Sample Metadata
2228664018
General
| Taxon Oid |
2228664018
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Termite hindgut microbial communities from Amitermes wheeleri in the Arizona desert and from Nasutitermes corniger in Florida, USA |
| Genome Name Sample Name |
Amitermes wheeleri hindgut microbial communities from Arizona, USA - 3 |
| Img Genome Id |
2228664018 |
Project / Publication
| Gold Analysis Project Id |
Ga0011244
|
| Gold Sequencing Project Id |
Gp0051810
|
| Gold Study Id |
Gs0045332
|
| Pubmed Id |
23593407 |
| Is Published |
1 |
| Add Date |
11/20/2011 |
| Public Release Date |
07/06/2012 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Hindgut |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Paunch/P3 segment |
| Habitat |
Termite hindgut |
Sampling / Conditions
| Geographic Location |
USA: Arizona |
| Isolation Country |
8855 |
| Latitude |
31.519 |
| Longitude |
-110.001 |
| Sample Collection Date |
2008/7/23 |
Assembly
| Genome Size Assembled |
107774793 |
| Gene Count Assembled |
263198 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
Phil Hugenholtz |
| Assembly Method |
Velvet, Newbler, Phrap |
| Contact Email |
[email protected] |
| Contact Name |
Phil Hugenholtz |
| Cultured |
0 |
| Elevation In Meters |
1500.000000 |
| Funding Agency |
DOE |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
0 |
| Host Name |
Amitermes |
| Img Submission Id |
6527 |
| In File |
Yes |
| Isolation |
P3 hindgut segment of Amitermes wheeleri in Arizona |
| Rnd Project |
1 |
| Sequencing Center |
DOE Joint Genome Institute (JGI) |
| Sequencing Method |
454 GS FLX Titanium, Illumina GAIIx, Sanger |
| Submission Type |
Primary |
| Submitter Name |
Shaomei He |