 |
| Sequencing Center |
Goettingen Genomics Laboratory |
| Sequencing Method |
Illumina, Illumina MiSeq |
| Sequencing Quality |
Level 2: High-Quality Draft |
| Sequencing Stat |
Complete |
| Submission Type |
Primary |
| Submitter Name |
IMG ER Submission Pipeline |
| Type Strain |
Yes |